##fileformat=VCFv4.1
##FORMAT=<ID=AD,Number=.,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth (reads with MQ=255 or with bad mates are filtered)">
##FORMAT=<ID=GQ,Number=1,Type=Float,Description="Genotype Quality">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Normalized, Phred-scaled likelihoods for genotypes as defined in the VCF specification">
##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
##INFO=<ID=BaseQRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt Vs. Ref base qualities">
##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth; some reads may have been filtered">
##INFO=<ID=DS,Number=0,Type=Flag,Description="Were any of the samples downsampled?">
##INFO=<ID=Dels,Number=1,Type=Float,Description="Fraction of Reads Containing Spanning Deletions">
##INFO=<ID=FS,Number=1,Type=Float,Description="Phred-scaled p-value using Fisher's exact test to detect strand bias">
##INFO=<ID=HRun,Number=1,Type=Integer,Description="Largest Contiguous Homopolymer Run of Variant Allele In Either Direction">
##INFO=<ID=HaplotypeScore,Number=1,Type=Float,Description="Consistency of the site with at most two segregating haplotypes">
##INFO=<ID=InbreedingCoeff,Number=1,Type=Float,Description="Inbreeding coefficient as estimated from the genotype likelihoods per-sample when compared against the Hardy-Weinberg expectation">
##INFO=<ID=MQ,Number=1,Type=Float,Description="RMS Mapping Quality">
##INFO=<ID=MQ0,Number=1,Type=Integer,Description="Total Mapping Quality Zero Reads">
##INFO=<ID=MQRankSum,Number=1,Type=Float,Description="Z-score From Wilcoxon rank sum test of Alt vs. Ref read mapping qualities">
##INFO=<ID=QD,Number=1,Type=Float,Description="Variant Confidence/Quality by Depth">
##INFO=<ID=ReadPosRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt vs. Ref read position bias">
##INFO=<ID=SB,Number=1,Type=Float,Description="Strand Bias">
##UnifiedGenotyper="analysis_type=UnifiedGenotyper input_file=[pI1_realigned.bam, pI2_realigned.bam, pKP048_realigned.bam, pKPHS2_realigned.bam, pKPN-IT_realigned.bam, pKPN3_realigned.bam, pKPN4_realigned.bam, pKPQIL-IT_realigned.bam, pKpQIL_realigned.bam, pL27_realigned.bam, pL33_realigned.bam, pL38_realigned.bam, pLENT_realigned.bam, pLESC_realigned.bam, pT13_realigned.bam, pT27_realigned.bam, pT4_realigned.bam, pT6_realigned.bam, pT8_realigned.bam, pUUH239_realigned.bam, pc15_realigned.bam] read_buffer_size=null phone_home=STANDARD gatk_key=null read_filter=[] intervals=null excludeIntervals=null interval_set_rule=UNION interval_merging=ALL reference_sequence=pKpQIL.fasta nonDeterministicRandomSeed=false downsampling_type=BY_SAMPLE downsample_to_fraction=null downsample_to_coverage=250 baq=OFF baqGapOpenPenalty=40.0 performanceLog=null useOriginalQualities=false BQSR=null quantize_quals=-1 defaultBaseQualities=-1 validation_strictness=SILENT unsafe=null num_threads=12 num_cpu_threads=null num_io_threads=null num_bam_file_handles=null read_group_black_list=null pedigree=[] pedigreeString=[] pedigreeValidationType=STRICT allow_intervals_with_unindexed_bam=false logging_level=INFO log_to_file=null help=false genotype_likelihoods_model=SNP p_nonref_model=EXACT heterozygosity=0.0010 pcr_error_rate=1.0E-4 genotyping_mode=DISCOVERY output_mode=EMIT_VARIANTS_ONLY standard_min_confidence_threshold_for_calling=30.0 standard_min_confidence_threshold_for_emitting=30.0 noSLOD=false annotateNDA=false alleles=(RodBinding name= source=UNBOUND) min_base_quality_score=17 max_deletion_fraction=0.05 max_alternate_alleles=3 min_indel_count_for_genotyping=5 min_indel_fraction_per_sample=0.25 indel_heterozygosity=1.25E-4 indelGapContinuationPenalty=10 indelGapOpenPenalty=45 indelHaplotypeSize=80 noBandedIndel=false indelDebug=false ignoreSNPAlleles=false dbsnp=(RodBinding name= source=UNBOUND) comp=[] out=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub NO_HEADER=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub sites_only=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub debug_file=null metrics_file=null annotation=[] excludeAnnotation=[] filter_mismatching_base_and_quals=false"
##contig=<ID=gi|293339394|gb|GU595196.1|,length=113637>
##reference=file:///Volumes/NGS2_DataRAID/projects/ali/GAS/Michele_stuff/pKpQIL.fasta
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	plasmid1	plasmid2	plasmid3	plasmid4	plasmid5	plasmid6	plasmid7	plasmid8	plasmid9	plasmid10	plasmid11	plasmid12	plasmid13	plasmid14	plasmid15	plasmid16	plasmid17	plasmid18	plasmid19	plasmid20	plasmid21
gi|293339394|gb|GU595196.1|	222	.	G	A	5011.26	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.514;DP=2027;Dels=0.00;FS=6.458;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.755;QD=41.76;ReadPosRankSum=0.846;SB=-1336.35	GT:AD:DP:GQ:PL	0/0:123,0:123:99:0,370,5137	0/0:144,0:144:99:0,433,6013	0/0:102,0:102:99:0,307,4260	1/1:0,120:120:99:5011,361,0	./.	./.	./.	0/0:129,0:129:99:0,388,5387	0/0:112,0:112:99:0,337,4677	0/0:144,0:144:99:0,433,6013	0/0:140,0:140:99:0,421,5846	0/0:134,0:134:99:0,403,5596	0/0:149,0:149:99:0,448,6222	0/0:124,0:124:99:0,373,5178	0/0:121,0:121:99:0,364,5053	0/0:112,0:112:99:0,337,4677	0/0:100,0:100:99:0,301,4176	0/0:141,0:141:99:0,424,5888	0/0:132,0:132:99:0,397,5512	./.	./.
gi|293339394|gb|GU595196.1|	338	.	G	T	7767.44	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.010;DP=2745;Dels=0.00;FS=4.407;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.376;QD=41.76;ReadPosRankSum=0.410;SB=-3716.69	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:134,0:134:99:0,403,5596	1/1:0,186:186:99:7767,560,0	./.	./.	./.	0/0:162,0:162:99:0,488,6765	0/0:201,0:201:99:0,605,8394	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	./.	./.
gi|293339394|gb|GU595196.1|	340	.	A	G	7683.92	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.314;DP=2731;Dels=0.00;FS=3.079;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.054;QD=41.76;ReadPosRankSum=0.110;SB=-3716.69	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:136,0:136:99:0,409,5679	1/1:0,184:184:99:7684,554,0	./.	./.	./.	0/0:161,0:161:99:0,485,6723	0/0:200,0:200:99:0,602,8352	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:181,0:181:99:0,545,7559	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:186,0:186:99:0,560,7767	0/0:178,0:178:99:0,536,7433	0/0:169,0:169:99:0,509,7057	./.	./.
gi|293339394|gb|GU595196.1|	503	.	C	T	7558.64	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.058;DP=2649;Dels=0.00;FS=7.208;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.062;QD=41.76;ReadPosRankSum=1.651;SB=-3507.89	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:149,0:149:99:0,448,6222	0/0:136,0:136:99:0,409,5679	1/1:0,181:181:99:7559,545,0	./.	./.	./.	0/0:142,0:142:99:0,427,5930	0/0:198,0:198:99:0,596,8269	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	0/0:185,0:185:99:0,557,7726	0/0:186,0:186:99:0,560,7767	0/0:154,0:154:99:0,464,6431	0/0:162,0:162:99:0,488,6765	0/0:185,0:185:99:0,557,7726	0/0:144,0:144:99:0,433,6013	0/0:174,0:174:99:0,524,7266	./.	./.
gi|293339394|gb|GU595196.1|	841	.	A	G	153.54	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.484;DP=2468;Dels=0.00;FS=12.058;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9836;MQ=254.00;MQ0=0;MQRankSum=-0.258;QD=30.71;ReadPosRankSum=-3.629;SB=-0.02	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:145,0:145:99:0,436,6055	1/1:0,5:5:15.05:209,15,0	0/0:158,0:158:99:0,476,6598	./.	./.	./.	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	0/0:161,0:161:99:0,485,6723	0/0:156,0:156:99:0,470,6515	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:175,0:175:99:0,527,7308	./.	./.
gi|293339394|gb|GU595196.1|	842	.	G	T	35.75	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.834;DP=2482;Dels=0.00;FS=3.012;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8823;MQ=254.00;MQ0=0;MQRankSum=0.097;QD=17.88;ReadPosRankSum=-2.336;SB=-0.02	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:150,0:150:99:0,452,6264	1/1:0,2:2:6.02:84,6,0	0/0:160,0:160:99:0,482,6682	./.	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	./.	./.
gi|293339394|gb|GU595196.1|	1071	.	C	T	7475.12	.	AC=2;AF=0.067;AN=30;BaseQRankSum=-1.894;DP=2545;Dels=0.00;FS=6.089;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.440;QD=41.76;ReadPosRankSum=-0.344;SB=-3507.89	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:145,0:145:99:0,436,6055	./.	1/1:0,179:179:99:7475,539,0	./.	./.	./.	0/0:191,0:191:99:0,575,7976	0/0:167,0:167:99:0,503,6974	0/0:191,0:191:99:0,575,7976	0/0:154,0:154:99:0,464,6431	0/0:161,0:161:99:0,485,6723	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:184,0:184:99:0,554,7684	0/0:158,0:158:99:0,476,6598	0/0:155,0:155:99:0,467,6473	0/0:181,0:181:99:0,545,7559	./.	./.
gi|293339394|gb|GU595196.1|	1355	.	T	C	316.39	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.119;DP=2516;Dels=0.00;FS=24.144;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9990;MQ=254.00;MQ0=0;MQRankSum=1.461;QD=35.15;ReadPosRankSum=-4.832;SB=-0.02	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:178,0:178:99:0,536,7433	./.	0/0:156,0:156:99:0,470,6515	./.	./.	./.	0/0:154,0:154:99:0,464,6431	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:154,0:154:99:0,464,6431	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	0/0:183,0:183:99:0,551,7642	0/0:194,0:194:99:0,584,8102	./.	1/1:0,9:9:27.09:376,27,0
gi|293339394|gb|GU595196.1|	1356	.	G	C	399.55	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.423;DP=2511;Dels=0.00;FS=33.343;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=0.590;QD=36.32;ReadPosRankSum=-4.909;SB=-0.02	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:183,0:183:99:0,551,7642	./.	0/0:155,0:155:99:0,467,6473	./.	./.	./.	0/0:152,0:152:99:0,458,6348	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	0/0:156,0:156:99:0,470,6515	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:159,0:159:99:0,479,6640	0/0:160,0:160:99:0,482,6682	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:191,0:191:99:0,575,7976	./.	1/1:0,11:11:33.11:459,33,0
gi|293339394|gb|GU595196.1|	2111	.	G	C	14908.46	.	AC=4;AF=0.125;AN=32;BaseQRankSum=1.173;DP=2755;Dels=0.00;FS=2.149;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.101;QD=41.76;ReadPosRankSum=0.219;SB=-7224.56	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:177,0:177:99:0,533,7392	./.	1/1:0,166:166:99:6932,500,0	./.	./.	./.	0/0:155,0:155:99:0,467,6473	0/0:161,0:161:99:0,485,6723	0/0:181,0:181:99:0,545,7559	0/0:172,0:172:99:0,518,7183	0/0:152,0:152:99:0,458,6348	0/0:187,0:187:99:0,563,7809	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	0/0:183,0:183:99:0,551,7642	./.	1/1:0,191:191:99:7976,575,0
gi|293339394|gb|GU595196.1|	2174	.	C	T	14365.57	.	AC=4;AF=0.125;AN=32;BaseQRankSum=-0.569;DP=2711;Dels=0.00;FS=11.339;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.126;QD=41.76;ReadPosRankSum=0.910;SB=-6681.67	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:179,0:179:99:0,539,7475	./.	1/1:0,165:165:99:6890,497,0	./.	./.	./.	0/0:195,0:195:99:0,587,8143	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:151,0:151:99:0,455,6306	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:176,0:176:99:0,530,7350	0/0:152,0:152:99:0,458,6348	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	0/0:157,0:157:99:0,473,6556	0/0:197,0:197:99:0,593,8227	./.	1/1:0,179:179:99:7475,539,0
gi|293339394|gb|GU595196.1|	2279	.	A	C	14282.05	.	AC=4;AF=0.125;AN=32;BaseQRankSum=-1.344;DP=2685;Dels=0.00;FS=0.205;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.570;QD=41.76;ReadPosRankSum=0.509;SB=-7015.75	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	./.	1/1:0,160:160:99:6682,482,0	./.	./.	./.	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	0/0:182,0:182:99:0,548,7600	0/0:178,0:178:99:0,536,7433	0/0:162,0:162:99:0,488,6765	0/0:158,0:158:99:0,476,6598	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	./.	1/1:0,182:182:99:7600,548,0
gi|293339394|gb|GU595196.1|	2393	.	C	A	91.48	.	AC=6;AF=0.158;AN=38;BaseQRankSum=0.816;DP=2657;Dels=0.00;FS=12.455;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8048;MQ=254.00;MQ0=0;MQRankSum=0.025;QD=22.87;ReadPosRankSum=-1.811;SB=-0.02	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:161,0:161:99:0,485,6723	./.	0/0:93,0:93:99:0,280,3884	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:162,0:162:99:0,488,6765	0/0:180,0:180:99:0,542,7517	0/0:168,0:168:99:0,506,7016	0/0:145,0:145:99:0,436,6055	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:158,0:158:99:0,476,6598	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	0/0:186,0:186:99:0,560,7767	./.	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	2405	.	A	C	368.59	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-1.171;DP=2680;Dels=0.00;FS=34.878;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9404;MQ=254.00;MQ0=0;MQRankSum=-1.240;QD=33.51;ReadPosRankSum=-1.040;SB=-0.01	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:164,0:164:99:0,494,6849	./.	0/0:86,0:86:99:0,259,3591	1/1:0,4:4:12.04:167,12,0	1/1:0,2:2:6.02:84,6,0	1/1:0,5:5:15.05:209,15,0	0/0:166,0:166:99:0,500,6932	0/0:181,0:181:99:0,545,7559	0/0:169,0:169:99:0,509,7057	0/0:150,0:150:99:0,452,6264	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	./.	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	2445	.	T	C	1375.56	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.494;DP=2706;Dels=0.00;FS=108.274;HRun=0;HaplotypeScore=0.9999;InbreedingCoeff=0.9925;MQ=254.00;MQ0=0;MQRankSum=0.875;QD=39.30;ReadPosRankSum=5.370;SB=0.84	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	1/1:0,27:27:81.27:1128,81,0	0/0:95,0:95:99:0,286,3967	0/0:6,0:6:18.06:0,18,251	0/0:7,0:7:21.07:0,21,292	0/0:12,0:12:36.12:0,36,501	0/0:186,0:186:99:0,560,7767	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	0/0:153,0:153:99:0,461,6389	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:150,0:150:99:0,452,6264	0/0:173,0:173:99:0,521,7225	0/0:151,0:151:99:0,455,6306	0/0:190,0:190:99:0,572,7934	0/0:160,0:160:99:0,482,6682	1/1:0,8:8:24.08:334,24,0	0/0:207,0:207:99:0,623,8644
gi|293339394|gb|GU595196.1|	2450	.	T	G	2918.99	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.094;DP=2732;Dels=0.00;FS=227.641;HRun=1;HaplotypeScore=0.9999;InbreedingCoeff=0.9902;MQ=254.00;MQ0=0;MQRankSum=-1.145;QD=39.99;ReadPosRankSum=0.401;SB=2.26	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	1/1:0,32:32:96.32:1336,96,0	0/0:92,0:92:99:0,277,3842	1/1:0,4:4:12.04:167,12,0	1/1:0,6:6:18.06:251,18,0	1/1:0,12:12:36.12:501,36,0	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:140,0:140:99:0,421,5846	0/0:177,0:177:99:0,533,7392	0/0:148,0:148:99:0,445,6181	0/0:186,0:186:99:0,560,7767	0/0:171,0:171:99:0,515,7141	1/1:0,19:19:57.19:793,57,0	0/0:213,0:213:99:0,641,8895
gi|293339394|gb|GU595196.1|	2480	.	C	G	2754.38	.	AC=10;AF=0.238;AN=42;BaseQRankSum=1.376;DP=2755;Dels=0.00;FS=221.600;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9774;MQ=254.00;MQ0=0;MQRankSum=1.123;QD=39.92;ReadPosRankSum=3.947;SB=2.16	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:164,0:164:99:0,494,6849	1/1:0,26:26:78.26:1086,78,0	0/0:96,0:96:99:0,289,4009	1/1:0,4:4:12.04:167,12,0	1/1:0,3:3:9.03:125,9,0	1/1:0,12:12:36.12:501,36,0	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	0/0:161,0:161:99:0,485,6723	0/0:192,0:192:99:0,578,8018	0/0:177,0:177:99:0,533,7392	0/0:181,0:181:99:0,545,7559	0/0:158,0:158:99:0,476,6598	0/0:182,0:182:99:0,548,7600	0/0:142,0:142:99:0,427,5930	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	1/1:0,24:24:72.24:1002,72,0	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	2520	.	T	C	137.08	.	AC=3;AF=0.075;AN=40;BaseQRankSum=-0.486;DP=2690;Dels=0.00;FS=9.355;HRun=4;HaplotypeScore=0.2500;InbreedingCoeff=-0.0907;MQ=254.00;MQ0=0;MQRankSum=-1.163;QD=8.57;ReadPosRankSum=-3.550;SB=-31.42	GT:AD:DP:GQ:PL	0/0:145,0:145:99:0,436,6055	0/0:176,0:176:99:0,530,7350	0/1:3,3:6:99:107,0,107	0/0:65,0:65:99:0,196,2714	./.	0/1:1,1:2:35.74:36,0,36	0/0:1,0:1:3.01:0,3,42	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:154,0:154:99:0,464,6431	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:179,0:179:99:0,539,7475	0/0:183,0:183:99:0,551,7642	0/0:163,0:163:99:0,491,6807	0/0:186,0:186:99:0,560,7767	0/0:179,0:179:99:0,539,7475	0/0:190,0:190:99:0,572,7934	0/0:175,0:175:99:0,527,7308	0/1:6,2:8:59.44:59,0,226	0/0:200,0:200:99:0,602,8352
gi|293339394|gb|GU595196.1|	2525	.	G	C	33.77	.	AC=2;AF=0.050;AN=40;BaseQRankSum=1.601;DP=2686;Dels=0.00;FS=9.310;HRun=4;HaplotypeScore=0.2500;InbreedingCoeff=-0.0713;MQ=254.00;MQ0=0;MQRankSum=0.886;QD=2.81;ReadPosRankSum=-2.948;SB=0.96	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:179,0:179:99:0,539,7475	0/1:7,2:9:56.43:56,0,265	0/0:55,0:55:99:0,166,2297	./.	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:178,0:178:99:0,536,7433	0/0:160,0:160:99:0,482,6682	0/0:183,0:183:99:0,551,7642	0/0:182,0:182:99:0,548,7600	0/0:181,0:181:99:0,545,7559	0/0:170,0:170:99:0,512,7099	0/1:2,1:3:32.73:33,0,74	0/0:212,0:212:99:0,638,8853
gi|293339394|gb|GU595196.1|	2530	.	C	T	273.43	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-2.114;DP=2652;Dels=0.00;FS=24.578;HRun=0;HaplotypeScore=0.1905;InbreedingCoeff=0.6736;MQ=254.00;MQ0=0;MQRankSum=0.612;QD=34.18;ReadPosRankSum=-3.068;SB=1.15	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:183,0:183:99:0,551,7642	0/0:12,0:12:36.12:0,36,501	0/0:43,0:43:99:0,129,1796	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:2,0:2:6.02:0,6,84	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:179,0:179:99:0,539,7475	0/0:178,0:178:99:0,536,7433	0/0:162,0:162:99:0,488,6765	0/0:187,0:187:99:0,563,7809	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	1/1:0,8:8:24.08:334,24,0	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	2556	.	A	G	73.52	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.243;DP=2554;Dels=0.00;FS=9.388;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.8094;MQ=254.00;MQ0=0;MQRankSum=-0.894;QD=24.51;ReadPosRankSum=-2.729;SB=0.13	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:162,0:162:99:0,488,6765	0/0:25,0:25:75.25:0,75,1044	1/1:0,3:3:9.03:125,9,0	0/0:3,0:3:9.03:0,9,125	0/0:3,0:3:9.03:0,9,125	0/0:4,0:4:12.04:0,12,167	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:156,0:156:99:0,470,6515	0/0:167,0:167:99:0,503,6974	0/0:182,0:182:99:0,548,7600	0/0:186,0:186:99:0,560,7767	0/0:161,0:161:99:0,485,6723	0/0:143,0:143:99:0,430,5972	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	0/0:22,0:22:66.22:0,66,919	0/0:190,0:190:99:0,572,7934
gi|293339394|gb|GU595196.1|	2557	.	A	G	34.58	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.006;DP=2557;Dels=0.00;FS=6.184;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.7568;MQ=254.00;MQ0=0;MQRankSum=-0.797;QD=17.29;ReadPosRankSum=-2.385;SB=0.12	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:25,0:25:75.25:0,75,1044	1/1:0,2:2:6.02:84,6,0	0/0:3,0:3:9.03:0,9,125	0/0:3,0:3:9.03:0,9,125	0/0:4,0:4:12.04:0,12,167	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:185,0:185:99:0,557,7726	0/0:161,0:161:99:0,485,6723	0/0:144,0:144:99:0,433,6013	0/0:157,0:157:99:0,473,6556	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:22,0:22:66.22:0,66,919	0/0:190,0:190:99:0,572,7934
gi|293339394|gb|GU595196.1|	2583	.	G	A	51.64	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.076;DP=2592;Dels=0.00;FS=9.403;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.7714;MQ=254.00;MQ0=0;MQRankSum=-0.009;QD=17.21;ReadPosRankSum=-1.962;SB=-0.01	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:32,0:32:96.32:0,96,1336	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	0/0:152,0:152:99:0,458,6348	0/0:168,0:168:99:0,506,7016	0/0:188,0:188:99:0,566,7851	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:184,0:184:99:0,554,7684	0/0:160,0:160:99:0,482,6682	0/0:159,0:159:99:0,479,6640	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:147,0:147:99:0,442,6139	0/0:22,0:22:66.22:0,66,919	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	2603	.	A	C	9730.18	.	AC=6;AF=0.176;AN=34;BaseQRankSum=1.468;DP=2569;Dels=0.00;FS=2.001;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.385;QD=41.76;ReadPosRankSum=0.031;SB=-4758.22	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	1/1:0,25:25:75.25:1044,75,0	./.	./.	./.	./.	0/0:160,0:160:99:0,482,6682	0/0:160,0:160:99:0,482,6682	0/0:179,0:179:99:0,539,7475	0/0:182,0:182:99:0,548,7600	0/0:159,0:159:99:0,479,6640	0/0:188,0:188:99:0,566,7851	0/0:165,0:165:99:0,497,6890	0/0:150,0:150:99:0,452,6264	0/0:160,0:160:99:0,482,6682	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	1/1:0,16:16:48.16:668,48,0	1/1:0,192:192:99:8018,578,0
gi|293339394|gb|GU595196.1|	2634	.	C	A,T	9563.14	.	AC=4,4;AF=0.111,0.111;AN=36;BaseQRankSum=0.026;DP=2499;Dels=0.00;FS=6.026;HaplotypeScore=0.0000;InbreedingCoeff=0.8561;MQ=254.00;MQ0=0;MQRankSum=0.419;QD=41.76;ReadPosRankSum=-0.607;SB=-4468.37	GT:AD:DP:GQ:PL	0/0:147,0,0:147:99:0,442,6139,442,6139,6139	0/0:158,0,0:158:99:0,476,6598,476,6598,6598	2/2:0,0,1:1:3.01:42,42,42,3,3,0	1/1:0,15,0:15:45.15:626,45,0,626,45,626	./.	./.	./.	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:151,0,0:151:99:0,455,6306,455,6306,6306	0/0:142,0,0:142:99:0,427,5930,427,5930,5930	0/0:185,0,0:185:99:0,557,7726,557,7726,7726	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:179,0,0:179:99:0,539,7475,539,7475,7475	0/0:156,0,0:156:99:0,470,6515,470,6515,6515	0/0:154,0,0:154:99:0,464,6431,464,6431,6431	0/0:141,0,0:141:99:0,424,5888,424,5888,5888	0/0:174,0,0:174:99:0,524,7266,524,7266,7266	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	2/2:0,0,2:2:6.02:84,84,84,6,6,0	1/1:0,211,0:211:99:8811,635,0,8811,635,8811
gi|293339394|gb|GU595196.1|	2654	.	C	A	749.53	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.330;DP=2638;Dels=0.00;FS=1.821;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9977;MQ=254.00;MQ0=0;MQRankSum=-0.529;QD=37.48;ReadPosRankSum=-4.160;SB=-371.62	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	1/1:0,13:13:39.13:543,39,0	0/0:55,0:55:99:0,166,2297	0/0:11,0:11:33.11:0,33,459	0/0:16,0:16:48.16:0,48,668	0/0:29,0:29:87.29:0,87,1211	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:130,0:130:99:0,391,5429	0/0:153,0:153:99:0,461,6389	0/0:153,0:153:99:0,461,6389	0/0:183,0:183:99:0,551,7642	0/0:160,0:160:99:0,482,6682	0/0:168,0:168:99:0,506,7016	0/0:157,0:157:99:0,473,6556	0/0:179,0:179:99:0,539,7475	0/0:177,0:177:99:0,533,7392	0/0:176,0:176:99:0,530,7350	1/1:0,7:7:21.07:292,21,0	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	2670	.	G	A	4593.66	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.188;DP=2804;Dels=0.00;FS=19.422;HRun=0;HaplotypeScore=2.5711;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.878;QD=41.76;ReadPosRankSum=6.104;SB=-1834.91	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	1/1:0,36:36:99:1503,108,0	0/0:96,0:96:99:0,289,4009	1/1:0,11:11:33.11:459,33,0	1/1:0,16:16:48.16:668,48,0	1/1:0,29:29:87.29:1211,87,0	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:160,0:160:99:0,482,6682	0/0:176,0:176:99:0,530,7350	0/0:189,0:189:99:0,569,7893	0/0:150,0:150:99:0,452,6264	0/0:164,0:164:99:0,494,6849	0/0:158,0:158:99:0,476,6598	0/0:182,0:182:99:0,548,7600	0/0:191,0:191:99:0,575,7976	0/0:178,0:178:99:0,536,7433	1/1:0,18:18:54.18:752,54,0	0/0:209,0:209:99:0,629,8728
gi|293339394|gb|GU595196.1|	2676	.	G	T	2233.65	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.450;DP=2850;Dels=0.00;FS=18.167;HRun=0;HaplotypeScore=2.5711;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.807;QD=39.89;ReadPosRankSum=2.785;SB=-833.55	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	0/0:45,0:45:99:0,135,1879	0/0:109,0:109:99:0,328,4552	1/1:0,11:11:33.11:459,33,0	1/1:0,16:16:48.16:668,48,0	1/1:0,29:29:87.29:1211,87,0	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:199,0:199:99:0,599,8310	0/0:161,0:161:99:0,485,6723	0/0:170,0:170:99:0,512,7099	0/0:156,0:156:99:0,470,6515	0/0:167,0:167:99:0,503,6974	0/0:191,0:191:99:0,575,7976	0/0:174,0:174:99:0,524,7266	0/0:21,0:21:63.21:0,63,877	0/0:214,0:214:99:0,644,8937
gi|293339394|gb|GU595196.1|	2757	.	C	T	2797.76	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.904;DP=2613;Dels=0.00;FS=38.703;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.153;QD=40.55;ReadPosRankSum=1.636;SB=-834.19	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	1/1:0,35:35:99:1462,105,0	0/0:90,0:90:99:0,271,3758	./.	./.	./.	0/0:165,0:165:99:0,497,6890	0/0:142,0:142:99:0,427,5930	0/0:149,0:149:99:0,448,6222	0/0:186,0:186:99:0,560,7767	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:147,0:147:99:0,442,6139	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:152,0:152:99:0,458,6348	1/1:0,34:34:99:1420,102,0	0/0:181,0:181:99:0,545,7559
gi|293339394|gb|GU595196.1|	2796	.	A	G	140.76	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.084;DP=2639;Dels=0.00;FS=1.668;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8792;MQ=254.00;MQ0=0;MQRankSum=0.159;QD=28.15;ReadPosRankSum=-3.601;SB=-78.74	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:162,0:162:99:0,488,6765	1/1:0,4:4:12.04:167,12,0	0/0:104,0:104:99:0,313,4343	./.	./.	./.	0/0:183,0:183:99:0,551,7642	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	0/0:186,0:186:99:0,560,7767	0/0:192,0:192:99:0,578,8018	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	0/0:157,0:157:99:0,473,6556	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:143,0:143:99:0,430,5972	1/1:0,1:1:3.01:42,3,0	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	2849	.	G	A	209.36	.	AC=6;AF=0.158;AN=38;BaseQRankSum=0.888;DP=2760;Dels=0.00;FS=21.707;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8809;MQ=254.00;MQ0=0;MQRankSum=-0.498;QD=29.91;ReadPosRankSum=-3.287;SB=-0.02	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	1/1:0,3:3:9.03:125,9,0	0/0:128,0:128:99:0,385,5345	./.	./.	1/1:0,1:1:3.01:42,3,0	0/0:174,0:174:99:0,524,7266	0/0:180,0:180:99:0,542,7517	0/0:193,0:193:99:0,581,8060	0/0:197,0:197:99:0,593,8227	0/0:184,0:184:99:0,554,7684	0/0:181,0:181:99:0,545,7559	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	0/0:145,0:145:99:0,436,6055	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:182,0:182:99:0,548,7600	1/1:0,3:3:9.03:125,9,0	0/0:179,0:179:99:0,539,7475
gi|293339394|gb|GU595196.1|	2857	.	A	C	878.07	.	AC=4;AF=0.111;AN=36;BaseQRankSum=1.297;DP=2762;Dels=0.00;FS=44.831;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9957;MQ=254.00;MQ0=0;MQRankSum=0.309;QD=38.18;ReadPosRankSum=-4.168;SB=-81.07	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	1/1:0,17:17:51.17:710,51,0	0/0:150,0:150:99:0,452,6264	./.	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:188,0:188:99:0,566,7851	0/0:181,0:181:99:0,545,7559	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:142,0:142:99:0,427,5930	0/0:166,0:166:99:0,500,6932	0/0:184,0:184:99:0,554,7684	0/0:166,0:166:99:0,500,6932	1/1:0,6:6:18.06:251,18,0	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	2865	.	T	C	168.39	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.183;DP=2767;Dels=0.00;FS=15.070;HRun=1;HaplotypeScore=0.2857;InbreedingCoeff=0.8620;MQ=254.00;MQ0=0;MQRankSum=-1.067;QD=28.06;ReadPosRankSum=-2.935;SB=-0.02	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:27,0:27:81.27:0,81,1128	0/0:148,0:148:99:0,445,6181	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:181,0:181:99:0,545,7559	0/0:188,0:188:99:0,566,7851	0/0:161,0:161:99:0,485,6723	0/0:159,0:159:99:0,479,6640	0/0:142,0:142:99:0,427,5930	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:170,0:170:99:0,512,7099	0/0:13,0:13:39.13:0,39,543	0/0:182,0:182:99:0,548,7600
gi|293339394|gb|GU595196.1|	2898	.	T	C	3591.41	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.916;DP=2809;Dels=0.00;FS=156.690;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9832;MQ=254.00;MQ0=0;MQRankSum=0.120;QD=41.76;ReadPosRankSum=2.049;SB=-292.34	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	1/1:0,46:46:99:1921,138,0	0/0:170,0:170:99:0,512,7099	1/1:0,3:3:9.03:125,9,0	1/1:0,7:7:21.07:292,21,0	1/1:0,7:7:21.07:292,21,0	0/0:153,0:153:99:0,461,6389	0/0:183,0:183:99:0,551,7642	0/0:157,0:157:99:0,473,6556	0/0:190,0:190:99:0,572,7934	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	0/0:154,0:154:99:0,464,6431	0/0:183,0:183:99:0,551,7642	0/0:142,0:142:99:0,427,5930	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:155,0:155:99:0,467,6473	1/1:0,23:23:69.23:960,69,0	0/0:220,0:220:99:0,662,9187
gi|293339394|gb|GU595196.1|	2931	.	C	T	420.33	.	AC=4;AF=0.100;AN=40;BaseQRankSum=0.108;DP=2764;Dels=0.00;FS=14.168;HRun=1;HaplotypeScore=0.1500;InbreedingCoeff=0.9144;MQ=254.00;MQ0=0;MQRankSum=0.228;QD=35.03;ReadPosRankSum=-4.706;SB=-80.98	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:201,0:201:99:0,605,8394	1/1:0,8:8:24.08:334,24,0	0/0:162,0:162:99:0,488,6765	./.	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.04:0,12,167	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:197,0:197:99:0,593,8227	0/0:158,0:158:99:0,476,6598	0/0:147,0:147:99:0,442,6139	0/0:195,0:195:99:0,587,8143	0/0:163,0:163:99:0,491,6807	0/0:158,0:158:99:0,476,6598	0/0:156,0:156:99:0,470,6515	0/0:153,0:153:99:0,461,6389	1/1:0,4:4:12.04:167,12,0	0/0:210,0:210:99:0,632,8770
gi|293339394|gb|GU595196.1|	2940	.	T	C	62.04	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.252;DP=2725;Dels=0.00;FS=6.021;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8297;MQ=254.00;MQ0=0;MQRankSum=-0.032;QD=20.68;ReadPosRankSum=-0.892;SB=-0.02	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:182,0:182:99:0,548,7600	./.	0/0:163,0:163:99:0,491,6807	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:164,0:164:99:0,494,6849	0/0:201,0:201:99:0,605,8394	0/0:150,0:150:99:0,452,6264	0/0:146,0:146:99:0,439,6097	0/0:181,0:181:99:0,545,7559	0/0:157,0:157:99:0,473,6556	0/0:148,0:148:99:0,445,6181	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	./.	0/0:206,0:206:99:0,620,8603
gi|293339394|gb|GU595196.1|	2949	.	T	C	35.47	.	AC=2;AF=0.059;AN=34;BaseQRankSum=-0.041;DP=2747;Dels=0.00;FS=3.008;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8827;MQ=254.00;MQ0=0;MQRankSum=0.228;QD=17.74;ReadPosRankSum=-1.865;SB=-0.02	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:186,0:186:99:0,560,7767	./.	0/0:174,0:174:99:0,524,7266	./.	./.	1/1:0,2:2:6.02:84,6,0	0/0:177,0:177:99:0,533,7392	0/0:154,0:154:99:0,464,6431	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	0/0:189,0:189:99:0,569,7893	0/0:151,0:151:99:0,455,6306	0/0:155,0:155:99:0,467,6473	0/0:187,0:187:99:0,563,7809	0/0:171,0:171:99:0,515,7141	0/0:155,0:155:99:0,467,6473	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	./.	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	3003	.	T	C	62.04	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.578;DP=2688;Dels=0.00;FS=9.114;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8297;MQ=254.00;MQ0=0;MQRankSum=0.101;QD=20.68;ReadPosRankSum=-2.647;SB=-0.02	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:189,0:189:99:0,569,7893	1/1:0,2:2:6.02:84,6,0	0/0:163,0:163:99:0,491,6807	./.	./.	./.	0/0:152,0:152:99:0,458,6348	0/0:158,0:158:99:0,476,6598	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:181,0:181:99:0,545,7559	0/0:155,0:155:99:0,467,6473	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:139,0:139:99:0,418,5805	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	1/1:0,1:1:3.01:42,3,0	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	3030	.	T	A	379.46	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.126;DP=2830;Dels=0.00;FS=33.812;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9870;MQ=254.00;MQ0=0;MQRankSum=0.158;QD=34.50;ReadPosRankSum=2.569;SB=-0.02	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:179,0:179:99:0,539,7475	1/1:0,6:6:18.06:251,18,0	0/0:182,0:182:99:0,548,7600	./.	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	0/0:186,0:186:99:0,560,7767	0/0:206,0:206:99:0,620,8603	0/0:200,0:200:99:0,602,8352	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:157,0:157:99:0,473,6556	0/0:153,0:153:99:0,461,6389	0/0:172,0:172:99:0,518,7183	0/0:155,0:155:99:0,467,6473	0/0:167,0:167:99:0,503,6974	1/1:0,5:5:15.05:209,15,0	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	3062	.	A	G	101.24	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.014;DP=2746;Dels=0.00;FS=12.500;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8613;MQ=254.00;MQ0=0;MQRankSum=-0.053;QD=25.31;ReadPosRankSum=-1.699;SB=-0.02	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:202,0:202:99:0,608,8436	1/1:0,3:3:9.03:125,9,0	0/0:173,0:173:99:0,521,7225	./.	./.	./.	0/0:148,0:148:99:0,445,6181	0/0:160,0:160:99:0,482,6682	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	0/0:184,0:184:99:0,554,7684	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:194,0:194:99:0,584,8102	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:141,0:141:99:0,424,5888	1/1:0,1:1:3.01:42,3,0	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	3572	.	T	G	1249.80	.	AC=10;AF=0.238;AN=42;BaseQRankSum=2.104;DP=2750;Dels=0.00;FS=96.863;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9851;MQ=254.00;MQ0=0;MQRankSum=0.399;QD=37.87;ReadPosRankSum=-7.805;SB=-0.02	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:142,0:142:99:0,427,5930	1/1:0,5:5:15.05:209,15,0	0/0:187,0:187:99:0,563,7809	1/1:0,6:6:18.06:251,18,0	1/1:0,4:4:12.04:167,12,0	1/1:0,11:11:33.11:459,33,0	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:161,0:161:99:0,485,6723	0/0:160,0:160:99:0,482,6682	0/0:183,0:183:99:0,551,7642	0/0:165,0:165:99:0,497,6890	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	0/0:177,0:177:99:0,533,7392	0/0:170,0:170:99:0,512,7099	0/0:154,0:154:99:0,464,6431	1/1:0,7:7:21.07:292,21,0	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	3586	.	G	C	3110.59	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.830;DP=2903;Dels=0.00;FS=223.316;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.023;QD=40.40;ReadPosRankSum=-2.529;SB=-0.02	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:17,0:17:51.17:0,51,710	0/0:173,0:173:99:0,521,7225	1/1:0,15:15:45.15:626,45,0	1/1:0,24:24:72.24:1002,72,0	1/1:0,38:38:99:1587,114,0	0/0:183,0:183:99:0,551,7642	0/0:170,0:170:99:0,512,7099	0/0:156,0:156:99:0,470,6515	0/0:171,0:171:99:0,515,7141	0/0:197,0:197:99:0,593,8227	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:176,0:176:99:0,530,7350	0/0:162,0:162:99:0,488,6765	0/0:15,0:15:45.15:0,45,626	0/0:206,0:206:99:0,620,8603
gi|293339394|gb|GU595196.1|	3675	.	C	G	8477.37	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.065;DP=2883;Dels=0.00;FS=583.869;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.077;QD=41.76;ReadPosRankSum=0.338;SB=-0.02	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:166,0:166:99:0,500,6932	1/1:0,32:32:96.32:1336,96,0	0/0:179,0:179:99:0,539,7475	1/1:0,37:37:99:1545,111,0	1/1:0,41:41:99:1712,123,0	1/1:0,61:61:99:2547,184,0	0/0:160,0:160:99:0,482,6682	0/0:179,0:179:99:0,539,7475	0/0:156,0:156:99:0,470,6515	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:180,0:180:99:0,542,7517	0/0:178,0:178:99:0,536,7433	0/0:142,0:142:99:0,427,5930	1/1:0,32:32:96.32:1336,96,0	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	3727	.	A	G	7433.36	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.086;DP=3020;Dels=0.00;FS=254.273;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.328;QD=41.76;ReadPosRankSum=1.371;SB=-793.47	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:166,0:166:99:0,500,6932	0/0:49,0:49:99:0,147,2046	0/0:166,0:166:99:0,500,6932	1/1:0,42:42:99:1754,126,0	1/1:0,52:52:99:2172,157,0	1/1:0,84:84:99:3508,253,0	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:157,0:157:99:0,473,6556	0/0:186,0:186:99:0,560,7767	0/0:180,0:180:99:0,542,7517	0/0:152,0:152:99:0,458,6348	0/0:184,0:184:99:0,554,7684	0/0:176,0:176:99:0,530,7350	0/0:155,0:155:99:0,467,6473	0/0:169,0:169:99:0,509,7057	0/0:29,0:29:87.29:0,87,1211	0/0:199,0:199:99:0,599,8310
gi|293339394|gb|GU595196.1|	3761	.	A	C	5094.78	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.390;DP=3113;Dels=0.00;FS=131.291;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.010;QD=41.76;ReadPosRankSum=-1.038;SB=-793.47	GT:AD:DP:GQ:PL	0/0:207,0:207:99:0,623,8644	0/0:147,0:147:99:0,442,6139	1/1:0,70:70:99:2923,211,0	0/0:192,0:192:99:0,578,8018	0/0:50,0:50:99:0,151,2088	0/0:66,0:66:99:0,199,2756	0/0:93,0:93:99:0,280,3884	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	0/0:134,0:134:99:0,403,5596	0/0:159,0:159:99:0,479,6640	0/0:189,0:189:99:0,569,7893	0/0:166,0:166:99:0,500,6932	0/0:149,0:149:99:0,448,6222	0/0:203,0:203:99:0,611,8477	0/0:182,0:182:99:0,548,7600	0/0:179,0:179:99:0,539,7475	0/0:155,0:155:99:0,467,6473	1/1:0,52:52:99:2172,157,0	0/0:214,0:214:99:0,644,8937
gi|293339394|gb|GU595196.1|	3788	.	T	C	27603.60	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.725;DP=3141;Dels=0.00;FS=19.033;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.524;QD=41.76;ReadPosRankSum=0.752;SB=-12068.76	GT:AD:DP:GQ:PL	0/0:191,0:191:99:0,575,7976	0/0:157,0:157:99:0,473,6556	0/0:67,0:67:99:0,202,2798	1/1:0,192:192:99:8018,578,0	1/1:0,62:62:99:2589,187,0	1/1:0,84:84:99:3508,253,0	1/1:0,118:118:99:4928,355,0	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:145,0:145:99:0,436,6055	0/0:175,0:175:99:0,527,7308	0/0:152,0:152:99:0,458,6348	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:195,0:195:99:0,587,8143	0/0:172,0:172:99:0,518,7183	0/0:185,0:185:99:0,557,7726	0/0:157,0:157:99:0,473,6556	0/0:46,0:46:99:0,138,1921	1/1:0,205:205:99:8561,617,0
gi|293339394|gb|GU595196.1|	3821	.	A	C	2962.01	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.058;DP=3182;Dels=0.00;FS=23.801;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.199;QD=40.58;ReadPosRankSum=1.707;SB=-960.51	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:159,0:159:99:0,479,6640	1/1:0,45:45:99:1879,135,0	0/0:179,0:179:99:0,539,7475	0/0:78,0:78:99:0,235,3257	0/0:85,0:85:99:0,256,3550	0/0:160,0:160:99:0,482,6682	0/0:193,0:193:99:0,581,8060	0/0:196,0:196:99:0,590,8185	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:199,0:199:99:0,599,8310	0/0:164,0:164:99:0,494,6849	0/0:179,0:179:99:0,539,7475	0/0:130,0:130:99:0,391,5429	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:171,0:171:99:0,515,7141	1/1:0,28:28:84.28:1169,84,0	0/0:182,0:182:99:0,548,7600
gi|293339394|gb|GU595196.1|	3832	.	C	T	1918	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.840;DP=3141;Dels=0.00;FS=9.494;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.479;QD=39.96;ReadPosRankSum=2.079;SB=-751.68	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:165,0:165:99:0,497,6890	1/1:0,28:28:84.28:1169,84,0	0/0:179,0:179:99:0,539,7475	0/0:72,0:72:99:0,217,3007	0/0:75,0:75:99:0,226,3132	0/0:142,0:142:99:0,427,5930	0/0:190,0:190:99:0,572,7934	0/0:188,0:188:99:0,566,7851	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:187,0:187:99:0,563,7809	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:127,0:127:99:0,382,5304	0/0:170,0:170:99:0,512,7099	0/0:182,0:182:99:0,548,7600	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	1/1:0,20:20:60.20:835,60,0	0/0:190,0:190:99:0,572,7934
gi|293339394|gb|GU595196.1|	3859	.	C	T	5053.02	.	AC=6;AF=0.158;AN=38;BaseQRankSum=0.148;DP=2858;Dels=0.00;FS=1.074;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.533;QD=41.76;ReadPosRankSum=-5.964;SB=-2422.11	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:174,0:174:99:0,524,7266	./.	0/0:160,0:160:99:0,482,6682	1/1:0,31:31:93.31:1295,93,0	1/1:0,30:30:90.30:1253,90,0	1/1:0,60:60:99:2506,181,0	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:183,0:183:99:0,551,7642	0/0:187,0:187:99:0,563,7809	0/0:189,0:189:99:0,569,7893	0/0:156,0:156:99:0,470,6515	0/0:142,0:142:99:0,427,5930	0/0:156,0:156:99:0,470,6515	0/0:178,0:178:99:0,536,7433	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	./.	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	3865	.	T	A	6264.07	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.438;DP=2903;Dels=0.00;FS=3.962;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.611;QD=41.76;ReadPosRankSum=-13.552;SB=-3006.24	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:176,0:176:99:0,530,7350	1/1:0,13:13:39.13:543,39,0	0/0:158,0:158:99:0,476,6598	1/1:0,27:27:81.27:1128,81,0	1/1:0,35:35:99:1462,105,0	1/1:0,63:63:99:2631,190,0	0/0:168,0:168:99:0,506,7016	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:183,0:183:99:0,551,7642	0/0:183,0:183:99:0,551,7642	0/0:190,0:190:99:0,572,7934	0/0:158,0:158:99:0,476,6598	0/0:136,0:136:99:0,409,5679	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	1/1:0,12:12:36.12:501,36,0	0/0:217,0:217:99:0,653,9062
gi|293339394|gb|GU595196.1|	3877	.	A	T	7892.72	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.293;DP=2885;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.091;QD=41.76;ReadPosRankSum=-6.118;SB=-3883.72	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	1/1:0,32:32:96.32:1336,96,0	0/0:157,0:157:99:0,473,6556	1/1:0,41:41:99:1712,123,0	1/1:0,34:34:99:1420,102,0	1/1:0,53:53:99:2213,160,0	0/0:164,0:164:99:0,494,6849	0/0:184,0:184:99:0,554,7684	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:183,0:183:99:0,551,7642	0/0:192,0:192:99:0,578,8018	0/0:150,0:150:99:0,452,6264	0/0:139,0:139:99:0,418,5805	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:153,0:153:99:0,461,6389	1/1:0,29:29:87.29:1211,87,0	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	3958	.	T	C	4802.46	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.641;DP=3203;Dels=0.00;FS=77.425;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.131;QD=41.76;ReadPosRankSum=4.355;SB=-1044.03	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	1/1:0,68:68:99:2840,205,0	0/0:197,0:197:99:0,593,8227	0/0:68,0:68:99:0,205,2840	0/0:95,0:95:99:0,286,3967	0/0:153,0:153:99:0,461,6389	0/0:171,0:171:99:0,515,7141	0/0:176,0:176:99:0,530,7350	0/0:191,0:191:99:0,575,7976	0/0:151,0:151:99:0,455,6306	0/0:178,0:178:99:0,536,7433	0/0:183,0:183:99:0,551,7642	0/0:153,0:153:99:0,461,6389	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	1/1:0,47:47:99:1963,141,0	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	3991	.	G	T	2502.65	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.291;DP=3039;Dels=0.00;FS=18.460;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.604;QD=40.37;ReadPosRankSum=3.455;SB=-835.21	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:159,0:159:99:0,479,6640	1/1:0,41:41:99:1712,123,0	0/0:180,0:180:99:0,542,7517	0/0:64,0:64:99:0,193,2673	0/0:87,0:87:99:0,262,3633	0/0:143,0:143:99:0,430,5972	0/0:158,0:158:99:0,476,6598	0/0:187,0:187:99:0,563,7809	0/0:194,0:194:99:0,584,8102	0/0:138,0:138:99:0,415,5763	0/0:161,0:161:99:0,485,6723	0/0:172,0:172:99:0,518,7183	0/0:156,0:156:99:0,470,6515	0/0:148,0:148:99:0,445,6181	0/0:180,0:180:99:0,542,7517	0/0:181,0:181:99:0,545,7559	0/0:157,0:157:99:0,473,6556	0/0:167,0:167:99:0,503,6974	1/1:0,21:21:63.21:877,63,0	0/0:181,0:181:99:0,545,7559
gi|293339394|gb|GU595196.1|	3995	.	A	C	2043.29	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.280;DP=3011;Dels=0.00;FS=17.926;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.526;QD=40.06;ReadPosRankSum=7.040;SB=-667.97	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	1/1:0,35:35:99:1462,105,0	0/0:177,0:177:99:0,533,7392	0/0:62,0:62:99:0,187,2589	0/0:79,0:79:99:0,238,3299	0/0:138,0:138:99:0,415,5763	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	0/0:192,0:192:99:0,578,8018	0/0:139,0:139:99:0,418,5805	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:145,0:145:99:0,436,6055	0/0:187,0:187:99:0,563,7809	0/0:187,0:187:99:0,563,7809	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	1/1:0,16:16:48.16:668,48,0	0/0:179,0:179:99:0,539,7475
gi|293339394|gb|GU595196.1|	4006	.	A	C	11066.51	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.135;DP=3018;Dels=0.00;FS=3.190;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.306;QD=41.76;ReadPosRankSum=0.370;SB=-5345.34	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:153,0:153:99:0,461,6389	0/0:49,0:49:99:0,147,2046	0/0:165,0:165:99:0,497,6890	1/1:0,66:66:99:2756,199,0	1/1:0,68:68:99:2840,205,0	1/1:0,131:131:99:5471,394,0	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:186,0:186:99:0,560,7767	0/0:143,0:143:99:0,430,5972	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	0/0:158,0:158:99:0,476,6598	0/0:133,0:133:99:0,400,5554	0/0:171,0:171:99:0,515,7141	0/0:187,0:187:99:0,563,7809	0/0:156,0:156:99:0,470,6515	0/0:172,0:172:99:0,518,7183	0/0:28,0:28:84.28:0,84,1169	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	4033	.	G	T	999.31	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.432;DP=3080;Dels=0.00;FS=13.090;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.628;QD=38.44;ReadPosRankSum=3.081;SB=-333.27	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	1/1:0,14:14:42.14:585,42,0	0/0:191,0:191:99:0,575,7976	0/0:64,0:64:99:0,193,2673	0/0:61,0:61:99:0,184,2547	0/0:151,0:151:99:0,455,6306	0/0:184,0:184:99:0,554,7684	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	0/0:190,0:190:99:0,572,7934	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:150,0:150:99:0,452,6264	0/0:133,0:133:99:0,400,5554	0/0:151,0:151:99:0,455,6306	0/0:196,0:196:99:0,590,8185	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	1/1:0,12:12:36.12:501,36,0	0/0:219,0:219:99:0,659,9146
