Contents

# AAI

[![Build Status](https://travis-ci.org/mooreryan/aai.svg?branch=master)](https://travis-ci.org/mooreryan/aai)
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[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT)

Calculate Seanie's multi-genome (or genome bin) amino acid similarity.

## Installation

Add this line to your application's Gemfile:

```ruby
gem 'aai'
```

And then execute:

    $ bundle

Or install it yourself as:

    $ gem install aai

## Requirements

- GNU Parallel
- NCBI Blast suite

## Usage

TODO: Write usage instructions here

## Development

After checking out the repo, run `bin/setup` to install dependencies. Then, run `rake spec` to run the tests. You can also run `bin/console` for an interactive prompt that will allow you to experiment.

To install this gem onto your local machine, run `bundle exec rake install`. To release a new version, update the version number in `version.rb`, and then run `bundle exec rake release`, which will create a git tag for the version, push git commits and tags, and push the `.gem` file to [rubygems.org](https://rubygems.org).

## Contributing

Bug reports and pull requests are welcome on GitHub at https://github.com/[USERNAME]/aai. This project is intended to be a safe, welcoming space for collaboration, and contributors are expected to adhere to the [Contributor Covenant](http://contributor-covenant.org) code of conduct.

Version data entries

1 entries across 1 versions & 1 rubygems

Version	Path
aai-0.1.0	README.md