gi|293339394|gb|GU595196.1|	4036	.	A	T	999.31	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.062;DP=3042;Dels=0.00;FS=13.073;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.634;QD=38.44;ReadPosRankSum=0.900;SB=-333.27	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	1/1:0,14:14:42.14:585,42,0	0/0:186,0:186:99:0,560,7767	0/0:65,0:65:99:0,196,2714	0/0:61,0:61:99:0,184,2547	0/0:156,0:156:99:0,470,6515	0/0:185,0:185:99:0,557,7726	0/0:156,0:156:99:0,470,6515	0/0:176,0:176:99:0,530,7350	0/0:194,0:194:99:0,584,8102	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:152,0:152:99:0,458,6348	0/0:127,0:127:99:0,382,5304	0/0:144,0:144:99:0,433,6013	0/0:188,0:188:99:0,566,7851	0/0:182,0:182:99:0,548,7600	0/0:179,0:179:99:0,539,7475	1/1:0,12:12:36.12:501,36,0	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	4054	.	T	C	1667.44	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.073;DP=3058;Dels=0.00;FS=7.924;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.362;QD=39.70;ReadPosRankSum=-3.277;SB=-668.16	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	1/1:0,25:25:75.25:1044,75,0	0/0:182,0:182:99:0,548,7600	0/0:89,0:89:99:0,268,3717	0/0:67,0:67:99:0,202,2798	0/0:150,0:150:99:0,452,6264	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:165,0:165:99:0,497,6890	0/0:201,0:201:99:0,605,8394	0/0:164,0:164:99:0,494,6849	0/0:154,0:154:99:0,464,6431	0/0:152,0:152:99:0,458,6348	0/0:132,0:132:99:0,397,5512	0/0:159,0:159:99:0,479,6640	0/0:155,0:155:99:0,467,6473	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	1/1:0,17:17:51.17:710,51,0	0/0:217,0:217:99:0,653,9062
gi|293339394|gb|GU595196.1|	4060	.	T	C	1959.77	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.868;DP=3070;Dels=0.00;FS=8.229;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.924;QD=40.00;ReadPosRankSum=0.651;SB=-793.45	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:182,0:182:99:0,548,7600	1/1:0,25:25:75.25:1044,75,0	0/0:176,0:176:99:0,530,7350	0/0:92,0:92:99:0,277,3842	0/0:73,0:73:99:0,220,3049	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:190,0:190:99:0,572,7934	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:152,0:152:99:0,458,6348	0/0:132,0:132:99:0,397,5512	0/0:156,0:156:99:0,470,6515	0/0:153,0:153:99:0,461,6389	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	1/1:0,24:24:72.24:1002,72,0	0/0:209,0:209:99:0,629,8728
gi|293339394|gb|GU595196.1|	4111	.	G	A	4092.53	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.325;DP=3184;Dels=0.00;FS=5.849;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.842;QD=41.76;ReadPosRankSum=3.835;SB=-1795.71	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:173,0:173:99:0,521,7225	1/1:0,59:59:99:2464,178,0	0/0:158,0:158:99:0,476,6598	0/0:98,0:98:99:0,295,4093	0/0:93,0:93:99:0,280,3884	0/0:168,0:168:99:0,506,7016	0/0:151,0:151:99:0,455,6306	0/0:168,0:168:99:0,506,7016	0/0:198,0:198:99:0,596,8269	0/0:167,0:167:99:0,503,6974	0/0:186,0:186:99:0,560,7767	0/0:183,0:183:99:0,551,7642	0/0:177,0:177:99:0,533,7392	0/0:152,0:152:99:0,458,6348	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:148,0:148:99:0,445,6181	0/0:167,0:167:99:0,503,6974	1/1:0,39:39:99:1629,117,0	0/0:207,0:207:99:0,623,8644
gi|293339394|gb|GU595196.1|	4132	.	A	C	15033.74	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.150;DP=3074;Dels=0.00;FS=10.340;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.190;QD=41.76;ReadPosRankSum=0.979;SB=-6765.18	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:180,0:180:99:0,542,7517	1/1:0,28:28:84.28:1169,84,0	0/0:182,0:182:99:0,548,7600	1/1:0,90:90:99:3758,271,0	1/1:0,88:88:99:3675,265,0	1/1:0,132:132:99:5512,397,0	0/0:155,0:155:99:0,467,6473	0/0:156,0:156:99:0,470,6515	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:188,0:188:99:0,566,7851	0/0:169,0:169:99:0,509,7057	0/0:155,0:155:99:0,467,6473	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:150,0:150:99:0,452,6264	0/0:172,0:172:99:0,518,7183	1/1:0,22:22:66.22:919,66,0	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	4165	.	G	C	4885.98	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.156;DP=2843;Dels=0.00;FS=5.872;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.571;QD=41.76;ReadPosRankSum=-3.608;SB=-2171.56	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:147,0:147:99:0,442,6139	./.	0/0:169,0:169:99:0,509,7057	1/1:0,38:38:99:1587,114,0	1/1:0,34:34:99:1420,102,0	1/1:0,45:45:99:1879,135,0	0/0:165,0:165:99:0,497,6890	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:179,0:179:99:0,539,7475	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	0/0:156,0:156:99:0,470,6515	0/0:171,0:171:99:0,515,7141	./.	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	4181	.	T	C	15534.86	.	AC=10;AF=0.263;AN=38;BaseQRankSum=-1.081;DP=2701;Dels=0.00;FS=1.078;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9989;MQ=254.00;MQ0=0;MQRankSum=0.258;QD=41.76;ReadPosRankSum=-1.957;SB=-7598.28	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:148,0:148:99:0,445,6181	./.	1/1:0,155:155:99:6473,467,0	1/1:0,8:8:24.08:334,24,0	1/1:0,8:8:24.08:334,24,0	1/1:0,11:11:33.11:459,33,0	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:147,0:147:99:0,442,6139	0/0:157,0:157:99:0,473,6556	0/0:188,0:188:99:0,566,7851	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:153,0:153:99:0,461,6389	0/0:179,0:179:99:0,539,7475	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	./.	1/1:0,190:190:99:7934,572,0
gi|293339394|gb|GU595196.1|	4186	.	G	C	1401.63	.	AC=6;AF=0.158;AN=38;BaseQRankSum=0.250;DP=2721;Dels=0.00;FS=15.558;HRun=1;HaplotypeScore=1.8945;InbreedingCoeff=0.9984;MQ=254.00;MQ0=0;MQRankSum=1.154;QD=38.93;ReadPosRankSum=-8.246;SB=-458.17	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:155,0:155:99:0,467,6473	./.	0/0:157,0:157:99:0,473,6556	1/1:0,7:7:21.07:292,21,0	1/1:0,13:13:39.13:543,39,0	1/1:0,16:16:48.16:668,48,0	0/0:172,0:172:99:0,518,7183	0/0:186,0:186:99:0,560,7767	0/0:166,0:166:99:0,500,6932	0/0:144,0:144:99:0,433,6013	0/0:156,0:156:99:0,470,6515	0/0:186,0:186:99:0,560,7767	0/0:164,0:164:99:0,494,6849	0/0:178,0:178:99:0,536,7433	0/0:149,0:149:99:0,448,6222	0/0:172,0:172:99:0,518,7183	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	./.	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	4198	.	C	G	501	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.073;DP=2866;Dels=0.00;FS=1.024;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9910;MQ=254.00;MQ0=0;MQRankSum=0.964;QD=35.79;ReadPosRankSum=-0.960;SB=-243.83	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:170,0:170:99:0,512,7099	1/1:0,9:9:27.09:376,27,0	0/0:152,0:152:99:0,458,6348	0/0:34,0:34:99:0,102,1420	0/0:40,0:40:99:0,120,1670	0/0:59,0:59:99:0,178,2464	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:156,0:156:99:0,470,6515	0/0:193,0:193:99:0,581,8060	0/0:156,0:156:99:0,470,6515	0/0:170,0:170:99:0,512,7099	0/0:151,0:151:99:0,455,6306	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	1/1:0,5:5:15.05:209,15,0	0/0:184,0:184:99:0,554,7684
gi|293339394|gb|GU595196.1|	4213	.	G	T	9604.90	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.296;DP=2894;Dels=0.00;FS=1.359;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.529;QD=41.76;ReadPosRankSum=4.864;SB=-4635.37	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:39,0:39:99:0,117,1629	0/0:150,0:150:99:0,452,6264	1/1:0,48:48:99:2004,144,0	1/1:0,70:70:99:2923,211,0	1/1:0,112:112:99:4677,337,0	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:149,0:149:99:0,448,6222	0/0:167,0:167:99:0,503,6974	0/0:148,0:148:99:0,445,6181	0/0:186,0:186:99:0,560,7767	0/0:161,0:161:99:0,485,6723	0/0:148,0:148:99:0,445,6181	0/0:134,0:134:99:0,403,5596	0/0:160,0:160:99:0,482,6682	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	0/0:14,0:14:42.14:0,42,585	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	4225	.	G	A	3382.61	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.367;DP=3051;Dels=0.00;FS=4.331;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.950;QD=41.76;ReadPosRankSum=2.192;SB=-1545.15	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:161,0:161:99:0,485,6723	1/1:0,54:54:99:2255,163,0	0/0:163,0:163:99:0,491,6807	0/0:76,0:76:99:0,229,3174	0/0:97,0:97:99:0,292,4051	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:154,0:154:99:0,464,6431	0/0:152,0:152:99:0,458,6348	0/0:184,0:184:99:0,554,7684	0/0:155,0:155:99:0,467,6473	0/0:188,0:188:99:0,566,7851	0/0:182,0:182:99:0,548,7600	0/0:155,0:155:99:0,467,6473	0/0:143,0:143:99:0,430,5972	0/0:151,0:151:99:0,455,6306	0/0:176,0:176:99:0,530,7350	0/0:172,0:172:99:0,518,7183	1/1:0,27:27:81.27:1128,81,0	0/0:187,0:187:99:0,563,7809
gi|293339394|gb|GU595196.1|	4240	.	C	T	4050.77	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.419;DP=3157;Dels=0.00;FS=10.059;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.634;QD=41.76;ReadPosRankSum=3.235;SB=-1670.43	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:159,0:159:99:0,479,6640	1/1:0,62:62:99:2589,187,0	0/0:173,0:173:99:0,521,7225	0/0:91,0:91:99:0,274,3800	0/0:110,0:110:99:0,331,4594	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	0/0:152,0:152:99:0,458,6348	0/0:158,0:158:99:0,476,6598	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:181,0:181:99:0,545,7559	0/0:149,0:149:99:0,448,6222	0/0:156,0:156:99:0,470,6515	0/0:154,0:154:99:0,464,6431	0/0:158,0:158:99:0,476,6598	0/0:190,0:190:99:0,572,7934	1/1:0,35:35:99:1462,105,0	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	4294	.	T	A	462.83	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.154;DP=3106;Dels=0.00;FS=5.670;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9682;MQ=254.00;MQ0=0;MQRankSum=0.653;QD=35.60;ReadPosRankSum=-5.277;SB=-163.61	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:205,0:205:99:0,617,8561	1/1:0,10:10:30.10:418,30,0	0/0:195,0:195:99:0,587,8143	0/0:98,0:98:99:0,295,4093	0/0:92,0:92:99:0,277,3842	0/0:169,0:169:99:0,509,7057	0/0:144,0:144:99:0,433,6013	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	0/0:172,0:172:99:0,518,7183	0/0:144,0:144:99:0,433,6013	0/0:165,0:165:99:0,497,6890	0/0:189,0:189:99:0,569,7893	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	1/1:0,3:3:9.03:125,9,0	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	4297	.	G	A	60.58	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.446;DP=3074;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8323;MQ=254.00;MQ0=0;MQRankSum=0.683;QD=20.19;ReadPosRankSum=-2.947;SB=-38.96	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:201,0:201:99:0,605,8394	1/1:0,2:2:6.02:84,6,0	0/0:191,0:191:99:0,575,7976	0/0:98,0:98:99:0,295,4093	0/0:96,0:96:99:0,289,4009	0/0:166,0:166:99:0,500,6932	0/0:141,0:141:99:0,424,5888	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:158,0:158:99:0,476,6598	0/0:168,0:168:99:0,506,7016	0/0:145,0:145:99:0,436,6055	0/0:165,0:165:99:0,497,6890	0/0:189,0:189:99:0,569,7893	0/0:149,0:149:99:0,448,6222	0/0:160,0:160:99:0,482,6682	1/1:0,1:1:3.01:42,3,0	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	4333	.	G	A	1375.13	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.009;DP=3083;Dels=0.00;FS=5.062;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.230;QD=39.29;ReadPosRankSum=7.310;SB=-583.87	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:181,0:181:99:0,545,7559	1/1:0,22:22:66.22:919,66,0	0/0:164,0:164:99:0,494,6849	0/0:89,0:89:99:0,268,3717	0/0:86,0:86:99:0,259,3591	0/0:146,0:146:99:0,439,6097	0/0:161,0:161:99:0,485,6723	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:190,0:190:99:0,572,7934	0/0:180,0:180:99:0,542,7517	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	0/0:153,0:153:99:0,461,6389	0/0:164,0:164:99:0,494,6849	1/1:0,13:13:39.13:543,39,0	0/0:195,0:195:99:0,587,8143
gi|293339394|gb|GU595196.1|	4357	.	G	A	1208.09	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.544;DP=3030;Dels=0.00;FS=22.106;HRun=5;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.298;QD=38.97;ReadPosRankSum=0.376;SB=-334.03	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:170,0:170:99:0,512,7099	1/1:0,17:17:51.17:710,51,0	0/0:154,0:154:99:0,464,6431	0/0:80,0:80:99:0,241,3341	0/0:86,0:86:99:0,259,3591	0/0:124,0:124:99:0,373,5178	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	0/0:175,0:175:99:0,527,7308	0/0:181,0:181:99:0,545,7559	0/0:191,0:191:99:0,575,7976	0/0:176,0:176:99:0,530,7350	0/0:167,0:167:99:0,503,6974	0/0:155,0:155:99:0,467,6473	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	1/1:0,14:14:42.14:585,42,0	0/0:200,0:200:99:0,602,8352
gi|293339394|gb|GU595196.1|	4361	.	A	C	915.83	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.492;DP=3046;Dels=0.00;FS=31.097;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9998;MQ=254.00;MQ0=0;MQRankSum=-0.085;QD=38.16;ReadPosRankSum=3.296;SB=-166.86	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	1/1:0,11:11:33.11:459,33,0	0/0:150,0:150:99:0,452,6264	0/0:75,0:75:99:0,226,3132	0/0:93,0:93:99:0,280,3884	0/0:131,0:131:99:0,394,5471	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:190,0:190:99:0,572,7934	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	1/1:0,13:13:39.13:543,39,0	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	4372	.	G	C	9479.61	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.041;DP=2963;Dels=0.00;FS=43.763;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.305;QD=41.76;ReadPosRankSum=2.964;SB=-3549.65	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:168,0:168:99:0,506,7016	0/0:35,0:35:99:0,105,1462	0/0:148,0:148:99:0,445,6181	1/1:0,52:52:99:2172,157,0	1/1:0,69:69:99:2881,208,0	1/1:0,106:106:99:4427,319,0	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:153,0:153:99:0,461,6389	0/0:154,0:154:99:0,464,6431	0/0:169,0:169:99:0,509,7057	0/0:179,0:179:99:0,539,7475	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	0/0:171,0:171:99:0,515,7141	0/0:22,0:22:66.22:0,66,919	0/0:207,0:207:99:0,623,8644
gi|293339394|gb|GU595196.1|	4387	.	G	A	11066.51	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.608;DP=2957;Dels=0.00;FS=56.263;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.283;QD=41.76;ReadPosRankSum=-0.895;SB=-4092.53	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	1/1:0,27:27:81.27:1128,81,0	0/0:145,0:145:99:0,436,6055	1/1:0,39:39:99:1629,117,0	1/1:0,72:72:99:3007,217,0	1/1:0,104:104:99:4343,313,0	0/0:166,0:166:99:0,500,6932	0/0:157,0:157:99:0,473,6556	0/0:152,0:152:99:0,458,6348	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:183,0:183:99:0,551,7642	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	0/0:185,0:185:99:0,557,7726	0/0:151,0:151:99:0,455,6306	1/1:0,23:23:69.23:960,69,0	0/0:202,0:202:99:0,608,8436
gi|293339394|gb|GU595196.1|	4411	.	C	T	12277.56	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.696;DP=2925;Dels=0.00;FS=9.065;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.642;QD=41.76;ReadPosRankSum=2.578;SB=-5721.18	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	1/1:0,24:24:72.24:1002,72,0	0/0:128,0:128:99:0,385,5345	1/1:0,64:64:99:2673,193,0	1/1:0,56:56:99:2339,169,0	1/1:0,123:123:99:5137,370,0	0/0:160,0:160:99:0,482,6682	0/0:161,0:161:99:0,485,6723	0/0:152,0:152:99:0,458,6348	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:182,0:182:99:0,548,7600	0/0:171,0:171:99:0,515,7141	0/0:156,0:156:99:0,470,6515	0/0:159,0:159:99:0,479,6640	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	1/1:0,27:27:81.27:1128,81,0	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	4435	.	T	C	273.33	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.753;DP=2943;Dels=0.00;FS=3.127;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9979;MQ=254.00;MQ0=0;MQRankSum=0.236;QD=34.17;ReadPosRankSum=-2.704;SB=-121.09	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:161,0:161:99:0,485,6723	./.	0/0:130,0:130:99:0,391,5429	0/0:98,0:98:99:0,295,4093	0/0:72,0:72:99:0,217,3007	0/0:142,0:142:99:0,427,5930	0/0:146,0:146:99:0,439,6097	0/0:181,0:181:99:0,545,7559	0/0:140,0:140:99:0,421,5846	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:174,0:174:99:0,524,7266	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	1/1:0,8:8:24.08:334,24,0	0/0:174,0:174:99:0,524,7266
gi|293339394|gb|GU595196.1|	4444	.	G	A	793.06	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.635;DP=2934;Dels=0.00;FS=7.233;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9916;MQ=254.00;MQ0=0;MQRankSum=-1.283;QD=37.76;ReadPosRankSum=-5.424;SB=-330.25	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	1/1:0,16:16:48.16:668,48,0	0/0:136,0:136:99:0,409,5679	0/0:96,0:96:99:0,289,4009	0/0:75,0:75:99:0,226,3132	0/0:129,0:129:99:0,388,5387	0/0:141,0:141:99:0,424,5888	0/0:180,0:180:99:0,542,7517	0/0:141,0:141:99:0,424,5888	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:182,0:182:99:0,548,7600	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:157,0:157:99:0,473,6556	0/0:162,0:162:99:0,488,6765	0/0:183,0:183:99:0,551,7642	1/1:0,5:5:15.05:209,15,0	0/0:176,0:176:99:0,530,7350
gi|293339394|gb|GU595196.1|	4447	.	T	A	1166.53	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.081;DP=2929;Dels=0.00;FS=15.500;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=0.622;QD=38.88;ReadPosRankSum=-5.537;SB=-416.35	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	1/1:0,21:21:63.21:877,63,0	0/0:135,0:135:99:0,406,5638	0/0:94,0:94:99:0,283,3925	0/0:76,0:76:99:0,229,3174	0/0:128,0:128:99:0,385,5345	0/0:134,0:134:99:0,403,5596	0/0:179,0:179:99:0,539,7475	0/0:140,0:140:99:0,421,5846	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:187,0:187:99:0,563,7809	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:152,0:152:99:0,458,6348	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	1/1:0,9:9:27.09:376,27,0	0/0:173,0:173:99:0,521,7225
gi|293339394|gb|GU595196.1|	4462	.	G	T	12444.60	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.794;DP=3016;Dels=0.00;FS=26.510;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.429;QD=41.76;ReadPosRankSum=-0.034;SB=-4927.73	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:162,0:162:99:0,488,6765	0/0:56,0:56:99:0,169,2339	0/0:154,0:154:99:0,464,6431	1/1:0,79:79:99:3299,238,0	1/1:0,76:76:99:3174,229,0	1/1:0,143:143:99:5972,430,0	0/0:131,0:131:99:0,394,5471	0/0:175,0:175:99:0,527,7308	0/0:155,0:155:99:0,467,6473	0/0:164,0:164:99:0,494,6849	0/0:156,0:156:99:0,470,6515	0/0:192,0:192:99:0,578,8018	0/0:183,0:183:99:0,551,7642	0/0:170,0:170:99:0,512,7099	0/0:185,0:185:99:0,557,7726	0/0:159,0:159:99:0,479,6640	0/0:181,0:181:99:0,545,7559	0/0:162,0:162:99:0,488,6765	0/0:26,0:26:78.26:0,78,1086	0/0:150,0:150:99:0,452,6264
gi|293339394|gb|GU595196.1|	4563	.	G	T	15326.06	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.046;DP=3172;Dels=0.00;FS=5.739;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.490;QD=41.76;ReadPosRankSum=1.218;SB=-6890.47	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:161,0:161:99:0,485,6723	0/0:75,0:75:99:0,226,3132	0/0:168,0:168:99:0,506,7016	1/1:0,87:87:99:3633,262,0	1/1:0,115:115:99:4802,346,0	1/1:0,165:165:99:6890,497,0	0/0:183,0:183:99:0,551,7642	0/0:146,0:146:99:0,439,6097	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:184,0:184:99:0,554,7684	0/0:190,0:190:99:0,572,7934	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:154,0:154:99:0,464,6431	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:158,0:158:99:0,476,6598	0/0:63,0:63:99:0,190,2631	0/0:173,0:173:99:0,521,7225
gi|293339394|gb|GU595196.1|	4633	.	A	G	15994.23	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.368;DP=2961;Dels=0.00;FS=1.543;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.159;QD=41.76;ReadPosRankSum=0.641;SB=-7266.32	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:199,0:199:99:0,599,8310	0/0:96,0:96:99:0,289,4009	1/1:0,86:86:99:3591,259,0	1/1:0,50:50:99:2088,151,0	1/1:0,50:50:99:2088,151,0	1/1:0,96:96:99:4009,289,0	0/0:138,0:138:99:0,415,5763	0/0:204,0:204:99:0,614,8519	0/0:154,0:154:99:0,464,6431	0/0:179,0:179:99:0,539,7475	0/0:170,0:170:99:0,512,7099	0/0:181,0:181:99:0,545,7559	0/0:169,0:169:99:0,509,7057	0/0:189,0:189:99:0,569,7893	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:174,0:174:99:0,524,7266	0/0:43,0:43:99:0,129,1796	1/1:0,101:101:99:4218,304,0
gi|293339394|gb|GU595196.1|	4648	.	G	A	6681.67	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.500;DP=2742;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.729;QD=41.76;ReadPosRankSum=-11.312;SB=-3173.80	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:209,0:209:99:0,629,8728	0/0:99,0:99:99:0,298,4134	1/1:0,36:36:99:1503,108,0	1/1:0,20:20:60.20:835,60,0	1/1:0,22:22:66.22:919,66,0	1/1:0,38:38:99:1587,114,0	0/0:147,0:147:99:0,442,6139	0/0:188,0:188:99:0,566,7851	0/0:152,0:152:99:0,458,6348	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:196,0:196:99:0,590,8185	0/0:163,0:163:99:0,491,6807	0/0:185,0:185:99:0,557,7726	0/0:183,0:183:99:0,551,7642	0/0:151,0:151:99:0,455,6306	0/0:162,0:162:99:0,488,6765	0/0:184,0:184:99:0,554,7684	0/0:49,0:49:99:0,147,2046	1/1:0,44:44:99:1837,132,0
gi|293339394|gb|GU595196.1|	4659	.	C	T	4217.81	.	AC=6;AF=0.158;AN=38;BaseQRankSum=0.135;DP=2625;Dels=0.00;FS=3.798;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.020;QD=41.76;ReadPosRankSum=-9.568;SB=-1962.70	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:205,0:205:99:0,617,8561	0/0:103,0:103:99:0,310,4301	./.	1/1:0,14:14:42.14:585,42,0	1/1:0,33:33:99:1378,99,0	1/1:0,54:54:99:2255,163,0	0/0:143,0:143:99:0,430,5972	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	0/0:193,0:193:99:0,581,8060	0/0:165,0:165:99:0,497,6890	0/0:193,0:193:99:0,581,8060	0/0:172,0:172:99:0,518,7183	0/0:184,0:184:99:0,554,7684	0/0:159,0:159:99:0,479,6640	0/0:151,0:151:99:0,455,6306	0/0:150,0:150:99:0,452,6264	0/0:172,0:172:99:0,518,7183	0/0:51,0:51:99:0,154,2130	./.
gi|293339394|gb|GU595196.1|	4664	.	C	A	273.33	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.845;DP=2628;Dels=0.00;FS=7.740;HRun=0;HaplotypeScore=0.3999;InbreedingCoeff=0.9979;MQ=254.00;MQ0=0;MQRankSum=-0.919;QD=34.17;ReadPosRankSum=-4.387;SB=-81.23	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:202,0:202:99:0,608,8436	0/0:111,0:111:99:0,334,4635	1/1:0,8:8:24.08:334,24,0	0/0:28,0:28:84.28:0,84,1169	0/0:41,0:41:99:0,123,1712	0/0:69,0:69:99:0,208,2881	0/0:137,0:137:99:0,412,5721	0/0:160,0:160:99:0,482,6682	0/0:158,0:158:99:0,476,6598	0/0:194,0:194:99:0,584,8102	0/0:156,0:156:99:0,470,6515	0/0:192,0:192:99:0,578,8018	0/0:166,0:166:99:0,500,6932	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:154,0:154:99:0,464,6431	0/0:145,0:145:99:0,436,6055	0/0:166,0:166:99:0,500,6932	0/0:51,0:51:99:0,154,2130	./.
gi|293339394|gb|GU595196.1|	4673	.	T	A	191.80	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.773;DP=2784;Dels=0.00;FS=3.529;HRun=0;HaplotypeScore=0.6666;InbreedingCoeff=0.9919;MQ=254.00;MQ0=0;MQRankSum=0.680;QD=31.97;ReadPosRankSum=-4.001;SB=-79.25	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:194,0:194:99:0,584,8102	0/0:112,0:112:99:0,337,4677	0/0:43,0:43:99:0,129,1796	0/0:48,0:48:99:0,144,2004	0/0:60,0:60:99:0,181,2506	0/0:99,0:99:99:0,298,4134	0/0:143,0:143:99:0,430,5972	0/0:160,0:160:99:0,482,6682	0/0:166,0:166:99:0,500,6932	0/0:194,0:194:99:0,584,8102	0/0:172,0:172:99:0,518,7183	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:157,0:157:99:0,473,6556	0/0:159,0:159:99:0,479,6640	0/0:168,0:168:99:0,506,7016	0/0:50,0:50:99:0,151,2088	1/1:0,6:6:18.06:251,18,0
gi|293339394|gb|GU595196.1|	4679	.	T	C	15743.66	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.492;DP=2835;Dels=0.00;FS=3.578;HRun=1;HaplotypeScore=0.2857;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.179;QD=41.76;ReadPosRankSum=-1.640;SB=-7642.16	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:105,0:105:99:0,316,4385	1/1:0,68:68:99:2840,205,0	1/1:0,63:63:99:2631,190,0	1/1:0,78:78:99:3257,235,0	1/1:0,128:128:99:5345,385,0	0/0:139,0:139:99:0,418,5805	0/0:154,0:154:99:0,464,6431	0/0:174,0:174:99:0,524,7266	0/0:189,0:189:99:0,569,7893	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:156,0:156:99:0,470,6515	0/0:160,0:160:99:0,482,6682	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:51,0:51:99:0,154,2130	1/1:0,40:40:99:1670,120,0
gi|293339394|gb|GU595196.1|	4723	.	G	C	16161.27	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.398;DP=3242;Dels=0.00;FS=4.133;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.294;QD=41.76;ReadPosRankSum=0.284;SB=-7725.68	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:156,0:156:99:0,470,6515	0/0:129,0:129:99:0,388,5387	1/1:0,183:183:99:7642,551,0	0/0:104,0:104:99:0,313,4343	0/0:113,0:113:99:0,340,4719	0/0:155,0:155:99:0,467,6473	0/0:170,0:170:99:0,512,7099	0/0:149,0:149:99:0,448,6222	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	0/0:183,0:183:99:0,551,7642	0/0:152,0:152:99:0,458,6348	0/0:159,0:159:99:0,479,6640	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:59,0:59:99:0,178,2464	1/1:0,204:204:99:8519,614,0
gi|293339394|gb|GU595196.1|	4759	.	A	T	15326.06	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.545;DP=3243;Dels=0.00;FS=1.821;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.609;QD=41.76;ReadPosRankSum=-0.939;SB=-7349.84	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:119,0:119:99:0,358,4969	0/0:173,0:173:99:0,521,7225	1/1:0,98:98:99:4093,295,0	1/1:0,101:101:99:4218,304,0	1/1:0,168:168:99:7016,506,0	0/0:171,0:171:99:0,515,7141	0/0:153,0:153:99:0,461,6389	0/0:185,0:185:99:0,557,7726	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:155,0:155:99:0,467,6473	0/0:147,0:147:99:0,442,6139	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	0/0:172,0:172:99:0,518,7183	0/0:183,0:183:99:0,551,7642	0/0:161,0:161:99:0,485,6723	0/0:64,0:64:99:0,193,2673	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	4786	.	G	T	15075.50	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.472;DP=3220;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.880;QD=41.76;ReadPosRankSum=1.467;SB=-7433.36	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:89,0:89:99:0,268,3717	0/0:163,0:163:99:0,491,6807	1/1:0,96:96:99:4009,289,0	1/1:0,96:96:99:4009,289,0	1/1:0,169:169:99:7057,509,0	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:147,0:147:99:0,442,6139	0/0:157,0:157:99:0,473,6556	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:175,0:175:99:0,527,7308	0/0:176,0:176:99:0,530,7350	0/0:61,0:61:99:0,184,2547	0/0:184,0:184:99:0,554,7684
gi|293339394|gb|GU595196.1|	4826	.	C	T	5261.82	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.236;DP=3144;Dels=0.00;FS=4.399;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.045;QD=41.76;ReadPosRankSum=1.254;SB=-2463.88	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:81,0:81:99:0,244,3383	1/1:0,126:126:99:5262,379,0	0/0:72,0:72:99:0,217,3007	0/0:96,0:96:99:0,289,4009	0/0:131,0:131:99:0,394,5471	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	0/0:181,0:181:99:0,545,7559	0/0:174,0:174:99:0,524,7266	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	0/0:192,0:192:99:0,578,8018	0/0:165,0:165:99:0,497,6890	0/0:78,0:78:99:0,235,3257	0/0:147,0:147:99:0,442,6139
gi|293339394|gb|GU595196.1|	4828	.	G	A	5136.54	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.412;DP=3131;Dels=0.00;FS=5.666;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.785;QD=41.76;ReadPosRankSum=1.517;SB=-2380.36	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:81,0:81:99:0,244,3383	1/1:0,123:123:99:5137,370,0	0/0:68,0:68:99:0,205,2840	0/0:95,0:95:99:0,286,3967	0/0:135,0:135:99:0,406,5638	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:150,0:150:99:0,452,6264	0/0:181,0:181:99:0,545,7559	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:177,0:177:99:0,533,7392	0/0:177,0:177:99:0,533,7392	0/0:189,0:189:99:0,569,7893	0/0:165,0:165:99:0,497,6890	0/0:78,0:78:99:0,235,3257	0/0:145,0:145:99:0,436,6055
gi|293339394|gb|GU595196.1|	4876	.	T	A	34.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.253;DP=2955;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8839;MQ=254.00;MQ0=0;MQRankSum=-0.140;QD=17.25;ReadPosRankSum=-2.082;SB=-38.87	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:183,0:183:99:0,551,7642	0/0:107,0:107:99:0,322,4468	0/0:135,0:135:99:0,406,5638	0/0:70,0:70:99:0,211,2923	0/0:82,0:82:99:0,247,3424	0/0:132,0:132:99:0,397,5512	0/0:153,0:153:99:0,461,6389	0/0:185,0:185:99:0,557,7726	0/0:157,0:157:99:0,473,6556	0/0:141,0:141:99:0,424,5888	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:152,0:152:99:0,458,6348	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:149,0:149:99:0,448,6222	0/0:142,0:142:99:0,427,5930	1/1:0,2:2:6.02:84,6,0	0/0:130,0:130:99:0,391,5429
gi|293339394|gb|GU595196.1|	4877	.	A	T	34.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.655;DP=2947;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.8839;MQ=254.00;MQ0=0;MQRankSum=0.580;QD=17.25;ReadPosRankSum=-2.415;SB=-38.87	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:183,0:183:99:0,551,7642	0/0:111,0:111:99:0,334,4635	0/0:135,0:135:99:0,406,5638	0/0:71,0:71:99:0,214,2965	0/0:82,0:82:99:0,247,3424	0/0:131,0:131:99:0,394,5471	0/0:154,0:154:99:0,464,6431	0/0:188,0:188:99:0,566,7851	0/0:156,0:156:99:0,470,6515	0/0:135,0:135:99:0,406,5638	0/0:176,0:176:99:0,530,7350	0/0:184,0:184:99:0,554,7684	0/0:146,0:146:99:0,439,6097	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:152,0:152:99:0,458,6348	0/0:141,0:141:99:0,424,5888	1/1:0,2:2:6.02:84,6,0	0/0:127,0:127:99:0,382,5304
gi|293339394|gb|GU595196.1|	4896	.	C	T	12903.96	.	AC=6;AF=0.150;AN=40;BaseQRankSum=1.126;DP=2941;Dels=0.00;FS=2.624;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.903;QD=41.76;ReadPosRankSum=0.432;SB=-5721.18	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:181,0:181:99:0,545,7559	0/0:97,0:97:99:0,292,4051	0/0:135,0:135:99:0,406,5638	1/1:0,79:79:99:3299,238,0	1/1:0,84:84:99:3508,253,0	1/1:0,146:146:99:6097,439,0	0/0:146,0:146:99:0,439,6097	0/0:181,0:181:99:0,545,7559	0/0:161,0:161:99:0,485,6723	0/0:124,0:124:99:0,373,5178	0/0:175,0:175:99:0,527,7308	0/0:193,0:193:99:0,581,8060	0/0:163,0:163:99:0,491,6807	0/0:161,0:161:99:0,485,6723	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	0/0:159,0:159:99:0,479,6640	0/0:148,0:148:99:0,445,6181	./.	0/0:119,0:119:99:0,358,4969
gi|293339394|gb|GU595196.1|	4916	.	G	A	16203.03	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.715;DP=2929;Dels=0.00;FS=17.233;HRun=0;HaplotypeScore=3.6995;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.596;QD=41.76;ReadPosRankSum=0.093;SB=-6848.71	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:185,0:185:99:0,557,7726	1/1:0,85:85:99:3550,256,0	0/0:112,0:112:99:0,337,4677	1/1:0,83:83:99:3466,250,0	1/1:0,87:87:99:3633,262,0	1/1:0,133:133:99:5554,400,0	0/0:144,0:144:99:0,433,6013	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	0/0:143,0:143:99:0,430,5972	0/0:191,0:191:99:0,575,7976	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:148,0:148:99:0,445,6181	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	./.	0/0:128,0:128:99:0,385,5345
gi|293339394|gb|GU595196.1|	4923	.	G	A	3507.89	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.734;DP=2941;Dels=0.00;FS=49.483;HRun=1;HaplotypeScore=3.9995;InbreedingCoeff=0.9990;MQ=254.00;MQ0=0;MQRankSum=-0.331;QD=41.76;ReadPosRankSum=-1.217;SB=-835.22	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:191,0:191:99:0,575,7976	1/1:0,84:84:99:3508,253,0	0/0:114,0:114:99:0,343,4761	0/0:86,0:86:99:0,259,3591	0/0:80,0:80:99:0,241,3341	0/0:135,0:135:99:0,406,5638	0/0:134,0:134:99:0,403,5596	0/0:150,0:150:99:0,452,6264	0/0:167,0:167:99:0,503,6974	0/0:157,0:157:99:0,473,6556	0/0:189,0:189:99:0,569,7893	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:145,0:145:99:0,436,6055	0/0:158,0:158:99:0,476,6598	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:9,0:9:27.09:0,27,376	0/0:140,0:140:99:0,421,5846
gi|293339394|gb|GU595196.1|	4946	.	C	T	1357.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.701;DP=3021;Dels=0.00;FS=20.602;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.035;QD=39.93;ReadPosRankSum=2.233;SB=-334.10	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:169,0:169:99:0,509,7057	0/0:84,0:84:99:0,253,3508	0/0:91,0:91:99:0,274,3800	0/0:90,0:90:99:0,271,3758	0/0:109,0:109:99:0,328,4552	0/0:116,0:116:99:0,349,4844	0/0:143,0:143:99:0,430,5972	0/0:154,0:154:99:0,464,6431	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:187,0:187:99:0,563,7809	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	1/1:0,34:34:99:1420,102,0	0/0:159,0:159:99:0,479,6640
gi|293339394|gb|GU595196.1|	4957	.	C	T	16077.75	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.014;DP=3059;Dels=0.00;FS=7.667;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.015;QD=41.76;ReadPosRankSum=1.233;SB=-6723.43	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	0/0:82,0:82:99:0,247,3424	0/0:110,0:110:99:0,331,4594	1/1:0,94:94:99:3925,283,0	1/1:0,119:119:99:4969,358,0	1/1:0,124:124:99:5178,373,0	0/0:145,0:145:99:0,436,6055	0/0:148,0:148:99:0,445,6181	0/0:157,0:157:99:0,473,6556	0/0:164,0:164:99:0,494,6849	0/0:186,0:186:99:0,560,7767	0/0:188,0:188:99:0,566,7851	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:146,0:146:99:0,439,6097	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	1/1:0,48:48:99:2004,144,0	0/0:155,0:155:99:0,467,6473
gi|293339394|gb|GU595196.1|	4993	.	A	C	25640.86	.	AC=14;AF=0.333;AN=42;BaseQRankSum=1.195;DP=2800;Dels=0.00;FS=193.248;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.238;QD=41.76;ReadPosRankSum=3.697;SB=-6806.95	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:145,0:145:99:0,436,6055	1/1:0,62:62:99:2589,187,0	1/1:0,106:106:99:4427,319,0	1/1:0,81:81:99:3383,244,0	1/1:0,89:89:99:3717,268,0	1/1:0,125:125:99:5220,376,0	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	0/0:133,0:133:99:0,400,5554	0/0:158,0:158:99:0,476,6598	0/0:143,0:143:99:0,430,5972	0/0:167,0:167:99:0,503,6974	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:133,0:133:99:0,400,5554	0/0:166,0:166:99:0,500,6932	0/0:144,0:144:99:0,433,6013	1/1:0,53:53:99:2213,160,0	1/1:0,98:98:99:4093,295,0
gi|293339394|gb|GU595196.1|	5023	.	A	C	314.15	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.510;DP=2559;Dels=0.00;FS=10.485;HRun=1;HaplotypeScore=0.4285;InbreedingCoeff=0.9990;MQ=254.00;MQ0=0;MQRankSum=-0.049;QD=34.91;ReadPosRankSum=-4.230;SB=-41.22	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:126,0:126:99:0,379,5262	1/1:0,9:9:27.09:376,27,0	0/0:80,0:80:99:0,241,3341	0/0:49,0:49:99:0,147,2046	0/0:51,0:51:99:0,154,2130	0/0:109,0:109:99:0,328,4552	0/0:156,0:156:99:0,470,6515	0/0:191,0:191:99:0,575,7976	0/0:134,0:134:99:0,403,5596	0/0:164,0:164:99:0,494,6849	0/0:128,0:128:99:0,385,5345	0/0:158,0:158:99:0,476,6598	0/0:151,0:151:99:0,455,6306	0/0:172,0:172:99:0,518,7183	0/0:147,0:147:99:0,442,6139	0/0:142,0:142:99:0,427,5930	0/0:187,0:187:99:0,563,7809	0/0:121,0:121:99:0,364,5053	0/0:44,0:44:99:0,132,1837	0/0:90,0:90:99:0,271,3758
gi|293339394|gb|GU595196.1|	5030	.	G	A	5428.86	.	AC=4;AF=0.100;AN=40;BaseQRankSum=0.272;DP=2455;Dels=0.00;FS=215.688;HRun=0;HaplotypeScore=13.0483;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.088;QD=41.76;ReadPosRankSum=4.238;SB=-292.34	GT:AD:DP:GQ:PL	0/0:144,0:144:99:0,433,6013	0/0:129,0:129:99:0,388,5387	./.	1/1:0,60:60:99:2506,181,0	0/0:38,0:38:99:0,114,1587	0/0:39,0:39:99:0,117,1629	0/0:86,0:86:99:0,259,3591	0/0:150,0:150:99:0,452,6264	0/0:185,0:185:99:0,557,7726	0/0:141,0:141:99:0,424,5888	0/0:160,0:160:99:0,482,6682	0/0:140,0:140:99:0,421,5846	0/0:156,0:156:99:0,470,6515	0/0:154,0:154:99:0,464,6431	0/0:183,0:183:99:0,551,7642	0/0:140,0:140:99:0,421,5846	0/0:133,0:133:99:0,400,5554	0/0:192,0:192:99:0,578,8018	0/0:118,0:118:99:0,355,4928	0/0:37,0:37:99:0,111,1545	1/1:0,70:70:99:2923,211,0
gi|293339394|gb|GU595196.1|	5035	.	A	G	5762.94	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.072;DP=2393;Dels=0.00;FS=36.106;HRun=0;HaplotypeScore=12.6174;InbreedingCoeff=0.9380;MQ=254.00;MQ0=0;MQRankSum=0.869;QD=41.76;ReadPosRankSum=5.367;SB=-1545.15	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:131,0:131:99:0,394,5471	0/0:1,0:1:3.01:0,3,42	0/0:54,0:54:99:0,163,2255	1/1:0,33:33:99:1378,99,0	1/1:0,35:35:99:1462,105,0	1/1:0,70:70:99:2923,211,0	0/0:136,0:136:99:0,409,5679	0/0:165,0:165:99:0,497,6890	0/0:134,0:134:99:0,403,5596	0/0:153,0:153:99:0,461,6389	0/0:148,0:148:99:0,445,6181	0/0:148,0:148:99:0,445,6181	0/0:152,0:152:99:0,458,6348	0/0:184,0:184:99:0,554,7684	0/0:141,0:141:99:0,424,5888	0/0:126,0:126:99:0,379,5262	0/0:199,0:199:99:0,599,8310	0/0:127,0:127:99:0,382,5304	0/0:34,0:34:99:0,102,1420	0/0:79,0:79:99:0,238,3299
gi|293339394|gb|GU595196.1|	5037	.	C	G	12110.52	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-1.541;DP=2393;Dels=0.00;FS=196.847;HRun=0;HaplotypeScore=12.3793;InbreedingCoeff=0.9638;MQ=254.00;MQ0=0;MQRankSum=0.491;QD=41.76;ReadPosRankSum=5.078;SB=-2129.80	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:129,0:129:99:0,388,5387	1/1:0,1:1:3.01:42,3,0	1/1:0,55:55:99:2297,166,0	1/1:0,28:28:84.28:1169,84,0	1/1:0,33:33:99:1378,99,0	1/1:0,64:64:99:2673,193,0	0/0:140,0:140:99:0,421,5846	0/0:161,0:161:99:0,485,6723	0/0:136,0:136:99:0,409,5679	0/0:152,0:152:99:0,458,6348	0/0:148,0:148:99:0,445,6181	0/0:152,0:152:99:0,458,6348	0/0:154,0:154:99:0,464,6431	0/0:183,0:183:99:0,551,7642	0/0:148,0:148:99:0,445,6181	0/0:128,0:128:99:0,385,5345	0/0:202,0:202:99:0,608,8436	0/0:122,0:122:99:0,367,5095	1/1:0,27:27:81.27:1128,81,0	1/1:0,82:82:99:3424,247,0
gi|293339394|gb|GU595196.1|	5056	.	T	A	439.08	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.072;DP=2382;Dels=0.00;FS=4.205;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8486;MQ=254.00;MQ0=0;MQRankSum=1.047;QD=36.59;ReadPosRankSum=-3.754;SB=-124.75	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:139,0:139:99:0,418,5805	0/0:1,0:1:3.01:0,3,42	0/0:65,0:65:99:0,196,2714	0/0:15,0:15:45.15:0,45,626	0/0:31,0:31:93.31:0,93,1295	0/0:59,0:59:99:0,178,2464	0/0:139,0:139:99:0,418,5805	0/0:162,0:162:99:0,488,6765	0/0:134,0:134:99:0,403,5596	0/0:145,0:145:99:0,436,6055	0/0:156,0:156:99:0,470,6515	0/0:147,0:147:99:0,442,6139	0/0:151,0:151:99:0,455,6306	0/0:176,0:176:99:0,530,7350	0/0:150,0:150:99:0,452,6264	0/0:135,0:135:99:0,406,5638	0/0:184,0:184:99:0,554,7684	0/0:120,0:120:99:0,361,5011	1/1:0,12:12:36.12:501,36,0	0/0:102,0:102:99:0,307,4260
gi|293339394|gb|GU595196.1|	5067	.	A	C	8936.73	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-0.478;DP=2253;Dels=0.00;FS=263.777;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9259;MQ=254.00;MQ0=0;MQRankSum=-0.467;QD=41.76;ReadPosRankSum=8.104;SB=-876.50	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:137,0:137:99:0,412,5721	1/1:0,1:1:3.01:42,3,0	1/1:0,62:62:99:2589,187,0	1/1:0,7:7:21.07:292,21,0	1/1:0,21:21:63.21:877,63,0	1/1:0,23:23:69.23:960,69,0	0/0:137,0:137:99:0,412,5721	0/0:155,0:155:99:0,467,6473	0/0:131,0:131:99:0,394,5471	0/0:131,0:131:99:0,394,5471	0/0:162,0:162:99:0,488,6765	0/0:150,0:150:99:0,452,6264	0/0:148,0:148:99:0,445,6181	0/0:161,0:161:99:0,485,6723	0/0:159,0:159:99:0,479,6640	0/0:138,0:138:99:0,415,5763	0/0:163,0:163:99:0,491,6807	0/0:113,0:113:99:0,340,4719	1/1:0,1:1:3.01:42,3,0	1/1:0,99:99:99:4134,298,0
gi|293339394|gb|GU595196.1|	5081	.	C	T	4009.01	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.686;DP=2369;Dels=0.00;FS=99.541;HRun=0;HaplotypeScore=0.8570;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=1.445;QD=41.76;ReadPosRankSum=-2.661;SB=-459.38	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:145,0:145:99:0,436,6055	1/1:0,18:18:54.18:752,54,0	0/0:93,0:93:99:0,280,3884	1/1:0,24:24:72.24:1002,72,0	1/1:0,21:21:63.21:877,63,0	1/1:0,23:23:69.23:960,69,0	0/0:143,0:143:99:0,430,5972	0/0:166,0:166:99:0,500,6932	0/0:138,0:138:99:0,415,5763	0/0:134,0:134:99:0,403,5596	0/0:157,0:157:99:0,473,6556	0/0:158,0:158:99:0,476,6598	0/0:144,0:144:99:0,433,6013	0/0:151,0:151:99:0,455,6306	0/0:160,0:160:99:0,482,6682	0/0:160,0:160:99:0,482,6682	0/0:152,0:152:99:0,458,6348	0/0:98,0:98:99:0,295,4093	1/1:0,10:10:30.10:418,30,0	0/0:121,0:121:99:0,364,5053
gi|293339394|gb|GU595196.1|	5086	.	G	A	898.15	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-2.115;DP=2402;Dels=0.00;FS=53.257;HRun=1;HaplotypeScore=1.0951;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-0.606;QD=39.05;ReadPosRankSum=-1.327;SB=-0.02	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:145,0:145:99:0,436,6055	1/1:0,23:23:69.23:960,69,0	0/0:96,0:96:99:0,289,4009	0/0:28,0:28:84.28:0,84,1169	0/0:28,0:28:84.28:0,84,1169	0/0:31,0:31:93.31:0,93,1295	0/0:140,0:140:99:0,421,5846	0/0:168,0:168:99:0,506,7016	0/0:148,0:148:99:0,445,6181	0/0:140,0:140:99:0,421,5846	0/0:154,0:154:99:0,464,6431	0/0:163,0:163:99:0,491,6807	0/0:147,0:147:99:0,442,6139	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	0/0:146,0:146:99:0,439,6097	0/0:92,0:92:99:0,277,3842	0/0:10,0:10:30.10:0,30,418	0/0:112,0:112:99:0,337,4677
gi|293339394|gb|GU595196.1|	5102	.	T	G	4468.37	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.764;DP=2455;Dels=0.00;FS=126.654;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.541;QD=41.76;ReadPosRankSum=-0.701;SB=-417.62	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:159,0:159:99:0,479,6640	0/0:46,0:46:99:0,138,1921	0/0:88,0:88:99:0,265,3675	1/1:0,38:38:99:1587,114,0	1/1:0,31:31:93.31:1295,93,0	1/1:0,38:38:99:1587,114,0	0/0:132,0:132:99:0,397,5512	0/0:155,0:155:99:0,467,6473	0/0:145,0:145:99:0,436,6055	0/0:130,0:130:99:0,391,5429	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	0/0:150,0:150:99:0,452,6264	0/0:144,0:144:99:0,433,6013	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:80,0:80:99:0,241,3341	0/0:19,0:19:57.19:0,57,793	0/0:88,0:88:99:0,265,3675
gi|293339394|gb|GU595196.1|	5116	.	G	A	4718.94	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.549;DP=2506;Dels=0.00;FS=151.211;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.014;QD=41.76;ReadPosRankSum=2.887;SB=-417.62	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:153,0:153:99:0,461,6389	0/0:49,0:49:99:0,147,2046	0/0:65,0:65:99:0,196,2714	0/0:53,0:53:99:0,160,2213	1/1:0,49:49:99:2046,147,0	1/1:0,64:64:99:2673,193,0	0/0:139,0:139:99:0,418,5805	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	0/0:150,0:150:99:0,452,6264	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:141,0:141:99:0,424,5888	0/0:154,0:154:99:0,464,6431	0/0:162,0:162:99:0,488,6765	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	0/0:79,0:79:99:0,238,3299	0/0:21,0:21:63.21:0,63,877	0/0:55,0:55:99:0,166,2297
gi|293339394|gb|GU595196.1|	5129	.	C	A	3087.29	.	AC=4;AF=0.095;AN=42;BaseQRankSum=2.684;DP=2509;Dels=0.00;FS=192.442;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.694;QD=40.62;ReadPosRankSum=-3.339;SB=-0.02	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:153,0:153:99:0,461,6389	0/0:34,0:34:99:0,102,1420	1/1:0,39:39:99:1629,117,0	0/0:46,0:46:99:0,138,1921	0/0:63,0:63:99:0,190,2631	0/0:90,0:90:99:0,271,3758	0/0:143,0:143:99:0,430,5972	0/0:160,0:160:99:0,482,6682	0/0:150,0:150:99:0,452,6264	0/0:160,0:160:99:0,482,6682	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	0/0:146,0:146:99:0,439,6097	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	0/0:155,0:155:99:0,467,6473	0/0:194,0:194:99:0,584,8102	0/0:79,0:79:99:0,238,3299	0/0:14,0:14:42.14:0,42,585	1/1:0,37:37:99:1545,111,0
gi|293339394|gb|GU595196.1|	5147	.	A	T	1055.84	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.762;DP=2415;Dels=0.00;FS=72.338;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9656;MQ=254.00;MQ0=0;MQRankSum=-1.192;QD=37.71;ReadPosRankSum=-6.766;SB=-0.02	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:131,0:131:99:0,394,5471	1/1:0,11:11:33.11:459,33,0	1/1:0,2:2:6.02:84,6,0	0/0:43,0:43:99:0,129,1796	0/0:54,0:54:99:0,163,2255	0/0:87,0:87:99:0,262,3633	0/0:138,0:138:99:0,415,5763	0/0:160,0:160:99:0,482,6682	0/0:140,0:140:99:0,421,5846	0/0:182,0:182:99:0,548,7600	0/0:191,0:191:99:0,575,7976	0/0:161,0:161:99:0,485,6723	0/0:152,0:152:99:0,458,6348	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	0/0:188,0:188:99:0,566,7851	0/0:91,0:91:99:0,274,3800	1/1:0,6:6:18.06:251,18,0	1/1:0,9:9:27.09:376,27,0
gi|293339394|gb|GU595196.1|	5154	.	A	G	100.50	.	AC=4;AF=0.105;AN=38;BaseQRankSum=0.914;DP=2416;Dels=0.00;FS=8.803;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8772;MQ=254.00;MQ0=0;MQRankSum=0.231;QD=25.12;ReadPosRankSum=-3.177;SB=-0.02	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:140,0:140:99:0,421,5846	1/1:0,2:2:6.02:84,6,0	./.	0/0:35,0:35:99:0,105,1462	0/0:52,0:52:99:0,157,2172	0/0:88,0:88:99:0,265,3675	0/0:141,0:141:99:0,424,5888	0/0:160,0:160:99:0,482,6682	0/0:142,0:142:99:0,427,5930	0/0:183,0:183:99:0,551,7642	0/0:186,0:186:99:0,560,7767	0/0:166,0:166:99:0,500,6932	0/0:149,0:149:99:0,448,6222	0/0:187,0:187:99:0,563,7809	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:186,0:186:99:0,560,7767	0/0:101,0:101:99:0,304,4218	1/1:0,2:2:6.02:84,6,0	./.
gi|293339394|gb|GU595196.1|	5169	.	G	A	397.62	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.689;DP=2475;Dels=0.00;FS=24.659;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9916;MQ=254.00;MQ0=0;MQRankSum=-0.253;QD=36.15;ReadPosRankSum=-2.652;SB=-0.01	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:155,0:155:99:0,467,6473	0/0:12,0:12:36.12:0,36,501	1/1:0,11:11:33.11:459,33,0	0/0:32,0:32:96.32:0,96,1336	0/0:48,0:48:99:0,144,2004	0/0:82,0:82:99:0,247,3424	0/0:140,0:140:99:0,421,5846	0/0:171,0:171:99:0,515,7141	0/0:136,0:136:99:0,409,5679	0/0:190,0:190:99:0,572,7934	0/0:193,0:193:99:0,581,8060	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	0/0:198,0:198:99:0,596,8269	0/0:158,0:158:99:0,476,6598	0/0:163,0:163:99:0,491,6807	0/0:183,0:183:99:0,551,7642	0/0:116,0:116:99:0,349,4844	0/0:6,0:6:18.06:0,18,251	./.
gi|293339394|gb|GU595196.1|	5183	.	A	G	1208.11	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.329;DP=2462;Dels=0.00;FS=50.179;HRun=1;HaplotypeScore=3.0472;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.587;QD=38.97;ReadPosRankSum=-2.564;SB=-83.54	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:153,0:153:99:0,461,6389	0/0:14,0:14:42.14:0,42,585	0/0:21,0:21:63.21:0,63,877	0/0:32,0:32:96.32:0,96,1336	0/0:43,0:43:99:0,129,1796	0/0:74,0:74:99:0,223,3090	0/0:136,0:136:99:0,409,5679	0/0:176,0:176:99:0,530,7350	0/0:148,0:148:99:0,445,6181	0/0:165,0:165:99:0,497,6890	0/0:182,0:182:99:0,548,7600	0/0:157,0:157:99:0,473,6556	0/0:176,0:176:99:0,530,7350	0/0:186,0:186:99:0,560,7767	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:116,0:116:99:0,349,4844	1/1:0,19:19:57.19:793,57,0	1/1:0,12:12:36.12:501,36,0
gi|293339394|gb|GU595196.1|	5187	.	A	G	7308.08	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.202;DP=2481;Dels=0.00;FS=4.151;HRun=2;HaplotypeScore=3.1901;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.290;QD=41.76;ReadPosRankSum=-0.262;SB=-2923.24	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:160,0:160:99:0,482,6682	0/0:14,0:14:42.14:0,42,585	0/0:21,0:21:63.21:0,63,877	1/1:0,31:31:93.31:1295,93,0	0/0:43,0:43:99:0,129,1796	0/0:75,0:75:99:0,226,3132	1/1:0,144:144:99:6013,433,0	0/0:180,0:180:99:0,542,7517	0/0:151,0:151:99:0,455,6306	0/0:161,0:161:99:0,485,6723	0/0:185,0:185:99:0,557,7726	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:157,0:157:99:0,473,6556	0/0:176,0:176:99:0,530,7350	0/0:117,0:117:99:0,352,4886	0/0:19,0:19:57.19:0,57,793	0/0:15,0:15:45.15:0,45,626
gi|293339394|gb|GU595196.1|	5190	.	T	A	9229.05	.	AC=8;AF=0.190;AN=42;BaseQRankSum=1.036;DP=2477;Dels=0.00;FS=38.126;HRun=0;HaplotypeScore=3.1901;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.378;QD=41.76;ReadPosRankSum=0.420;SB=-2881.48	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:158,0:158:99:0,476,6598	0/0:14,0:14:42.14:0,42,585	1/1:0,21:21:63.21:877,63,0	1/1:0,32:32:96.32:1336,96,0	0/0:42,0:42:99:0,126,1754	0/0:72,0:72:99:0,217,3007	1/1:0,148:148:99:6181,445,0	0/0:181,0:181:99:0,545,7559	0/0:154,0:154:99:0,464,6431	0/0:155,0:155:99:0,467,6473	0/0:180,0:180:99:0,542,7517	0/0:161,0:161:99:0,485,6723	0/0:166,0:166:99:0,500,6932	0/0:186,0:186:99:0,560,7767	0/0:171,0:171:99:0,515,7141	0/0:151,0:151:99:0,455,6306	0/0:180,0:180:99:0,542,7517	0/0:115,0:115:99:0,346,4802	0/0:19,0:19:57.19:0,57,793	1/1:0,20:20:60.20:835,60,0
gi|293339394|gb|GU595196.1|	5230	.	G	C	73.93	.	AC=2;AF=0.053;AN=38;BaseQRankSum=0.714;DP=1717;Dels=0.00;FS=6.005;HRun=2;HaplotypeScore=0.1579;InbreedingCoeff=0.9375;MQ=254.00;MQ0=0;MQRankSum=-0.569;QD=24.64;ReadPosRankSum=-2.604;SB=-0.02	GT:AD:DP:GQ:PL	0/0:110,0:110:99:0,331,4594	0/0:93,0:93:99:0,280,3884	./.	./.	0/0:16,0:16:48.16:0,48,668	0/0:25,0:25:75.25:0,75,1044	0/0:10,0:10:30.10:0,30,418	0/0:105,0:105:99:0,316,4385	0/0:156,0:156:99:0,470,6515	0/0:113,0:113:99:0,340,4719	0/0:106,0:106:99:0,319,4427	0/0:102,0:102:99:0,307,4260	0/0:118,0:118:99:0,355,4928	0/0:95,0:95:99:0,286,3967	0/0:167,0:167:99:0,503,6974	0/0:114,0:114:99:0,343,4761	0/0:110,0:110:99:0,331,4594	0/0:173,0:173:99:0,521,7225	0/0:87,0:87:99:0,262,3633	1/1:0,3:3:9.03:125,9,0	0/0:14,0:14:42.14:0,42,585
gi|293339394|gb|GU595196.1|	5240	.	A	G	74.46	.	AC=2;AF=0.059;AN=34;BaseQRankSum=0.245;DP=1358;Dels=0.00;FS=6.028;HRun=3;HaplotypeScore=0.2353;InbreedingCoeff=0.9374;MQ=254.00;MQ0=0;MQRankSum=0.099;QD=24.82;ReadPosRankSum=-2.822;SB=-0.02	GT:AD:DP:GQ:PL	0/0:82,0:82:99:0,247,3424	0/0:65,0:65:99:0,196,2714	./.	./.	0/0:11,0:11:33.11:0,33,459	0/0:17,0:17:51.17:0,51,710	./.	0/0:71,0:71:99:0,214,2965	0/0:156,0:156:99:0,470,6515	0/0:83,0:83:99:0,250,3466	0/0:79,0:79:99:0,238,3299	0/0:68,0:68:99:0,205,2840	0/0:83,0:83:99:0,250,3466	0/0:67,0:67:99:0,202,2798	0/0:180,0:180:99:0,542,7517	0/0:76,0:76:99:0,229,3174	0/0:82,0:82:99:0,247,3424	0/0:165,0:165:99:0,497,6890	0/0:70,0:70:99:0,211,2923	./.	1/1:0,3:3:9.03:125,9,0
gi|293339394|gb|GU595196.1|	5243	.	G	A	30944.43	.	AC=26;AF=0.813;AN=32;BaseQRankSum=0.407;DP=1233;Dels=0.00;FS=6.107;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-1.435;QD=41.76;ReadPosRankSum=-7.212;SB=-14908.46	GT:AD:DP:GQ:PL	1/1:0,72:72:99:3007,217,0	1/1:0,52:52:99:2172,157,0	./.	./.	1/1:0,11:11:33.11:459,33,0	1/1:0,15:15:45.15:626,45,0	./.	1/1:0,65:65:99:2714,196,0	0/0:156,0:156:99:0,470,6515	1/1:0,69:69:99:2881,208,0	1/1:0,66:66:99:2756,199,0	1/1:0,58:58:99:2422,175,0	1/1:0,69:69:99:2881,208,0	1/1:0,61:61:99:2547,184,0	0/0:174,0:174:99:0,524,7266	1/1:0,71:71:99:2965,214,0	1/1:0,70:70:99:2923,211,0	0/0:162,0:162:99:0,488,6765	1/1:0,62:62:99:2589,187,0	./.	./.
gi|293339394|gb|GU595196.1|	5244	.	A	G	30777.38	.	AC=26;AF=0.813;AN=32;BaseQRankSum=0.006;DP=1230;Dels=0.00;FS=6.977;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9998;MQ=254.00;MQ0=0;MQRankSum=-1.695;QD=41.76;ReadPosRankSum=-9.530;SB=-14741.42	GT:AD:DP:GQ:PL	1/1:0,72:72:99:3007,217,0	1/1:0,50:50:99:2088,151,0	./.	./.	1/1:0,10:10:30.10:418,30,0	1/1:0,14:14:42.14:585,42,0	./.	1/1:0,66:66:99:2756,199,0	0/0:157,0:157:99:0,473,6556	1/1:0,66:66:99:2756,199,0	1/1:0,64:64:99:2673,193,0	1/1:0,62:62:99:2589,187,0	1/1:0,68:68:99:2840,205,0	1/1:0,65:65:99:2714,196,0	0/0:175,0:175:99:0,527,7308	1/1:0,71:71:99:2965,214,0	1/1:0,71:71:99:2965,214,0	0/0:161,0:161:99:0,485,6723	1/1:0,58:58:99:2422,175,0	./.	./.
gi|293339394|gb|GU595196.1|	5263	.	A	G	29566.33	.	AC=20;AF=0.769;AN=26;BaseQRankSum=-0.559;DP=1223;Dels=0.00;FS=1.915;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.478;QD=41.76;ReadPosRankSum=-5.219;SB=-14407.33	GT:AD:DP:GQ:PL	1/1:0,76:76:99:3174,229,0	1/1:0,82:82:99:3424,247,0	./.	./.	./.	./.	./.	1/1:0,72:72:99:3007,217,0	0/0:181,0:181:99:0,545,7559	1/1:0,58:58:99:2422,175,0	1/1:0,65:65:99:2714,196,0	1/1:0,69:69:99:2881,208,0	1/1:0,74:74:99:3090,223,0	1/1:0,63:63:99:2631,190,0	0/0:178,0:178:99:0,536,7433	1/1:0,78:78:99:3257,235,0	1/1:0,71:71:99:2965,214,0	0/0:156,0:156:99:0,470,6515	./.	./.	./.
gi|293339394|gb|GU595196.1|	5339	.	C	A	567.11	.	AC=2;AF=0.067;AN=30;BaseQRankSum=0.499;DP=2266;Dels=0.00;FS=46.701;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9434;MQ=254.00;MQ0=0;MQRankSum=-0.371;QD=37.81;ReadPosRankSum=1.769;SB=-0.02	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:154,0:154:99:0,464,6431	./.	./.	./.	./.	1/1:0,15:15:45.15:626,45,0	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:194,0:194:99:0,584,8102	0/0:188,0:188:99:0,566,7851	0/0:186,0:186:99:0,560,7767	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:160,0:160:99:0,482,6682	0/0:171,0:171:99:0,515,7141	./.	0/0:3,0:3:9.03:0,9,125	./.
gi|293339394|gb|GU595196.1|	5371	.	G	T	389.10	.	AC=4;AF=0.133;AN=30;BaseQRankSum=0.409;DP=2141;Dels=0.00;FS=34.937;HRun=0;HaplotypeScore=0.0667;InbreedingCoeff=0.8961;MQ=254.00;MQ0=0;MQRankSum=-0.137;QD=35.37;ReadPosRankSum=-3.815;SB=-0.02	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:169,0:169:99:0,509,7057	./.	./.	./.	./.	1/1:0,10:10:30.10:418,30,0	0/0:154,0:154:99:0,464,6431	0/0:160,0:160:99:0,482,6682	0/0:187,0:187:99:0,563,7809	0/0:187,0:187:99:0,563,7809	0/0:162,0:162:99:0,488,6765	0/0:148,0:148:99:0,445,6181	0/0:161,0:161:99:0,485,6723	0/0:184,0:184:99:0,554,7684	0/0:162,0:162:99:0,488,6765	0/0:138,0:138:99:0,415,5763	0/0:172,0:172:99:0,518,7183	./.	1/1:0,1:1:3.01:42,3,0	./.
gi|293339394|gb|GU595196.1|	5377	.	T	G	114.41	.	AC=2;AF=0.067;AN=30;BaseQRankSum=-0.600;DP=2072;Dels=0.00;FS=2.035;HRun=1;HaplotypeScore=0.1333;InbreedingCoeff=0.8698;MQ=254.00;MQ0=0;MQRankSum=1.530;QD=28.60;ReadPosRankSum=-3.438;SB=-39.02	GT:AD:DP:GQ:PL	0/0:141,0:141:99:0,424,5888	0/0:161,0:161:99:0,485,6723	./.	./.	./.	./.	0/0:2,0:2:6.02:0,6,84	0/0:141,0:141:99:0,424,5888	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:152,0:152:99:0,458,6348	0/0:153,0:153:99:0,461,6389	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:155,0:155:99:0,467,6473	0/0:129,0:129:99:0,388,5387	0/0:169,0:169:99:0,509,7057	1/1:0,4:4:12.04:167,12,0	./.	./.
gi|293339394|gb|GU595196.1|	5378	.	G	T	114.69	.	AC=2;AF=0.071;AN=28;BaseQRankSum=-0.429;DP=2068;Dels=0.00;FS=2.036;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9674;MQ=254.00;MQ0=0;MQRankSum=0.274;QD=28.67;ReadPosRankSum=-3.062;SB=-39.30	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:161,0:161:99:0,485,6723	./.	./.	./.	./.	./.	0/0:139,0:139:99:0,418,5805	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:179,0:179:99:0,539,7475	0/0:149,0:149:99:0,448,6222	0/0:155,0:155:99:0,467,6473	0/0:167,0:167:99:0,503,6974	0/0:184,0:184:99:0,554,7684	0/0:155,0:155:99:0,467,6473	0/0:129,0:129:99:0,388,5387	0/0:172,0:172:99:0,518,7183	1/1:0,4:4:12.04:167,12,0	./.	./.
gi|293339394|gb|GU595196.1|	5606	.	G	A	205.35	.	AC=1;AF=0.036;AN=28;BaseQRankSum=1.889;DP=2229;Dels=0.00;FS=0.000;HRun=4;HaplotypeScore=1.1427;InbreedingCoeff=-0.0370;MQ=254.00;MQ0=0;MQRankSum=0.978;QD=7.08;ReadPosRankSum=-4.285;SB=-118.90	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:167,0:167:99:0,503,6974	./.	./.	./.	./.	./.	0/0:180,0:180:99:0,542,7517	0/0:184,0:184:99:0,554,7684	0/0:176,0:176:99:0,530,7350	0/0:167,0:167:99:0,503,6974	0/0:191,0:191:99:0,575,7976	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:166,0:166:99:0,500,6932	0/1:21,8:29:99:247,0,790	0/0:175,0:175:99:0,527,7308	0/0:130,0:130:99:0,391,5429	./.	./.
gi|293339394|gb|GU595196.1|	5609	.	A	G	610.91	.	AC=1;AF=0.036;AN=28;BaseQRankSum=-0.731;DP=2254;Dels=0.00;FS=0.884;HRun=3;HaplotypeScore=1.6426;InbreedingCoeff=-0.0370;MQ=254.00;MQ0=0;MQRankSum=-0.970;QD=18.51;ReadPosRankSum=-5.765;SB=-321.68	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:165,0:165:99:0,497,6890	./.	./.	./.	./.	./.	0/0:175,0:175:99:0,527,7308	0/0:188,0:188:99:0,566,7851	0/0:182,0:182:99:0,548,7600	0/0:176,0:176:99:0,530,7350	0/0:185,0:185:99:0,557,7726	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/1:15,18:33:99:652,0,527	0/0:175,0:175:99:0,527,7308	0/0:137,0:137:99:0,412,5721	./.	./.
gi|293339394|gb|GU595196.1|	5612	.	A	T	333.26	.	AC=1;AF=0.036;AN=28;BaseQRankSum=0.138;DP=2233;Dels=0.00;FS=2.482;HRun=1;HaplotypeScore=1.6426;InbreedingCoeff=-0.0370;MQ=254.00;MQ0=0;MQRankSum=0.007;QD=7.93;ReadPosRankSum=-5.050;SB=-148.62	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:160,0:160:99:0,482,6682	./.	./.	./.	./.	./.	0/0:172,0:172:99:0,518,7183	0/0:184,0:184:99:0,554,7684	0/0:181,0:181:99:0,545,7559	0/0:169,0:169:99:0,509,7057	0/0:182,0:182:99:0,548,7600	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/1:30,12:42:99:375,0,1126	0/0:173,0:173:99:0,521,7225	0/0:142,0:142:99:0,427,5930	./.	./.
gi|293339394|gb|GU595196.1|	5613	.	T	A	288.49	.	AC=1;AF=0.036;AN=28;BaseQRankSum=-0.379;DP=2220;Dels=0.00;FS=1.164;HRun=4;HaplotypeScore=1.5712;InbreedingCoeff=-0.0370;MQ=254.00;MQ0=0;MQRankSum=-0.370;QD=6.71;ReadPosRankSum=-5.268;SB=-148.62	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:155,0:155:99:0,467,6473	./.	./.	./.	./.	./.	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	0/0:181,0:181:99:0,545,7559	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/1:32,11:43:99:330,0,1207	0/0:170,0:170:99:0,512,7099	0/0:142,0:142:99:0,427,5930	./.	./.
gi|293339394|gb|GU595196.1|	6424	.	G	A	46.96	.	AC=1;AF=0.036;AN=28;BaseQRankSum=0.780;DP=2219;Dels=0.00;FS=6.696;HRun=8;HaplotypeScore=0.4285;InbreedingCoeff=-0.0370;MQ=254.00;MQ0=0;MQRankSum=-0.805;QD=1.17;ReadPosRankSum=-3.724;SB=-0.02	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	./.	./.	./.	./.	./.	0/0:165,0:165:99:0,497,6890	0/0:157,0:157:99:0,473,6556	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/1:35,5:40:88.40:88,0,1341	0/0:140,0:140:99:0,421,5846	0/0:168,0:168:99:0,506,7016	0/0:195,0:195:99:0,587,8143	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	./.	./.
gi|293339394|gb|GU595196.1|	6433	.	C	A	55.61	.	AC=1;AF=0.036;AN=28;BaseQRankSum=0.813;DP=2231;Dels=0.00;FS=6.591;HRun=8;HaplotypeScore=0.4999;InbreedingCoeff=-0.0370;MQ=254.00;MQ0=0;MQRankSum=0.437;QD=1.09;ReadPosRankSum=-3.962;SB=-0.02	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:175,0:175:99:0,527,7308	./.	./.	./.	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:157,0:157:99:0,473,6556	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/1:45,6:51:97.05:97,0,1726	0/0:142,0:142:99:0,427,5930	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:185,0:185:99:0,557,7726	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:156,0:156:99:0,470,6515	./.	./.
gi|293339394|gb|GU595196.1|	10483	.	A	C	193.69	.	AC=1;AF=0.036;AN=28;BaseQRankSum=-0.080;DP=2214;Dels=0.00;FS=18.036;HRun=4;HaplotypeScore=0.4285;InbreedingCoeff=-0.0370;MQ=254.00;MQ0=0;MQRankSum=-0.776;QD=10.19;ReadPosRankSum=-4.283;SB=-0.02	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	./.	./.	./.	./.	./.	0/0:159,0:159:99:0,479,6640	0/0:182,0:182:99:0,548,7600	0/0:177,0:177:99:0,533,7392	0/0:179,0:179:99:0,539,7475	0/1:12,7:19:99:235,0,444	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	./.	./.
gi|293339394|gb|GU595196.1|	10484	.	G	A	116.19	.	AC=1;AF=0.036;AN=28;BaseQRankSum=1.547;DP=2230;Dels=0.00;FS=12.035;HRun=1;HaplotypeScore=0.4285;InbreedingCoeff=-0.0370;MQ=254.00;MQ0=0;MQRankSum=0.654;QD=6.83;ReadPosRankSum=-3.714;SB=-0.02	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:168,0:168:99:0,506,7016	./.	./.	./.	./.	./.	0/0:163,0:163:99:0,491,6807	0/0:179,0:179:99:0,539,7475	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/1:12,5:17:99:158,0,450	0/0:177,0:177:99:0,533,7392	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:154,0:154:99:0,464,6431	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:179,0:179:99:0,539,7475	./.	./.
gi|293339394|gb|GU595196.1|	11457	.	C	A	400.71	.	AC=2;AF=0.071;AN=28;BaseQRankSum=-0.163;DP=2206;Dels=0.00;FS=2.597;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=-0.543;QD=36.43;ReadPosRankSum=-5.333;SB=-165.64	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	./.	./.	./.	./.	./.	0/0:152,0:152:99:0,458,6348	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	1/1:0,11:11:33.11:459,33,0	0/0:157,0:157:99:0,473,6556	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:201,0:201:99:0,605,8394	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	./.	./.
gi|293339394|gb|GU595196.1|	11458	.	A	T	194.45	.	AC=2;AF=0.071;AN=28;BaseQRankSum=-0.485;DP=2212;Dels=0.00;FS=1.625;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9917;MQ=254.00;MQ0=0;MQRankSum=-0.077;QD=32.41;ReadPosRankSum=-4.166;SB=-79.79	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	./.	./.	./.	./.	./.	0/0:154,0:154:99:0,464,6431	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	1/1:0,6:6:18.06:251,18,0	0/0:156,0:156:99:0,470,6515	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:198,0:198:99:0,596,8269	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:158,0:158:99:0,476,6598	./.	./.
gi|293339394|gb|GU595196.1|	11468	.	C	G	114.69	.	AC=2;AF=0.071;AN=28;BaseQRankSum=0.277;DP=2215;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9674;MQ=254.00;MQ0=0;MQRankSum=-0.196;QD=28.67;ReadPosRankSum=-3.213;SB=-78.34	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	./.	./.	./.	./.	./.	0/0:153,0:153:99:0,461,6389	0/0:164,0:164:99:0,494,6849	0/0:184,0:184:99:0,554,7684	0/0:173,0:173:99:0,521,7225	1/1:0,4:4:12.04:167,12,0	0/0:159,0:159:99:0,479,6640	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:183,0:183:99:0,551,7642	0/0:181,0:181:99:0,545,7559	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	./.	./.
gi|293339394|gb|GU595196.1|	11470	.	C	A	400.71	.	AC=2;AF=0.071;AN=28;BaseQRankSum=0.799;DP=2225;Dels=0.00;FS=1.117;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=0.950;QD=36.43;ReadPosRankSum=-5.033;SB=-206.28	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	./.	./.	./.	./.	./.	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	0/0:184,0:184:99:0,554,7684	0/0:177,0:177:99:0,533,7392	1/1:0,11:11:33.11:459,33,0	0/0:160,0:160:99:0,482,6682	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	./.	./.
gi|293339394|gb|GU595196.1|	15908	.	G	C	141.45	.	AC=4;AF=0.125;AN=32;BaseQRankSum=1.524;DP=2388;Dels=0.00;FS=15.363;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9047;MQ=254.00;MQ0=0;MQRankSum=0.251;QD=28.29;ReadPosRankSum=-3.837;SB=-0.02	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:186,0:186:99:0,560,7767	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	./.	./.	./.	0/0:176,0:176:99:0,530,7350	0/0:143,0:143:99:0,430,5972	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:156,0:156:99:0,470,6515	0/0:153,0:153:99:0,461,6389	0/0:175,0:175:99:0,527,7308	0/0:195,0:195:99:0,587,8143	0/0:189,0:189:99:0,569,7893	0/0:140,0:140:99:0,421,5846	0/0:178,0:178:99:0,536,7433	./.	./.
gi|293339394|gb|GU595196.1|	15909	.	A	C	141.45	.	AC=4;AF=0.125;AN=32;BaseQRankSum=-0.426;DP=2399;Dels=0.00;FS=15.426;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9047;MQ=254.00;MQ0=0;MQRankSum=-0.025;QD=28.29;ReadPosRankSum=-3.364;SB=-0.02	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:181,0:181:99:0,545,7559	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	./.	./.	./.	0/0:176,0:176:99:0,530,7350	0/0:149,0:149:99:0,448,6222	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:180,0:180:99:0,542,7517	0/0:153,0:153:99:0,461,6389	0/0:149,0:149:99:0,448,6222	0/0:178,0:178:99:0,536,7433	0/0:193,0:193:99:0,581,8060	0/0:188,0:188:99:0,566,7851	0/0:142,0:142:99:0,427,5930	0/0:184,0:184:99:0,554,7684	./.	./.
gi|293339394|gb|GU595196.1|	16797	.	T	C	82810.76	.	AC=24;AF=0.750;AN=32;BaseQRankSum=0.922;DP=2647;Dels=0.00;FS=0.158;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.150;QD=41.76;ReadPosRankSum=-1.926;SB=-39922.90	GT:AD:DP:GQ:PL	1/1:0,165:165:99:6890,497,0	1/1:0,148:148:99:6181,445,0	1/1:0,126:126:99:5262,379,0	1/1:0,175:175:99:7308,527,0	./.	./.	./.	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	1/1:0,200:200:99:8352,602,0	1/1:0,155:155:99:6473,467,0	1/1:0,168:168:99:7016,506,0	1/1:0,172:172:99:7183,518,0	1/1:0,172:172:99:7183,518,0	0/0:155,0:155:99:0,467,6473	1/1:0,160:160:99:6682,482,0	1/1:0,170:170:99:7099,512,0	0/0:181,0:181:99:0,545,7559	1/1:0,172:172:99:7183,518,0	./.	./.
gi|293339394|gb|GU595196.1|	17131	.	C	T	210.79	.	AC=1;AF=0.031;AN=32;BaseQRankSum=0.285;DP=2561;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.9999;InbreedingCoeff=-0.0323;MQ=254.00;MQ0=0;MQRankSum=-0.282;QD=7.81;ReadPosRankSum=-4.616;SB=-124.92	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:131,0:131:99:0,394,5471	0/0:133,0:133:99:0,400,5554	0/0:155,0:155:99:0,467,6473	./.	./.	./.	0/0:160,0:160:99:0,482,6682	0/0:161,0:161:99:0,485,6723	0/0:183,0:183:99:0,551,7642	0/0:205,0:205:99:0,617,8561	0/0:204,0:204:99:0,614,8519	0/0:162,0:162:99:0,488,6765	0/1:19,8:27:99:253,0,712	0/0:163,0:163:99:0,491,6807	0/0:153,0:153:99:0,461,6389	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:200,0:200:99:0,602,8352	./.	./.
gi|293339394|gb|GU595196.1|	17132	.	G	C	775.26	.	AC=2;AF=0.063;AN=32;BaseQRankSum=1.500;DP=2560;Dels=0.00;FS=1.820;HRun=2;HaplotypeScore=0.8124;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.125;QD=38.76;ReadPosRankSum=-6.793;SB=-375.73	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:131,0:131:99:0,394,5471	0/0:133,0:133:99:0,400,5554	0/0:153,0:153:99:0,461,6389	./.	./.	./.	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:183,0:183:99:0,551,7642	0/0:206,0:206:99:0,620,8603	0/0:203,0:203:99:0,611,8477	0/0:163,0:163:99:0,491,6807	1/1:0,20:20:60.20:835,60,0	0/0:161,0:161:99:0,485,6723	0/0:154,0:154:99:0,464,6431	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:201,0:201:99:0,605,8394	./.	./.
gi|293339394|gb|GU595196.1|	17980	.	C	T	753.98	.	AC=4;AF=0.125;AN=32;BaseQRankSum=-1.036;DP=2370;Dels=0.00;FS=57.499;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9988;MQ=254.00;MQ0=0;MQRankSum=-0.185;QD=37.70;ReadPosRankSum=-6.222;SB=-0.02	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:189,0:189:99:0,569,7893	1/1:0,8:8:24.08:334,24,0	1/1:0,12:12:36.12:501,36,0	./.	./.	./.	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:176,0:176:99:0,530,7350	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:191,0:191:99:0,575,7976	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	0/0:148,0:148:99:0,445,6181	0/0:153,0:153:99:0,461,6389	0/0:143,0:143:99:0,430,5972	./.	./.
gi|293339394|gb|GU595196.1|	17981	.	G	C	587.25	.	AC=4;AF=0.125;AN=32;BaseQRankSum=0.030;DP=2371;Dels=0.00;FS=45.297;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9978;MQ=254.00;MQ0=0;MQRankSum=2.069;QD=36.70;ReadPosRankSum=-5.873;SB=-0.02	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:190,0:190:99:0,572,7934	1/1:0,8:8:24.08:334,24,0	1/1:0,8:8:24.08:334,24,0	./.	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:189,0:189:99:0,569,7893	0/0:186,0:186:99:0,560,7767	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:145,0:145:99:0,436,6055	0/0:157,0:157:99:0,473,6556	0/0:143,0:143:99:0,430,5972	./.	./.
gi|293339394|gb|GU595196.1|	20835	.	A	T	139.51	.	AC=1;AF=0.036;AN=28;BaseQRankSum=-0.244;DP=2175;Dels=0.00;FS=3.430;HRun=6;HaplotypeScore=0.2857;InbreedingCoeff=-0.0370;MQ=254.00;MQ0=0;MQRankSum=-0.754;QD=3.77;ReadPosRankSum=-4.276;SB=-32.37	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:154,0:154:99:0,464,6431	./.	./.	./.	./.	./.	0/0:197,0:197:99:0,593,8227	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:139,0:139:99:0,418,5805	0/1:30,7:37:99:181,0,1141	0/0:160,0:160:99:0,482,6682	0/0:147,0:147:99:0,442,6139	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:155,0:155:99:0,467,6473	./.	./.
gi|293339394|gb|GU595196.1|	20902	.	A	C	267.42	.	AC=1;AF=0.036;AN=28;BaseQRankSum=-0.305;DP=2252;Dels=0.00;FS=2.612;HRun=2;HaplotypeScore=1.0713;InbreedingCoeff=-0.0370;MQ=254.00;MQ0=0;MQRankSum=0.557;QD=5.35;ReadPosRankSum=-5.052;SB=-91.81	GT:AD:DP:GQ:PL	0/0:142,0:142:99:0,427,5930	0/0:182,0:182:99:0,548,7600	./.	./.	./.	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:148,0:148:99:0,445,6181	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:197,0:197:99:0,593,8227	0/0:191,0:191:99:0,575,7976	0/1:39,11:50:99:309,0,1478	0/0:168,0:168:99:0,506,7016	0/0:184,0:184:99:0,554,7684	0/0:165,0:165:99:0,497,6890	./.	./.
gi|293339394|gb|GU595196.1|	20908	.	A	T	482.24	.	AC=1;AF=0.036;AN=28;BaseQRankSum=-0.514;DP=2277;Dels=0.00;FS=0.000;HRun=3;HaplotypeScore=1.2855;InbreedingCoeff=-0.0370;MQ=254.00;MQ0=0;MQRankSum=-1.345;QD=10.05;ReadPosRankSum=-6.054;SB=-252.83	GT:AD:DP:GQ:PL	0/0:145,0:145:99:0,436,6055	0/0:180,0:180:99:0,542,7517	./.	./.	./.	./.	./.	0/0:169,0:169:99:0,509,7057	0/0:156,0:156:99:0,470,6515	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:200,0:200:99:0,602,8352	0/0:197,0:197:99:0,593,8227	0/1:32,16:48:99:524,0,1192	0/0:165,0:165:99:0,497,6890	0/0:186,0:186:99:0,560,7767	0/0:165,0:165:99:0,497,6890	./.	./.
gi|293339394|gb|GU595196.1|	22596	.	T	A	153.92	.	AC=2;AF=0.067;AN=30;BaseQRankSum=0.912;DP=2375;Dels=0.00;FS=12.059;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=0.9835;MQ=254.00;MQ0=0;MQRankSum=-1.380;QD=30.78;ReadPosRankSum=-3.314;SB=-0.02	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	./.	./.	./.	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:192,0:192:99:0,578,8018	0/0:194,0:194:99:0,584,8102	0/0:182,0:182:99:0,548,7600	0/0:164,0:164:99:0,494,6849	0/0:155,0:155:99:0,467,6473	0/0:168,0:168:99:0,506,7016	0/0:153,0:153:99:0,461,6389	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:179,0:179:99:0,539,7475	1/1:0,5:5:15.05:209,15,0	./.
gi|293339394|gb|GU595196.1|	23483	.	A	G	3674.93	.	AC=2;AF=0.067;AN=30;BaseQRankSum=-1.757;DP=2440;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.949;QD=41.76;ReadPosRankSum=-0.019;SB=-1837.47	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:156,0:156:99:0,470,6515	./.	./.	./.	./.	./.	0/0:175,0:175:99:0,527,7308	0/0:143,0:143:99:0,430,5972	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:179,0:179:99:0,539,7475	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:179,0:179:99:0,539,7475	1/1:0,88:88:99:3675,265,0	./.
gi|293339394|gb|GU595196.1|	25008	.	A	G	3507.89	.	AC=2;AF=0.067;AN=30;BaseQRankSum=-1.847;DP=2443;Dels=0.00;FS=2.962;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.177;QD=41.76;ReadPosRankSum=-0.353;SB=-1628.67	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	./.	./.	./.	./.	./.	0/0:171,0:171:99:0,515,7141	0/0:156,0:156:99:0,470,6515	0/0:155,0:155:99:0,467,6473	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	1/1:0,84:84:99:3508,253,0	./.
gi|293339394|gb|GU595196.1|	25646	.	T	G	50.38	.	AC=5;AF=0.139;AN=36;BaseQRankSum=-0.107;DP=1095;Dels=0.00;FS=62.597;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.4774;MQ=254.00;MQ0=0;MQRankSum=2.140;QD=12.59;ReadPosRankSum=-1.213;SB=16.33	GT:AD:DP:GQ:PL	0/0:74,0:74:99:0,223,3090	0/0:100,0:100:99:0,301,4176	./.	0/0:1,0:1:3.01:0,3,42	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	0/1:1,1:2:35.74:36,0,36	0/0:91,0:91:99:0,274,3800	0/0:93,0:93:99:0,280,3884	0/0:73,0:73:99:0,220,3049	0/0:81,0:81:99:0,244,3383	0/0:90,0:90:99:0,271,3758	0/0:87,0:87:99:0,262,3633	0/0:75,0:75:99:0,226,3132	0/0:73,0:73:99:0,220,3049	0/0:86,0:86:99:0,259,3591	0/0:84,0:84:99:0,253,3508	0/0:81,0:81:99:0,244,3383	0/0:2,0:2:6.02:0,6,84	./.
gi|293339394|gb|GU595196.1|	26152	.	G	A	7877.61	.	AC=1;AF=0.025;AN=40;BaseQRankSum=-0.991;DP=3648;DS;Dels=0.00;FS=52.290;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=-0.0256;MQ=254.00;MQ0=0;MQRankSum=0.503;QD=34.70;ReadPosRankSum=-0.806;SB=-2176.54	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:157,0:157:99:0,473,6556	0/1:22,205:227:99:7878,0,235	0/0:237,0:237:99:0,713,9897	0/0:134,0:134:99:0,403,5596	0/0:154,0:154:99:0,464,6431	0/0:205,0:205:99:0,617,8561	0/0:247,0:247:99:0,743,10315	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	0/0:172,0:172:99:0,518,7183	0/0:165,0:165:99:0,497,6890	0/0:189,0:189:99:0,569,7893	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:185,0:185:99:0,557,7726	0/0:185,0:185:99:0,557,7726	0/0:154,0:154:99:0,464,6431	0/0:160,0:160:99:0,482,6682	0/0:250,0:250:99:0,753,10440	./.
gi|293339394|gb|GU595196.1|	26153	.	G	A	7996.88	.	AC=1;AF=0.025;AN=40;BaseQRankSum=-0.595;DP=3638;DS;Dels=0.00;FS=53.388;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=-0.0256;MQ=254.00;MQ0=0;MQRankSum=0.902;QD=34.92;ReadPosRankSum=-1.669;SB=-2179.55	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:157,0:157:99:0,473,6556	0/1:21,208:229:99:7997,0,188	0/0:240,0:240:99:0,722,10022	0/0:134,0:134:99:0,403,5596	0/0:152,0:152:99:0,458,6348	0/0:203,0:203:99:0,611,8477	0/0:248,0:248:99:0,746,10357	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:182,0:182:99:0,548,7600	0/0:183,0:183:99:0,551,7642	0/0:155,0:155:99:0,467,6473	0/0:159,0:159:99:0,479,6640	0/0:250,0:250:99:0,753,10440	./.
gi|293339394|gb|GU595196.1|	26359	.	C	T	75.89	.	AC=1;AF=0.025;AN=40;BaseQRankSum=0.483;DP=2498;Dels=0.00;FS=12.220;HRun=0;HaplotypeScore=2.3497;InbreedingCoeff=-0.0259;MQ=254.00;MQ0=0;MQRankSum=0.338;QD=4.74;ReadPosRankSum=-2.641;SB=-9.75	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:9,0:9:27.09:0,27,376	0/0:18,0:18:54.18:0,54,752	0/0:7,0:7:21.07:0,21,292	0/0:13,0:13:39.13:0,39,543	0/1:12,4:16:99:119,0,453	0/0:184,0:184:99:0,554,7684	0/0:184,0:184:99:0,554,7684	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	0/0:16,0:16:48.16:0,48,668	./.
gi|293339394|gb|GU595196.1|	26360	.	A	C,G	1430.22	.	AC=4,7;AF=0.100,0.175;AN=40;BaseQRankSum=1.935;DP=2471;Dels=0.00;FS=88.497;HaplotypeScore=1.4998;InbreedingCoeff=0.9930;MQ=254.00;MQ0=0;MQRankSum=-0.332;QD=23.84;ReadPosRankSum=-10.264;SB=177.77	GT:AD:DP:GQ:PL	0/0:178,0,0:178:99:0,536,7433,536,7433,7433	0/0:169,0,0:169:99:0,509,7057,509,7057,7057	1/2:0,4,2:6:65.46:233,78,65,155,0,149	1/2:0,3,1:10:29.72:155,39,30,116,0,113	2/2:0,0,5:5:15.05:209,209,209,15,15,0	2/2:0,0,11:11:33.11:459,459,459,33,33,0	0/1:7,5,4:16:38.75:173,0,256,39,116,298	0/0:186,0,0:186:99:0,560,7767,560,7767,7767	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:169,0,0:169:99:0,509,7057,509,7057,7057	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:174,0,0:174:99:0,524,7266,524,7266,7266	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:164,0,0:164:99:0,494,6849,494,6849,6849	1/2:0,4,6:12:99:388,233,220,155,0,137	./.
gi|293339394|gb|GU595196.1|	26361	.	G	A,C	197.96	.	AC=2,3;AF=0.050,0.075;AN=40;BaseQRankSum=0.782;DP=2456;Dels=0.00;FS=18.120;HaplotypeScore=1.5998;InbreedingCoeff=0.0770;MQ=254.00;MQ0=0;MQRankSum=-1.148;QD=10.42;ReadPosRankSum=-5.799;SB=0.28	GT:AD:DP:GQ:PL	0/0:179,0,0:179:99:0,539,7475,539,7475,7475	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	1/2:0,2,1:3:32.73:116,39,33,78,0,74	1/2:1,2,3:6:38.75:152,78,110,39,0,68	0/0:3,0,0:3:9.03:0,9,125,9,125,125	0/0:6,0,0:6:18.06:0,18,251,18,251,251	0/0:11,0,0:11:33.11:0,33,459,33,459,459	0/0:184,2,0:186:99:0,476,7600,554,7606,7684	0/0:176,0,0:176:99:0,530,7350,530,7350,7350	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:174,0,0:174:99:0,524,7266,524,7266,7266	0/0:178,0,0:178:99:0,536,7433,536,7433,7433	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:164,0,0:164:99:0,494,6849,494,6849,6849	0/0:174,0,0:174:99:0,524,7266,524,7266,7266	0/0:176,0,0:176:99:0,530,7350,530,7350,7350	0/0:164,0,0:164:99:0,494,6849,494,6849,6849	0/2:7,0,2:10:56.43:56,78,349,0,271,265	./.
gi|293339394|gb|GU595196.1|	26362	.	G	A,T	321.44	.	AC=3,6;AF=0.079,0.158;AN=38;BaseQRankSum=1.366;DP=2430;Dels=0.00;FS=30.382;HaplotypeScore=0.4210;InbreedingCoeff=0.9245;MQ=254.00;MQ0=0;MQRankSum=-0.419;QD=14.61;ReadPosRankSum=-5.906;SB=-4.74	GT:AD:DP:GQ:PL	0/0:181,0,0:181:99:0,545,7559,545,7559,7559	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	./.	1/1:0,1,0:1:3.01:42,3,0,42,3,42	2/2:0,0,1:1:3.01:42,42,42,3,3,0	2/2:0,0,4:4:12.04:167,167,167,12,12,0	0/1:10,2,0:12:47.40:47,0,381,78,388,465	0/0:183,0,1:184:99:0,551,7642,512,7603,7600	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:169,0,0:169:99:0,509,7057,509,7057,7057	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:176,0,0:176:99:0,530,7350,530,7350,7350	0/0:180,0,0:180:99:0,542,7517,542,7517,7517	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:160,0,0:160:99:0,482,6682,482,6682,6682	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:164,0,0:164:99:0,494,6849,494,6849,6849	2/2:0,0,4:4:12.04:167,167,167,12,12,0	./.
gi|293339394|gb|GU595196.1|	27549	.	G	T	221.92	.	AC=4;AF=0.118;AN=34;BaseQRankSum=-0.868;DP=2622;Dels=0.00;FS=21.114;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8930;MQ=254.00;MQ0=0;MQRankSum=-0.471;QD=31.70;ReadPosRankSum=-4.655;SB=-0.02	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:184,0:184:99:0,554,7684	1/1:0,1:1:3.01:42,3,0	1/1:0,6:6:18.06:251,18,0	./.	./.	0/0:177,1:178:99:0,494,7350	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:155,0:155:99:0,467,6473	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:191,0:191:99:0,575,7976	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:190,0:190:99:0,572,7934	0/0:190,0:190:99:0,572,7934	0/0:175,0:175:99:0,527,7308	./.	./.
gi|293339394|gb|GU595196.1|	27574	.	A	C	3132.88	.	AC=4;AF=0.118;AN=34;BaseQRankSum=-1.006;DP=2688;Dels=0.00;FS=216.035;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.299;QD=40.69;ReadPosRankSum=1.583;SB=-0.02	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:172,0:172:99:0,518,7183	1/1:0,30:30:90.30:1253,90,0	1/1:0,47:47:99:1963,141,0	./.	./.	0/0:216,0:216:99:0,650,9020	0/0:195,0:195:99:0,587,8143	0/0:159,0:159:99:0,479,6640	0/0:148,0:148:99:0,445,6181	0/0:148,0:148:99:0,445,6181	0/0:178,0:178:99:0,536,7433	0/0:165,0:165:99:0,497,6890	0/0:194,0:194:99:0,584,8102	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:189,0:189:99:0,569,7893	0/0:174,0:174:99:0,524,7266	0/0:189,0:189:99:0,569,7893	./.	./.
gi|293339394|gb|GU595196.1|	27586	.	T	C	853.61	.	AC=5;AF=0.132;AN=38;BaseQRankSum=-0.215;DP=2786;Dels=0.00;FS=74.337;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.7655;MQ=254.00;MQ0=0;MQRankSum=-0.957;QD=9.18;ReadPosRankSum=-7.043;SB=-0.02	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:53,0:53:99:0,160,2213	0/1:65,10:75:99:192,0,2489	./.	./.	0/0:249,0:249:99:0,749,10398	0/0:180,0:180:99:0,542,7517	0/0:159,0:159:99:0,479,6640	0/0:147,0:147:99:0,442,6139	0/0:153,0:153:99:0,461,6389	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:184,0:184:99:0,554,7684	1/1:0,6:6:18.06:251,18,0	1/1:0,12:12:36.12:501,36,0
gi|293339394|gb|GU595196.1|	27592	.	C	T	1973.72	.	AC=5;AF=0.132;AN=38;BaseQRankSum=-0.737;DP=2800;Dels=0.00;FS=149.575;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.7696;MQ=254.00;MQ0=0;MQRankSum=0.298;QD=15.79;ReadPosRankSum=-6.786;SB=-0.02	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	0/0:56,0:56:99:0,169,2339	0/1:69,22:91:99:645,0,2608	./.	./.	0/0:245,0:245:99:0,737,10231	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:154,0:154:99:0,464,6431	0/0:158,0:158:99:0,476,6598	0/0:167,0:167:99:0,503,6974	0/0:165,0:165:99:0,497,6890	0/0:184,0:184:99:0,554,7684	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:179,0:179:99:0,539,7475	1/1:0,12:12:36.12:501,36,0	1/1:0,22:22:66.22:919,66,0
gi|293339394|gb|GU595196.1|	27658	.	G	A	3361.51	.	AC=3;AF=0.079;AN=38;BaseQRankSum=0.112;DP=2843;DS;Dels=0.00;FS=214.240;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.6381;MQ=254.00;MQ0=0;MQRankSum=0.416;QD=19.89;ReadPosRankSum=-0.949;SB=-0.02	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:170,0:170:99:0,512,7099	1/1:0,51:51:99:2130,154,0	0/1:80,38:118:99:1232,0,2986	./.	./.	0/0:248,0:248:99:0,746,10357	0/0:161,0:161:99:0,485,6723	0/0:155,0:155:99:0,467,6473	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:205,0:205:99:0,617,8561	0/0:163,0:163:99:0,491,6807	0/0:137,0:137:99:0,412,5721	0/0:146,0:146:99:0,439,6097	0/0:152,0:152:99:0,458,6348	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:155,0:155:99:0,467,6473	0/0:39,0:39:99:0,117,1629	0/0:92,0:92:99:0,277,3842
gi|293339394|gb|GU595196.1|	27682	.	G	A	5679.42	.	AC=4;AF=0.105;AN=38;BaseQRankSum=-0.602;DP=2879;DS;Dels=0.00;FS=356.630;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.280;QD=41.76;ReadPosRankSum=-2.392;SB=-0.02	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	0/0:34,0:34:99:0,102,1420	0/0:114,0:114:99:0,343,4761	./.	./.	0/0:239,0:239:99:0,719,9981	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:190,0:190:99:0,572,7934	0/0:168,0:168:99:0,506,7016	0/0:148,0:148:99:0,445,6181	0/0:164,0:164:99:0,494,6849	0/0:163,0:163:99:0,491,6807	0/0:183,0:183:99:0,551,7642	0/0:186,0:186:99:0,560,7767	0/0:150,0:150:99:0,452,6264	1/1:0,46:46:99:1921,138,0	1/1:0,90:90:99:3758,271,0
gi|293339394|gb|GU595196.1|	27874	.	C	T	6211.35	.	AC=1;AF=0.026;AN=38;BaseQRankSum=-0.251;DP=3116;DS;Dels=0.00;FS=1.632;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=-0.0270;MQ=254.00;MQ0=0;MQRankSum=-0.430;QD=33.76;ReadPosRankSum=2.144;SB=-3013.29	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:25,0:25:75.25:0,75,1044	0/1:22,162:184:99:6211,0,365	./.	./.	0/0:249,0:249:99:0,749,10398	0/0:170,0:170:99:0,512,7099	0/0:188,0:188:99:0,566,7851	0/0:155,0:155:99:0,467,6473	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	0/0:199,0:199:99:0,599,8310	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:81,0:81:99:0,244,3383	0/0:172,0:172:99:0,518,7183
gi|293339394|gb|GU595196.1|	28004	.	G	T	7642.16	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.358;DP=3034;DS;Dels=0.00;FS=4.436;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.214;QD=41.76;ReadPosRankSum=0.590;SB=-3674.93	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:154,0:154:99:0,464,6431	./.	1/1:0,183:183:99:7642,551,0	./.	./.	0/0:238,0:238:99:0,716,9939	0/0:164,0:164:99:0,494,6849	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:157,0:157:99:0,473,6556	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	0/0:149,0:149:99:0,448,6222	0/0:181,0:181:99:0,545,7559	0/0:184,0:184:99:0,554,7684	0/0:167,0:167:99:0,503,6974	0/0:81,0:81:99:0,244,3383	0/0:218,0:218:99:0,656,9104
gi|293339394|gb|GU595196.1|	28017	.	A	G	19836.18	.	AC=6;AF=0.167;AN=36;BaseQRankSum=-0.495;DP=3010;DS;Dels=0.00;FS=0.750;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.354;QD=41.76;ReadPosRankSum=-2.392;SB=-9354.33	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:140,0:140:99:0,421,5846	./.	1/1:0,181:181:99:7559,545,0	./.	./.	0/0:244,0:244:99:0,734,10190	0/0:170,0:170:99:0,512,7099	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:147,0:147:99:0,442,6139	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:186,0:186:99:0,560,7767	0/0:168,0:168:99:0,506,7016	1/1:0,84:84:99:3508,253,0	1/1:0,210:210:99:8770,632,0
gi|293339394|gb|GU595196.1|	28068	.	C	T	18583.37	.	AC=6;AF=0.167;AN=36;BaseQRankSum=0.059;DP=3013;DS;Dels=0.00;FS=0.370;HRun=3;HaplotypeScore=0.4444;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.023;QD=41.76;ReadPosRankSum=-0.258;SB=-9020.25	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	./.	1/1:0,181:181:99:7559,545,0	./.	./.	0/0:176,0:176:99:0,530,7350	0/0:184,0:184:99:0,554,7684	0/0:185,0:185:99:0,557,7726	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:192,0:192:99:0,578,8018	0/0:157,0:157:99:0,473,6556	0/0:182,0:182:99:0,548,7600	0/0:153,0:153:99:0,461,6389	0/0:162,0:162:99:0,488,6765	0/0:152,0:152:99:0,458,6348	0/0:186,0:186:99:0,560,7767	0/0:166,0:166:99:0,500,6932	1/1:0,85:85:99:3550,256,0	1/1:0,179:179:99:7475,539,0
gi|293339394|gb|GU595196.1|	28278	.	C	T	18833.93	.	AC=6;AF=0.167;AN=36;BaseQRankSum=1.402;DP=2945;Dels=0.00;FS=4.153;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.794;QD=41.76;ReadPosRankSum=-0.249;SB=-8853.21	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	./.	1/1:0,166:166:99:6932,500,0	./.	./.	0/0:183,0:183:99:0,551,7642	0/0:178,0:178:99:0,536,7433	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:187,0:187:99:0,563,7809	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:141,0:141:99:0,424,5888	0/0:143,0:143:99:0,430,5972	0/0:150,0:150:99:0,452,6264	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	1/1:0,95:95:99:3967,286,0	1/1:0,190:190:99:7934,572,0
gi|293339394|gb|GU595196.1|	28446	.	T	G	14657.90	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.827;DP=3012;Dels=0.00;FS=4.756;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.335;QD=41.76;ReadPosRankSum=0.330;SB=-7141.04	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	./.	1/1:0,158:158:99:6598,476,0	./.	./.	1/1:0,193:193:99:8060,581,0	0/0:151,0:151:99:0,455,6306	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	0/0:154,0:154:99:0,464,6431	0/0:167,0:167:99:0,503,6974	0/0:198,0:198:99:0,596,8269	0/0:179,0:179:99:0,539,7475	0/0:153,0:153:99:0,461,6389	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:85,0:85:99:0,256,3550	0/0:202,0:202:99:0,608,8436
gi|293339394|gb|GU595196.1|	28935	.	T	C	152.85	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.087;DP=2678;Dels=0.00;FS=11.877;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9837;MQ=254.00;MQ0=0;MQRankSum=0.658;QD=30.57;ReadPosRankSum=-3.746;SB=-0.02	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:168,0:168:99:0,506,7016	./.	0/0:86,0:86:99:0,259,3591	./.	./.	0/0:161,0:161:99:0,485,6723	0/0:152,0:152:99:0,458,6348	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:184,0:184:99:0,554,7684	0/0:151,0:151:99:0,455,6306	0/0:181,0:181:99:0,545,7559	0/0:190,0:190:99:0,572,7934	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:45,0:45:99:0,135,1879	1/1:0,5:5:15.05:209,15,0
gi|293339394|gb|GU595196.1|	29061	.	G	A	74.53	.	AC=2;AF=0.059;AN=34;BaseQRankSum=1.423;DP=2371;Dels=0.00;FS=5.930;HRun=0;HaplotypeScore=0.1176;InbreedingCoeff=0.8413;MQ=254.00;MQ0=0;MQRankSum=-0.392;QD=24.84;ReadPosRankSum=-2.876;SB=-0.02	GT:AD:DP:GQ:PL	0/0:139,0:139:99:0,418,5805	0/0:174,0:174:99:0,524,7266	./.	1/1:0,3:3:9.03:125,9,0	./.	./.	0/0:153,0:153:99:0,461,6389	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:146,0:146:99:0,439,6097	0/0:157,0:157:99:0,473,6556	0/0:158,0:158:99:0,476,6598	0/0:155,0:155:99:0,467,6473	0/0:169,0:169:99:0,509,7057	0/0:169,0:169:99:0,509,7057	0/0:149,0:149:99:0,448,6222	0/0:147,0:147:99:0,442,6139	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:2,0:2:6.02:0,6,84	./.
gi|293339394|gb|GU595196.1|	29062	.	T	A	62.59	.	AC=4;AF=0.118;AN=34;BaseQRankSum=0.382;DP=2337;Dels=0.00;FS=5.885;HRun=0;HaplotypeScore=0.0588;InbreedingCoeff=0.8287;MQ=254.00;MQ0=0;MQRankSum=-1.254;QD=20.86;ReadPosRankSum=-2.743;SB=-0.02	GT:AD:DP:GQ:PL	0/0:137,0:137:99:0,412,5721	0/0:175,0:175:99:0,527,7308	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	0/0:150,0:150:99:0,452,6264	0/0:157,0:157:99:0,473,6556	0/0:160,0:160:99:0,482,6682	0/0:144,0:144:99:0,433,6013	0/0:151,0:151:99:0,455,6306	0/0:159,0:159:99:0,479,6640	0/0:152,0:152:99:0,458,6348	0/0:165,0:165:99:0,497,6890	0/0:165,0:165:99:0,497,6890	0/0:147,0:147:99:0,442,6139	0/0:148,0:148:99:0,445,6181	0/0:155,0:155:99:0,467,6473	0/0:169,0:169:99:0,509,7057	1/1:0,2:2:6.02:84,6,0	./.
gi|293339394|gb|GU595196.1|	29464	.	G	A	314.99	.	AC=1;AF=0.028;AN=36;BaseQRankSum=-1.486;DP=1741;Dels=0.00;FS=12.051;HRun=2;HaplotypeScore=0.3333;InbreedingCoeff=-0.0384;MQ=254.00;MQ0=0;MQRankSum=0.414;QD=15.75;ReadPosRankSum=-4.816;SB=-177.05	GT:AD:DP:GQ:PL	0/0:112,0:112:99:0,337,4677	0/0:124,0:124:99:0,373,5178	0/0:78,0:78:99:0,235,3257	0/0:110,0:110:99:0,331,4594	./.	./.	0/0:119,0:119:99:0,358,4969	0/0:101,0:101:99:0,304,4218	0/0:115,0:115:99:0,346,4802	0/1:10,10:20:99:357,0,357	0/0:106,0:106:99:0,319,4427	0/0:107,0:107:99:0,322,4468	0/0:103,0:103:99:0,310,4301	0/0:112,0:112:99:0,337,4677	0/0:100,0:100:99:0,301,4176	0/0:115,0:115:99:0,346,4802	0/0:105,0:105:99:0,316,4385	0/0:112,0:112:99:0,337,4677	0/0:101,0:101:99:0,304,4218	0/0:1,0:1:3.01:0,3,42	./.
gi|293339394|gb|GU595196.1|	29465	.	T	G	443.28	.	AC=1;AF=0.028;AN=36;BaseQRankSum=1.026;DP=1769;Dels=0.00;FS=10.055;HRun=1;HaplotypeScore=0.3333;InbreedingCoeff=-0.0384;MQ=254.00;MQ0=0;MQRankSum=-0.791;QD=23.33;ReadPosRankSum=-5.186;SB=-250.45	GT:AD:DP:GQ:PL	0/0:116,0:116:99:0,349,4844	0/0:124,0:124:99:0,373,5178	0/0:78,0:78:99:0,235,3257	0/0:109,0:109:99:0,328,4552	./.	./.	0/0:123,0:123:99:0,370,5137	0/0:104,0:104:99:0,313,4343	0/0:117,0:117:99:0,352,4886	0/1:6,13:19:99:486,0,193	0/0:107,0:107:99:0,322,4468	0/0:109,0:109:99:0,328,4552	0/0:107,0:107:99:0,322,4468	0/0:111,0:111:99:0,334,4635	0/0:104,0:104:99:0,313,4343	0/0:116,0:116:99:0,349,4844	0/0:105,0:105:99:0,316,4385	0/0:115,0:115:99:0,346,4802	0/0:104,0:104:99:0,313,4343	0/0:1,0:1:3.01:0,3,42	./.
gi|293339394|gb|GU595196.1|	29467	.	T	A	85.12	.	AC=1;AF=0.028;AN=36;BaseQRankSum=-0.638;DP=1817;Dels=0.00;FS=4.799;HRun=1;HaplotypeScore=0.3333;InbreedingCoeff=-0.0384;MQ=254.00;MQ0=0;MQRankSum=-0.208;QD=3.15;ReadPosRankSum=-3.656;SB=0.11	GT:AD:DP:GQ:PL	0/0:116,0:116:99:0,349,4844	0/0:129,0:129:99:0,388,5387	0/0:81,0:81:99:0,244,3383	0/0:111,0:111:99:0,334,4635	./.	./.	0/0:126,0:126:99:0,379,5262	0/0:106,0:106:99:0,319,4427	0/0:122,0:122:99:0,367,5095	0/1:22,5:27:99:128,0,837	0/0:112,0:112:99:0,337,4677	0/0:109,0:109:99:0,328,4552	0/0:118,0:118:99:0,355,4928	0/0:109,0:109:99:0,328,4552	0/0:109,0:109:99:0,328,4552	0/0:115,0:115:99:0,346,4802	0/0:109,0:109:99:0,328,4552	0/0:111,0:111:99:0,334,4635	0/0:106,0:106:99:0,319,4427	0/0:1,0:1:3.01:0,3,42	./.
gi|293339394|gb|GU595196.1|	31612	.	G	C	524.18	.	AC=2;AF=0.059;AN=34;BaseQRankSum=0.215;DP=2711;Dels=0.00;FS=7.366;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.814;QD=37.44;ReadPosRankSum=-6.113;SB=-166.81	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:194,0:194:99:0,584,8102	0/0:127,0:127:99:0,382,5304	0/0:171,0:171:99:0,515,7141	./.	./.	0/0:162,0:162:99:0,488,6765	0/0:158,0:158:99:0,476,6598	0/0:184,0:184:99:0,554,7684	0/0:193,0:193:99:0,581,8060	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:154,0:154:99:0,464,6431	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	1/1:0,14:14:42.14:585,42,0	./.	./.
gi|293339394|gb|GU595196.1|	31613	.	C	G	153.18	.	AC=2;AF=0.059;AN=34;BaseQRankSum=-0.199;DP=2721;Dels=0.00;FS=4.238;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9837;MQ=254.00;MQ0=0;MQRankSum=-1.312;QD=30.64;ReadPosRankSum=-3.767;SB=-39.54	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:198,0:198:99:0,596,8269	0/0:127,0:127:99:0,382,5304	0/0:172,0:172:99:0,518,7183	./.	./.	0/0:162,0:162:99:0,488,6765	0/0:159,0:159:99:0,479,6640	0/0:186,0:186:99:0,560,7767	0/0:191,0:191:99:0,575,7976	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:153,0:153:99:0,461,6389	0/0:179,0:179:99:0,539,7475	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	1/1:0,5:5:15.05:209,15,0	./.	./.
gi|293339394|gb|GU595196.1|	31616	.	G	C	74.46	.	AC=2;AF=0.059;AN=34;BaseQRankSum=0.295;DP=2729;Dels=0.00;FS=2.129;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9377;MQ=254.00;MQ0=0;MQRankSum=0.302;QD=24.82;ReadPosRankSum=-2.810;SB=-39.01	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:198,0:198:99:0,596,8269	0/0:126,0:126:99:0,379,5262	0/0:165,0:165:99:0,497,6890	./.	./.	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:180,0:180:99:0,542,7517	0/0:192,0:192:99:0,578,8018	0/0:175,0:175:99:0,527,7308	0/0:160,0:160:99:0,482,6682	0/0:175,0:175:99:0,527,7308	0/0:150,0:150:99:0,452,6264	0/0:187,0:187:99:0,563,7809	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	1/1:0,3:3:9.03:125,9,0	./.	./.
gi|293339394|gb|GU595196.1|	34450	.	A	G	35.21	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.602;DP=2630;Dels=0.00;FS=3.012;HRun=1;HaplotypeScore=0.8332;InbreedingCoeff=0.8828;MQ=254.00;MQ0=0;MQRankSum=0.959;QD=17.60;ReadPosRankSum=-2.391;SB=0.01	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:163,0:163:99:0,491,6807	0/0:11,0:11:33.11:0,33,459	0/0:21,0:21:63.21:0,63,877	./.	1/1:0,2:2:6.02:84,6,0	0/0:189,0:189:99:0,569,7893	0/0:166,0:166:99:0,500,6932	0/0:187,0:187:99:0,563,7809	0/0:189,0:189:99:0,569,7893	0/0:168,0:168:99:0,506,7016	0/0:136,0:136:99:0,409,5679	0/0:189,0:189:99:0,569,7893	0/0:176,0:176:99:0,530,7350	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:183,0:183:99:0,551,7642	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	./.	./.
gi|293339394|gb|GU595196.1|	34451	.	G	T	74.19	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.834;DP=2647;Dels=0.00;FS=6.025;HRun=0;HaplotypeScore=0.8888;InbreedingCoeff=0.9369;MQ=254.00;MQ0=0;MQRankSum=0.545;QD=24.73;ReadPosRankSum=-2.719;SB=-0.01	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:166,0:166:99:0,500,6932	0/0:9,0:9:27.09:0,27,376	0/0:20,0:20:60.20:0,60,835	./.	1/1:0,3:3:9.03:125,9,0	0/0:188,0:188:99:0,566,7851	0/0:165,0:165:99:0,497,6890	0/0:193,0:193:99:0,581,8060	0/0:190,0:190:99:0,572,7934	0/0:167,0:167:99:0,503,6974	0/0:135,0:135:99:0,406,5638	0/0:189,0:189:99:0,569,7893	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:182,0:182:99:0,548,7600	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	./.	./.
gi|293339394|gb|GU595196.1|	34452	.	C	T	751.51	.	AC=3;AF=0.079;AN=38;BaseQRankSum=-0.793;DP=2653;Dels=0.00;FS=63.402;HRun=0;HaplotypeScore=0.9999;InbreedingCoeff=-0.0890;MQ=254.00;MQ0=0;MQRankSum=1.145;QD=22.10;ReadPosRankSum=-6.967;SB=-25.78	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:163,0:163:99:0,491,6807	0/1:4,9:13:99:337,0,128	0/1:7,12:19:99:444,0,235	./.	0/0:3,0:3:9.03:0,9,125	0/0:188,0:188:99:0,566,7851	0/0:164,0:164:99:0,494,6849	0/0:192,0:192:99:0,578,8018	0/0:193,0:193:99:0,581,8060	0/0:169,0:169:99:0,509,7057	0/0:137,0:137:99:0,412,5721	0/0:191,0:191:99:0,575,7976	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:167,0:167:99:0,503,6974	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/1:1,1:2:35.74:36,0,36	./.
gi|293339394|gb|GU595196.1|	34453	.	C	T	809.52	.	AC=2;AF=0.050;AN=40;BaseQRankSum=1.034;DP=2640;Dels=0.00;FS=66.273;HRun=0;HaplotypeScore=0.9499;InbreedingCoeff=-0.0731;MQ=254.00;MQ0=0;MQRankSum=-0.393;QD=25.30;ReadPosRankSum=-6.566;SB=19.50	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:159,0:159:99:0,479,6640	0/1:4,11:15:99:414,0,122	0/1:5,12:17:99:450,0,158	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:12.04:0,12,167	0/0:189,0:189:99:0,569,7893	0/0:162,0:162:99:0,488,6765	0/0:195,0:195:99:0,587,8143	0/0:186,0:186:99:0,560,7767	0/0:168,0:168:99:0,506,7016	0/0:136,0:136:99:0,409,5679	0/0:188,0:188:99:0,566,7851	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:184,0:184:99:0,554,7684	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:1,0:2:3.01:0,3,42	./.
gi|293339394|gb|GU595196.1|	34454	.	G	C	134.46	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.143;DP=2644;Dels=0.00;FS=21.524;HRun=2;HaplotypeScore=0.9499;InbreedingCoeff=-0.0678;MQ=254.00;MQ0=0;MQRankSum=-0.155;QD=3.95;ReadPosRankSum=-4.219;SB=-16.37	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:160,0:160:99:0,482,6682	0/1:14,2:16:35.36:35,0,536	0/1:13,5:18:99:155,0,489	0/0:1,0:1:3.01:0,3,42	0/0:7,0:7:21.07:0,21,292	0/0:187,0:187:99:0,563,7809	0/0:163,0:163:99:0,491,6807	0/0:202,0:202:99:0,608,8436	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	0/0:136,0:136:99:0,409,5679	0/0:189,0:189:99:0,569,7893	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:185,0:185:99:0,557,7726	0/0:177,0:177:99:0,533,7392	0/0:173,0:173:99:0,521,7225	0/0:2,0:2:6.02:0,6,84	./.
gi|293339394|gb|GU595196.1|	34455	.	G	A	67.03	.	AC=1;AF=0.025;AN=40;BaseQRankSum=0.109;DP=2649;Dels=0.00;FS=12.309;HRun=0;HaplotypeScore=0.7999;InbreedingCoeff=-0.0400;MQ=254.00;MQ0=0;MQRankSum=0.373;QD=3.53;ReadPosRankSum=-3.402;SB=-10.26	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:161,0:161:99:0,485,6723	0/0:15,0:15:45.15:0,45,626	0/1:15,4:19:99:110,0,569	0/0:1,0:1:3.01:0,3,42	0/0:7,0:7:21.07:0,21,292	0/0:194,0:194:99:0,584,8102	0/0:164,0:164:99:0,494,6849	0/0:202,0:202:99:0,608,8436	0/0:181,0:181:99:0,545,7559	0/0:162,0:162:99:0,488,6765	0/0:137,0:137:99:0,412,5721	0/0:191,0:191:99:0,575,7976	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:2,0:2:6.02:0,6,84	./.
gi|293339394|gb|GU595196.1|	34532	.	T	G	2026.33	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-1.467;DP=2862;Dels=0.00;FS=143.707;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8483;MQ=254.00;MQ0=0;MQRankSum=-0.001;QD=38.97;ReadPosRankSum=0.020;SB=-0.02	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:179,0:179:99:0,539,7475	0/0:58,3:61:58.33:0,58,2297	0/0:77,0:77:99:0,232,3216	0/0:1,0:1:3.01:0,3,42	0/0:54,0:54:99:0,163,2255	0/0:205,0:205:99:0,617,8561	0/0:178,0:178:99:0,536,7433	0/0:198,0:198:99:0,596,8269	0/0:158,0:158:99:0,476,6598	0/0:185,0:185:99:0,557,7726	0/0:140,0:140:99:0,421,5846	0/0:170,0:170:99:0,512,7099	0/0:210,0:210:99:0,632,8770	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:167,0:167:99:0,503,6974	0/0:177,0:177:99:0,533,7392	0/0:155,0:155:99:0,467,6473	1/1:1,51:52:99:2088,115,0	./.
gi|293339394|gb|GU595196.1|	34619	.	A	G	815.51	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-1.004;DP=2736;Dels=0.00;FS=1.798;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.304;QD=38.83;ReadPosRankSum=-6.132;SB=-417.42	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:147,0:147:99:0,442,6139	0/0:78,0:78:99:0,235,3257	0/0:103,0:103:99:0,310,4301	./.	0/0:68,0:68:99:0,205,2840	0/0:178,0:178:99:0,536,7433	0/0:152,0:152:99:0,458,6348	0/0:199,0:199:99:0,599,8310	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	1/1:0,21:21:63.21:877,63,0	0/0:158,0:158:99:0,476,6598	0/0:182,0:182:99:0,548,7600	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	0/0:185,0:185:99:0,557,7726	0/0:187,0:187:99:0,563,7809	0/0:173,0:173:99:0,521,7225	0/0:49,0:49:99:0,147,2046	./.
gi|293339394|gb|GU595196.1|	34660	.	T	G	857.27	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-1.090;DP=2813;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.197;QD=38.97;ReadPosRankSum=-5.951;SB=-417.54	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	0/0:76,0:76:99:0,229,3174	0/0:95,0:95:99:0,286,3967	./.	0/0:75,0:75:99:0,226,3132	0/0:192,0:192:99:0,578,8018	0/0:175,0:175:99:0,527,7308	0/0:185,0:185:99:0,557,7726	0/0:182,0:182:99:0,548,7600	0/0:178,0:178:99:0,536,7433	1/1:0,22:22:66.22:919,66,0	0/0:155,0:155:99:0,467,6473	0/0:190,0:190:99:0,572,7934	0/0:154,0:154:99:0,464,6431	0/0:189,0:189:99:0,569,7893	0/0:191,0:191:99:0,575,7976	0/0:182,0:182:99:0,548,7600	0/0:173,0:173:99:0,521,7225	0/0:63,0:63:99:0,190,2631	./.
gi|293339394|gb|GU595196.1|	34670	.	G	A	2360.64	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-1.436;DP=2851;Dels=0.00;FS=9.505;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.365;QD=40.70;ReadPosRankSum=-4.832;SB=-1002.27	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:188,0:188:99:0,566,7851	0/0:89,0:89:99:0,268,3717	0/0:100,0:100:99:0,301,4176	./.	0/0:83,0:83:99:0,250,3466	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:181,0:181:99:0,545,7559	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	1/1:0,58:58:99:2422,175,0	0/0:162,0:162:99:0,488,6765	0/0:184,0:184:99:0,554,7684	0/0:171,0:171:99:0,515,7141	0/0:192,0:192:99:0,578,8018	0/0:183,0:183:99:0,551,7642	0/0:184,0:184:99:0,554,7684	0/0:162,0:162:99:0,488,6765	0/0:70,0:70:99:0,211,2923	./.
gi|293339394|gb|GU595196.1|	34735	.	T	G	118.34	.	AC=3;AF=0.075;AN=40;BaseQRankSum=-0.799;DP=3078;Dels=0.00;FS=29.983;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.5392;MQ=254.00;MQ0=0;MQRankSum=0.156;QD=1.46;ReadPosRankSum=4.406;SB=-9.53	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:173,0:173:99:0,521,7225	0/0:145,7:152:99:0,165,5763	0/0:177,0:177:99:0,533,7392	1/1:0,2:2:6.02:84,6,0	0/0:88,3:91:99:0,149,3550	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:180,0:180:99:0,542,7517	0/0:174,0:174:99:0,524,7266	0/0:198,0:198:99:0,596,8269	0/0:123,0:123:99:0,370,5137	0/0:190,0:190:99:0,572,7934	0/0:195,0:195:99:0,587,8143	0/0:161,0:161:99:0,485,6723	0/0:149,0:149:99:0,448,6222	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:153,0:153:99:0,461,6389	0/1:71,8:79:96.29:96,0,2727	./.
gi|293339394|gb|GU595196.1|	34751	.	A	G	193.18	.	AC=3;AF=0.075;AN=40;BaseQRankSum=0.219;DP=3028;Dels=0.00;FS=17.847;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.4504;MQ=254.00;MQ0=0;MQRankSum=-0.648;QD=2.30;ReadPosRankSum=-2.858;SB=-9.93	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:170,0:170:99:0,512,7099	0/0:142,11:153:1.17:0,1,5471	0/0:177,0:177:99:0,533,7392	1/1:0,2:2:6.02:84,6,0	0/0:100,3:103:99:0,185,4051	0/0:189,0:189:99:0,569,7893	0/0:152,0:152:99:0,458,6348	0/0:203,0:203:99:0,611,8477	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:68,0:68:99:0,205,2840	0/0:186,0:186:99:0,560,7767	0/0:203,0:203:99:0,611,8477	0/0:162,0:162:99:0,488,6765	0/0:159,0:159:99:0,479,6640	0/0:165,0:165:99:0,497,6890	0/0:184,0:184:99:0,554,7684	0/0:148,0:148:99:0,445,6181	0/1:72,10:82:99:171,0,2760	./.
gi|293339394|gb|GU595196.1|	34767	.	G	A	3581.59	.	AC=3;AF=0.079;AN=38;BaseQRankSum=0.781;DP=2946;Dels=0.00;FS=1.216;HRun=0;HaplotypeScore=0.2631;InbreedingCoeff=0.6381;MQ=254.00;MQ0=0;MQRankSum=1.018;QD=15.85;ReadPosRankSum=1.611;SB=-1704.25	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/1:130,12:142:73.70:74,0,5001	0/0:172,0:172:99:0,518,7183	./.	0/0:119,0:119:99:0,358,4969	0/0:186,0:186:99:0,560,7767	0/0:145,0:145:99:0,436,6055	0/0:196,0:196:99:0,590,8185	0/0:178,0:178:99:0,536,7433	0/0:159,0:159:99:0,479,6640	0/0:19,0:19:57.19:0,57,793	0/0:171,0:171:99:0,515,7141	0/0:189,0:189:99:0,569,7893	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	1/1:0,84:84:99:3508,253,0	./.
gi|293339394|gb|GU595196.1|	34770	.	C	T	153.61	.	AC=1;AF=0.026;AN=38;BaseQRankSum=0.544;DP=2921;Dels=0.00;FS=6.608;HRun=1;HaplotypeScore=0.8946;InbreedingCoeff=-0.0270;MQ=254.00;MQ0=0;MQRankSum=-0.639;QD=8.53;ReadPosRankSum=-3.743;SB=-26.73	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:136,0:136:99:0,409,5679	0/0:179,0:179:99:0,539,7475	./.	0/0:117,0:117:99:0,352,4886	0/0:192,0:192:99:0,578,8018	0/0:145,0:145:99:0,436,6055	0/0:193,0:193:99:0,581,8060	0/0:178,0:178:99:0,536,7433	0/0:161,0:161:99:0,485,6723	0/1:12,6:18:99:196,0,447	0/0:169,0:169:99:0,509,7057	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:90,0:90:99:0,271,3758	./.
gi|293339394|gb|GU595196.1|	34771	.	T	C	278.89	.	AC=1;AF=0.026;AN=38;BaseQRankSum=-0.289;DP=2922;Dels=0.00;FS=7.465;HRun=3;HaplotypeScore=1.0525;InbreedingCoeff=-0.0270;MQ=254.00;MQ0=0;MQRankSum=0.160;QD=15.49;ReadPosRankSum=-4.414;SB=-68.49	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:171,0:171:99:0,515,7141	0/0:137,0:137:99:0,412,5721	0/0:183,0:183:99:0,551,7642	./.	0/0:115,0:115:99:0,346,4802	0/0:193,0:193:99:0,581,8060	0/0:149,0:149:99:0,448,6222	0/0:188,0:188:99:0,566,7851	0/0:179,0:179:99:0,539,7475	0/0:158,0:158:99:0,476,6598	0/1:9,9:18:99:322,0,322	0/0:167,0:167:99:0,503,6974	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:89,0:89:99:0,268,3717	./.
gi|293339394|gb|GU595196.1|	34772	.	G	C	70.09	.	AC=1;AF=0.026;AN=38;BaseQRankSum=-0.970;DP=2928;Dels=0.00;FS=2.043;HRun=1;HaplotypeScore=1.0525;InbreedingCoeff=-0.0270;MQ=254.00;MQ0=0;MQRankSum=-0.039;QD=3.89;ReadPosRankSum=-3.306;SB=-23.72	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:167,0:167:99:0,503,6974	0/0:132,0:132:99:0,397,5512	0/0:187,0:187:99:0,563,7809	./.	0/0:118,0:118:99:0,355,4928	0/0:190,0:190:99:0,572,7934	0/0:151,0:151:99:0,455,6306	0/0:191,0:191:99:0,575,7976	0/0:179,0:179:99:0,539,7475	0/0:156,0:156:99:0,470,6515	0/1:14,4:18:99:113,0,530	0/0:166,0:166:99:0,500,6932	0/0:187,0:187:99:0,563,7809	0/0:157,0:157:99:0,473,6556	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:89,0:89:99:0,268,3717	./.
gi|293339394|gb|GU595196.1|	34817	.	T	A	350.45	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-0.568;DP=2970;Dels=0.00;FS=40.411;HRun=0;HaplotypeScore=0.5789;InbreedingCoeff=-0.0556;MQ=254.00;MQ0=0;MQRankSum=-0.681;QD=1.65;ReadPosRankSum=0.133;SB=-0.02	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:152,0:152:99:0,458,6348	0/1:102,10:112:80.48:80,0,3922	0/0:171,0:171:99:0,515,7141	./.	0/0:101,1:102:99:0,265,4176	0/0:182,0:182:99:0,548,7600	0/0:170,0:170:99:0,512,7099	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:115,0:115:99:0,346,4802	0/0:161,0:161:99:0,485,6723	0/0:182,0:182:99:0,548,7600	0/0:145,0:145:99:0,436,6055	0/0:174,0:174:99:0,524,7266	0/0:184,0:184:99:0,554,7684	0/0:170,0:170:99:0,512,7099	0/0:158,0:158:99:0,476,6598	0/1:85,15:100:99:325,0,3249	./.
gi|293339394|gb|GU595196.1|	34826	.	G	C	112.58	.	AC=1;AF=0.026;AN=38;BaseQRankSum=-0.253;DP=2971;Dels=0.00;FS=19.217;HRun=1;HaplotypeScore=0.5262;InbreedingCoeff=-0.0270;MQ=254.00;MQ0=0;MQRankSum=0.046;QD=1.11;ReadPosRankSum=-2.983;SB=-0.02	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:156,0:156:99:0,470,6515	0/0:114,0:114:99:0,343,4761	0/0:169,0:169:99:0,509,7057	./.	0/0:98,0:98:99:0,295,4093	0/0:193,0:193:99:0,581,8060	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:115,0:115:99:0,346,4802	0/0:155,0:155:99:0,467,6473	0/0:184,0:184:99:0,554,7684	0/0:144,0:144:99:0,433,6013	0/0:177,0:177:99:0,533,7392	0/0:178,0:178:99:0,536,7433	0/0:159,0:159:99:0,479,6640	0/0:155,0:155:99:0,467,6473	0/1:90,11:101:99:155,0,3454	./.
gi|293339394|gb|GU595196.1|	34987	.	A	G	77.60	.	AC=1;AF=0.026;AN=38;BaseQRankSum=-0.492;DP=2950;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=-0.0270;MQ=254.00;MQ0=0;MQRankSum=1.425;QD=1.09;ReadPosRankSum=-4.821;SB=-1.89	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	0/0:105,5:110:99:0,122,4176	0/0:138,0:138:99:0,415,5763	./.	0/0:75,0:75:99:0,226,3132	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	0/0:183,0:183:99:0,551,7642	0/0:179,0:179:99:0,539,7475	0/0:181,0:181:99:0,545,7559	0/0:134,0:134:99:0,403,5596	0/0:165,0:165:99:0,497,6890	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	0/0:155,0:155:99:0,467,6473	0/0:170,0:170:99:0,512,7099	0/1:63,8:71:99:120,0,2417	./.
gi|293339394|gb|GU595196.1|	35011	.	T	C	1513.72	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-1.080;DP=2965;Dels=0.00;FS=1.059;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=-0.0556;MQ=254.00;MQ0=0;MQRankSum=-0.795;QD=7.07;ReadPosRankSum=4.204;SB=-661.38	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/1:103,25:128:99:659,0,3916	0/0:137,0:137:99:0,412,5721	./.	0/0:64,0:64:99:0,193,2673	0/0:169,0:169:99:0,509,7057	0/0:195,0:195:99:0,587,8143	0/0:172,0:172:99:0,518,7183	0/0:193,0:193:99:0,581,8060	0/0:193,0:193:99:0,581,8060	0/0:130,0:130:99:0,391,5429	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	0/0:155,0:155:99:0,467,6473	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/1:58,28:86:99:910,0,2163	./.
gi|293339394|gb|GU595196.1|	35167	.	G	C	1593.40	.	AC=1;AF=0.026;AN=38;BaseQRankSum=-0.635;DP=2890;Dels=0.00;FS=111.350;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=-0.0270;MQ=254.00;MQ0=0;MQRankSum=-0.325;QD=30.06;ReadPosRankSum=1.480;SB=-0.02	GT:AD:DP:GQ:PL	0/0:201,0:201:99:0,605,8394	0/0:177,0:177:99:0,533,7392	0/0:83,0:83:99:0,250,3466	0/0:82,0:82:99:0,247,3424	./.	0/0:45,0:45:99:0,135,1879	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:183,0:183:99:0,551,7642	0/0:200,0:200:99:0,602,8352	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	0/0:146,0:146:99:0,439,6097	0/0:161,0:161:99:0,485,6723	0/0:205,0:205:99:0,617,8561	0/0:161,0:161:99:0,485,6723	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/1:10,43:53:99:1636,0,258	./.
gi|293339394|gb|GU595196.1|	35212	.	T	C	412.25	.	AC=3;AF=0.079;AN=38;BaseQRankSum=-0.504;DP=2614;Dels=0.00;FS=35.756;HRun=0;HaplotypeScore=0.5262;InbreedingCoeff=0.6362;MQ=254.00;MQ0=0;MQRankSum=0.326;QD=14.72;ReadPosRankSum=-3.111;SB=-0.02	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	0/1:15,5:20:99:149,0,566	0/0:18,0:18:54.18:0,54,752	./.	0/0:13,0:13:39.13:0,39,543	0/0:183,0:183:99:0,551,7642	0/0:202,0:202:99:0,608,8436	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:185,0:185:99:0,557,7726	0/0:165,0:165:99:0,497,6890	0/0:151,0:151:99:0,455,6306	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:147,0:147:99:0,442,6139	0/0:166,0:166:99:0,500,6932	1/1:0,8:8:24.08:334,24,0	./.
gi|293339394|gb|GU595196.1|	35218	.	C	T	154.61	.	AC=3;AF=0.079;AN=38;BaseQRankSum=0.226;DP=2582;Dels=0.00;FS=15.023;HRun=1;HaplotypeScore=0.7894;InbreedingCoeff=0.5955;MQ=254.00;MQ0=0;MQRankSum=0.460;QD=11.04;ReadPosRankSum=-3.299;SB=-0.02	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:157,0:157:99:0,473,6556	0/1:8,2:10:53.42:53,0,304	0/0:13,0:13:39.13:0,39,543	./.	0/0:4,0:4:12.04:0,12,167	0/0:187,0:187:99:0,563,7809	0/0:192,0:192:99:0,578,8018	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:192,0:192:99:0,578,8018	0/0:169,0:169:99:0,509,7057	0/0:153,0:153:99:0,461,6389	0/0:162,0:162:99:0,488,6765	0/0:155,0:155:99:0,467,6473	0/0:139,0:139:99:0,418,5805	0/0:174,0:174:99:0,524,7266	1/1:0,4:4:12.04:167,12,0	./.
gi|293339394|gb|GU595196.1|	35222	.	C	A	308.52	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.124;DP=2587;Dels=0.00;FS=27.067;HRun=0;HaplotypeScore=0.4444;InbreedingCoeff=-0.0623;MQ=254.00;MQ0=0;MQRankSum=1.343;QD=17.14;ReadPosRankSum=-5.105;SB=-22.04	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:152,0:152:99:0,458,6348	0/1:3,3:6:99:107,0,107	0/1:5,7:12:99:256,0,173	./.	0/0:3,0:3:9.03:0,9,125	0/0:194,0:194:99:0,584,8102	0/0:183,0:183:99:0,551,7642	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:176,0:176:99:0,530,7350	0/0:172,0:172:99:0,518,7183	0/0:192,0:192:99:0,578,8018	0/0:170,0:170:99:0,512,7099	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:162,0:162:99:0,488,6765	0/0:143,0:143:99:0,430,5972	0/0:175,0:175:99:0,527,7308	./.	./.
gi|293339394|gb|GU595196.1|	35223	.	G	A,T	165.85	.	AC=2,2;AF=0.056,0.056;AN=36;BaseQRankSum=-0.387;DP=2574;Dels=0.00;FS=12.041;HaplotypeScore=0.1666;InbreedingCoeff=-0.0034;MQ=254.00;MQ0=0;MQRankSum=-2.067;QD=9.21;ReadPosRankSum=-4.806;SB=-8.98	GT:AD:DP:GQ:PL	0/0:178,0,0:178:99:0,536,7433,536,7433,7433	0/0:151,0,0:151:99:0,455,6306,455,6306,6306	0/2:3,0,1:4:29.72:30,39,155,0,116,113	0/2:7,0,4:11:99:134,155,426,0,271,259	./.	1/1:0,3,0:3:9.03:125,9,0,125,9,125	0/0:192,0,0:192:99:0,578,8018,578,8018,8018	0/0:182,0,0:182:99:0,548,7600,548,7600,7600	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:180,0,0:180:99:0,542,7517,542,7517,7517	0/0:178,0,0:178:99:0,536,7433,536,7433,7433	0/0:169,0,0:169:99:0,509,7057,509,7057,7057	0/0:192,0,0:192:99:0,578,8018,578,8018,8018	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:153,0,0:153:99:0,461,6389,461,6389,6389	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	0/0:144,0,0:144:99:0,433,6013,433,6013,6013	0/0:174,0,0:174:99:0,524,7266,524,7266,7266	./.	./.
gi|293339394|gb|GU595196.1|	35589	.	T	A	297.06	.	AC=1;AF=0.029;AN=34;BaseQRankSum=0.900;DP=2683;Dels=0.00;FS=2.670;HRun=1;HaplotypeScore=0.1764;InbreedingCoeff=-0.0303;MQ=254.00;MQ0=0;MQRankSum=0.102;QD=11.43;ReadPosRankSum=-4.809;SB=-121.91	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:106,0:106:99:0,319,4427	0/0:183,0:183:99:0,551,7642	./.	./.	0/0:183,0:183:99:0,551,7642	0/0:185,0:185:99:0,557,7726	0/0:159,0:159:99:0,479,6640	0/0:152,0:152:99:0,458,6348	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:158,0:158:99:0,476,6598	0/1:16,10:26:99:339,0,590	0/0:186,0:186:99:0,560,7767	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	0/0:155,0:155:99:0,467,6473	./.	./.
gi|293339394|gb|GU595196.1|	36813	.	G	C	2464.72	.	AC=4;AF=0.118;AN=34;BaseQRankSum=-0.376;DP=2042;Dels=0.00;FS=160.611;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.255;QD=40.41;ReadPosRankSum=-4.525;SB=-0.02	GT:AD:DP:GQ:PL	0/0:147,0:147:99:0,442,6139	0/0:165,0:165:99:0,497,6890	1/1:0,25:25:75.25:1044,75,0	1/1:0,36:36:99:1503,108,0	./.	./.	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:157,0:157:99:0,473,6556	0/0:45,0:45:99:0,135,1879	0/0:168,0:168:99:0,506,7016	0/0:35,0:35:99:0,105,1462	0/0:36,0:36:99:0,108,1503	0/0:42,0:42:99:0,126,1754	0/0:185,0:185:99:0,557,7726	0/0:155,0:155:99:0,467,6473	0/0:155,0:155:99:0,467,6473	0/0:161,0:161:99:0,485,6723	0/0:193,0:193:99:0,581,8060	./.	./.
gi|293339394|gb|GU595196.1|	36829	.	T	C	141.39	.	AC=4;AF=0.118;AN=34;BaseQRankSum=-0.317;DP=1868;Dels=0.00;FS=12.063;HRun=1;HaplotypeScore=0.2941;InbreedingCoeff=0.8698;MQ=254.00;MQ0=0;MQRankSum=1.137;QD=28.28;ReadPosRankSum=-3.808;SB=-0.02	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:182,0:182:99:0,548,7600	1/1:0,1:1:3.01:42,3,0	1/1:0,4:4:12.04:167,12,0	./.	./.	0/0:183,0:183:99:0,551,7642	0/0:180,0:180:99:0,542,7517	0/0:145,0:145:99:0,436,6055	0/0:8,0:8:24.08:0,24,334	0/0:173,0:173:99:0,521,7225	0/0:7,0:7:21.07:0,21,292	0/0:6,0:6:18.06:0,18,251	0/0:8,0:8:24.08:0,24,334	0/0:175,0:175:99:0,527,7308	0/0:157,0:157:99:0,473,6556	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:175,0:175:99:0,527,7308	./.	./.
gi|293339394|gb|GU595196.1|	36831	.	T	C	651.61	.	AC=8;AF=0.267;AN=30;BaseQRankSum=-1.555;DP=1859;Dels=0.00;FS=54.844;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9519;MQ=254.00;MQ0=0;MQRankSum=0.310;QD=36.20;ReadPosRankSum=-6.744;SB=-0.02	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:184,0:184:99:0,554,7684	./.	./.	./.	./.	0/0:186,0:186:99:0,560,7767	0/0:182,0:182:99:0,548,7600	0/0:140,0:140:99:0,421,5846	1/1:0,5:5:15.05:209,15,0	0/0:177,0:177:99:0,533,7392	1/1:0,2:2:6.02:84,6,0	1/1:0,6:6:18.06:251,18,0	1/1:0,5:5:15.05:209,15,0	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	0/0:152,0:152:99:0,458,6348	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	./.	./.
gi|293339394|gb|GU595196.1|	36832	.	C	A	406.68	.	AC=8;AF=0.267;AN=30;BaseQRankSum=-0.980;DP=1859;Dels=0.00;FS=33.268;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9146;MQ=254.00;MQ0=0;MQRankSum=0.668;QD=33.89;ReadPosRankSum=-5.760;SB=-0.02	GT:AD:DP:GQ:PL	0/0:147,0:147:99:0,442,6139	0/0:184,0:184:99:0,554,7684	./.	./.	./.	./.	0/0:187,0:187:99:0,563,7809	0/0:180,0:180:99:0,542,7517	0/0:139,0:139:99:0,418,5805	1/1:0,3:3:9.03:125,9,0	0/0:179,0:179:99:0,539,7475	1/1:0,2:2:6.02:84,6,0	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:12.04:167,12,0	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	./.	./.
gi|293339394|gb|GU595196.1|	36900	.	G	T	183.44	.	AC=4;AF=0.154;AN=26;BaseQRankSum=0.049;DP=1914;Dels=0.00;FS=18.370;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9192;MQ=254.00;MQ0=0;MQRankSum=-0.094;QD=30.57;ReadPosRankSum=-1.834;SB=-0.02	GT:AD:DP:GQ:PL	0/0:205,0:205:99:0,617,8561	0/0:173,0:173:99:0,521,7225	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	./.	./.	0/0:160,0:160:99:0,482,6682	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	./.	0/0:190,0:190:99:0,572,7934	./.	./.	./.	0/0:155,0:155:99:0,467,6473	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:187,0:187:99:0,563,7809	0/0:157,0:157:99:0,473,6556	./.	./.
gi|293339394|gb|GU595196.1|	36911	.	C	T	448.09	.	AC=8;AF=0.235;AN=34;BaseQRankSum=0.755;DP=1927;Dels=0.00;FS=36.260;HRun=0;HaplotypeScore=0.3529;InbreedingCoeff=0.8346;MQ=254.00;MQ0=0;MQRankSum=0.645;QD=34.47;ReadPosRankSum=-1.331;SB=-0.02	GT:AD:DP:GQ:PL	0/0:201,0:201:99:0,605,8394	0/0:176,0:176:99:0,530,7350	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.04:0,12,167	./.	./.	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:147,0:147:99:0,442,6139	1/1:0,6:6:18.06:251,18,0	0/0:188,0:188:99:0,566,7851	1/1:0,5:5:15.05:209,15,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	0/0:164,0:164:99:0,494,6849	0/0:192,0:192:99:0,578,8018	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:160,0:160:99:0,482,6682	./.	./.
gi|293339394|gb|GU595196.1|	36919	.	G	C	181.11	.	AC=4;AF=0.118;AN=34;BaseQRankSum=0.403;DP=1890;Dels=0.00;FS=15.062;HRun=4;HaplotypeScore=0.3529;InbreedingCoeff=0.7491;MQ=254.00;MQ0=0;MQRankSum=0.032;QD=30.18;ReadPosRankSum=3.816;SB=-0.02	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:167,0:167:99:0,503,6974	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	./.	./.	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:136,0:136:99:0,409,5679	0/0:6,0:6:18.06:0,18,251	0/0:185,0:185:99:0,557,7726	0/0:5,0:5:15.05:0,15,209	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:164,0:164:99:0,494,6849	0/0:193,0:193:99:0,581,8060	0/0:180,0:180:99:0,542,7517	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	./.	./.
gi|293339394|gb|GU595196.1|	36925	.	T	C	448.09	.	AC=8;AF=0.235;AN=34;BaseQRankSum=-0.159;DP=1883;Dels=0.00;FS=36.077;HRun=0;HaplotypeScore=0.3529;InbreedingCoeff=0.8346;MQ=254.00;MQ0=0;MQRankSum=-0.911;QD=34.47;ReadPosRankSum=5.613;SB=-0.02	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.04:0,12,167	./.	./.	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:131,0:131:99:0,394,5471	1/1:0,6:6:18.06:251,18,0	0/0:192,0:192:99:0,578,8018	1/1:0,5:5:15.05:209,15,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:178,0:178:99:0,536,7433	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	./.	./.
gi|293339394|gb|GU595196.1|	37091	.	C	T	7391.60	.	AC=2;AF=0.091;AN=22;BaseQRankSum=-0.750;DP=1916;Dels=0.00;FS=1.233;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.039;QD=41.76;ReadPosRankSum=-1.268;SB=-3674.93	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	./.	./.	./.	./.	1/1:0,177:177:99:7392,533,0	0/0:197,0:197:99:0,593,8227	0/0:144,0:144:99:0,433,6013	./.	0/0:173,0:173:99:0,521,7225	./.	./.	./.	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	0/0:196,0:196:99:0,590,8185	0/0:165,0:165:99:0,497,6890	./.	./.
gi|293339394|gb|GU595196.1|	37092	.	A	C	7516.88	.	AC=2;AF=0.091;AN=22;BaseQRankSum=-0.329;DP=1926;Dels=0.00;FS=1.225;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.056;QD=41.76;ReadPosRankSum=-1.467;SB=-3758.45	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	./.	./.	./.	./.	1/1:0,180:180:99:7517,542,0	0/0:199,0:199:99:0,599,8310	0/0:147,0:147:99:0,442,6139	./.	0/0:172,0:172:99:0,518,7183	./.	./.	./.	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:168,0:168:99:0,506,7016	0/0:194,0:194:99:0,584,8102	0/0:167,0:167:99:0,503,6974	./.	./.
gi|293339394|gb|GU595196.1|	39670	.	G	T	135.71	.	AC=6;AF=0.214;AN=28;BaseQRankSum=1.449;DP=1859;Dels=0.00;FS=15.110;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8169;MQ=254.00;MQ0=0;MQRankSum=-0.362;QD=27.14;ReadPosRankSum=-3.362;SB=-0.02	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:159,0:159:99:0,479,6640	./.	./.	./.	./.	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	1/1:0,1:1:3.01:42,3,0	0/0:165,0:165:99:0,497,6890	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	./.	0/0:164,0:164:99:0,494,6849	0/0:187,0:187:99:0,563,7809	0/0:160,0:160:99:0,482,6682	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	./.	./.
gi|293339394|gb|GU595196.1|	39673	.	A	G	450.77	.	AC=8;AF=0.267;AN=30;BaseQRankSum=0.176;DP=1856;Dels=0.00;FS=39.379;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8824;MQ=254.00;MQ0=0;MQRankSum=0.002;QD=34.67;ReadPosRankSum=-4.799;SB=-0.02	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:156,0:156:99:0,470,6515	./.	./.	./.	./.	0/0:183,0:183:99:0,551,7642	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	1/1:0,2:2:6.02:84,6,0	0/0:162,0:162:99:0,488,6765	1/1:0,3:3:9.03:125,9,0	1/1:0,7:7:21.07:292,21,0	1/1:0,1:1:3.01:42,3,0	0/0:165,0:165:99:0,497,6890	0/0:188,0:188:99:0,566,7851	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	./.	./.
gi|293339394|gb|GU595196.1|	39817	.	T	A	208.64	.	AC=8;AF=0.267;AN=30;BaseQRankSum=-0.933;DP=1848;Dels=0.00;FS=17.989;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8015;MQ=254.00;MQ0=0;MQRankSum=-1.483;QD=29.81;ReadPosRankSum=-3.146;SB=-0.02	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:158,0:158:99:0,476,6598	./.	./.	./.	./.	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	1/1:0,1:1:3.01:42,3,0	0/0:173,0:173:99:0,521,7225	1/1:0,1:1:3.01:42,3,0	1/1:0,4:4:12.04:167,12,0	1/1:0,1:1:3.01:42,3,0	0/0:168,0:168:99:0,506,7016	0/0:151,0:151:99:0,455,6306	0/0:178,0:178:99:0,536,7433	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	./.	./.
gi|293339394|gb|GU595196.1|	39889	.	T	G	115.52	.	AC=2;AF=0.083;AN=24;BaseQRankSum=-1.541;DP=1792;Dels=0.00;FS=9.034;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9670;MQ=254.00;MQ0=0;MQRankSum=0.817;QD=28.88;ReadPosRankSum=2.344;SB=-0.02	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:150,0:150:99:0,452,6264	./.	./.	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	./.	0/0:156,0:156:99:0,470,6515	./.	1/1:0,4:4:12.04:167,12,0	./.	0/0:155,0:155:99:0,467,6473	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	0/0:153,0:153:99:0,461,6389	0/0:168,0:168:99:0,506,7016	./.	./.
gi|293339394|gb|GU595196.1|	39918	.	T	G	37.09	.	AC=2;AF=0.083;AN=24;BaseQRankSum=0.627;DP=1769;Dels=0.00;FS=3.001;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8799;MQ=254.00;MQ0=0;MQRankSum=0.602;QD=18.55;ReadPosRankSum=-2.395;SB=-0.02	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	./.	./.	./.	./.	0/0:172,0:172:99:0,518,7183	0/0:153,0:153:99:0,461,6389	0/0:150,0:150:99:0,452,6264	./.	0/0:156,0:156:99:0,470,6515	./.	1/1:0,2:2:6.02:84,6,0	./.	0/0:154,0:154:99:0,464,6431	0/0:152,0:152:99:0,458,6348	0/0:177,0:177:99:0,533,7392	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	./.	./.
gi|293339394|gb|GU595196.1|	41399	.	C	G	143.67	.	AC=4;AF=0.154;AN=26;BaseQRankSum=-0.556;DP=1794;Dels=0.00;FS=15.369;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9017;MQ=254.00;MQ0=0;MQRankSum=0.265;QD=28.73;ReadPosRankSum=-3.633;SB=-0.02	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	./.	./.	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	0/0:185,0:185:99:0,557,7726	0/0:161,0:161:99:0,485,6723	0/0:134,0:134:99:0,403,5596	./.	0/0:167,0:167:99:0,503,6974	./.	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:151,0:151:99:0,455,6306	0/0:155,0:155:99:0,467,6473	0/0:150,0:150:99:0,452,6264	0/0:186,0:186:99:0,560,7767	./.	./.
gi|293339394|gb|GU595196.1|	41444	.	A	G	5929.99	.	AC=6;AF=0.214;AN=28;BaseQRankSum=1.606;DP=1959;Dels=0.00;FS=411.066;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.834;QD=41.76;ReadPosRankSum=2.064;SB=-0.02	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:146,0:146:99:0,439,6097	./.	./.	1/1:0,46:46:99:1921,138,0	1/1:0,45:45:99:1879,135,0	0/0:171,0:171:99:0,515,7141	0/0:156,0:156:99:0,470,6515	0/0:153,0:153:99:0,461,6389	./.	0/0:169,0:169:99:0,509,7057	./.	./.	./.	0/0:187,0:187:99:0,563,7809	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:148,0:148:99:0,445,6181	0/0:159,0:159:99:0,479,6640	1/1:0,51:51:99:2130,154,0	./.
gi|293339394|gb|GU595196.1|	41488	.	C	T	6013.51	.	AC=6;AF=0.214;AN=28;BaseQRankSum=-2.755;DP=2037;Dels=0.00;FS=407.780;HRun=4;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.531;QD=41.76;ReadPosRankSum=0.388;SB=-0.02	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:169,0:169:99:0,509,7057	./.	./.	1/1:0,48:48:99:2004,144,0	1/1:0,61:61:99:2547,184,0	0/0:192,0:192:99:0,578,8018	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	./.	0/0:174,0:174:99:0,524,7266	./.	./.	./.	0/0:189,0:189:99:0,569,7893	0/0:146,0:146:99:0,439,6097	0/0:178,0:178:99:0,536,7433	0/0:169,0:169:99:0,509,7057	0/0:156,0:156:99:0,470,6515	1/1:0,35:35:99:1462,105,0	./.
gi|293339394|gb|GU595196.1|	41732	.	G	A	12235.80	.	AC=6;AF=0.214;AN=28;BaseQRankSum=0.168;DP=2098;Dels=0.00;FS=0.224;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.007;QD=41.76;ReadPosRankSum=-0.556;SB=-6097.03	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	./.	./.	1/1:0,96:96:99:4009,289,0	1/1:0,122:122:99:5095,367,0	0/0:159,0:159:99:0,479,6640	0/0:176,0:176:99:0,530,7350	0/0:157,0:157:99:0,473,6556	./.	0/0:159,0:159:99:0,479,6640	./.	./.	./.	0/0:171,0:171:99:0,515,7141	0/0:152,0:152:99:0,458,6348	0/0:167,0:167:99:0,503,6974	0/0:186,0:186:99:0,560,7767	0/0:151,0:151:99:0,455,6306	1/1:0,75:75:99:3132,226,0	./.
gi|293339394|gb|GU595196.1|	41764	.	T	G	12068.76	.	AC=6;AF=0.214;AN=28;BaseQRankSum=-0.143;DP=2061;Dels=0.00;FS=5.083;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.000;QD=41.76;ReadPosRankSum=-1.149;SB=-5637.66	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:138,0:138:99:0,415,5763	./.	./.	1/1:0,97:97:99:4051,292,0	1/1:0,110:110:99:4594,331,0	0/0:157,0:157:99:0,473,6556	0/0:158,0:158:99:0,476,6598	0/0:156,0:156:99:0,470,6515	./.	0/0:166,0:166:99:0,500,6932	./.	./.	./.	0/0:175,0:175:99:0,527,7308	0/0:157,0:157:99:0,473,6556	0/0:153,0:153:99:0,461,6389	0/0:197,0:197:99:0,593,8227	0/0:161,0:161:99:0,485,6723	1/1:0,82:82:99:3424,247,0	./.
gi|293339394|gb|GU595196.1|	41869	.	C	T	8936.73	.	AC=6;AF=0.214;AN=28;BaseQRankSum=-0.184;DP=2058;Dels=0.00;FS=44.548;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.458;QD=41.76;ReadPosRankSum=-0.008;SB=-3215.56	GT:AD:DP:GQ:PL	0/0:197,0:197:99:0,593,8227	0/0:146,0:146:99:0,439,6097	./.	./.	1/1:0,65:65:99:2714,196,0	1/1:0,88:88:99:3675,265,0	0/0:182,0:182:99:0,548,7600	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	./.	0/0:159,0:159:99:0,479,6640	./.	./.	./.	0/0:154,0:154:99:0,464,6431	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:138,0:138:99:0,415,5763	0/0:186,0:186:99:0,560,7767	1/1:0,61:61:99:2547,184,0	./.
gi|293339394|gb|GU595196.1|	41894	.	G	A	7642.16	.	AC=6;AF=0.214;AN=28;BaseQRankSum=-0.106;DP=2057;Dels=0.00;FS=126.997;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.878;QD=41.76;ReadPosRankSum=-0.118;SB=-1837.47	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:155,0:155:99:0,467,6473	./.	./.	1/1:0,53:53:99:2213,160,0	1/1:0,78:78:99:3257,235,0	0/0:176,0:176:99:0,530,7350	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	./.	0/0:173,0:173:99:0,521,7225	./.	./.	./.	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	1/1:0,52:52:99:2172,157,0	./.
gi|293339394|gb|GU595196.1|	41969	.	T	C	5762.94	.	AC=6;AF=0.214;AN=28;BaseQRankSum=0.391;DP=2040;Dels=0.00;FS=387.055;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.212;QD=41.76;ReadPosRankSum=0.906;SB=-0.02	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	./.	./.	1/1:0,43:43:99:1796,129,0	1/1:0,59:59:99:2464,178,0	0/0:191,0:191:99:0,575,7976	0/0:168,0:168:99:0,506,7016	0/0:152,0:152:99:0,458,6348	./.	0/0:180,0:180:99:0,542,7517	./.	./.	./.	0/0:182,0:182:99:0,548,7600	0/0:180,0:180:99:0,542,7517	0/0:173,0:173:99:0,521,7225	0/0:153,0:153:99:0,461,6389	0/0:184,0:184:99:0,554,7684	1/1:0,36:36:99:1503,108,0	./.
gi|293339394|gb|GU595196.1|	42011	.	T	C	6431.11	.	AC=6;AF=0.214;AN=28;BaseQRankSum=-0.738;DP=2010;Dels=0.00;FS=442.290;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.458;QD=41.76;ReadPosRankSum=-0.469;SB=-0.02	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:182,0:182:99:0,548,7600	./.	./.	1/1:0,43:43:99:1796,129,0	1/1:0,77:77:99:3216,232,0	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:159,0:159:99:0,479,6640	./.	0/0:155,0:155:99:0,467,6473	./.	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:164,0:164:99:0,494,6849	1/1:0,34:34:99:1420,102,0	./.
gi|293339394|gb|GU595196.1|	42035	.	G	A	6305.83	.	AC=6;AF=0.214;AN=28;BaseQRankSum=-0.013;DP=1989;Dels=0.00;FS=424.587;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.623;QD=41.76;ReadPosRankSum=0.755;SB=-0.02	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:161,0:161:99:0,485,6723	./.	./.	1/1:0,49:49:99:2046,147,0	1/1:0,74:74:99:3090,223,0	0/0:163,0:163:99:0,491,6807	0/0:158,0:158:99:0,476,6598	0/0:146,0:146:99:0,439,6097	./.	0/0:160,0:160:99:0,482,6682	./.	./.	./.	0/0:177,0:177:99:0,533,7392	0/0:187,0:187:99:0,563,7809	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:153,0:153:99:0,461,6389	1/1:0,28:28:84.28:1169,84,0	./.
gi|293339394|gb|GU595196.1|	42092	.	A	G	254.31	.	AC=6;AF=0.214;AN=28;BaseQRankSum=-0.085;DP=1960;Dels=0.00;FS=24.180;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8968;MQ=254.00;MQ0=0;MQRankSum=0.497;QD=31.79;ReadPosRankSum=-4.536;SB=-0.02	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:184,0:184:99:0,554,7684	./.	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	0/0:215,0:215:99:0,647,8978	0/0:171,0:171:99:0,515,7141	0/0:184,0:184:99:0,554,7684	./.	0/0:156,0:156:99:0,470,6515	./.	./.	./.	0/0:162,0:162:99:0,488,6765	0/0:193,0:193:99:0,581,8060	0/0:146,0:146:99:0,439,6097	0/0:165,0:165:99:0,497,6890	0/0:200,0:200:99:0,602,8352	1/1:0,2:2:6.02:84,6,0	./.
gi|293339394|gb|GU595196.1|	42093	.	T	G	135.38	.	AC=6;AF=0.214;AN=28;BaseQRankSum=-0.959;DP=1952;Dels=0.00;FS=12.063;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8285;MQ=254.00;MQ0=0;MQRankSum=0.766;QD=27.08;ReadPosRankSum=-3.728;SB=-0.02	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:214,0:214:99:0,644,8937	0/0:171,0:171:99:0,515,7141	0/0:182,0:182:99:0,548,7600	./.	0/0:158,0:158:99:0,476,6598	./.	./.	./.	0/0:161,0:161:99:0,485,6723	0/0:191,0:191:99:0,575,7976	0/0:147,0:147:99:0,442,6139	0/0:165,0:165:99:0,497,6890	0/0:200,0:200:99:0,602,8352	1/1:0,2:2:6.02:84,6,0	./.
gi|293339394|gb|GU595196.1|	54665	.	G	A	183.46	.	AC=4;AF=0.133;AN=30;BaseQRankSum=-0.172;DP=1834;Dels=0.00;FS=18.298;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.7502;MQ=254.00;MQ0=0;MQRankSum=-0.185;QD=30.58;ReadPosRankSum=-2.475;SB=-0.02	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:172,0:172:99:0,518,7183	1/1:0,1:1:3.01:42,3,0	1/1:0,5:5:15.05:209,15,0	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	./.	0/0:167,0:167:99:0,503,6974	0/0:2,0:2:6.02:0,6,84	0/0:1,0:1:3.01:0,3,42	./.	0/0:179,0:179:99:0,539,7475	0/0:164,0:164:99:0,494,6849	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:161,0:161:99:0,485,6723	./.	./.
gi|293339394|gb|GU595196.1|	54686	.	A	G	369.43	.	AC=8;AF=0.267;AN=30;BaseQRankSum=0.216;DP=1867;Dels=0.00;FS=30.068;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8638;MQ=254.00;MQ0=0;MQRankSum=-0.153;QD=33.58;ReadPosRankSum=4.629;SB=-0.02	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:172,0:172:99:0,518,7183	1/1:0,2:2:6.02:84,6,0	1/1:0,6:6:18.06:251,18,0	./.	./.	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	./.	0/0:157,0:157:99:0,473,6556	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	0/0:182,0:182:99:0,548,7600	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:189,0:189:99:0,569,7893	0/0:152,0:152:99:0,458,6348	./.	./.
gi|293339394|gb|GU595196.1|	54713	.	C	A	175.74	.	AC=6;AF=0.214;AN=28;BaseQRankSum=0.548;DP=1923;Dels=0.00;FS=15.059;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8305;MQ=254.00;MQ0=0;MQRankSum=-0.377;QD=29.29;ReadPosRankSum=0.252;SB=-0.02	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:172,0:172:99:0,518,7183	1/1:0,4:4:12.04:167,12,0	1/1:0,1:1:3.01:42,3,0	./.	./.	0/0:181,0:181:99:0,545,7559	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	./.	0/0:185,0:185:99:0,557,7726	1/1:0,1:1:3.01:42,3,0	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:199,0:199:99:0,599,8310	0/0:161,0:161:99:0,485,6723	./.	./.
gi|293339394|gb|GU595196.1|	54716	.	A	T	76.17	.	AC=2;AF=0.083;AN=24;BaseQRankSum=-0.119;DP=1874;Dels=0.00;FS=6.018;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9361;MQ=254.00;MQ0=0;MQRankSum=-0.211;QD=25.39;ReadPosRankSum=2.130;SB=-0.02	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:166,0:166:99:0,500,6932	1/1:0,3:3:9.03:125,9,0	./.	./.	./.	0/0:178,0:178:99:0,536,7433	0/0:154,0:154:99:0,464,6431	0/0:161,0:161:99:0,485,6723	./.	0/0:183,0:183:99:0,551,7642	./.	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:198,0:198:99:0,596,8269	0/0:160,0:160:99:0,482,6682	./.	./.
gi|293339394|gb|GU595196.1|	54772	.	C	G	280.89	.	AC=1;AF=0.045;AN=22;BaseQRankSum=-0.287;DP=1696;Dels=0.00;FS=1.228;HRun=2;HaplotypeScore=1.8179;InbreedingCoeff=-0.0476;MQ=254.00;MQ0=0;MQRankSum=-1.967;QD=8.78;ReadPosRankSum=-5.076;SB=-124.92	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:143,0:143:99:0,430,5972	./.	./.	./.	./.	0/1:22,10:32:99:321,0,822	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	./.	0/0:157,0:157:99:0,473,6556	./.	./.	./.	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	0/0:169,0:169:99:0,509,7057	0/0:195,0:195:99:0,587,8143	./.	./.
gi|293339394|gb|GU595196.1|	54773	.	G	C	370.43	.	AC=1;AF=0.045;AN=22;BaseQRankSum=0.444;DP=1692;Dels=0.00;FS=1.113;HRun=1;HaplotypeScore=1.9997;InbreedingCoeff=-0.0476;MQ=254.00;MQ0=0;MQRankSum=-0.865;QD=12.35;ReadPosRankSum=-5.148;SB=-169.69	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:145,0:145:99:0,436,6055	./.	./.	./.	./.	0/1:18,12:30:99:411,0,661	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	./.	0/0:157,0:157:99:0,473,6556	./.	./.	./.	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	0/0:193,0:193:99:0,581,8060	./.	./.
gi|293339394|gb|GU595196.1|	54774	.	G	C	424.23	.	AC=1;AF=0.045;AN=22;BaseQRankSum=0.244;DP=1694;Dels=0.00;FS=5.749;HRun=2;HaplotypeScore=1.4544;InbreedingCoeff=-0.0476;MQ=254.00;MQ0=0;MQRankSum=1.068;QD=16.32;ReadPosRankSum=-5.500;SB=-136.96	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:144,0:144:99:0,433,6013	./.	./.	./.	./.	0/1:13,13:26:99:465,0,465	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	./.	0/0:157,0:157:99:0,473,6556	./.	./.	./.	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:162,0:162:99:0,488,6765	0/0:176,0:176:99:0,530,7350	0/0:194,0:194:99:0,584,8102	./.	./.
gi|293339394|gb|GU595196.1|	54853	.	C	T	262.72	.	AC=4;AF=0.154;AN=26;BaseQRankSum=-0.184;DP=1889;Dels=0.00;FS=21.129;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9644;MQ=254.00;MQ0=0;MQRankSum=-0.653;QD=32.84;ReadPosRankSum=-0.851;SB=-0.02	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	1/1:0,4:4:12.04:167,12,0	1/1:0,4:4:12.04:167,12,0	./.	./.	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	./.	0/0:187,0:187:99:0,563,7809	./.	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	./.	./.
gi|293339394|gb|GU595196.1|	54878	.	T	A	530.58	.	AC=8;AF=0.267;AN=30;BaseQRankSum=-1.392;DP=1811;Dels=0.00;FS=21.339;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9129;MQ=254.00;MQ0=0;MQRankSum=-0.308;QD=35.37;ReadPosRankSum=1.399;SB=-81.22	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:149,0:149:99:0,448,6222	1/1:0,6:6:18.06:251,18,0	1/1:0,5:5:15.05:209,15,0	./.	./.	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	./.	0/0:185,0:185:99:0,557,7726	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	./.	0/0:173,0:173:99:0,521,7225	0/0:149,0:149:99:0,448,6222	0/0:158,0:158:99:0,476,6598	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	./.	./.
gi|293339394|gb|GU595196.1|	54903	.	C	T	247.18	.	AC=8;AF=0.267;AN=30;BaseQRankSum=0.248;DP=1845;Dels=0.00;FS=7.560;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8450;MQ=254.00;MQ0=0;MQRankSum=0.946;QD=30.90;ReadPosRankSum=-0.401;SB=-79.19	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:167,0:167:99:0,503,6974	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	./.	./.	0/0:155,0:155:99:0,467,6473	0/0:167,0:167:99:0,503,6974	0/0:180,0:180:99:0,542,7517	./.	0/0:167,0:167:99:0,503,6974	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	./.	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	./.	./.
gi|293339394|gb|GU595196.1|	55109	.	A	G	720.30	.	AC=12;AF=0.353;AN=34;BaseQRankSum=-1.236;DP=1896;Dels=0.00;FS=33.543;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8966;MQ=254.00;MQ0=0;MQRankSum=-0.256;QD=36.02;ReadPosRankSum=0.580;SB=-81.02	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:182,0:182:99:0,548,7600	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:12.04:167,12,0	./.	./.	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:182,0:182:99:0,548,7600	1/1:0,2:2:6.02:84,6,0	0/0:166,0:166:99:0,500,6932	1/1:0,4:4:12.04:167,12,0	1/1:0,6:6:18.06:251,18,0	1/1:0,1:1:3.01:42,3,0	0/0:161,0:161:99:0,485,6723	0/0:170,0:170:99:0,512,7099	0/0:185,0:185:99:0,557,7726	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	./.	./.
gi|293339394|gb|GU595196.1|	55127	.	G	A	720.30	.	AC=12;AF=0.353;AN=34;BaseQRankSum=-0.099;DP=1851;Dels=0.00;FS=33.649;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8966;MQ=254.00;MQ0=0;MQRankSum=2.017;QD=36.02;ReadPosRankSum=3.809;SB=-81.02	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:174,0:174:99:0,524,7266	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:12.04:167,12,0	./.	./.	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:187,0:187:99:0,563,7809	1/1:0,2:2:6.02:84,6,0	0/0:177,0:177:99:0,533,7392	1/1:0,4:4:12.04:167,12,0	1/1:0,6:6:18.06:251,18,0	1/1:0,1:1:3.01:42,3,0	0/0:176,0:176:99:0,530,7350	0/0:160,0:160:99:0,482,6682	0/0:184,0:184:99:0,554,7684	0/0:160,0:160:99:0,482,6682	0/0:151,0:151:99:0,455,6306	./.	./.
gi|293339394|gb|GU595196.1|	55289	.	C	T	396.56	.	AC=12;AF=0.353;AN=34;BaseQRankSum=-0.406;DP=1926;Dels=0.00;FS=33.218;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=0.8125;MQ=254.00;MQ0=0;MQRankSum=0.071;QD=33.05;ReadPosRankSum=-1.242;SB=-0.02	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:189,0:189:99:0,569,7893	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	./.	./.	0/0:195,0:195:99:0,587,8143	0/0:194,0:194:99:0,584,8102	0/0:175,0:175:99:0,527,7308	1/1:0,1:1:3.01:42,3,0	0/0:161,0:161:99:0,485,6723	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	1/1:0,1:1:3.01:42,3,0	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:183,0:183:99:0,551,7642	./.	./.
gi|293339394|gb|GU595196.1|	55343	.	A	G	65.21	.	AC=4;AF=0.154;AN=26;BaseQRankSum=-0.276;DP=1901;Dels=0.00;FS=6.027;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8225;MQ=254.00;MQ0=0;MQRankSum=-0.123;QD=21.74;ReadPosRankSum=-2.228;SB=-0.02	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:194,0:194:99:0,584,8102	./.	1/1:0,1:1:3.01:42,3,0	./.	./.	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:184,0:184:99:0,554,7684	./.	0/0:171,0:171:99:0,515,7141	./.	1/1:0,2:2:6.02:84,6,0	./.	0/0:178,0:178:99:0,536,7433	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	0/0:151,0:151:99:0,455,6306	0/0:185,0:185:99:0,557,7726	./.	./.
gi|293339394|gb|GU595196.1|	55777	.	G	A	236.19	.	AC=12;AF=0.353;AN=34;BaseQRankSum=-0.351;DP=1823;Dels=0.00;FS=21.139;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.7581;MQ=254.00;MQ0=0;MQRankSum=-0.288;QD=29.52;ReadPosRankSum=1.543;SB=-0.02	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:158,0:158:99:0,476,6598	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	./.	0/0:161,0:161:99:0,485,6723	0/0:197,0:197:99:0,593,8227	0/0:158,0:158:99:0,476,6598	1/1:0,2:2:6.02:84,6,0	0/0:152,0:152:99:0,458,6348	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/0:188,0:188:99:0,566,7851	0/0:137,0:137:99:0,412,5721	0/0:159,0:159:99:0,479,6640	./.	./.
gi|293339394|gb|GU595196.1|	55786	.	G	A	201.71	.	AC=10;AF=0.313;AN=32;BaseQRankSum=-0.737;DP=1889;Dels=0.00;FS=18.109;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.7774;MQ=254.00;MQ0=0;MQRankSum=0.681;QD=28.82;ReadPosRankSum=-0.702;SB=-0.02	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:156,0:156:99:0,470,6515	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:196,0:196:99:0,590,8185	0/0:164,0:164:99:0,494,6849	1/1:0,2:2:6.02:84,6,0	0/0:158,0:158:99:0,476,6598	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0	0/0:172,0:172:99:0,518,7183	0/0:191,0:191:99:0,575,7976	0/0:197,0:197:99:0,593,8227	0/0:146,0:146:99:0,439,6097	0/0:173,0:173:99:0,521,7225	./.	./.
gi|293339394|gb|GU595196.1|	56011	.	A	C	281.14	.	AC=10;AF=0.313;AN=32;BaseQRankSum=-0.663;DP=1888;Dels=0.00;FS=1.239;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8157;MQ=254.00;MQ0=0;MQRankSum=-0.549;QD=31.24;ReadPosRankSum=-4.808;SB=-145.79	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:178,0:178:99:0,536,7433	1/1:0,1:1:3.01:42,3,0	./.	./.	./.	0/0:183,0:183:99:0,551,7642	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	1/1:0,3:3:9.03:125,9,0	0/0:201,0:201:99:0,605,8394	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	0/0:161,0:161:99:0,485,6723	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:158,0:158:99:0,476,6598	0/0:145,0:145:99:0,436,6055	./.	./.
gi|293339394|gb|GU595196.1|	56020	.	A	C	396.10	.	AC=12;AF=0.353;AN=34;BaseQRankSum=-0.292;DP=1883;Dels=0.00;FS=1.114;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8190;MQ=254.00;MQ0=0;MQRankSum=-1.431;QD=33.01;ReadPosRankSum=-1.466;SB=-194.41	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:186,0:186:99:0,560,7767	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	./.	0/0:193,0:193:99:0,581,8060	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	1/1:0,4:4:12.04:167,12,0	0/0:189,0:189:99:0,569,7893	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:159,0:159:99:0,479,6640	0/0:157,0:157:99:0,473,6556	0/0:148,0:148:99:0,445,6181	./.	./.
gi|293339394|gb|GU595196.1|	56062	.	G	A	162.23	.	AC=10;AF=0.313;AN=32;BaseQRankSum=-0.123;DP=1849;Dels=0.00;FS=1.586;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.7537;MQ=254.00;MQ0=0;MQRankSum=1.139;QD=27.04;ReadPosRankSum=-1.403;SB=-72.95	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:190,0:190:99:0,572,7934	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	./.	0/0:191,0:191:99:0,575,7976	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	1/1:0,1:1:3.01:42,3,0	0/0:176,0:176:99:0,530,7350	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	0/0:161,0:161:99:0,485,6723	0/0:150,0:150:99:0,452,6264	0/0:156,0:156:99:0,470,6515	0/0:157,0:157:99:0,473,6556	0/0:157,0:157:99:0,473,6556	./.	./.
gi|293339394|gb|GU595196.1|	56065	.	A	G	128.65	.	AC=8;AF=0.267;AN=30;BaseQRankSum=0.998;DP=1861;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.7718;MQ=254.00;MQ0=0;MQRankSum=0.795;QD=25.73;ReadPosRankSum=-1.633;SB=-71.75	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:186,0:186:99:0,560,7767	1/1:0,2:2:6.02:84,6,0	./.	./.	./.	0/0:198,0:198:99:0,596,8269	0/0:156,0:156:99:0,470,6515	0/0:176,0:176:99:0,530,7350	1/1:0,1:1:3.01:42,3,0	0/0:176,0:176:99:0,530,7350	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	0/0:167,0:167:99:0,503,6974	0/0:153,0:153:99:0,461,6389	0/0:154,0:154:99:0,464,6431	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	./.	./.
gi|293339394|gb|GU595196.1|	56167	.	C	T	207.39	.	AC=8;AF=0.267;AN=30;BaseQRankSum=0.939;DP=1803;Dels=0.00;FS=18.106;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8272;MQ=254.00;MQ0=0;MQRankSum=0.193;QD=29.63;ReadPosRankSum=1.163;SB=-0.02	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	1/1:0,2:2:6.02:84,6,0	./.	./.	./.	0/0:157,0:157:99:0,473,6556	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	1/1:0,2:2:6.02:84,6,0	0/0:183,0:183:99:0,551,7642	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	0/0:147,0:147:99:0,442,6139	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:153,0:153:99:0,461,6389	./.	./.
gi|293339394|gb|GU595196.1|	56170	.	C	T	207.39	.	AC=8;AF=0.267;AN=30;BaseQRankSum=1.174;DP=1828;Dels=0.00;FS=18.096;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8272;MQ=254.00;MQ0=0;MQRankSum=0.426;QD=29.63;ReadPosRankSum=0.121;SB=-0.02	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	1/1:0,2:2:6.02:84,6,0	./.	./.	./.	0/0:157,0:157:99:0,473,6556	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	1/1:0,2:2:6.02:84,6,0	0/0:181,0:181:99:0,545,7559	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	0/0:150,0:150:99:0,452,6264	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:154,0:154:99:0,464,6431	./.	./.
gi|293339394|gb|GU595196.1|	56396	.	G	A	2004.36	.	AC=14;AF=0.389;AN=36;BaseQRankSum=0.893;DP=1897;Dels=0.00;FS=148.304;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9052;MQ=254.00;MQ0=0;MQRankSum=0.139;QD=39.30;ReadPosRankSum=-5.229;SB=-0.02	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:161,0:161:99:0,485,6723	1/1:0,4:4:12.04:167,12,0	1/1:0,5:5:15.05:209,15,0	./.	./.	0/0:186,0:186:99:0,560,7767	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	1/1:0,3:3:9.03:125,9,0	0/0:175,0:175:99:0,527,7308	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	0/0:142,0:142:99:0,427,5930	0/0:177,0:177:99:0,533,7392	0/0:187,0:187:99:0,563,7809	0/0:136,0:136:99:0,409,5679	0/0:177,0:177:99:0,533,7392	./.	1/1:0,32:32:96.32:1336,96,0
gi|293339394|gb|GU595196.1|	56407	.	A	T	6639.91	.	AC=14;AF=0.389;AN=36;BaseQRankSum=-0.251;DP=1998;Dels=0.00;FS=450.050;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.397;QD=41.76;ReadPosRankSum=-5.477;SB=-0.02	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:142,0:142:99:0,427,5930	1/1:0,18:18:54.18:752,54,0	1/1:0,26:26:78.26:1086,78,0	./.	./.	0/0:186,0:186:99:0,560,7767	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	1/1:0,15:15:45.15:626,45,0	0/0:184,0:184:99:0,554,7684	1/1:0,14:14:42.14:585,42,0	1/1:0,17:17:51.17:710,51,0	1/1:0,23:23:69.23:960,69,0	0/0:149,0:149:99:0,448,6222	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:144,0:144:99:0,433,6013	0/0:160,0:160:99:0,482,6682	./.	1/1:0,46:46:99:1921,138,0
gi|293339394|gb|GU595196.1|	56466	.	C	A	2338.42	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.117;DP=2201;Dels=0.00;FS=51.391;HRun=0;HaplotypeScore=0.4444;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.921;QD=40.32;ReadPosRankSum=-5.513;SB=-290.09	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:188,0:188:99:0,566,7851	0/0:48,0:48:99:0,144,2004	0/0:79,0:79:99:0,238,3299	./.	./.	1/1:0,12:12:36.12:501,36,0	0/0:181,0:181:99:0,545,7559	0/0:185,0:185:99:0,557,7726	0/0:76,0:76:99:0,229,3174	0/0:180,0:180:99:0,542,7517	0/0:83,0:83:99:0,250,3466	0/0:77,0:77:99:0,232,3216	0/0:85,0:85:99:0,256,3550	0/0:176,0:176:99:0,530,7350	0/0:159,0:159:99:0,479,6640	0/0:153,0:153:99:0,461,6389	0/0:145,0:145:99:0,436,6055	0/0:169,0:169:99:0,509,7057	./.	1/1:0,46:46:99:1921,138,0
gi|293339394|gb|GU595196.1|	56467	.	G	A	274.15	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.108;DP=2201;Dels=0.00;FS=5.601;HRun=1;HaplotypeScore=0.4444;InbreedingCoeff=0.9979;MQ=254.00;MQ0=0;MQRankSum=0.319;QD=34.27;ReadPosRankSum=-4.553;SB=-118.35	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:186,0:186:99:0,560,7767	0/0:49,0:49:99:0,147,2046	0/0:78,0:78:99:0,235,3257	./.	./.	1/1:0,8:8:24.08:334,24,0	0/0:187,0:187:99:0,563,7809	0/0:187,0:187:99:0,563,7809	0/0:77,0:77:99:0,232,3216	0/0:180,0:180:99:0,542,7517	0/0:80,0:80:99:0,241,3341	0/0:81,0:81:99:0,244,3383	0/0:86,0:86:99:0,259,3591	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:151,0:151:99:0,455,6306	0/0:146,0:146:99:0,439,6097	0/0:163,0:163:99:0,491,6807	./.	0/0:45,0:45:99:0,135,1879
gi|293339394|gb|GU595196.1|	56475	.	T	G	857.74	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.285;DP=2218;Dels=0.00;FS=0.808;HRun=0;HaplotypeScore=1.2221;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.666;QD=38.99;ReadPosRankSum=-6.153;SB=-375.82	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:196,0:196:99:0,590,8185	0/0:54,0:54:99:0,163,2255	0/0:88,0:88:99:0,265,3675	./.	./.	1/1:0,22:22:66.22:919,66,0	0/0:184,0:184:99:0,554,7684	0/0:192,0:192:99:0,578,8018	0/0:77,0:77:99:0,232,3216	0/0:176,0:176:99:0,530,7350	0/0:77,0:77:99:0,232,3216	0/0:79,0:79:99:0,238,3299	0/0:90,0:90:99:0,271,3758	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:153,0:153:99:0,461,6389	0/0:148,0:148:99:0,445,6181	0/0:175,0:175:99:0,527,7308	./.	0/0:20,0:20:60.20:0,60,835
gi|293339394|gb|GU595196.1|	56481	.	C	A	274.15	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.057;DP=2250;Dels=0.00;FS=16.000;HRun=0;HaplotypeScore=0.4444;InbreedingCoeff=0.9979;MQ=254.00;MQ0=0;MQRankSum=-1.038;QD=34.27;ReadPosRankSum=-4.268;SB=-0.02	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:204,0:204:99:0,614,8519	0/0:60,0:60:99:0,181,2506	0/0:91,0:91:99:0,274,3800	./.	./.	0/0:54,0:54:99:0,163,2255	0/0:185,0:185:99:0,557,7726	0/0:188,0:188:99:0,566,7851	0/0:83,0:83:99:0,250,3466	0/0:176,0:176:99:0,530,7350	0/0:79,0:79:99:0,238,3299	0/0:79,0:79:99:0,238,3299	0/0:94,0:94:99:0,283,3925	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:157,0:157:99:0,473,6556	0/0:143,0:143:99:0,430,5972	0/0:170,0:170:99:0,512,7099	./.	1/1:0,8:8:24.08:334,24,0
gi|293339394|gb|GU595196.1|	56493	.	G	T	4593.66	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.096;DP=2281;Dels=0.00;FS=17.934;HRun=0;HaplotypeScore=0.5555;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-2.330;QD=41.76;ReadPosRankSum=-0.928;SB=-2250.72	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	0/0:55,0:55:99:0,166,2297	0/0:92,0:92:99:0,277,3842	./.	./.	1/1:0,110:110:99:4594,331,0	0/0:174,0:174:99:0,524,7266	0/0:179,0:179:99:0,539,7475	0/0:83,0:83:99:0,250,3466	0/0:169,0:169:99:0,509,7057	0/0:86,0:86:99:0,259,3591	0/0:81,0:81:99:0,244,3383	0/0:92,0:92:99:0,277,3842	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	0/0:148,0:148:99:0,445,6181	0/0:162,0:162:99:0,488,6765	./.	0/0:10,0:10:30.10:0,30,418
gi|293339394|gb|GU595196.1|	56503	.	C	A	356.91	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.688;DP=2294;Dels=0.00;FS=20.680;HRun=0;HaplotypeScore=0.5555;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-0.332;QD=35.69;ReadPosRankSum=0.470;SB=-0.02	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:170,0:170:99:0,512,7099	0/0:61,0:61:99:0,184,2547	0/0:93,0:93:99:0,280,3884	./.	./.	0/0:145,0:145:99:0,436,6055	0/0:165,0:165:99:0,497,6890	0/0:183,0:183:99:0,551,7642	0/0:86,0:86:99:0,259,3591	0/0:168,0:168:99:0,506,7016	0/0:82,0:82:99:0,247,3424	0/0:79,0:79:99:0,238,3299	0/0:96,0:96:99:0,289,4009	0/0:167,0:167:99:0,503,6974	0/0:154,0:154:99:0,464,6431	0/0:176,0:176:99:0,530,7350	0/0:153,0:153:99:0,461,6389	0/0:150,0:150:99:0,452,6264	./.	1/1:0,10:10:30.10:418,30,0
gi|293339394|gb|GU595196.1|	56523	.	G	A	356.91	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.492;DP=2180;Dels=0.00;FS=21.222;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-1.345;QD=35.69;ReadPosRankSum=1.443;SB=-0.02	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:161,0:161:99:0,485,6723	0/0:64,0:64:99:0,193,2673	0/0:72,0:72:99:0,217,3007	./.	./.	0/0:203,0:203:99:0,611,8477	0/0:150,0:150:99:0,452,6264	0/0:172,0:172:99:0,518,7183	0/0:65,0:65:99:0,196,2714	0/0:173,0:173:99:0,521,7225	0/0:67,0:67:99:0,202,2798	0/0:52,0:52:99:0,157,2172	0/0:54,0:54:99:0,163,2255	0/0:150,0:150:99:0,452,6264	0/0:160,0:160:99:0,482,6682	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:154,0:154:99:0,464,6431	./.	1/1:0,10:10:30.10:418,30,0
gi|293339394|gb|GU595196.1|	56535	.	G	T	7600.40	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.478;DP=2111;Dels=0.00;FS=13.011;HRun=0;HaplotypeScore=5.7770;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=1.129;QD=41.76;ReadPosRankSum=-0.310;SB=-3758.45	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:164,0:164:99:0,494,6849	0/0:65,0:65:99:0,196,2714	0/0:74,0:74:99:0,223,3090	./.	./.	1/1:0,182:182:99:7600,548,0	0/0:142,0:142:99:0,427,5930	0/0:183,0:183:99:0,551,7642	0/0:40,0:40:99:0,120,1670	0/0:169,0:169:99:0,509,7057	0/0:42,0:42:99:0,126,1754	0/0:32,0:32:96.32:0,96,1336	0/0:37,0:37:99:0,111,1545	0/0:157,0:157:99:0,473,6556	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:153,0:153:99:0,461,6389	./.	0/0:10,0:10:30.10:0,30,418
gi|293339394|gb|GU595196.1|	56541	.	G	C	4343.09	.	AC=8;AF=0.235;AN=34;BaseQRankSum=-0.656;DP=2064;Dels=0.00;FS=249.958;HRun=1;HaplotypeScore=10.2339;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.631;QD=41.76;ReadPosRankSum=-4.749;SB=-41.78	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:177,0:177:99:0,533,7392	0/0:68,0:68:99:0,205,2840	0/0:75,0:75:99:0,226,3132	./.	./.	0/0:176,0:176:99:0,530,7350	0/0:134,0:134:99:0,403,5596	0/0:184,0:184:99:0,554,7684	1/1:0,22:22:66.22:919,66,0	0/0:171,0:171:99:0,515,7141	1/1:0,29:29:87.29:1211,87,0	1/1:0,25:25:75.25:1044,75,0	1/1:0,28:28:84.28:1169,84,0	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:159,0:159:99:0,479,6640	0/0:177,0:177:99:0,533,7392	0/0:153,0:153:99:0,461,6389	./.	./.
gi|293339394|gb|GU595196.1|	56547	.	C	T	2811.63	.	AC=8;AF=0.235;AN=34;BaseQRankSum=2.377;DP=2030;Dels=0.00;FS=166.899;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.726;QD=40.17;ReadPosRankSum=-7.770;SB=-41.78	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:163,0:163:99:0,491,6807	0/0:68,0:68:99:0,205,2840	0/0:81,0:81:99:0,244,3383	./.	./.	0/0:176,0:176:99:0,530,7350	0/0:146,0:146:99:0,439,6097	0/0:186,0:186:99:0,560,7767	1/1:0,13:13:39.13:543,39,0	0/0:164,0:164:99:0,494,6849	1/1:0,19:19:57.19:793,57,0	1/1:0,17:17:51.17:710,51,0	1/1:0,21:21:63.21:877,63,0	0/0:158,0:158:99:0,476,6598	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:151,0:151:99:0,455,6306	./.	./.
gi|293339394|gb|GU595196.1|	56559	.	T	C,G	12402.84	.	AC=10,4;AF=0.278,0.111;AN=36;BaseQRankSum=-0.285;DP=2158;Dels=0.00;FS=158.092;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.340;QD=41.76;ReadPosRankSum=-7.730;SB=-1506.02	GT:AD:DP:GQ:PL	0/0:154,0,0:154:99:0,464,6431,464,6431,6431	0/0:157,0,0:157:99:0,473,6556,473,6556,6556	2/2:0,0,65:65:99:2714,2714,2714,196,196,0	2/2:0,0,85:85:99:3550,3550,3550,256,256,0	./.	./.	0/0:190,0,0:190:99:0,572,7934,572,7934,7934	0/0:146,0,0:146:99:0,439,6097,439,6097,6097	0/0:188,0,0:188:99:0,566,7851,566,7851,7851	1/1:0,30,0:30:90.30:1253,90,0,1253,90,1253	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	1/1:0,24,0:24:72.24:1002,72,0,1002,72,1002	1/1:0,27,0:27:81.27:1128,81,0,1128,81,1128	1/1:0,30,0:30:90.30:1253,90,0,1253,90,1253	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:195,0,0:195:99:0,587,8143,587,8143,8143	0/0:155,0,0:155:99:0,467,6473,467,6473,6473	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	./.	1/1:0,36,0:36:99:1503,108,0,1503,108,1503
gi|293339394|gb|GU595196.1|	56583	.	C	T	18374.57	.	AC=10;AF=0.278;AN=36;BaseQRankSum=0.667;DP=2471;Dels=0.00;FS=266.634;HRun=0;HaplotypeScore=9.7765;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.309;QD=41.76;ReadPosRankSum=5.424;SB=-3758.45	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:154,0:154:99:0,464,6431	0/0:82,0:82:99:0,247,3424	0/0:107,0:107:99:0,322,4468	./.	./.	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	0/0:195,0:195:99:0,587,8143	1/1:0,79:79:99:3299,238,0	0/0:178,0:178:99:0,536,7433	1/1:0,75:75:99:3132,226,0	1/1:0,88:88:99:3675,265,0	1/1:0,95:95:99:3967,286,0	0/0:177,0:177:99:0,533,7392	0/0:174,0:174:99:0,524,7266	0/0:154,0:154:99:0,464,6431	0/0:150,0:150:99:0,452,6264	0/0:170,0:170:99:0,512,7099	./.	1/1:0,103:103:99:4301,310,0
gi|293339394|gb|GU595196.1|	56589	.	C	T	8519.13	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.632;DP=2534;Dels=0.00;FS=65.927;HRun=0;HaplotypeScore=11.3318;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.197;QD=41.76;ReadPosRankSum=-0.294;SB=-2129.80	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:149,0:149:99:0,448,6222	1/1:0,88:88:99:3675,265,0	1/1:0,116:116:99:4844,349,0	./.	./.	0/0:161,0:161:99:0,485,6723	0/0:164,0:164:99:0,494,6849	0/0:184,0:184:99:0,554,7684	0/0:97,0:97:99:0,292,4051	0/0:175,0:175:99:0,527,7308	0/0:92,0:92:99:0,277,3842	0/0:103,0:103:99:0,310,4301	0/0:105,0:105:99:0,316,4385	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:155,0:155:99:0,467,6473	0/0:156,0:156:99:0,470,6515	0/0:168,0:168:99:0,506,7016	./.	0/0:118,0:118:99:0,355,4928
gi|293339394|gb|GU595196.1|	56721	.	T	C	25557.34	.	AC=8;AF=0.222;AN=36;BaseQRankSum=0.563;DP=2861;Dels=0.00;FS=23.366;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.599;QD=41.76;ReadPosRankSum=0.307;SB=-10690.66	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:170,0:170:99:0,512,7099	0/0:141,0:141:99:0,424,5888	0/0:160,0:160:99:0,482,6682	./.	./.	0/0:154,0:154:99:0,464,6431	0/0:155,0:155:99:0,467,6473	0/0:175,0:175:99:0,527,7308	1/1:0,144:144:99:6013,433,0	0/0:178,0:178:99:0,536,7433	1/1:0,161:161:99:6723,485,0	1/1:0,158:158:99:6598,476,0	1/1:0,149:149:99:6222,448,0	0/0:172,0:172:99:0,518,7183	0/0:161,0:161:99:0,485,6723	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:153,0:153:99:0,461,6389	./.	0/0:139,0:139:99:0,418,5805
gi|293339394|gb|GU595196.1|	56814	.	G	A	27603.60	.	AC=8;AF=0.222;AN=36;BaseQRankSum=-0.906;DP=2958;Dels=0.00;FS=4.231;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.707;QD=41.76;ReadPosRankSum=0.073;SB=-13697.41	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:173,0:173:99:0,521,7225	0/0:122,0:122:99:0,367,5095	0/0:172,0:172:99:0,518,7183	./.	./.	0/0:176,0:176:99:0,530,7350	0/0:148,0:148:99:0,445,6181	0/0:193,0:193:99:0,581,8060	1/1:0,179:179:99:7475,539,0	0/0:171,0:171:99:0,515,7141	1/1:0,154:154:99:6431,464,0	1/1:0,175:175:99:7308,527,0	1/1:0,153:153:99:6389,461,0	0/0:179,0:179:99:0,539,7475	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:154,0:154:99:0,464,6431	0/0:154,0:154:99:0,464,6431	./.	0/0:175,0:175:99:0,527,7308
gi|293339394|gb|GU595196.1|	56856	.	A	G	7516.88	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.880;DP=3009;Dels=0.00;FS=1.905;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.876;QD=41.76;ReadPosRankSum=0.165;SB=-3591.41	GT:AD:DP:GQ:PL	0/0:136,0:136:99:0,409,5679	0/0:190,0:190:99:0,572,7934	0/0:123,0:123:99:0,370,5137	0/0:136,0:136:99:0,409,5679	./.	./.	0/0:194,0:194:99:0,584,8102	0/0:162,0:162:99:0,488,6765	0/0:187,0:187:99:0,563,7809	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:144,0:144:99:0,433,6013	0/0:183,0:183:99:0,551,7642	0/0:163,0:163:99:0,491,6807	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:183,0:183:99:0,551,7642	./.	1/1:0,180:180:99:7517,542,0
gi|293339394|gb|GU595196.1|	56889	.	A	G	35830.38	.	AC=10;AF=0.278;AN=36;BaseQRankSum=-1.347;DP=2994;Dels=0.00;FS=12.013;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.249;QD=41.76;ReadPosRankSum=0.930;SB=-16453.59	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:120,0:120:99:0,361,5011	0/0:149,0:149:99:0,448,6222	./.	./.	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	1/1:0,157:157:99:6556,473,0	0/0:156,0:156:99:0,470,6515	1/1:0,180:180:99:7517,542,0	1/1:0,154:154:99:6431,464,0	1/1:0,172:172:99:7183,518,0	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:157,0:157:99:0,473,6556	0/0:191,0:191:99:0,575,7976	./.	1/1:0,195:195:99:8143,587,0
gi|293339394|gb|GU595196.1|	56931	.	T	C	36247.99	.	AC=10;AF=0.278;AN=36;BaseQRankSum=-0.626;DP=2973;Dels=0.00;FS=9.025;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.067;QD=41.76;ReadPosRankSum=0.585;SB=-16829.43	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:184,0:184:99:0,554,7684	0/0:137,0:137:99:0,412,5721	0/0:158,0:158:99:0,476,6598	./.	./.	0/0:175,0:175:99:0,527,7308	0/0:145,0:145:99:0,436,6055	0/0:157,0:157:99:0,473,6556	1/1:0,164:164:99:6849,494,0	0/0:168,0:168:99:0,506,7016	1/1:0,184:184:99:7684,554,0	1/1:0,159:159:99:6640,479,0	1/1:0,170:170:99:7099,512,0	0/0:191,0:191:99:0,575,7976	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:159,0:159:99:0,479,6640	0/0:155,0:155:99:0,467,6473	./.	1/1:0,191:191:99:7976,575,0
gi|293339394|gb|GU595196.1|	57006	.	C	T	12152.28	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.711;DP=3007;Dels=0.00;FS=15.812;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.377;QD=41.76;ReadPosRankSum=-2.006;SB=-5387.10	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	1/1:0,116:116:99:4844,349,0	1/1:0,175:175:99:7308,527,0	./.	./.	0/0:173,0:173:99:0,521,7225	0/0:206,0:206:99:0,620,8603	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:195,0:195:99:0,587,8143	0/0:161,0:161:99:0,485,6723	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	0/0:148,0:148:99:0,445,6181	0/0:178,0:178:99:0,536,7433	./.	0/0:159,0:159:99:0,479,6640
gi|293339394|gb|GU595196.1|	57024	.	C	G	6055.27	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.489;DP=3042;Dels=0.00;FS=34.937;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.641;QD=41.76;ReadPosRankSum=0.014;SB=-2046.28	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:117,0:117:99:0,352,4886	0/0:186,0:186:99:0,560,7767	./.	./.	0/0:165,0:165:99:0,497,6890	0/0:209,0:209:99:0,629,8728	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:199,0:199:99:0,599,8310	0/0:170,0:170:99:0,512,7099	0/0:180,0:180:99:0,542,7517	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	0/0:135,0:135:99:0,406,5638	0/0:174,0:174:99:0,524,7266	./.	1/1:0,145:145:99:6055,436,0
gi|293339394|gb|GU595196.1|	57045	.	T	G	31320.27	.	AC=10;AF=0.278;AN=36;BaseQRankSum=0.833;DP=2920;Dels=0.00;FS=3.266;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.253;QD=41.76;ReadPosRankSum=4.176;SB=-14824.94	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:179,0:179:99:0,539,7475	0/0:127,0:127:99:0,382,5304	0/0:195,0:195:99:0,587,8143	./.	./.	0/0:172,0:172:99:0,518,7183	0/0:186,0:186:99:0,560,7767	0/0:177,0:177:99:0,533,7392	1/1:0,159:159:99:6640,479,0	0/0:167,0:167:99:0,503,6974	1/1:0,141:141:99:5888,424,0	1/1:0,166:166:99:6932,500,0	1/1:0,126:126:99:5262,379,0	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	0/0:164,0:164:99:0,494,6849	0/0:145,0:145:99:0,436,6055	0/0:168,0:168:99:0,506,7016	./.	1/1:0,158:158:99:6598,476,0
gi|293339394|gb|GU595196.1|	57057	.	C	T	23803.41	.	AC=8;AF=0.222;AN=36;BaseQRankSum=-0.712;DP=2901;Dels=0.00;FS=1.496;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.547;QD=41.76;ReadPosRankSum=-2.380;SB=-11818.19	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:191,0:191:99:0,575,7976	0/0:125,0:125:99:0,376,5220	0/0:182,0:182:99:0,548,7600	./.	./.	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:178,0:178:99:0,536,7433	1/1:0,152:152:99:6348,458,0	0/0:179,0:179:99:0,539,7475	1/1:0,142:142:99:5930,427,0	1/1:0,155:155:99:6473,467,0	1/1:0,121:121:99:5053,364,0	0/0:176,0:176:99:0,530,7350	0/0:147,0:147:99:0,442,6139	0/0:158,0:158:99:0,476,6598	0/0:152,0:152:99:0,458,6348	0/0:175,0:175:99:0,527,7308	./.	0/0:159,0:159:99:0,479,6640
gi|293339394|gb|GU595196.1|	57085	.	G	A	29566.33	.	AC=10;AF=0.278;AN=36;BaseQRankSum=0.793;DP=2836;Dels=0.00;FS=5.261;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.337;QD=41.76;ReadPosRankSum=4.812;SB=-14031.49	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:193,0:193:99:0,581,8060	0/0:128,0:128:99:0,385,5345	0/0:158,0:158:99:0,476,6598	./.	./.	0/0:180,0:180:99:0,542,7517	0/0:151,0:151:99:0,455,6306	0/0:153,0:153:99:0,461,6389	1/1:0,143:143:99:5972,430,0	0/0:182,0:182:99:0,548,7600	1/1:0,158:158:99:6598,476,0	1/1:0,134:134:99:5596,403,0	1/1:0,118:118:99:4928,355,0	0/0:169,0:169:99:0,509,7057	0/0:149,0:149:99:0,448,6222	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:151,0:151:99:0,455,6306	./.	1/1:0,155:155:99:6473,467,0
gi|293339394|gb|GU595196.1|	57147	.	T	C	27645.36	.	AC=8;AF=0.222;AN=36;BaseQRankSum=0.966;DP=2938;Dels=0.00;FS=19.254;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.551;QD=41.76;ReadPosRankSum=-0.786;SB=-12820.44	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:176,0:176:99:0,530,7350	0/0:127,0:127:99:0,382,5304	0/0:174,0:174:99:0,524,7266	./.	./.	0/0:172,0:172:99:0,518,7183	0/0:153,0:153:99:0,461,6389	0/0:162,0:162:99:0,488,6765	1/1:0,147:147:99:6139,442,0	0/0:169,0:169:99:0,509,7057	1/1:0,157:157:99:6556,473,0	1/1:0,188:188:99:7851,566,0	1/1:0,170:170:99:7099,512,0	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	0/0:150,0:150:99:0,452,6264	0/0:160,0:160:99:0,482,6682	0/0:189,0:189:99:0,569,7893	./.	0/0:158,0:158:99:0,476,6598
gi|293339394|gb|GU595196.1|	57168	.	A	T	3382.61	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.726;DP=2799;Dels=0.00;FS=5.869;HRun=1;HaplotypeScore=4.4994;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.147;QD=41.76;ReadPosRankSum=-0.829;SB=-1378.11	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:177,0:177:99:0,533,7392	0/0:125,0:125:99:0,376,5220	0/0:170,0:170:99:0,512,7099	./.	./.	0/0:156,0:156:99:0,470,6515	0/0:159,0:159:99:0,479,6640	0/0:145,0:145:99:0,436,6055	0/0:149,0:149:99:0,448,6222	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:151,0:151:99:0,455,6306	0/0:142,0:142:99:0,427,5930	0/0:161,0:161:99:0,485,6723	0/0:172,0:172:99:0,518,7183	./.	1/1:0,81:81:99:3383,244,0
gi|293339394|gb|GU595196.1|	57177	.	A	G	27979.44	.	AC=8;AF=0.222;AN=36;BaseQRankSum=-0.470;DP=2783;Dels=0.00;FS=3.989;HRun=0;HaplotypeScore=4.3883;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.650;QD=41.76;ReadPosRankSum=1.283;SB=-13739.17	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:124,0:124:99:0,373,5178	0/0:167,0:167:99:0,503,6974	./.	./.	0/0:157,0:157:99:0,473,6556	0/0:165,0:165:99:0,497,6890	0/0:153,0:153:99:0,461,6389	1/1:0,150:150:99:6264,452,0	0/0:159,0:159:99:0,479,6640	1/1:0,158:158:99:6598,476,0	1/1:0,175:175:99:7308,527,0	1/1:0,187:187:99:7809,563,0	0/0:176,0:176:99:0,530,7350	0/0:157,0:157:99:0,473,6556	0/0:155,0:155:99:0,467,6473	0/0:156,0:156:99:0,470,6515	0/0:168,0:168:99:0,506,7016	./.	0/0:50,0:50:99:0,151,2088
gi|293339394|gb|GU595196.1|	57183	.	T	C	1150.06	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.988;DP=2772;Dels=0.00;FS=4.538;HRun=1;HaplotypeScore=1.6109;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.726;QD=39.66;ReadPosRankSum=-6.410;SB=-459.38	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:155,0:155:99:0,467,6473	0/0:127,0:127:99:0,382,5304	0/0:174,0:174:99:0,524,7266	./.	./.	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:154,0:154:99:0,464,6431	0/0:159,0:159:99:0,479,6640	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:186,0:186:99:0,560,7767	0/0:159,0:159:99:0,479,6640	0/0:161,0:161:99:0,485,6723	0/0:145,0:145:99:0,436,6055	0/0:166,0:166:99:0,500,6932	./.	1/1:0,29:29:87.29:1211,87,0
gi|293339394|gb|GU595196.1|	57192	.	G	C	1734.71	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.654;DP=2794;Dels=0.00;FS=2.683;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.080;QD=40.34;ReadPosRankSum=-7.822;SB=-835.23	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:153,0:153:99:0,461,6389	0/0:121,0:121:99:0,364,5053	0/0:178,0:178:99:0,536,7433	./.	./.	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	0/0:148,0:148:99:0,445,6181	0/0:160,0:160:99:0,482,6682	0/0:167,0:167:99:0,503,6974	0/0:177,0:177:99:0,533,7392	0/0:174,0:174:99:0,524,7266	0/0:185,0:185:99:0,557,7726	0/0:178,0:178:99:0,536,7433	0/0:154,0:154:99:0,464,6431	0/0:167,0:167:99:0,503,6974	0/0:141,0:141:99:0,424,5888	0/0:174,0:174:99:0,524,7266	./.	1/1:0,43:43:99:1796,129,0
gi|293339394|gb|GU595196.1|	57201	.	C	T	3154.56	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.481;DP=2828;Dels=0.00;FS=3.104;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.549;QD=40.97;ReadPosRankSum=-3.867;SB=-1419.87	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:165,0:165:99:0,497,6890	0/0:130,0:130:99:0,391,5429	0/0:180,0:180:99:0,542,7517	./.	./.	0/0:157,0:157:99:0,473,6556	0/0:175,0:175:99:0,527,7308	0/0:141,0:141:99:0,424,5888	0/0:152,0:152:99:0,458,6348	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:134,0:134:99:0,403,5596	0/0:184,0:184:99:0,554,7684	./.	1/1:0,77:77:99:3216,232,0
gi|293339394|gb|GU595196.1|	57261	.	T	A	2695.20	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.265;DP=2889;Dels=0.00;FS=5.812;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.204;QD=40.84;ReadPosRankSum=-6.645;SB=-1169.31	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:185,0:185:99:0,557,7726	0/0:137,0:137:99:0,412,5721	0/0:174,0:174:99:0,524,7266	./.	./.	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:126,0:126:99:0,379,5262	0/0:188,0:188:99:0,566,7851	0/0:172,0:172:99:0,518,7183	0/0:185,0:185:99:0,557,7726	0/0:181,0:181:99:0,545,7559	0/0:150,0:150:99:0,452,6264	0/0:163,0:163:99:0,491,6807	0/0:175,0:175:99:0,527,7308	0/0:146,0:146:99:0,439,6097	0/0:175,0:175:99:0,527,7308	0/0:177,0:177:99:0,533,7392	./.	1/1:0,66:66:99:2756,199,0
gi|293339394|gb|GU595196.1|	57270	.	A	T	899.50	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.240;DP=2882;Dels=0.00;FS=1.696;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.068;QD=39.11;ReadPosRankSum=-6.889;SB=-417.59	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:177,0:177:99:0,533,7392	0/0:143,0:143:99:0,430,5972	0/0:183,0:183:99:0,551,7642	./.	./.	0/0:166,0:166:99:0,500,6932	0/0:147,0:147:99:0,442,6139	0/0:130,0:130:99:0,391,5429	0/0:196,0:196:99:0,590,8185	0/0:170,0:170:99:0,512,7099	0/0:182,0:182:99:0,548,7600	0/0:195,0:195:99:0,587,8143	0/0:154,0:154:99:0,464,6431	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	./.	1/1:0,23:23:69.23:960,69,0
gi|293339394|gb|GU595196.1|	57276	.	A	G	1108.30	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.840;DP=2881;Dels=0.00;FS=1.504;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.328;QD=39.58;ReadPosRankSum=-6.799;SB=-542.89	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:130,0:130:99:0,391,5429	0/0:172,0:172:99:0,518,7183	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:153,0:153:99:0,461,6389	0/0:145,0:145:99:0,436,6055	0/0:192,0:192:99:0,578,8018	0/0:181,0:181:99:0,545,7559	0/0:173,0:173:99:0,521,7225	0/0:188,0:188:99:0,566,7851	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	./.	1/1:0,28:28:84.28:1169,84,0
gi|293339394|gb|GU595196.1|	57305	.	A	C	34285.25	.	AC=10;AF=0.278;AN=36;BaseQRankSum=-1.290;DP=2935;Dels=0.00;FS=1.863;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.179;QD=41.76;ReadPosRankSum=2.958;SB=-16912.95	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:157,0:157:99:0,473,6556	0/0:116,0:116:99:0,349,4844	0/0:173,0:173:99:0,521,7225	./.	./.	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:186,0:186:99:0,560,7767	1/1:0,179:179:99:7475,539,0	0/0:159,0:159:99:0,479,6640	1/1:0,159:159:99:6640,479,0	1/1:0,175:175:99:7308,527,0	1/1:0,166:166:99:6932,500,0	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:146,0:146:99:0,439,6097	0/0:177,0:177:99:0,533,7392	./.	1/1:0,142:142:99:5930,427,0
gi|293339394|gb|GU595196.1|	57324	.	A	T	28146.48	.	AC=8;AF=0.222;AN=36;BaseQRankSum=-0.862;DP=2961;Dels=0.00;FS=0.651;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.026;QD=41.76;ReadPosRankSum=-0.237;SB=-14031.49	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:151,0:151:99:0,455,6306	0/0:112,0:112:99:0,337,4677	0/0:168,0:168:99:0,506,7016	./.	./.	0/0:189,0:189:99:0,569,7893	0/0:164,0:164:99:0,494,6849	0/0:184,0:184:99:0,554,7684	1/1:0,165:165:99:6890,497,0	0/0:166,0:166:99:0,500,6932	1/1:0,170:170:99:7099,512,0	1/1:0,168:168:99:7016,506,0	1/1:0,171:171:99:7141,515,0	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:157,0:157:99:0,473,6556	0/0:148,0:148:99:0,445,6181	0/0:158,0:158:99:0,476,6598	./.	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	57336	.	G	A	6890.47	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.665;DP=2979;Dels=0.00;FS=1.617;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.476;QD=41.76;ReadPosRankSum=-0.843;SB=-3340.85	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:149,0:149:99:0,448,6222	0/0:127,0:127:99:0,382,5304	0/0:176,0:176:99:0,530,7350	./.	./.	0/0:193,0:193:99:0,581,8060	0/0:149,0:149:99:0,448,6222	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	0/0:157,0:157:99:0,473,6556	0/0:166,0:166:99:0,500,6932	./.	1/1:0,165:165:99:6890,497,0
gi|293339394|gb|GU595196.1|	57443	.	G	A	26559.59	.	AC=8;AF=0.222;AN=36;BaseQRankSum=0.619;DP=2855;Dels=0.00;FS=5.215;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.349;QD=41.76;ReadPosRankSum=-1.558;SB=-12903.96	GT:AD:DP:GQ:PL	0/0:145,0:145:99:0,436,6055	0/0:192,0:192:99:0,578,8018	0/0:131,0:131:99:0,394,5471	0/0:166,0:166:99:0,500,6932	./.	./.	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:150,0:150:99:0,452,6264	1/1:0,178:178:99:7433,536,0	0/0:171,0:171:99:0,515,7141	1/1:0,159:159:99:6640,479,0	1/1:0,147:147:99:6139,442,0	1/1:0,152:152:99:6348,458,0	0/0:156,0:156:99:0,470,6515	0/0:181,0:181:99:0,545,7559	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:133,0:133:99:0,400,5554	./.	0/0:141,0:141:99:0,424,5888
gi|293339394|gb|GU595196.1|	57500	.	C	T	6556.39	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.220;DP=2959;Dels=0.00;FS=32.689;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.663;QD=41.76;ReadPosRankSum=-0.935;SB=-2338.60	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	0/0:130,0:130:99:0,391,5429	0/0:187,0:187:99:0,563,7809	./.	./.	0/0:172,0:172:99:0,518,7183	0/0:149,0:149:99:0,448,6222	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:156,0:156:99:0,470,6515	0/0:155,0:155:99:0,467,6473	0/0:156,0:156:99:0,470,6515	0/0:183,0:183:99:0,551,7642	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	0/0:175,0:175:99:0,527,7308	0/0:155,0:155:99:0,467,6473	./.	1/1:0,157:157:99:6556,473,0
gi|293339394|gb|GU595196.1|	57575	.	G	A	26643.11	.	AC=8;AF=0.222;AN=36;BaseQRankSum=0.498;DP=2898;Dels=0.00;FS=7.473;HRun=1;HaplotypeScore=14.5536;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.011;QD=41.76;ReadPosRankSum=0.283;SB=-12528.12	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:161,0:161:99:0,485,6723	0/0:123,0:123:99:0,370,5137	0/0:158,0:158:99:0,476,6598	./.	./.	0/0:173,0:173:99:0,521,7225	0/0:152,0:152:99:0,458,6348	0/0:170,0:170:99:0,512,7099	1/1:0,164:164:99:6849,494,0	0/0:148,0:148:99:0,445,6181	1/1:0,168:168:99:7016,506,0	1/1:0,149:149:99:6222,448,0	1/1:0,157:157:99:6556,473,0	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:162,0:162:99:0,488,6765	0/0:157,0:157:99:0,473,6556	./.	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	57578	.	G	A	11692.91	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.275;DP=2917;Dels=0.00;FS=5.021;HRun=1;HaplotypeScore=15.5535;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.002;QD=41.76;ReadPosRankSum=0.911;SB=-5387.10	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:168,0:168:99:0,506,7016	1/1:0,119:119:99:4969,358,0	1/1:0,161:161:99:6723,485,0	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:153,0:153:99:0,461,6389	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:153,0:153:99:0,461,6389	0/0:168,0:168:99:0,506,7016	0/0:151,0:151:99:0,455,6306	0/0:158,0:158:99:0,476,6598	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:161,0:161:99:0,485,6723	./.	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	57621	.	A	G	7308.08	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.580;DP=3035;Dels=0.00;FS=6.143;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.196;QD=41.76;ReadPosRankSum=0.542;SB=-3382.61	GT:AD:DP:GQ:PL	0/0:140,0:140:99:0,421,5846	0/0:175,0:175:99:0,527,7308	0/0:110,0:110:99:0,331,4594	0/0:156,0:156:99:0,470,6515	./.	./.	0/0:183,0:183:99:0,551,7642	0/0:182,0:182:99:0,548,7600	0/0:163,0:163:99:0,491,6807	0/0:181,0:181:99:0,545,7559	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:188,0:188:99:0,566,7851	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:182,0:182:99:0,548,7600	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	./.	1/1:0,175:175:99:7308,527,0
gi|293339394|gb|GU595196.1|	57667	.	G	A	23761.65	.	AC=10;AF=0.278;AN=36;BaseQRankSum=-0.206;DP=2758;Dels=0.00;FS=10.024;HRun=0;HaplotypeScore=10.3320;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.138;QD=41.76;ReadPosRankSum=0.544;SB=-11484.11	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:190,0:190:99:0,572,7934	0/0:107,0:107:99:0,322,4468	0/0:164,0:164:99:0,494,6849	./.	./.	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:199,0:199:99:0,599,8310	1/1:0,103:103:99:4301,310,0	0/0:150,0:150:99:0,452,6264	1/1:0,77:77:99:3216,232,0	1/1:0,84:84:99:3508,253,0	1/1:0,106:106:99:4427,319,0	0/0:168,0:168:99:0,506,7016	0/0:193,0:193:99:0,581,8060	0/0:156,0:156:99:0,470,6515	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	./.	1/1:0,199:199:99:8310,599,0
gi|293339394|gb|GU595196.1|	57671	.	T	A	14741.42	.	AC=8;AF=0.222;AN=36;BaseQRankSum=-0.873;DP=2761;Dels=0.00;FS=11.676;HRun=0;HaplotypeScore=10.3320;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.482;QD=41.76;ReadPosRankSum=-5.553;SB=-6890.47	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:193,0:193:99:0,581,8060	0/0:109,0:109:99:0,328,4552	0/0:165,0:165:99:0,497,6890	./.	./.	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:195,0:195:99:0,587,8143	1/1:0,96:96:99:4009,289,0	0/0:150,0:150:99:0,452,6264	1/1:0,79:79:99:3299,238,0	1/1:0,83:83:99:3466,250,0	1/1:0,95:95:99:3967,286,0	0/0:163,0:163:99:0,491,6807	0/0:195,0:195:99:0,587,8143	0/0:160,0:160:99:0,482,6682	0/0:185,0:185:99:0,557,7726	0/0:162,0:162:99:0,488,6765	./.	0/0:209,0:209:99:0,629,8728
gi|293339394|gb|GU595196.1|	57695	.	G	A	26851.91	.	AC=10;AF=0.278;AN=36;BaseQRankSum=-0.232;DP=2777;Dels=0.00;FS=12.753;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.423;QD=41.76;ReadPosRankSum=2.577;SB=-12569.88	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	0/0:101,0:101:99:0,304,4218	0/0:166,0:166:99:0,500,6932	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	1/1:0,95:95:99:3967,286,0	0/0:161,0:161:99:0,485,6723	1/1:0,110:110:99:4594,331,0	1/1:0,93:93:99:3884,280,0	1/1:0,101:101:99:4218,304,0	0/0:149,0:149:99:0,448,6222	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	0/0:178,0:178:99:0,536,7433	0/0:156,0:156:99:0,470,6515	./.	1/1:0,244:244:99:10190,734,0
gi|293339394|gb|GU595196.1|	57746	.	A	G	38795.37	.	AC=12;AF=0.333;AN=36;BaseQRankSum=0.373;DP=2995;Dels=0.00;FS=1.237;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.754;QD=41.76;ReadPosRankSum=1.887;SB=-19042.73	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	1/1:0,120:120:99:5011,361,0	1/1:0,159:159:99:6640,479,0	./.	./.	0/0:188,0:188:99:0,566,7851	0/0:141,0:141:99:0,424,5888	0/0:170,0:170:99:0,512,7099	1/1:0,162:162:99:6765,488,0	0/0:167,0:167:99:0,503,6974	1/1:0,173:173:99:7225,521,0	1/1:0,160:160:99:6682,482,0	1/1:0,155:155:99:6473,467,0	0/0:178,0:178:99:0,536,7433	0/0:201,0:201:99:0,605,8394	0/0:167,0:167:99:0,503,6974	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	./.	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	57773	.	G	A	35538.06	.	AC=12;AF=0.333;AN=36;BaseQRankSum=-0.545;DP=2918;Dels=0.00;FS=3.111;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.961;QD=41.76;ReadPosRankSum=-0.964;SB=-16871.19	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:173,0:173:99:0,521,7225	1/1:0,120:120:99:5011,361,0	1/1:0,155:155:99:6473,467,0	./.	./.	0/0:174,0:174:99:0,524,7266	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	1/1:0,128:128:99:5345,385,0	0/0:158,0:158:99:0,476,6598	1/1:0,169:169:99:7057,509,0	1/1:0,149:149:99:6222,448,0	1/1:0,130:130:99:5429,391,0	0/0:177,0:177:99:0,533,7392	0/0:191,0:191:99:0,575,7976	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	./.	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	57794	.	C	G	32280.76	.	AC=12;AF=0.333;AN=36;BaseQRankSum=-0.164;DP=2745;Dels=0.00;FS=8.625;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.442;QD=41.76;ReadPosRankSum=2.512;SB=-14824.94	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:160,0:160:99:0,482,6682	1/1:0,110:110:99:4594,331,0	1/1:0,132:132:99:5512,397,0	./.	./.	0/0:147,0:147:99:0,442,6139	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	1/1:0,118:118:99:4928,355,0	0/0:142,0:142:99:0,427,5930	1/1:0,145:145:99:6055,436,0	1/1:0,131:131:99:5471,394,0	1/1:0,137:137:99:5721,412,0	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	./.	0/0:202,0:202:99:0,608,8436
gi|293339394|gb|GU595196.1|	57845	.	A	G	20379.06	.	AC=12;AF=0.333;AN=36;BaseQRankSum=-1.179;DP=2583;Dels=0.00;FS=57.976;HRun=0;HaplotypeScore=0.9443;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.791;QD=41.76;ReadPosRankSum=-2.828;SB=-7391.27	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:186,0:186:99:0,560,7767	1/1:0,11:11:33.11:459,33,0	1/1:0,24:24:72.24:1002,72,0	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:204,0:204:99:0,614,8519	1/1:0,106:106:99:4427,319,0	0/0:155,0:155:99:0,467,6473	1/1:0,117:117:99:4886,352,0	1/1:0,119:119:99:4969,358,0	1/1:0,111:111:99:4635,334,0	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	./.	0/0:174,0:174:99:0,524,7266
gi|293339394|gb|GU595196.1|	57848	.	G	T	1002.42	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.282;DP=2571;Dels=0.00;FS=3.663;HRun=0;HaplotypeScore=1.4443;InbreedingCoeff=0.9989;MQ=254.00;MQ0=0;MQRankSum=0.584;QD=38.55;ReadPosRankSum=-7.913;SB=-495.70	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	1/1:0,8:8:24.08:334,24,0	1/1:0,18:18:54.18:752,54,0	./.	./.	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:202,0:202:99:0,608,8436	0/0:97,0:97:99:0,292,4051	0/0:160,0:160:99:0,482,6682	0/0:114,0:114:99:0,343,4761	0/0:125,0:125:99:0,376,5220	0/0:107,0:107:99:0,322,4468	0/0:170,0:170:99:0,512,7099	0/0:171,0:171:99:0,515,7141	0/0:184,0:184:99:0,554,7684	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	./.	0/0:178,0:178:99:0,536,7433
gi|293339394|gb|GU595196.1|	57851	.	G	A	19084.49	.	AC=12;AF=0.333;AN=36;BaseQRankSum=0.783;DP=2565;Dels=0.00;FS=82.472;HRun=1;HaplotypeScore=0.4999;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.381;QD=41.76;ReadPosRankSum=-0.572;SB=-6346.96	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:177,0:177:99:0,533,7392	1/1:0,10:10:30.10:418,30,0	1/1:0,13:13:39.13:543,39,0	./.	./.	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	0/0:205,0:205:99:0,617,8561	1/1:0,97:97:99:4051,292,0	0/0:162,0:162:99:0,488,6765	1/1:0,110:110:99:4594,331,0	1/1:0,120:120:99:5011,361,0	1/1:0,107:107:99:4468,322,0	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:184,0:184:99:0,554,7684	0/0:173,0:173:99:0,521,7225	0/0:178,0:178:99:0,536,7433	./.	0/0:182,0:182:99:0,548,7600
gi|293339394|gb|GU595196.1|	57978	.	A	G	36080.95	.	AC=12;AF=0.333;AN=36;BaseQRankSum=-0.024;DP=2940;Dels=0.00;FS=1.453;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.291;QD=41.76;ReadPosRankSum=-0.626;SB=-17998.72	GT:AD:DP:GQ:PL	0/0:138,0:138:99:0,415,5763	0/0:154,0:154:99:0,464,6431	1/1:0,111:111:99:4635,334,0	1/1:0,155:155:99:6473,467,0	./.	./.	0/0:182,0:182:99:0,548,7600	0/0:200,0:200:99:0,602,8352	0/0:167,0:167:99:0,503,6974	1/1:0,146:146:99:6097,439,0	0/0:156,0:156:99:0,470,6515	1/1:0,149:149:99:6222,448,0	1/1:0,152:152:99:6348,458,0	1/1:0,151:151:99:6306,455,0	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:191,0:191:99:0,575,7976	0/0:160,0:160:99:0,482,6682	0/0:175,0:175:99:0,527,7308	./.	0/0:210,0:210:99:0,632,8770
gi|293339394|gb|GU595196.1|	58020	.	A	T	20587.86	.	AC=8;AF=0.222;AN=36;BaseQRankSum=1.564;DP=2678;Dels=0.00;FS=13.875;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.606;QD=41.76;ReadPosRankSum=6.097;SB=-9563.14	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:88,0:88:99:0,265,3675	0/0:118,0:118:99:0,355,4928	./.	./.	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:156,0:156:99:0,470,6515	1/1:0,109:109:99:4552,328,0	0/0:168,0:168:99:0,506,7016	1/1:0,134:134:99:5596,403,0	1/1:0,131:131:99:5471,394,0	1/1:0,119:119:99:4969,358,0	0/0:153,0:153:99:0,461,6389	0/0:137,0:137:99:0,412,5721	0/0:177,0:177:99:0,533,7392	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	./.	0/0:179,0:179:99:0,539,7475
gi|293339394|gb|GU595196.1|	58049	.	T	C	2213.12	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.273;DP=2236;Dels=0.00;FS=32.615;HRun=0;HaplotypeScore=1.7775;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.002;QD=40.24;ReadPosRankSum=-7.371;SB=-626.42	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:175,0:175:99:0,527,7308	1/1:0,24:24:72.24:1002,72,0	1/1:0,31:31:93.31:1295,93,0	./.	./.	0/0:189,0:189:99:0,569,7893	0/0:164,0:164:99:0,494,6849	0/0:177,0:177:99:0,533,7392	0/0:27,0:27:81.27:0,81,1128	0/0:173,0:173:99:0,521,7225	0/0:33,0:33:99:0,99,1378	0/0:32,0:32:96.32:0,96,1336	0/0:28,0:28:84.28:0,84,1169	0/0:140,0:140:99:0,421,5846	0/0:154,0:154:99:0,464,6431	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	./.	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	58056	.	C	A,G	1246.72	.	AC=8,2;AF=0.222,0.056;AN=36;BaseQRankSum=0.781;DP=2103;Dels=0.00;FS=9.616;HaplotypeScore=0.4444;InbreedingCoeff=0.9840;MQ=254.00;MQ0=0;MQRankSum=0.870;QD=23.52;ReadPosRankSum=-9.602;SB=-492.55	GT:AD:DP:GQ:PL	0/0:182,0,0:182:99:0,548,7600,548,7600,7600	0/0:184,0,0:184:99:0,554,7684,554,7684,7684	0/2:5,0,1:6:23.70:24,39,233,0,194,191	0/2:12,0,3:15:80.13:80,116,581,0,465,456	./.	./.	0/0:176,0,0:176:99:0,530,7350,530,7350,7350	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	0/0:181,0,0:181:99:0,545,7559,545,7559,7559	1/1:0,3,0:3:9.03:125,9,0,125,9,125	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	1/1:0,8,0:8:24.08:334,24,0,334,24,334	1/1:0,10,0:10:30.10:418,30,0,418,30,418	1/1:0,11,0:11:33.11:459,33,0,459,33,459	0/0:151,0,0:151:99:0,455,6306,455,6306,6306	0/0:153,0,0:153:99:0,461,6389,461,6389,6389	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:158,0,0:158:99:0,476,6598,476,6598,6598	./.	0/0:188,0,0:188:99:0,566,7851,566,7851,7851
gi|293339394|gb|GU595196.1|	58057	.	A	T	186.51	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.177;DP=2106;Dels=0.00;FS=21.377;HRun=0;HaplotypeScore=1.3887;InbreedingCoeff=-0.0736;MQ=254.00;MQ0=0;MQRankSum=-0.191;QD=10.97;ReadPosRankSum=-4.019;SB=0.63	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:187,0:187:99:0,563,7809	0/1:5,2:7:62.45:62,0,188	0/1:5,5:10:99:179,0,179	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:183,0:183:99:0,551,7642	0/0:1,0:1:3.01:0,3,42	0/0:173,0:173:99:0,521,7225	0/0:3,0:3:9.03:0,9,125	0/0:6,0:6:18.06:0,18,251	0/0:7,0:7:21.07:0,21,292	0/0:155,0:155:99:0,467,6473	0/0:151,0:151:99:0,455,6306	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	./.	0/0:188,0:188:99:0,566,7851
gi|293339394|gb|GU595196.1|	58058	.	A	G	63.13	.	AC=2;AF=0.071;AN=28;BaseQRankSum=0.272;DP=2091;Dels=0.00;FS=4.272;HRun=0;HaplotypeScore=0.5714;InbreedingCoeff=-0.0769;MQ=254.00;MQ0=0;MQRankSum=0.497;QD=3.71;ReadPosRankSum=-3.372;SB=-32.69	GT:AD:DP:GQ:PL	0/0:191,0:191:99:0,575,7976	0/0:187,0:187:99:0,563,7809	0/1:5,2:7:62.45:62,0,188	0/1:8,2:10:53.42:53,0,304	./.	./.	0/0:180,0:180:99:0,542,7517	0/0:176,0:176:99:0,530,7350	0/0:184,0:184:99:0,554,7684	./.	0/0:174,0:174:99:0,524,7266	./.	./.	./.	0/0:153,0:153:99:0,461,6389	0/0:152,0:152:99:0,458,6348	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	./.	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	58100	.	T	C	643.94	.	AC=8;AF=0.222;AN=36;BaseQRankSum=1.030;DP=2318;Dels=0.00;FS=10.224;HRun=3;HaplotypeScore=0.9999;InbreedingCoeff=0.9709;MQ=254.00;MQ0=0;MQRankSum=0.452;QD=35.77;ReadPosRankSum=-7.079;SB=-202.46	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:173,0:173:99:0,521,7225	0/0:111,0:111:99:0,334,4635	0/0:134,0:134:99:0,403,5596	./.	./.	0/0:162,0:162:99:0,488,6765	0/0:190,0:190:99:0,572,7934	0/0:158,0:158:99:0,476,6598	1/1:0,5:5:15.05:209,15,0	0/0:172,0:172:99:0,518,7183	1/1:0,4:4:12.04:167,12,0	1/1:0,5:5:15.05:209,15,0	1/1:0,4:4:12.04:167,12,0	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	./.	0/0:156,0:156:99:0,470,6515
gi|293339394|gb|GU595196.1|	58108	.	A	C	11609.39	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.936;DP=2442;Dels=0.00;FS=0.464;HRun=0;HaplotypeScore=0.9999;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.652;QD=41.76;ReadPosRankSum=2.070;SB=-5721.18	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	1/1:0,126:126:99:5262,379,0	1/1:0,152:152:99:6348,458,0	./.	./.	0/0:165,0:165:99:0,497,6890	0/0:182,0:182:99:0,548,7600	0/0:156,0:156:99:0,470,6515	0/0:35,0:35:99:0,105,1462	0/0:171,0:171:99:0,515,7141	0/0:39,0:39:99:0,117,1629	0/0:37,0:37:99:0,111,1545	0/0:33,0:33:99:0,99,1378	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:159,0:159:99:0,479,6640	./.	0/0:152,0:152:99:0,458,6348
gi|293339394|gb|GU595196.1|	58139	.	T	G	22884.68	.	AC=8;AF=0.222;AN=36;BaseQRankSum=0.942;DP=2775;Dels=0.00;FS=13.951;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.909;QD=41.76;ReadPosRankSum=4.699;SB=-10565.38	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:154,0:154:99:0,464,6431	0/0:110,0:110:99:0,331,4594	0/0:172,0:172:99:0,518,7183	./.	./.	0/0:157,0:157:99:0,473,6556	0/0:176,0:176:99:0,530,7350	0/0:159,0:159:99:0,479,6640	1/1:0,123:123:99:5137,370,0	0/0:169,0:169:99:0,509,7057	1/1:0,140:140:99:5846,421,0	1/1:0,138:138:99:5763,415,0	1/1:0,147:147:99:6139,442,0	0/0:177,0:177:99:0,533,7392	0/0:156,0:156:99:0,470,6515	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:149,0:149:99:0,448,6222	./.	0/0:155,0:155:99:0,467,6473
gi|293339394|gb|GU595196.1|	58184	.	C	A	12068.76	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.228;DP=2895;Dels=0.00;FS=0.451;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.095;QD=41.76;ReadPosRankSum=0.977;SB=-5804.71	GT:AD:DP:GQ:PL	0/0:140,0:140:99:0,421,5846	0/0:150,0:150:99:0,452,6264	1/1:0,110:110:99:4594,331,0	1/1:0,179:179:99:7475,539,0	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:174,0:174:99:0,524,7266	0/0:178,0:178:99:0,536,7433	0/0:143,0:143:99:0,430,5972	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	0/0:142,0:142:99:0,427,5930	0/0:144,0:144:99:0,433,6013	0/0:156,0:156:99:0,470,6515	0/0:183,0:183:99:0,551,7642	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	./.	0/0:168,0:168:99:0,506,7016
gi|293339394|gb|GU595196.1|	58281	.	G	A	6138.79	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.870;DP=2704;Dels=0.00;FS=0.627;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.010;QD=41.76;ReadPosRankSum=2.229;SB=-2881.48	GT:AD:DP:GQ:PL	0/0:204,0:204:99:0,614,8519	0/0:159,0:159:99:0,479,6640	0/0:110,0:110:99:0,331,4594	0/0:174,0:174:99:0,524,7266	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:170,0:170:99:0,512,7099	0/0:189,0:189:99:0,569,7893	0/0:90,0:90:99:0,271,3758	0/0:158,0:158:99:0,476,6598	0/0:99,0:99:99:0,298,4134	0/0:111,0:111:99:0,334,4635	0/0:101,0:101:99:0,304,4218	0/0:175,0:175:99:0,527,7308	0/0:150,0:150:99:0,452,6264	0/0:154,0:154:99:0,464,6431	0/0:145,0:145:99:0,436,6055	0/0:189,0:189:99:0,569,7893	./.	1/1:0,147:147:99:6139,442,0
gi|293339394|gb|GU595196.1|	58316	.	A	C,T	32197.24	.	AC=12,2;AF=0.333,0.056;AN=36;BaseQRankSum=1.154;DP=2655;Dels=0.00;FS=29.164;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.151;QD=41.76;ReadPosRankSum=0.688;SB=-13492.29	GT:AD:DP:GQ:PL	0/0:193,0,0:193:99:0,581,8060,581,8060,8060	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	1/1:0,109,0:109:99:4552,328,0,4552,328,4552	1/1:0,180,0:180:99:7517,542,0,7517,542,7517	./.	./.	0/0:183,0,0:183:99:0,551,7642,551,7642,7642	0/0:157,0,0:157:99:0,473,6556,473,6556,6556	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	1/1:0,92,0:92:99:3842,277,0,3842,277,3842	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	1/1:0,109,0:109:99:4552,328,0,4552,328,4552	1/1:0,109,0:109:99:4552,328,0,4552,328,4552	1/1:0,99,0:99:99:4134,298,0,4134,298,4134	0/0:174,0,0:174:99:0,524,7266,524,7266,7266	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	./.	2/2:0,0,73:73:99:3049,3049,3049,220,220,0
gi|293339394|gb|GU595196.1|	58317	.	C	G	2778.72	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.576;DP=2650;Dels=0.00;FS=4.087;HRun=0;HaplotypeScore=7.5545;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.409;QD=40.86;ReadPosRankSum=8.856;SB=-1294.59	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:166,0:166:99:0,500,6932	0/0:109,0:109:99:0,328,4552	0/0:179,0:179:99:0,539,7475	./.	./.	0/0:184,0:184:99:0,554,7684	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:94,0:94:99:0,283,3925	0/0:163,0:163:99:0,491,6807	0/0:112,0:112:99:0,337,4677	0/0:109,0:109:99:0,328,4552	0/0:98,0:98:99:0,295,4093	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	./.	1/1:0,68:68:99:2840,205,0
gi|293339394|gb|GU595196.1|	58349	.	T	C	12945.72	.	AC=4;AF=0.118;AN=34;BaseQRankSum=0.888;DP=2640;Dels=0.00;FS=3.644;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.051;QD=41.76;ReadPosRankSum=-0.091;SB=-6097.03	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:152,0:152:99:0,458,6348	1/1:0,117:117:99:4886,352,0	1/1:0,193:193:99:8060,581,0	./.	./.	0/0:199,0:199:99:0,599,8310	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	0/0:106,0:106:99:0,319,4427	0/0:172,0:172:99:0,518,7183	0/0:135,0:135:99:0,406,5638	0/0:139,0:139:99:0,418,5805	0/0:127,0:127:99:0,382,5304	0/0:170,0:170:99:0,512,7099	0/0:151,0:151:99:0,455,6306	0/0:166,0:166:99:0,500,6932	0/0:155,0:155:99:0,467,6473	0/0:161,0:161:99:0,485,6723	./.	./.
gi|293339394|gb|GU595196.1|	58360	.	G	A	192.79	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.052;DP=2631;Dels=0.00;FS=1.626;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9918;MQ=254.00;MQ0=0;MQRankSum=0.621;QD=32.13;ReadPosRankSum=-3.942;SB=-79.44	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:141,0:141:99:0,424,5888	0/0:117,0:117:99:0,352,4886	0/0:189,0:189:99:0,569,7893	./.	./.	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	0/0:132,0:132:99:0,397,5512	0/0:178,0:178:99:0,536,7433	0/0:146,0:146:99:0,439,6097	0/0:125,0:125:99:0,376,5220	0/0:134,0:134:99:0,403,5596	0/0:160,0:160:99:0,482,6682	0/0:145,0:145:99:0,436,6055	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:160,0:160:99:0,482,6682	./.	1/1:0,6:6:18.06:251,18,0
gi|293339394|gb|GU595196.1|	58380	.	G	A	12361.08	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.970;DP=2770;Dels=0.00;FS=0.447;HRun=0;HaplotypeScore=4.6105;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.008;QD=41.76;ReadPosRankSum=0.951;SB=-6138.79	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:144,0:144:99:0,433,6013	1/1:0,112:112:99:4677,337,0	1/1:0,184:184:99:7684,554,0	./.	./.	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:141,0:141:99:0,424,5888	0/0:186,0:186:99:0,560,7767	0/0:155,0:155:99:0,467,6473	0/0:160,0:160:99:0,482,6682	0/0:159,0:159:99:0,479,6640	0/0:169,0:169:99:0,509,7057	0/0:143,0:143:99:0,430,5972	0/0:156,0:156:99:0,470,6515	0/0:155,0:155:99:0,467,6473	0/0:168,0:168:99:0,506,7016	./.	0/0:83,0:83:99:0,250,3466
gi|293339394|gb|GU595196.1|	58384	.	G	A	4176.05	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.349;DP=2827;Dels=0.00;FS=2.130;HRun=0;HaplotypeScore=5.5548;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.773;QD=41.76;ReadPosRankSum=-0.049;SB=-1962.75	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:152,0:152:99:0,458,6348	0/0:114,0:114:99:0,343,4761	0/0:175,0:175:99:0,527,7308	./.	./.	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:145,0:145:99:0,436,6055	0/0:184,0:184:99:0,554,7684	0/0:153,0:153:99:0,461,6389	0/0:163,0:163:99:0,491,6807	0/0:155,0:155:99:0,467,6473	0/0:170,0:170:99:0,512,7099	0/0:147,0:147:99:0,442,6139	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	./.	1/1:0,100:100:99:4176,301,0
gi|293339394|gb|GU595196.1|	58415	.	G	C	27436.56	.	AC=8;AF=0.222;AN=36;BaseQRankSum=-1.606;DP=3034;Dels=0.00;FS=6.637;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.985;QD=41.76;ReadPosRankSum=-0.315;SB=-13572.13	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:159,0:159:99:0,479,6640	0/0:104,0:104:99:0,313,4343	0/0:183,0:183:99:0,551,7642	./.	./.	0/0:190,0:190:99:0,572,7934	0/0:166,0:166:99:0,500,6932	0/0:195,0:195:99:0,587,8143	1/1:0,143:143:99:5972,430,0	0/0:164,0:164:99:0,494,6849	1/1:0,169:169:99:7057,509,0	1/1:0,171:171:99:7141,515,0	1/1:0,174:174:99:7266,524,0	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:191,0:191:99:0,575,7976	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	./.	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	58439	.	C	T	12695.16	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-1.780;DP=2984;Dels=0.00;FS=5.178;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.590;QD=41.76;ReadPosRankSum=0.620;SB=-5971.75	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:123,0:123:99:0,370,5137	1/1:0,109:109:99:4552,328,0	1/1:0,195:195:99:8143,587,0	./.	./.	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:197,0:197:99:0,593,8227	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:183,0:183:99:0,551,7642	0/0:173,0:173:99:0,521,7225	0/0:136,0:136:99:0,409,5679	./.	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	58469	.	C	A	23678.13	.	AC=8;AF=0.222;AN=36;BaseQRankSum=0.028;DP=2922;Dels=0.00;FS=6.855;HRun=0;HaplotypeScore=8.9433;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.241;QD=41.76;ReadPosRankSum=4.468;SB=-10648.90	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:146,0:146:99:0,439,6097	0/0:127,0:127:99:0,382,5304	0/0:173,0:173:99:0,521,7225	./.	./.	0/0:194,0:194:99:0,584,8102	0/0:174,0:174:99:0,524,7266	0/0:155,0:155:99:0,467,6473	1/1:0,157:157:99:6556,473,0	0/0:174,0:174:99:0,524,7266	1/1:0,138:138:99:5763,415,0	1/1:0,147:147:99:6139,442,0	1/1:0,125:125:99:5220,376,0	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:185,0:185:99:0,557,7726	0/0:152,0:152:99:0,458,6348	./.	0/0:180,0:180:99:0,542,7517
gi|293339394|gb|GU595196.1|	58475	.	T	C	7683.92	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.462;DP=2981;Dels=0.00;FS=3.947;HRun=0;HaplotypeScore=10.2209;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.795;QD=41.76;ReadPosRankSum=0.212;SB=-3758.45	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:147,0:147:99:0,442,6139	0/0:136,0:136:99:0,409,5679	0/0:171,0:171:99:0,515,7141	./.	./.	0/0:210,0:210:99:0,632,8770	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:150,0:150:99:0,452,6264	0/0:175,0:175:99:0,527,7308	0/0:136,0:136:99:0,409,5679	0/0:148,0:148:99:0,445,6181	0/0:128,0:128:99:0,385,5345	0/0:192,0:192:99:0,578,8018	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:188,0:188:99:0,566,7851	0/0:163,0:163:99:0,491,6807	./.	1/1:0,184:184:99:7684,554,0
gi|293339394|gb|GU595196.1|	58500	.	A	C	12194.04	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-1.732;DP=2709;Dels=0.00;FS=1.209;HRun=1;HaplotypeScore=10.4431;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.700;QD=41.76;ReadPosRankSum=-0.427;SB=-6055.27	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:165,0:165:99:0,497,6890	1/1:0,128:128:99:5345,385,0	1/1:0,164:164:99:6849,494,0	./.	./.	0/0:227,0:227:99:0,683,9480	0/0:183,0:183:99:0,551,7642	0/0:169,0:169:99:0,509,7057	0/0:69,0:69:99:0,208,2881	0/0:155,0:155:99:0,467,6473	0/0:82,0:82:99:0,247,3424	0/0:88,0:88:99:0,265,3675	0/0:78,0:78:99:0,235,3257	0/0:181,0:181:99:0,545,7559	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	./.	0/0:162,0:162:99:0,488,6765
gi|293339394|gb|GU595196.1|	58510	.	C	G	7850.96	.	AC=8;AF=0.222;AN=36;BaseQRankSum=-2.021;DP=2561;Dels=0.00;FS=3.933;HRun=1;HaplotypeScore=20.2195;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.982;QD=41.76;ReadPosRankSum=4.018;SB=-3841.97	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:159,0:159:99:0,479,6640	0/0:130,0:130:99:0,391,5429	0/0:174,0:174:99:0,524,7266	./.	./.	0/0:204,0:204:99:0,614,8519	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	1/1:0,40:40:99:1670,120,0	0/0:163,0:163:99:0,491,6807	1/1:0,51:51:99:2130,154,0	1/1:0,51:51:99:2130,154,0	1/1:0,46:46:99:1921,138,0	0/0:176,0:176:99:0,530,7350	0/0:160,0:160:99:0,482,6682	0/0:175,0:175:99:0,527,7308	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	./.	0/0:164,0:164:99:0,494,6849
gi|293339394|gb|GU595196.1|	58511	.	C	A	7976.24	.	AC=8;AF=0.222;AN=36;BaseQRankSum=1.273;DP=2564;Dels=0.00;FS=1.503;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.662;QD=41.76;ReadPosRankSum=1.985;SB=-3925.49	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:161,0:161:99:0,485,6723	0/0:134,0:134:99:0,403,5596	0/0:173,0:173:99:0,521,7225	./.	./.	0/0:200,0:200:99:0,602,8352	0/0:184,0:184:99:0,554,7684	0/0:177,0:177:99:0,533,7392	1/1:0,43:43:99:1796,129,0	0/0:162,0:162:99:0,488,6765	1/1:0,51:51:99:2130,154,0	1/1:0,49:49:99:2046,147,0	1/1:0,48:48:99:2004,144,0	0/0:175,0:175:99:0,527,7308	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	./.	0/0:162,0:162:99:0,488,6765
gi|293339394|gb|GU595196.1|	58531	.	C	T	11859.95	.	AC=8;AF=0.222;AN=36;BaseQRankSum=1.126;DP=2577;Dels=0.00;FS=0.704;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.946;QD=41.76;ReadPosRankSum=-3.848;SB=-5512.38	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:129,0:129:99:0,388,5387	0/0:185,0:185:99:0,557,7726	./.	./.	0/0:186,0:186:99:0,560,7767	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	1/1:0,68:68:99:2840,205,0	0/0:161,0:161:99:0,485,6723	1/1:0,69:69:99:2881,208,0	1/1:0,69:69:99:2881,208,0	1/1:0,78:78:99:3257,235,0	0/0:161,0:161:99:0,485,6723	0/0:146,0:146:99:0,439,6097	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	0/0:163,0:163:99:0,491,6807	./.	0/0:145,0:145:99:0,436,6055
gi|293339394|gb|GU595196.1|	58588	.	G	A	45435.26	.	AC=14;AF=0.389;AN=36;BaseQRankSum=-1.831;DP=2969;Dels=0.00;FS=8.308;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-3.140;QD=41.76;ReadPosRankSum=0.956;SB=-21172.51	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	1/1:0,119:119:99:4969,358,0	1/1:0,190:190:99:7934,572,0	./.	./.	0/0:195,0:195:99:0,587,8143	0/0:150,0:150:99:0,452,6264	0/0:178,0:178:99:0,536,7433	1/1:0,160:160:99:6682,482,0	0/0:164,0:164:99:0,494,6849	1/1:0,181:181:99:7559,545,0	1/1:0,155:155:99:6473,467,0	1/1:0,153:153:99:6389,461,0	0/0:192,0:192:99:0,578,8018	0/0:167,0:167:99:0,503,6974	0/0:187,0:187:99:0,563,7809	0/0:150,0:150:99:0,452,6264	0/0:176,0:176:99:0,530,7350	./.	1/1:0,130:130:99:5429,391,0
gi|293339394|gb|GU595196.1|	58614	.	A	G	4050.77	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.101;DP=2860;Dels=0.00;FS=3.277;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.295;QD=41.76;ReadPosRankSum=2.105;SB=-1837.47	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:157,0:157:99:0,473,6556	0/0:118,0:118:99:0,355,4928	0/0:201,0:201:99:0,605,8394	./.	./.	0/0:192,0:192:99:0,578,8018	0/0:131,0:131:99:0,394,5471	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:188,0:188:99:0,566,7851	0/0:145,0:145:99:0,436,6055	0/0:138,0:138:99:0,415,5763	0/0:199,0:199:99:0,599,8310	0/0:147,0:147:99:0,442,6139	0/0:186,0:186:99:0,560,7767	0/0:149,0:149:99:0,448,6222	0/0:148,0:148:99:0,445,6181	./.	1/1:0,97:97:99:4051,292,0
gi|293339394|gb|GU595196.1|	58627	.	C	T	4635.42	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.892;DP=2921;Dels=0.00;FS=4.766;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.634;QD=41.76;ReadPosRankSum=0.722;SB=-2088.04	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:153,0:153:99:0,461,6389	0/0:123,0:123:99:0,370,5137	0/0:218,0:218:99:0,656,9104	./.	./.	0/0:201,0:201:99:0,605,8394	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:179,0:179:99:0,539,7475	0/0:155,0:155:99:0,467,6473	0/0:143,0:143:99:0,430,5972	0/0:198,0:198:99:0,596,8269	0/0:150,0:150:99:0,452,6264	0/0:180,0:180:99:0,542,7517	0/0:155,0:155:99:0,467,6473	0/0:136,0:136:99:0,409,5679	./.	1/1:0,111:111:99:4635,334,0
gi|293339394|gb|GU595196.1|	58653	.	C	G	5888.23	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.332;DP=2899;Dels=0.00;FS=23.648;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.099;QD=41.76;ReadPosRankSum=2.886;SB=-2213.32	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:147,0:147:99:0,442,6139	0/0:125,0:125:99:0,376,5220	0/0:192,0:192:99:0,578,8018	./.	./.	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	0/0:151,0:151:99:0,455,6306	0/0:156,0:156:99:0,470,6515	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:152,0:152:99:0,458,6348	0/0:156,0:156:99:0,470,6515	./.	1/1:0,141:141:99:5888,424,0
gi|293339394|gb|GU595196.1|	58873	.	C	G	523.68	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.538;DP=2768;Dels=0.00;FS=5.225;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.575;QD=37.41;ReadPosRankSum=-5.235;SB=-208.28	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:108,0:108:99:0,325,4510	0/0:190,0:190:99:0,572,7934	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:144,0:144:99:0,433,6013	0/0:168,0:168:99:0,506,7016	0/0:156,0:156:99:0,470,6515	0/0:182,0:182:99:0,548,7600	0/0:130,0:130:99:0,391,5429	0/0:163,0:163:99:0,491,6807	0/0:185,0:185:99:0,557,7726	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:145,0:145:99:0,436,6055	./.	1/1:0,14:14:42.14:585,42,0
gi|293339394|gb|GU595196.1|	58875	.	C	A	481.94	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.832;DP=2763;Dels=0.00;FS=1.031;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-1.243;QD=37.07;ReadPosRankSum=-5.637;SB=-248.72	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:178,0:178:99:0,536,7433	0/0:105,0:105:99:0,316,4385	0/0:188,0:188:99:0,566,7851	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:159,0:159:99:0,479,6640	0/0:146,0:146:99:0,439,6097	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:184,0:184:99:0,554,7684	0/0:133,0:133:99:0,400,5554	0/0:164,0:164:99:0,494,6849	0/0:188,0:188:99:0,566,7851	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:173,0:173:99:0,521,7225	0/0:144,0:144:99:0,433,6013	./.	1/1:0,13:13:39.13:543,39,0
gi|293339394|gb|GU595196.1|	58878	.	C	T	690.70	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.706;DP=2759;Dels=0.00;FS=3.194;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.511;QD=38.37;ReadPosRankSum=-5.933;SB=-292.20	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:102,0:102:99:0,307,4260	0/0:184,0:184:99:0,554,7684	./.	./.	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	0/0:144,0:144:99:0,433,6013	0/0:167,0:167:99:0,503,6974	0/0:156,0:156:99:0,470,6515	0/0:183,0:183:99:0,551,7642	0/0:133,0:133:99:0,400,5554	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:180,0:180:99:0,542,7517	0/0:151,0:151:99:0,455,6306	0/0:170,0:170:99:0,512,7099	0/0:143,0:143:99:0,430,5972	./.	1/1:0,18:18:54.18:752,54,0
gi|293339394|gb|GU595196.1|	58959	.	C	T	3029.28	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.110;DP=2876;Dels=0.00;FS=1.402;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.040;QD=40.94;ReadPosRankSum=-3.017;SB=-1503.39	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:184,0:184:99:0,554,7684	0/0:114,0:114:99:0,343,4761	0/0:173,0:173:99:0,521,7225	./.	./.	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:156,0:156:99:0,470,6515	0/0:161,0:161:99:0,485,6723	0/0:159,0:159:99:0,479,6640	0/0:177,0:177:99:0,533,7392	./.	1/1:0,74:74:99:3090,223,0
gi|293339394|gb|GU595196.1|	58968	.	T	C	1692.95	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.942;DP=2831;Dels=0.00;FS=1.214;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.807;QD=40.31;ReadPosRankSum=-6.750;SB=-793.47	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:161,0:161:99:0,485,6723	0/0:118,0:118:99:0,355,4928	0/0:176,0:176:99:0,530,7350	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:161,0:161:99:0,485,6723	0/0:156,0:156:99:0,470,6515	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:163,0:163:99:0,491,6807	0/0:152,0:152:99:0,458,6348	0/0:183,0:183:99:0,551,7642	./.	1/1:0,42:42:99:1754,126,0
gi|293339394|gb|GU595196.1|	58980	.	A	G	11776.43	.	AC=4;AF=0.118;AN=34;BaseQRankSum=0.379;DP=2773;Dels=0.00;FS=4.610;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.135;QD=41.76;ReadPosRankSum=-0.412;SB=-5470.62	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	1/1:0,116:116:99:4844,349,0	1/1:0,166:166:99:6932,500,0	./.	./.	0/0:157,0:157:99:0,473,6556	0/0:160,0:160:99:0,482,6682	0/0:164,0:164:99:0,494,6849	0/0:150,0:150:99:0,452,6264	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:190,0:190:99:0,572,7934	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:155,0:155:99:0,467,6473	0/0:166,0:166:99:0,500,6932	./.	./.
gi|293339394|gb|GU595196.1|	58999	.	A	G	43389.01	.	AC=12;AF=0.353;AN=34;BaseQRankSum=-0.855;DP=2853;Dels=0.00;FS=12.852;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.193;QD=41.76;ReadPosRankSum=-0.520;SB=-20504.34	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:146,0:146:99:0,439,6097	1/1:0,131:131:99:5471,394,0	1/1:0,169:169:99:7057,509,0	./.	./.	0/0:172,0:172:99:0,518,7183	0/0:148,0:148:99:0,445,6181	0/0:158,0:158:99:0,476,6598	1/1:0,161:161:99:6723,485,0	0/0:179,0:179:99:0,539,7475	1/1:0,186:186:99:7767,560,0	1/1:0,202:202:99:8436,608,0	1/1:0,190:190:99:7934,572,0	0/0:172,0:172:99:0,518,7183	0/0:185,0:185:99:0,557,7726	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:153,0:153:99:0,461,6389	./.	./.
gi|293339394|gb|GU595196.1|	59010	.	T	G	1442.39	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.450;DP=2814;Dels=0.00;FS=8.859;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.476;QD=40.07;ReadPosRankSum=-6.172;SB=-542.90	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:143,0:143:99:0,430,5972	0/0:133,0:133:99:0,400,5554	0/0:159,0:159:99:0,479,6640	./.	./.	0/0:170,0:170:99:0,512,7099	0/0:150,0:150:99:0,452,6264	0/0:154,0:154:99:0,464,6431	0/0:153,0:153:99:0,461,6389	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	0/0:192,0:192:99:0,578,8018	0/0:192,0:192:99:0,578,8018	0/0:158,0:158:99:0,476,6598	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:142,0:142:99:0,427,5930	./.	1/1:0,36:36:99:1503,108,0
gi|293339394|gb|GU595196.1|	59028	.	C	T	4009.01	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.041;DP=2927;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.193;QD=41.76;ReadPosRankSum=1.679;SB=-1962.75	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:120,0:120:99:0,361,5011	0/0:174,0:174:99:0,524,7266	./.	./.	0/0:189,0:189:99:0,569,7893	0/0:160,0:160:99:0,482,6682	0/0:152,0:152:99:0,458,6348	0/0:151,0:151:99:0,455,6306	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:176,0:176:99:0,530,7350	0/0:192,0:192:99:0,578,8018	0/0:149,0:149:99:0,448,6222	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	./.	1/1:0,96:96:99:4009,289,0
gi|293339394|gb|GU595196.1|	59227	.	A	G	5136.54	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.640;DP=2941;Dels=0.00;FS=0.330;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.387;QD=41.76;ReadPosRankSum=0.332;SB=-2505.64	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:134,0:134:99:0,403,5596	0/0:163,0:163:99:0,491,6807	./.	./.	0/0:205,0:205:99:0,617,8561	0/0:174,0:174:99:0,524,7266	0/0:153,0:153:99:0,461,6389	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:150,0:150:99:0,452,6264	0/0:148,0:148:99:0,445,6181	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:180,0:180:99:0,542,7517	0/0:147,0:147:99:0,442,6139	0/0:167,0:167:99:0,503,6974	./.	1/1:0,123:123:99:5137,370,0
gi|293339394|gb|GU595196.1|	59250	.	G	A	12569.88	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.366;DP=2920;Dels=0.00;FS=0.216;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.211;QD=41.76;ReadPosRankSum=-0.174;SB=-6264.07	GT:AD:DP:GQ:PL	0/0:145,0:145:99:0,436,6055	0/0:173,0:173:99:0,521,7225	1/1:0,134:134:99:5596,403,0	1/1:0,167:167:99:6974,503,0	./.	./.	0/0:207,0:207:99:0,623,8644	0/0:175,0:175:99:0,527,7308	0/0:151,0:151:99:0,455,6306	0/0:173,0:173:99:0,521,7225	0/0:150,0:150:99:0,452,6264	0/0:150,0:150:99:0,452,6264	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:152,0:152:99:0,458,6348	0/0:157,0:157:99:0,473,6556	./.	0/0:137,0:137:99:0,412,5721
gi|293339394|gb|GU595196.1|	59283	.	C	T	31027.95	.	AC=8;AF=0.222;AN=36;BaseQRankSum=-1.243;DP=3025;Dels=0.00;FS=0.794;HRun=2;HaplotypeScore=13.4427;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.212;QD=41.76;ReadPosRankSum=-0.577;SB=-15033.74	GT:AD:DP:GQ:PL	0/0:142,0:142:99:0,427,5930	0/0:150,0:150:99:0,452,6264	0/0:116,0:116:99:0,349,4844	0/0:162,0:162:99:0,488,6765	./.	./.	0/0:198,0:198:99:0,596,8269	0/0:154,0:154:99:0,464,6431	0/0:175,0:175:99:0,527,7308	1/1:0,172:172:99:7183,518,0	0/0:167,0:167:99:0,503,6974	1/1:0,196:196:99:8185,590,0	1/1:0,206:206:99:8603,620,0	1/1:0,169:169:99:7057,509,0	0/0:166,0:166:99:0,500,6932	0/0:189,0:189:99:0,569,7893	0/0:191,0:191:99:0,575,7976	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	./.	0/0:134,0:134:99:0,403,5596
gi|293339394|gb|GU595196.1|	59289	.	C	T	11484.11	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.207;DP=3014;Dels=0.00;FS=9.446;HRun=0;HaplotypeScore=15.2757;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.975;QD=41.76;ReadPosRankSum=0.487;SB=-5387.10	GT:AD:DP:GQ:PL	0/0:142,0:142:99:0,427,5930	0/0:146,0:146:99:0,439,6097	1/1:0,116:116:99:4844,349,0	1/1:0,159:159:99:6640,479,0	./.	./.	0/0:204,0:204:99:0,614,8519	0/0:144,0:144:99:0,433,6013	0/0:187,0:187:99:0,563,7809	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:196,0:196:99:0,590,8185	0/0:204,0:204:99:0,614,8519	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	0/0:188,0:188:99:0,566,7851	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	./.	0/0:130,0:130:99:0,391,5429
gi|293339394|gb|GU595196.1|	59352	.	T	C	8769.69	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.873;DP=3089;Dels=0.00;FS=7.587;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.920;QD=41.76;ReadPosRankSum=-2.141;SB=-3967.25	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:149,0:149:99:0,448,6222	0/0:173,0:173:99:0,521,7225	./.	./.	0/0:177,0:177:99:0,533,7392	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	0/0:187,0:187:99:0,563,7809	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:159,0:159:99:0,479,6640	0/0:144,0:144:99:0,433,6013	0/0:171,0:171:99:0,515,7141	0/0:177,0:177:99:0,533,7392	0/0:181,0:181:99:0,545,7559	./.	1/1:0,210:210:99:8770,632,0
gi|293339394|gb|GU595196.1|	59439	.	A	C	31111.47	.	AC=10;AF=0.278;AN=36;BaseQRankSum=-1.095;DP=2890;Dels=0.00;FS=3.523;HRun=0;HaplotypeScore=0.2777;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.276;QD=41.76;ReadPosRankSum=-1.771;SB=-14866.70	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:150,0:150:99:0,452,6264	0/0:121,0:121:99:0,364,5053	0/0:169,0:169:99:0,509,7057	./.	./.	0/0:200,0:200:99:0,602,8352	0/0:158,0:158:99:0,476,6598	0/0:186,0:186:99:0,560,7767	1/1:0,180:180:99:7517,542,0	0/0:162,0:162:99:0,488,6765	1/1:0,190:190:99:7934,572,0	1/1:0,163:163:99:6807,491,0	1/1:0,167:167:99:6974,503,0	0/0:168,0:168:99:0,506,7016	0/0:152,0:152:99:0,458,6348	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:176,0:176:99:0,530,7350	./.	1/1:0,45:45:99:1879,135,0
gi|293339394|gb|GU595196.1|	59448	.	G	C	648.94	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.071;DP=2853;Dels=0.00;FS=3.272;HRun=4;HaplotypeScore=1.6109;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.306;QD=38.17;ReadPosRankSum=-3.852;SB=-292.06	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:160,0:160:99:0,482,6682	0/0:122,0:122:99:0,367,5095	0/0:169,0:169:99:0,509,7057	./.	./.	0/0:183,0:183:99:0,551,7642	0/0:162,0:162:99:0,488,6765	0/0:187,0:187:99:0,563,7809	0/0:156,0:156:99:0,470,6515	0/0:171,0:171:99:0,515,7141	0/0:183,0:183:99:0,551,7642	0/0:156,0:156:99:0,470,6515	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:178,0:178:99:0,536,7433	./.	1/1:0,17:17:51.17:710,51,0
gi|293339394|gb|GU595196.1|	59452	.	G	T	983.02	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.548;DP=2828;Dels=0.00;FS=4.967;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.485;QD=39.32;ReadPosRankSum=-4.262;SB=-417.61	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:123,0:123:99:0,370,5137	0/0:173,0:173:99:0,521,7225	./.	./.	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	0/0:186,0:186:99:0,560,7767	0/0:154,0:154:99:0,464,6431	0/0:164,0:164:99:0,494,6849	0/0:181,0:181:99:0,545,7559	0/0:155,0:155:99:0,467,6473	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:151,0:151:99:0,455,6306	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	./.	1/1:0,25:25:75.25:1044,75,0
gi|293339394|gb|GU595196.1|	59469	.	C	T	12862.20	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.092;DP=2908;Dels=0.00;FS=6.856;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.177;QD=41.76;ReadPosRankSum=1.109;SB=-6097.03	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	1/1:0,127:127:99:5304,382,0	1/1:0,181:181:99:7559,545,0	./.	./.	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:193,0:193:99:0,581,8060	0/0:150,0:150:99:0,452,6264	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:179,0:179:99:0,539,7475	0/0:179,0:179:99:0,539,7475	0/0:144,0:144:99:0,433,6013	0/0:185,0:185:99:0,557,7726	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	./.	0/0:99,0:99:99:0,298,4134
gi|293339394|gb|GU595196.1|	59492	.	C	T	7266.32	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.755;DP=2918;Dels=0.00;FS=9.288;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.485;QD=41.76;ReadPosRankSum=2.964;SB=-3299.09	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:132,0:132:99:0,397,5512	0/0:167,0:167:99:0,503,6974	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:164,0:164:99:0,494,6849	0/0:192,0:192:99:0,578,8018	0/0:152,0:152:99:0,458,6348	0/0:159,0:159:99:0,479,6640	0/0:141,0:141:99:0,424,5888	0/0:150,0:150:99:0,452,6264	0/0:146,0:146:99:0,439,6097	0/0:193,0:193:99:0,581,8060	0/0:150,0:150:99:0,452,6264	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:159,0:159:99:0,479,6640	./.	1/1:0,174:174:99:7266,524,0
gi|293339394|gb|GU595196.1|	59595	.	T	C	26684.87	.	AC=8;AF=0.222;AN=36;BaseQRankSum=-0.443;DP=2918;Dels=0.00;FS=16.487;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.177;QD=41.76;ReadPosRankSum=0.408;SB=-11901.71	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:145,0:145:99:0,436,6055	0/0:125,0:125:99:0,376,5220	0/0:185,0:185:99:0,557,7726	./.	./.	0/0:151,0:151:99:0,455,6306	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	1/1:0,150:150:99:6264,452,0	0/0:170,0:170:99:0,512,7099	1/1:0,176:176:99:7350,530,0	1/1:0,156:156:99:6515,470,0	1/1:0,157:157:99:6556,473,0	0/0:176,0:176:99:0,530,7350	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	./.	0/0:141,0:141:99:0,424,5888
gi|293339394|gb|GU595196.1|	59607	.	G	A	27728.88	.	AC=8;AF=0.222;AN=36;BaseQRankSum=0.594;DP=2969;Dels=0.00;FS=16.072;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.659;QD=41.76;ReadPosRankSum=0.042;SB=-12695.16	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	0/0:127,0:127:99:0,382,5304	0/0:212,0:212:99:0,638,8853	./.	./.	0/0:157,0:157:99:0,473,6556	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	1/1:0,151:151:99:6306,455,0	0/0:178,0:178:99:0,536,7433	1/1:0,177:177:99:7392,533,0	1/1:0,171:171:99:7141,515,0	1/1:0,165:165:99:6890,497,0	0/0:173,0:173:99:0,521,7225	0/0:154,0:154:99:0,464,6431	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	./.	0/0:141,0:141:99:0,424,5888
gi|293339394|gb|GU595196.1|	59675	.	A	C	34661.10	.	AC=10;AF=0.278;AN=36;BaseQRankSum=1.170;DP=3038;Dels=0.00;FS=2.040;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.648;QD=41.76;ReadPosRankSum=1.186;SB=-17080.00	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:177,0:177:99:0,533,7392	0/0:130,0:130:99:0,391,5429	0/0:167,0:167:99:0,503,6974	./.	./.	0/0:198,0:198:99:0,596,8269	0/0:181,0:181:99:0,545,7559	0/0:187,0:187:99:0,563,7809	1/1:0,185:185:99:7726,557,0	0/0:162,0:162:99:0,488,6765	1/1:0,186:186:99:7767,560,0	1/1:0,184:184:99:7684,554,0	1/1:0,177:177:99:7392,533,0	0/0:175,0:175:99:0,527,7308	0/0:177,0:177:99:0,533,7392	0/0:150,0:150:99:0,452,6264	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	./.	1/1:0,98:98:99:4093,295,0
gi|293339394|gb|GU595196.1|	59702	.	T	C,G	23302.28	.	AC=2,8;AF=0.056,0.222;AN=36;BaseQRankSum=-0.240;DP=2750;Dels=0.00;FS=13.100;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.704;QD=41.76;ReadPosRankSum=1.641;SB=-7218.94	GT:AD:DP:GQ:PL	0/0:183,0,0:183:99:0,551,7642,551,7642,7642	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:131,0,0:131:99:0,394,5471,394,5471,5471	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	./.	./.	0/0:183,0,0:183:99:0,551,7642,551,7642,7642	0/0:156,0,0:156:99:0,470,6515,470,6515,6515	0/0:196,0,0:196:99:0,590,8185,590,8185,8185	2/2:0,0,127:127:99:5304,5304,5304,382,382,0	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	2/2:0,0,96:96:99:4009,4009,4009,289,289,0	2/2:0,0,115:115:99:4802,4802,4802,346,346,0	2/2:0,0,111:111:99:4635,4635,4635,334,334,0	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:155,0,0:155:99:0,467,6473,467,6473,6473	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	0/0:161,0,0:161:99:0,485,6723,485,6723,6723	0/0:180,0,0:180:99:0,542,7517,542,7517,7517	./.	1/1:0,109,0:109:99:4552,328,0,4552,328,4552
gi|293339394|gb|GU595196.1|	59714	.	C	T	5011.26	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.826;DP=2551;Dels=0.00;FS=8.721;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.110;QD=41.76;ReadPosRankSum=2.373;SB=-2088.04	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:174,0:174:99:0,524,7266	0/0:129,0:129:99:0,388,5387	0/0:160,0:160:99:0,482,6682	./.	./.	0/0:166,0:166:99:0,500,6932	0/0:154,0:154:99:0,464,6431	0/0:193,0:193:99:0,581,8060	0/0:68,0:68:99:0,205,2840	0/0:167,0:167:99:0,503,6974	0/0:58,0:58:99:0,175,2422	0/0:75,0:75:99:0,226,3132	0/0:62,0:62:99:0,187,2589	0/0:179,0:179:99:0,539,7475	0/0:155,0:155:99:0,467,6473	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	./.	1/1:0,120:120:99:5011,361,0
gi|293339394|gb|GU595196.1|	59725	.	C	T	5094.78	.	AC=8;AF=0.222;AN=36;BaseQRankSum=1.172;DP=2417;Dels=0.00;FS=1.918;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.147;QD=41.76;ReadPosRankSum=-10.488;SB=-2547.36	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:140,0:140:99:0,421,5846	0/0:164,0:164:99:0,494,6849	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:157,0:157:99:0,473,6556	0/0:185,0:185:99:0,557,7726	1/1:0,35:35:99:1462,105,0	0/0:176,0:176:99:0,530,7350	1/1:0,22:22:66.22:919,66,0	1/1:0,36:36:99:1503,108,0	1/1:0,29:29:87.29:1211,87,0	0/0:171,0:171:99:0,515,7141	0/0:156,0:156:99:0,470,6515	0/0:169,0:169:99:0,509,7057	0/0:155,0:155:99:0,467,6473	0/0:164,0:164:99:0,494,6849	./.	0/0:152,0:152:99:0,458,6348
gi|293339394|gb|GU595196.1|	59736	.	C	A	211.63	.	AC=6;AF=0.176;AN=34;BaseQRankSum=0.137;DP=2361;Dels=0.00;FS=5.586;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8698;MQ=254.00;MQ0=0;MQRankSum=-0.846;QD=30.23;ReadPosRankSum=-4.458;SB=-79.06	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	0/0:142,0:142:99:0,427,5930	0/0:188,0:188:99:0,566,7851	./.	./.	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:186,0:186:99:0,560,7767	1/1:0,1:1:3.01:42,3,0	0/0:180,0:180:99:0,542,7517	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	0/0:181,0:181:99:0,545,7559	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	0/0:164,0:164:99:0,494,6849	./.	0/0:165,0:165:99:0,497,6890
gi|293339394|gb|GU595196.1|	59752	.	A	G	15952.47	.	AC=10;AF=0.278;AN=36;BaseQRankSum=0.220;DP=2586;Dels=0.00;FS=3.911;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.896;QD=41.76;ReadPosRankSum=-6.620;SB=-7809.20	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:138,0:138:99:0,415,5763	0/0:189,0:189:99:0,569,7893	./.	./.	0/0:185,0:185:99:0,557,7726	0/0:177,0:177:99:0,533,7392	0/0:192,0:192:99:0,578,8018	1/1:0,51:51:99:2130,154,0	0/0:163,0:163:99:0,491,6807	1/1:0,48:48:99:2004,144,0	1/1:0,75:75:99:3132,226,0	1/1:0,45:45:99:1879,135,0	0/0:188,0:188:99:0,566,7851	0/0:152,0:152:99:0,458,6348	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	./.	1/1:0,163:163:99:6807,491,0
gi|293339394|gb|GU595196.1|	59813	.	A	G	4217.81	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.773;DP=2997;Dels=0.00;FS=9.777;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.045;QD=41.76;ReadPosRankSum=0.270;SB=-1795.71	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:184,0:184:99:0,554,7684	0/0:116,0:116:99:0,349,4844	0/0:202,0:202:99:0,608,8436	./.	./.	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:154,0:154:99:0,464,6431	0/0:171,0:171:99:0,515,7141	0/0:140,0:140:99:0,421,5846	0/0:182,0:182:99:0,548,7600	0/0:206,0:206:99:0,620,8603	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:176,0:176:99:0,530,7350	0/0:182,0:182:99:0,548,7600	0/0:150,0:150:99:0,452,6264	0/0:170,0:170:99:0,512,7099	./.	1/1:0,101:101:99:4218,304,0
gi|293339394|gb|GU595196.1|	59816	.	A	G	3716.69	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.173;DP=3024;Dels=0.00;FS=8.810;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.467;QD=41.76;ReadPosRankSum=-1.509;SB=-1586.91	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:183,0:183:99:0,551,7642	0/0:126,0:126:99:0,379,5262	0/0:198,0:198:99:0,596,8269	./.	./.	0/0:178,0:178:99:0,536,7433	0/0:185,0:185:99:0,557,7726	0/0:158,0:158:99:0,476,6598	0/0:180,0:180:99:0,542,7517	0/0:141,0:141:99:0,424,5888	0/0:176,0:176:99:0,530,7350	0/0:210,0:210:99:0,632,8770	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:154,0:154:99:0,464,6431	0/0:178,0:178:99:0,536,7433	./.	1/1:0,89:89:99:3717,268,0
gi|293339394|gb|GU595196.1|	59838	.	T	C	2402.87	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.745;DP=2907;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.719;QD=40.73;ReadPosRankSum=0.880;SB=-1211.07	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:163,0:163:99:0,491,6807	0/0:123,0:123:99:0,370,5137	0/0:165,0:165:99:0,497,6890	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:190,0:190:99:0,572,7934	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:180,0:180:99:0,542,7517	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	./.	1/1:0,59:59:99:2464,178,0
gi|293339394|gb|GU595196.1|	59852	.	T	G	2402.87	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.109;DP=2867;Dels=0.00;FS=0.478;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.296;QD=40.73;ReadPosRankSum=8.710;SB=-1211.07	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:122,0:122:99:0,367,5095	0/0:156,0:156:99:0,470,6515	./.	./.	0/0:150,0:150:99:0,452,6264	0/0:175,0:175:99:0,527,7308	0/0:175,0:175:99:0,527,7308	0/0:161,0:161:99:0,485,6723	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:183,0:183:99:0,551,7642	0/0:169,0:169:99:0,509,7057	0/0:179,0:179:99:0,539,7475	./.	1/1:0,59:59:99:2464,178,0
gi|293339394|gb|GU595196.1|	59885	.	T	C	74.19	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.016;DP=2764;Dels=0.00;FS=2.081;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9379;MQ=254.00;MQ0=0;MQRankSum=-0.249;QD=24.73;ReadPosRankSum=-2.969;SB=-39.00	GT:AD:DP:GQ:PL	0/0:196,0:196:99:0,590,8185	0/0:154,0:154:99:0,464,6431	0/0:121,0:121:99:0,364,5053	0/0:161,0:161:99:0,485,6723	./.	./.	0/0:161,0:161:99:0,485,6723	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	0/0:145,0:145:99:0,436,6055	0/0:147,0:147:99:0,442,6139	0/0:144,0:144:99:0,433,6013	0/0:156,0:156:99:0,470,6515	0/0:151,0:151:99:0,455,6306	0/0:170,0:170:99:0,512,7099	0/0:160,0:160:99:0,482,6682	0/0:191,0:191:99:0,575,7976	0/0:171,0:171:99:0,515,7141	0/0:200,0:200:99:0,602,8352	./.	1/1:0,3:3:9.03:125,9,0
gi|293339394|gb|GU595196.1|	59915	.	C	T	4009.01	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.197;DP=2804;Dels=0.00;FS=15.371;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.415;QD=41.76;ReadPosRankSum=2.353;SB=-1586.91	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:174,0:174:99:0,524,7266	0/0:137,0:137:99:0,412,5721	0/0:181,0:181:99:0,545,7559	./.	./.	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:145,0:145:99:0,436,6055	0/0:161,0:161:99:0,485,6723	0/0:123,0:123:99:0,370,5137	0/0:137,0:137:99:0,412,5721	0/0:131,0:131:99:0,394,5471	0/0:151,0:151:99:0,455,6306	0/0:149,0:149:99:0,448,6222	0/0:155,0:155:99:0,467,6473	0/0:181,0:181:99:0,545,7559	0/0:185,0:185:99:0,557,7726	./.	1/1:0,96:96:99:4009,289,0
gi|293339394|gb|GU595196.1|	59948	.	C	G	5220.06	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.914;DP=2799;Dels=0.00;FS=28.842;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.874;QD=41.76;ReadPosRankSum=-0.245;SB=-1879.23	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:131,0:131:99:0,394,5471	0/0:171,0:171:99:0,515,7141	./.	./.	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	0/0:128,0:128:99:0,385,5345	0/0:163,0:163:99:0,491,6807	0/0:151,0:151:99:0,455,6306	0/0:128,0:128:99:0,385,5345	0/0:139,0:139:99:0,418,5805	0/0:151,0:151:99:0,455,6306	0/0:171,0:171:99:0,515,7141	0/0:152,0:152:99:0,458,6348	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	./.	1/1:0,125:125:99:5220,376,0
gi|293339394|gb|GU595196.1|	60064	.	T	A	4510.13	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.056;DP=2907;Dels=0.00;FS=19.801;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.834;QD=41.76;ReadPosRankSum=2.244;SB=-1670.43	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:176,0:176:99:0,530,7350	0/0:117,0:117:99:0,352,4886	0/0:187,0:187:99:0,563,7809	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:172,0:172:99:0,518,7183	0/0:146,0:146:99:0,439,6097	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:184,0:184:99:0,554,7684	0/0:152,0:152:99:0,458,6348	0/0:172,0:172:99:0,518,7183	0/0:138,0:138:99:0,415,5763	0/0:183,0:183:99:0,551,7642	0/0:182,0:182:99:0,548,7600	./.	1/1:0,108:108:99:4510,325,0
gi|293339394|gb|GU595196.1|	60065	.	C	A	4384.85	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.482;DP=2917;Dels=0.00;FS=20.229;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.045;QD=41.76;ReadPosRankSum=2.440;SB=-1628.67	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:178,0:178:99:0,536,7433	0/0:116,0:116:99:0,349,4844	0/0:189,0:189:99:0,569,7893	./.	./.	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:144,0:144:99:0,433,6013	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:186,0:186:99:0,560,7767	0/0:151,0:151:99:0,455,6306	0/0:172,0:172:99:0,518,7183	0/0:139,0:139:99:0,418,5805	0/0:183,0:183:99:0,551,7642	0/0:188,0:188:99:0,566,7851	./.	1/1:0,105:105:99:4385,316,0
gi|293339394|gb|GU595196.1|	60107	.	A	G	3925.49	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.090;DP=2889;Dels=0.00;FS=20.730;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.317;QD=41.76;ReadPosRankSum=1.670;SB=-1419.87	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:169,0:169:99:0,509,7057	0/0:137,0:137:99:0,412,5721	0/0:187,0:187:99:0,563,7809	./.	./.	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:137,0:137:99:0,412,5721	0/0:188,0:188:99:0,566,7851	0/0:192,0:192:99:0,578,8018	0/0:144,0:144:99:0,433,6013	0/0:155,0:155:99:0,467,6473	0/0:161,0:161:99:0,485,6723	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	./.	1/1:0,94:94:99:3925,283,0
gi|293339394|gb|GU595196.1|	60116	.	G	C	4635.42	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.426;DP=2951;Dels=0.00;FS=21.727;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.117;QD=41.76;ReadPosRankSum=1.565;SB=-1753.95	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:142,0:142:99:0,427,5930	0/0:186,0:186:99:0,560,7767	./.	./.	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:136,0:136:99:0,409,5679	0/0:186,0:186:99:0,560,7767	0/0:190,0:190:99:0,572,7934	0/0:145,0:145:99:0,436,6055	0/0:161,0:161:99:0,485,6723	0/0:159,0:159:99:0,479,6640	0/0:180,0:180:99:0,542,7517	0/0:157,0:157:99:0,473,6556	0/0:188,0:188:99:0,566,7851	./.	1/1:0,111:111:99:4635,334,0
gi|293339394|gb|GU595196.1|	60162	.	G	A	565.43	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.766;DP=2805;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.078;QD=37.70;ReadPosRankSum=-4.440;SB=-291.30	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:169,0:169:99:0,509,7057	0/0:123,0:123:99:0,370,5137	0/0:175,0:175:99:0,527,7308	./.	./.	0/0:191,0:191:99:0,575,7976	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:167,0:167:99:0,503,6974	0/0:155,0:155:99:0,467,6473	0/0:150,0:150:99:0,452,6264	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:182,0:182:99:0,548,7600	0/0:151,0:151:99:0,455,6306	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	./.	1/1:0,15:15:45.15:626,45,0
gi|293339394|gb|GU595196.1|	60163	.	T	C	356.91	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.635;DP=2802;Dels=0.00;FS=1.229;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-0.137;QD=35.69;ReadPosRankSum=-3.173;SB=-164.14	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	0/0:125,0:125:99:0,376,5220	0/0:173,0:173:99:0,521,7225	./.	./.	0/0:190,0:190:99:0,572,7934	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:150,0:150:99:0,452,6264	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:184,0:184:99:0,554,7684	0/0:147,0:147:99:0,442,6139	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	./.	1/1:0,10:10:30.10:418,30,0
gi|293339394|gb|GU595196.1|	60199	.	A	T	2402.87	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.754;DP=2839;Dels=0.00;FS=1.580;HRun=0;HaplotypeScore=3.2773;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.302;QD=40.73;ReadPosRankSum=-5.867;SB=-1169.31	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	0/0:129,0:129:99:0,388,5387	0/0:189,0:189:99:0,569,7893	./.	./.	0/0:187,0:187:99:0,563,7809	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	0/0:152,0:152:99:0,458,6348	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	0/0:53,0:53:99:0,160,2213	0/0:194,0:194:99:0,584,8102	0/0:175,0:175:99:0,527,7308	./.	1/1:0,59:59:99:2464,178,0
gi|293339394|gb|GU595196.1|	60200	.	G	A	588.37	.	AC=1;AF=0.028;AN=36;BaseQRankSum=-0.777;DP=2860;Dels=0.00;FS=4.463;HRun=6;HaplotypeScore=3.6106;InbreedingCoeff=-0.0286;MQ=254.00;MQ0=0;MQRankSum=-0.351;QD=10.90;ReadPosRankSum=-5.481;SB=-214.08	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:167,0:167:99:0,503,6974	0/0:132,0:132:99:0,397,5512	0/0:190,0:190:99:0,572,7934	./.	./.	0/0:190,0:190:99:0,572,7934	0/0:180,0:180:99:0,542,7517	0/0:173,0:173:99:0,521,7225	0/0:183,0:183:99:0,551,7642	0/0:180,0:180:99:0,542,7517	0/0:152,0:152:99:0,458,6348	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/1:35,19:54:99:631,0,1299	0/0:194,0:194:99:0,584,8102	0/0:179,0:179:99:0,539,7475	./.	0/0:61,0:61:99:0,184,2547
gi|293339394|gb|GU595196.1|	60201	.	A	G	674.90	.	AC=1;AF=0.028;AN=36;BaseQRankSum=-0.660;DP=2885;Dels=0.00;FS=7.266;HRun=1;HaplotypeScore=3.7217;InbreedingCoeff=-0.0286;MQ=254.00;MQ0=0;MQRankSum=0.299;QD=12.73;ReadPosRankSum=-5.262;SB=-214.08	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:169,0:169:99:0,509,7057	0/0:134,0:134:99:0,403,5596	0/0:191,0:191:99:0,575,7976	./.	./.	0/0:192,0:192:99:0,578,8018	0/0:186,0:186:99:0,560,7767	0/0:174,0:174:99:0,524,7266	0/0:181,0:181:99:0,545,7559	0/0:178,0:178:99:0,536,7433	0/0:153,0:153:99:0,461,6389	0/0:182,0:182:99:0,548,7600	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/1:32,21:53:99:717,0,1177	0/0:194,0:194:99:0,584,8102	0/0:174,0:174:99:0,524,7266	./.	0/0:63,0:63:99:0,190,2631
gi|293339394|gb|GU595196.1|	60203	.	A	C	695.97	.	AC=1;AF=0.028;AN=36;BaseQRankSum=-0.529;DP=2859;Dels=0.00;FS=0.000;HRun=3;HaplotypeScore=3.7217;InbreedingCoeff=-0.0286;MQ=254.00;MQ0=0;MQRankSum=0.529;QD=15.13;ReadPosRankSum=-6.666;SB=-360.43	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:166,0:166:99:0,500,6932	0/0:128,0:128:99:0,385,5345	0/0:187,0:187:99:0,563,7809	./.	./.	0/0:194,0:194:99:0,584,8102	0/0:189,0:189:99:0,569,7893	0/0:172,0:172:99:0,518,7183	0/0:182,0:182:99:0,548,7600	0/0:179,0:179:99:0,539,7475	0/0:148,0:148:99:0,445,6181	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/1:25,21:46:99:739,0,906	0/0:195,0:195:99:0,587,8143	0/0:172,0:172:99:0,518,7183	./.	0/0:69,0:69:99:0,208,2881
gi|293339394|gb|GU595196.1|	60206	.	C	T	96.66	.	AC=1;AF=0.028;AN=36;BaseQRankSum=-0.041;DP=2872;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=2.8885;InbreedingCoeff=-0.0286;MQ=254.00;MQ0=0;MQRankSum=-0.089;QD=2.61;ReadPosRankSum=-3.971;SB=-62.09	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:167,0:167:99:0,503,6974	0/0:131,0:131:99:0,394,5471	0/0:182,0:182:99:0,548,7600	./.	./.	0/0:195,0:195:99:0,587,8143	0/0:193,0:193:99:0,581,8060	0/0:164,0:164:99:0,494,6849	0/0:178,0:178:99:0,536,7433	0/0:183,0:183:99:0,551,7642	0/0:157,0:157:99:0,473,6556	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/1:31,6:37:99:139,0,1183	0/0:197,0:197:99:0,593,8227	0/0:169,0:169:99:0,509,7057	./.	0/0:88,0:88:99:0,265,3675
gi|293339394|gb|GU595196.1|	60212	.	A	G	4468.37	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.377;DP=2919;Dels=0.00;FS=3.090;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.286;QD=41.76;ReadPosRankSum=1.701;SB=-2088.04	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:124,0:124:99:0,373,5178	0/0:179,0:179:99:0,539,7475	./.	./.	0/0:192,0:192:99:0,578,8018	0/0:191,0:191:99:0,575,7976	0/0:153,0:153:99:0,461,6389	0/0:183,0:183:99:0,551,7642	0/0:183,0:183:99:0,551,7642	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:178,0:178:99:0,536,7433	0/0:54,0:54:99:0,163,2255	0/0:202,0:202:99:0,608,8436	0/0:169,0:169:99:0,509,7057	./.	1/1:0,107:107:99:4468,322,0
gi|293339394|gb|GU595196.1|	60266	.	A	G	7057.52	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.262;DP=3000;Dels=0.00;FS=1.974;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.047;QD=41.76;ReadPosRankSum=0.633;SB=-3340.85	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:117,0:117:99:0,352,4886	0/0:171,0:171:99:0,515,7141	./.	./.	0/0:201,0:201:99:0,605,8394	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	0/0:190,0:190:99:0,572,7934	0/0:175,0:175:99:0,527,7308	0/0:177,0:177:99:0,533,7392	0/0:146,0:146:99:0,439,6097	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	./.	1/1:0,169:169:99:7057,509,0
gi|293339394|gb|GU595196.1|	60289	.	C	A	6681.67	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.480;DP=3008;Dels=0.00;FS=16.432;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.239;QD=41.76;ReadPosRankSum=-0.611;SB=-2714.44	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:129,0:129:99:0,388,5387	0/0:177,0:177:99:0,533,7392	./.	./.	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:180,0:180:99:0,542,7517	0/0:181,0:181:99:0,545,7559	0/0:200,0:200:99:0,602,8352	0/0:153,0:153:99:0,461,6389	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	0/0:175,0:175:99:0,527,7308	0/0:156,0:156:99:0,470,6515	0/0:151,0:151:99:0,455,6306	0/0:161,0:161:99:0,485,6723	./.	1/1:0,160:160:99:6682,482,0
gi|293339394|gb|GU595196.1|	60313	.	T	C	6598.15	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.068;DP=2911;Dels=0.00;FS=36.743;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.469;QD=41.76;ReadPosRankSum=2.091;SB=-2255.08	GT:AD:DP:GQ:PL	0/0:147,0:147:99:0,442,6139	0/0:150,0:150:99:0,452,6264	0/0:116,0:116:99:0,349,4844	0/0:179,0:179:99:0,539,7475	./.	./.	0/0:158,0:158:99:0,476,6598	0/0:161,0:161:99:0,485,6723	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:156,0:156:99:0,470,6515	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	./.	1/1:0,158:158:99:6598,476,0
gi|293339394|gb|GU595196.1|	60358	.	G	A	4551.90	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.997;DP=2895;Dels=0.00;FS=44.502;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.315;QD=41.76;ReadPosRankSum=3.771;SB=-1378.11	GT:AD:DP:GQ:PL	0/0:145,0:145:99:0,436,6055	0/0:152,0:152:99:0,458,6348	0/0:124,0:124:99:0,373,5178	0/0:176,0:176:99:0,530,7350	./.	./.	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	0/0:184,0:184:99:0,554,7684	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:153,0:153:99:0,461,6389	0/0:143,0:143:99:0,430,5972	0/0:178,0:178:99:0,536,7433	0/0:196,0:196:99:0,590,8185	./.	1/1:0,109:109:99:4552,328,0
gi|293339394|gb|GU595196.1|	60363	.	A	T	4551.90	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.362;DP=2906;Dels=0.00;FS=32.417;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.930;QD=41.76;ReadPosRankSum=0.706;SB=-1503.39	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:157,0:157:99:0,473,6556	0/0:120,0:120:99:0,361,5011	0/0:169,0:169:99:0,509,7057	./.	./.	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:181,0:181:99:0,545,7559	0/0:181,0:181:99:0,545,7559	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:177,0:177:99:0,533,7392	0/0:153,0:153:99:0,461,6389	0/0:152,0:152:99:0,458,6348	0/0:177,0:177:99:0,533,7392	0/0:190,0:190:99:0,572,7934	./.	1/1:0,109:109:99:4552,328,0
gi|293339394|gb|GU595196.1|	60394	.	A	T	3841.97	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.299;DP=2888;Dels=0.00;FS=0.794;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.402;QD=41.76;ReadPosRankSum=3.821;SB=-1837.47	GT:AD:DP:GQ:PL	0/0:137,0:137:99:0,412,5721	0/0:173,0:173:99:0,521,7225	0/0:114,0:114:99:0,343,4761	0/0:171,0:171:99:0,515,7141	./.	./.	0/0:189,0:189:99:0,569,7893	0/0:162,0:162:99:0,488,6765	0/0:156,0:156:99:0,470,6515	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:151,0:151:99:0,455,6306	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	./.	1/1:0,92:92:99:3842,277,0
gi|293339394|gb|GU595196.1|	60421	.	G	A	4760.70	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.184;DP=2970;Dels=0.00;FS=2.466;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.783;QD=41.76;ReadPosRankSum=1.276;SB=-2255.08	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:116,0:116:99:0,349,4844	0/0:176,0:176:99:0,530,7350	./.	./.	0/0:189,0:189:99:0,569,7893	0/0:177,0:177:99:0,533,7392	0/0:158,0:158:99:0,476,6598	0/0:179,0:179:99:0,539,7475	0/0:154,0:154:99:0,464,6431	0/0:185,0:185:99:0,557,7726	0/0:172,0:172:99:0,518,7183	0/0:177,0:177:99:0,533,7392	0/0:191,0:191:99:0,575,7976	0/0:160,0:160:99:0,482,6682	0/0:150,0:150:99:0,452,6264	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	./.	1/1:0,114:114:99:4761,343,0
gi|293339394|gb|GU595196.1|	60448	.	T	C	4969.50	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.280;DP=2978;Dels=0.00;FS=14.004;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.018;QD=41.76;ReadPosRankSum=-0.651;SB=-2088.04	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:129,0:129:99:0,388,5387	0/0:163,0:163:99:0,491,6807	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:163,0:163:99:0,491,6807	0/0:144,0:144:99:0,433,6013	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	0/0:187,0:187:99:0,563,7809	0/0:159,0:159:99:0,479,6640	0/0:180,0:180:99:0,542,7517	0/0:197,0:197:99:0,593,8227	0/0:162,0:162:99:0,488,6765	0/0:144,0:144:99:0,433,6013	0/0:183,0:183:99:0,551,7642	0/0:178,0:178:99:0,536,7433	./.	1/1:0,119:119:99:4969,358,0
gi|293339394|gb|GU595196.1|	60467	.	T	C	5011.26	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.711;DP=3015;Dels=0.00;FS=35.780;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.025;QD=41.76;ReadPosRankSum=-0.218;SB=-1712.19	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:191,0:191:99:0,575,7976	0/0:124,0:124:99:0,373,5178	0/0:150,0:150:99:0,452,6264	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	0/0:183,0:183:99:0,551,7642	0/0:180,0:180:99:0,542,7517	0/0:190,0:190:99:0,572,7934	0/0:182,0:182:99:0,548,7600	0/0:179,0:179:99:0,539,7475	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:149,0:149:99:0,448,6222	0/0:200,0:200:99:0,602,8352	0/0:168,0:168:99:0,506,7016	./.	1/1:0,120:120:99:5011,361,0
gi|293339394|gb|GU595196.1|	60535	.	A	G	6598.15	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.369;DP=3032;Dels=0.00;FS=27.311;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.496;QD=41.76;ReadPosRankSum=0.241;SB=-2422.12	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:180,0:180:99:0,542,7517	0/0:121,0:121:99:0,364,5053	0/0:152,0:152:99:0,458,6348	./.	./.	0/0:184,0:184:99:0,554,7684	0/0:170,0:170:99:0,512,7099	0/0:147,0:147:99:0,442,6139	0/0:180,0:180:99:0,542,7517	0/0:188,0:188:99:0,566,7851	0/0:178,0:178:99:0,536,7433	0/0:162,0:162:99:0,488,6765	0/0:197,0:197:99:0,593,8227	0/0:164,0:164:99:0,494,6849	0/0:152,0:152:99:0,458,6348	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	./.	1/1:0,158:158:99:6598,476,0
gi|293339394|gb|GU595196.1|	60565	.	C	T	7475.12	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.580;DP=3044;Dels=0.00;FS=3.111;HRun=2;HaplotypeScore=7.4435;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.130;QD=41.76;ReadPosRankSum=0.215;SB=-3633.17	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:125,0:125:99:0,376,5220	0/0:176,0:176:99:0,530,7350	./.	./.	1/1:0,179:179:99:7475,539,0	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:194,0:194:99:0,584,8102	0/0:176,0:176:99:0,530,7350	0/0:189,0:189:99:0,569,7893	0/0:180,0:180:99:0,542,7517	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:150,0:150:99:0,452,6264	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:183,0:183:99:0,551,7642	./.	0/0:164,0:164:99:0,494,6849
gi|293339394|gb|GU595196.1|	60574	.	C	T	7141.04	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.006;DP=3047;Dels=0.00;FS=0.580;HRun=1;HaplotypeScore=8.2211;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.794;QD=41.76;ReadPosRankSum=0.769;SB=-3507.89	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:177,0:177:99:0,533,7392	0/0:129,0:129:99:0,388,5387	0/0:176,0:176:99:0,530,7350	./.	./.	0/0:175,0:175:99:0,527,7308	0/0:153,0:153:99:0,461,6389	0/0:166,0:166:99:0,500,6932	0/0:193,0:193:99:0,581,8060	0/0:164,0:164:99:0,494,6849	0/0:191,0:191:99:0,575,7976	0/0:188,0:188:99:0,566,7851	0/0:159,0:159:99:0,479,6640	0/0:153,0:153:99:0,461,6389	0/0:149,0:149:99:0,448,6222	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:181,0:181:99:0,545,7559	./.	1/1:0,171:171:99:7141,515,0
gi|293339394|gb|GU595196.1|	60590	.	T	A	7099.28	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.448;DP=3055;Dels=0.00;FS=4.141;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.322;QD=41.76;ReadPosRankSum=1.763;SB=-3424.37	GT:AD:DP:GQ:PL	0/0:190,0:190:99:0,572,7934	0/0:170,0:170:99:0,512,7099	0/0:132,0:132:99:0,397,5512	0/0:182,0:182:99:0,548,7600	./.	./.	0/0:196,0:196:99:0,590,8185	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:175,0:175:99:0,527,7308	0/0:164,0:164:99:0,494,6849	0/0:195,0:195:99:0,587,8143	0/0:191,0:191:99:0,575,7976	0/0:155,0:155:99:0,467,6473	0/0:147,0:147:99:0,442,6139	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	./.	1/1:0,170:170:99:7099,512,0
gi|293339394|gb|GU595196.1|	60634	.	T	G	30944.43	.	AC=10;AF=0.278;AN=36;BaseQRankSum=1.358;DP=2887;Dels=0.00;FS=1.348;HRun=0;HaplotypeScore=1.9442;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.713;QD=41.76;ReadPosRankSum=-2.540;SB=-15409.58	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:161,0:161:99:0,485,6723	0/0:136,0:136:99:0,409,5679	0/0:182,0:182:99:0,548,7600	./.	./.	0/0:195,0:195:99:0,587,8143	0/0:161,0:161:99:0,485,6723	0/0:143,0:143:99:0,430,5972	1/1:0,164:164:99:6849,494,0	0/0:178,0:178:99:0,536,7433	1/1:0,197:197:99:8227,593,0	1/1:0,167:167:99:6974,503,0	1/1:0,167:167:99:6974,503,0	0/0:185,0:185:99:0,557,7726	0/0:134,0:134:99:0,403,5596	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	./.	1/1:0,46:46:99:1921,138,0
gi|293339394|gb|GU595196.1|	60636	.	C	A	1818.23	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.079;DP=2894;Dels=0.00;FS=6.321;HRun=1;HaplotypeScore=2.4997;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.518;QD=40.41;ReadPosRankSum=-4.104;SB=-751.70	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:161,0:161:99:0,485,6723	0/0:135,0:135:99:0,406,5638	0/0:184,0:184:99:0,554,7684	./.	./.	0/0:197,0:197:99:0,593,8227	0/0:161,0:161:99:0,485,6723	0/0:145,0:145:99:0,436,6055	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:198,0:198:99:0,596,8269	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:187,0:187:99:0,563,7809	0/0:135,0:135:99:0,406,5638	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:176,0:176:99:0,530,7350	./.	1/1:0,45:45:99:1879,135,0
gi|293339394|gb|GU595196.1|	60648	.	C	A	12987.48	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.196;DP=2913;Dels=0.00;FS=13.209;HRun=1;HaplotypeScore=3.1107;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.553;QD=41.76;ReadPosRankSum=-0.082;SB=-6055.27	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	1/1:0,129:129:99:5387,388,0	1/1:0,182:182:99:7600,548,0	./.	./.	0/0:185,0:185:99:0,557,7726	0/0:170,0:170:99:0,512,7099	0/0:143,0:143:99:0,430,5972	0/0:153,0:153:99:0,461,6389	0/0:167,0:167:99:0,503,6974	0/0:186,0:186:99:0,560,7767	0/0:163,0:163:99:0,491,6807	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:155,0:155:99:0,467,6473	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:180,0:180:99:0,542,7517	./.	0/0:69,0:69:99:0,208,2881
gi|293339394|gb|GU595196.1|	60652	.	C	T	2277.59	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.365;DP=2918;Dels=0.00;FS=2.284;HRun=0;HaplotypeScore=3.1107;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.785;QD=40.67;ReadPosRankSum=-0.974;SB=-1044.03	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:133,0:133:99:0,400,5554	0/0:173,0:173:99:0,521,7225	./.	./.	0/0:186,0:186:99:0,560,7767	0/0:169,0:169:99:0,509,7057	0/0:148,0:148:99:0,445,6181	0/0:146,0:146:99:0,439,6097	0/0:168,0:168:99:0,506,7016	0/0:185,0:185:99:0,557,7726	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	0/0:196,0:196:99:0,590,8185	0/0:145,0:145:99:0,436,6055	0/0:175,0:175:99:0,527,7308	0/0:185,0:185:99:0,557,7726	0/0:186,0:186:99:0,560,7767	./.	1/1:0,56:56:99:2339,169,0
gi|293339394|gb|GU595196.1|	60696	.	T	A	1191.83	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.038;DP=2833;Dels=0.00;FS=34.822;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.549;QD=39.73;ReadPosRankSum=-2.611;SB=-208.82	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:208,0:208:99:0,626,8686	0/0:131,0:131:99:0,394,5471	0/0:133,0:133:99:0,400,5554	./.	./.	0/0:171,0:171:99:0,515,7141	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:150,0:150:99:0,452,6264	0/0:154,0:154:99:0,464,6431	0/0:151,0:151:99:0,455,6306	0/0:181,0:181:99:0,545,7559	0/0:157,0:157:99:0,473,6556	0/0:164,0:164:99:0,494,6849	0/0:186,0:186:99:0,560,7767	0/0:167,0:167:99:0,503,6974	./.	1/1:0,30:30:90.30:1253,90,0
gi|293339394|gb|GU595196.1|	60697	.	G	T	941.26	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.877;DP=2832;Dels=0.00;FS=28.081;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.884;QD=39.22;ReadPosRankSum=-1.507;SB=-167.06	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:208,0:208:99:0,626,8686	0/0:127,0:127:99:0,382,5304	0/0:133,0:133:99:0,400,5554	./.	./.	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	0/0:169,0:169:99:0,509,7057	0/0:152,0:152:99:0,458,6348	0/0:151,0:151:99:0,455,6306	0/0:151,0:151:99:0,455,6306	0/0:187,0:187:99:0,563,7809	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	0/0:188,0:188:99:0,566,7851	0/0:165,0:165:99:0,497,6890	./.	1/1:0,24:24:72.24:1002,72,0
gi|293339394|gb|GU595196.1|	60733	.	A	G	1024.78	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.257;DP=2746;Dels=0.00;FS=25.739;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.353;QD=39.41;ReadPosRankSum=-3.402;SB=-208.82	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:179,0:179:99:0,539,7475	0/0:122,0:122:99:0,367,5095	0/0:127,0:127:99:0,382,5304	./.	./.	0/0:194,0:194:99:0,584,8102	0/0:156,0:156:99:0,470,6515	0/0:187,0:187:99:0,563,7809	0/0:153,0:153:99:0,461,6389	0/0:160,0:160:99:0,482,6682	0/0:142,0:142:99:0,427,5930	0/0:146,0:146:99:0,439,6097	0/0:135,0:135:99:0,406,5638	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:191,0:191:99:0,575,7976	./.	1/1:0,26:26:78.26:1086,78,0
gi|293339394|gb|GU595196.1|	60749	.	C	A	2027.03	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.055;DP=2746;Dels=0.00;FS=46.756;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.652;QD=40.54;ReadPosRankSum=2.335;SB=-375.86	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:161,0:161:99:0,485,6723	0/0:109,0:109:99:0,328,4552	0/0:134,0:134:99:0,403,5596	./.	./.	0/0:193,0:193:99:0,581,8060	0/0:154,0:154:99:0,464,6431	0/0:181,0:181:99:0,545,7559	0/0:155,0:155:99:0,467,6473	0/0:157,0:157:99:0,473,6556	0/0:150,0:150:99:0,452,6264	0/0:148,0:148:99:0,445,6181	0/0:135,0:135:99:0,406,5638	0/0:162,0:162:99:0,488,6765	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:150,0:150:99:0,452,6264	0/0:177,0:177:99:0,533,7392	./.	1/1:0,50:50:99:2088,151,0
gi|293339394|gb|GU595196.1|	60796	.	C	T	4092.53	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.009;DP=2797;Dels=0.00;FS=85.923;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.365;QD=41.76;ReadPosRankSum=1.847;SB=-668.18	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:179,0:179:99:0,539,7475	0/0:116,0:116:99:0,349,4844	0/0:175,0:175:99:0,527,7308	./.	./.	0/0:191,0:191:99:0,575,7976	0/0:156,0:156:99:0,470,6515	0/0:156,0:156:99:0,470,6515	0/0:141,0:141:99:0,424,5888	0/0:160,0:160:99:0,482,6682	0/0:164,0:164:99:0,494,6849	0/0:148,0:148:99:0,445,6181	0/0:123,0:123:99:0,370,5137	0/0:147,0:147:99:0,442,6139	0/0:170,0:170:99:0,512,7099	0/0:158,0:158:99:0,476,6598	0/0:188,0:188:99:0,566,7851	0/0:145,0:145:99:0,436,6055	./.	1/1:0,98:98:99:4093,295,0
gi|293339394|gb|GU595196.1|	60851	.	G	A	2945.76	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.080;DP=2908;Dels=0.00;FS=37.487;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.149;QD=40.91;ReadPosRankSum=-0.260;SB=-793.47	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:162,0:162:99:0,488,6765	0/0:122,0:122:99:0,367,5095	0/0:161,0:161:99:0,485,6723	./.	./.	0/0:174,0:174:99:0,524,7266	0/0:153,0:153:99:0,461,6389	0/0:166,0:166:99:0,500,6932	0/0:156,0:156:99:0,470,6515	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	0/0:175,0:175:99:0,527,7308	0/0:137,0:137:99:0,412,5721	0/0:208,0:208:99:0,626,8686	0/0:155,0:155:99:0,467,6473	0/0:183,0:183:99:0,551,7642	0/0:187,0:187:99:0,563,7809	0/0:178,0:178:99:0,536,7433	./.	1/1:0,72:72:99:3007,217,0
gi|293339394|gb|GU595196.1|	60925	.	G	A	33491.81	.	AC=12;AF=0.353;AN=34;BaseQRankSum=-1.058;DP=2671;Dels=0.00;FS=1.922;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.135;QD=41.76;ReadPosRankSum=5.238;SB=-16704.15	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:181,0:181:99:0,545,7559	1/1:0,113:113:99:4719,340,0	1/1:0,133:133:99:5554,400,0	./.	./.	0/0:197,0:197:99:0,593,8227	0/0:180,0:180:99:0,542,7517	0/0:174,0:174:99:0,524,7266	1/1:0,136:136:99:5679,409,0	0/0:174,0:174:99:0,524,7266	1/1:0,130:130:99:5429,391,0	1/1:0,145:145:99:6055,436,0	1/1:0,145:145:99:6055,436,0	0/0:177,0:177:99:0,533,7392	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:151,0:151:99:0,455,6306	0/0:163,0:163:99:0,491,6807	./.	./.
gi|293339394|gb|GU595196.1|	60964	.	C	A	6097.03	.	AC=12;AF=0.353;AN=34;BaseQRankSum=1.629;DP=1993;Dels=0.00;FS=5.178;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-1.640;QD=41.76;ReadPosRankSum=-6.402;SB=-2714.35	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:190,0:190:99:0,572,7934	1/1:0,8:8:24.08:334,24,0	1/1:0,25:25:75.25:1044,75,0	./.	./.	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:162,0:162:99:0,488,6765	1/1:0,21:21:63.21:877,63,0	0/0:168,0:168:99:0,506,7016	1/1:0,32:32:96.32:1336,96,0	1/1:0,31:31:93.31:1295,93,0	1/1:0,29:29:87.29:1211,87,0	0/0:155,0:155:99:0,467,6473	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:167,0:167:99:0,503,6974	./.	./.
gi|293339394|gb|GU595196.1|	60967	.	A	G	3633.17	.	AC=12;AF=0.353;AN=34;BaseQRankSum=-0.184;DP=1921;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9924;MQ=254.00;MQ0=0;MQRankSum=-0.567;QD=41.76;ReadPosRankSum=-3.023;SB=-1752.44	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	1/1:0,4:4:12.04:167,12,0	1/1:0,14:14:42.14:585,42,0	./.	./.	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	1/1:0,14:14:42.14:585,42,0	0/0:166,0:166:99:0,500,6932	1/1:0,16:16:48.16:668,48,0	1/1:0,23:23:69.23:960,69,0	1/1:0,16:16:48.16:668,48,0	0/0:160,0:160:99:0,482,6682	0/0:154,0:154:99:0,464,6431	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	./.	./.
gi|293339394|gb|GU595196.1|	60975	.	A	G	479.55	.	AC=5;AF=0.147;AN=34;BaseQRankSum=0.353;DP=1951;Dels=0.00;FS=0.000;HRun=4;HaplotypeScore=1.2351;InbreedingCoeff=-0.1853;MQ=254.00;MQ0=0;MQRankSum=-1.638;QD=5.16;ReadPosRankSum=-7.673;SB=-285.79	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/1:4,2:6:65.46:65,0,149	0/0:14,1:15:3.39:0,3,543	./.	./.	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:156,0:156:99:0,470,6515	0/1:14,3:17:74.11:74,0,533	0/0:169,0:169:99:0,509,7057	0/1:16,5:21:99:146,0,605	0/1:23,7:30:99:202,0,870	0/1:16,3:19:68.09:68,0,611	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	./.	./.
gi|293339394|gb|GU595196.1|	60996	.	T	C	18792.17	.	AC=12;AF=0.353;AN=34;BaseQRankSum=0.311;DP=2300;Dels=0.00;FS=3.356;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.477;QD=41.76;ReadPosRankSum=-3.399;SB=-8936.73	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:171,0:171:99:0,515,7141	1/1:0,66:66:99:2756,199,0	1/1:0,87:87:99:3633,262,0	./.	./.	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:157,0:157:99:0,473,6556	1/1:0,65:65:99:2714,196,0	0/0:165,0:165:99:0,497,6890	1/1:0,81:81:99:3383,244,0	1/1:0,80:80:99:3341,241,0	1/1:0,71:71:99:2965,214,0	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:191,0:191:99:0,575,7976	0/0:148,0:148:99:0,445,6181	./.	./.
gi|293339394|gb|GU595196.1|	61008	.	G	A	74.19	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.661;DP=2555;Dels=0.00;FS=6.015;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9379;MQ=254.00;MQ0=0;MQRankSum=0.553;QD=24.73;ReadPosRankSum=-0.479;SB=-0.02	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:164,0:164:99:0,494,6849	0/0:99,0:99:99:0,298,4134	0/0:135,0:135:99:0,406,5638	./.	./.	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:104,0:104:99:0,313,4343	0/0:169,0:169:99:0,509,7057	0/0:122,0:122:99:0,367,5095	0/0:123,0:123:99:0,370,5137	0/0:97,0:97:99:0,292,4051	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:165,0:165:99:0,497,6890	0/0:204,0:204:99:0,614,8519	0/0:150,0:150:99:0,452,6264	./.	1/1:0,3:3:9.03:125,9,0
gi|293339394|gb|GU595196.1|	61012	.	T	A	74.19	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.019;DP=2623;Dels=0.00;FS=6.017;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9379;MQ=254.00;MQ0=0;MQRankSum=0.165;QD=24.73;ReadPosRankSum=0.468;SB=-0.02	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:160,0:160:99:0,482,6682	0/0:116,0:116:99:0,349,4844	0/0:145,0:145:99:0,436,6055	./.	./.	0/0:171,0:171:99:0,515,7141	0/0:154,0:154:99:0,464,6431	0/0:167,0:167:99:0,503,6974	0/0:118,0:118:99:0,355,4928	0/0:158,0:158:99:0,476,6598	0/0:139,0:139:99:0,418,5805	0/0:130,0:130:99:0,391,5429	0/0:111,0:111:99:0,334,4635	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:198,0:198:99:0,596,8269	0/0:157,0:157:99:0,473,6556	./.	1/1:0,3:3:9.03:125,9,0
gi|293339394|gb|GU595196.1|	61047	.	C	A	2736.96	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.443;DP=2878;Dels=0.00;FS=6.638;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.120;QD=40.85;ReadPosRankSum=8.222;SB=-1169.31	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:171,0:171:99:0,515,7141	0/0:121,0:121:99:0,364,5053	0/0:188,0:188:99:0,566,7851	./.	./.	0/0:160,0:160:99:0,482,6682	0/0:154,0:154:99:0,464,6431	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:143,0:143:99:0,430,5972	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	0/0:152,0:152:99:0,458,6348	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:157,0:157:99:0,473,6556	0/0:198,0:198:99:0,596,8269	0/0:157,0:157:99:0,473,6556	./.	1/1:0,67:67:99:2798,202,0
gi|293339394|gb|GU595196.1|	61052	.	A	T	2736.96	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.061;DP=2860;Dels=0.00;FS=6.651;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.614;QD=40.85;ReadPosRankSum=7.307;SB=-1169.31	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:111,0:111:99:0,334,4635	0/0:186,0:186:99:0,560,7767	./.	./.	0/0:158,0:158:99:0,476,6598	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:138,0:138:99:0,415,5763	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	0/0:157,0:157:99:0,473,6556	0/0:186,0:186:99:0,560,7767	0/0:163,0:163:99:0,491,6807	./.	1/1:0,67:67:99:2798,202,0
gi|293339394|gb|GU595196.1|	61120	.	T	G	32322.52	.	AC=12;AF=0.353;AN=34;BaseQRankSum=0.627;DP=2627;Dels=0.00;FS=22.139;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.452;QD=41.76;ReadPosRankSum=-0.301;SB=-14156.77	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:169,0:169:99:0,509,7057	1/1:0,93:93:99:3884,280,0	1/1:0,146:146:99:6097,439,0	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:151,0:151:99:0,455,6306	0/0:186,0:186:99:0,560,7767	1/1:0,121:121:99:5053,364,0	0/0:183,0:183:99:0,551,7642	1/1:0,141:141:99:5888,424,0	1/1:0,143:143:99:5972,430,0	1/1:0,130:130:99:5429,391,0	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:161,0:161:99:0,485,6723	./.	./.
gi|293339394|gb|GU595196.1|	61213	.	C	T	1651.19	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.896;DP=2778;Dels=0.00;FS=15.814;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.250;QD=40.27;ReadPosRankSum=-2.266;SB=-501.14	GT:AD:DP:GQ:PL	0/0:191,0:191:99:0,575,7976	0/0:177,0:177:99:0,533,7392	0/0:103,0:103:99:0,310,4301	0/0:139,0:139:99:0,418,5805	./.	./.	0/0:197,0:197:99:0,593,8227	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:141,0:141:99:0,424,5888	0/0:195,0:195:99:0,587,8143	0/0:146,0:146:99:0,439,6097	0/0:133,0:133:99:0,400,5554	0/0:146,0:146:99:0,439,6097	0/0:153,0:153:99:0,461,6389	0/0:179,0:179:99:0,539,7475	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	./.	1/1:0,41:41:99:1712,123,0
gi|293339394|gb|GU595196.1|	61226	.	T	C	2778.72	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.247;DP=2758;Dels=0.00;FS=30.716;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.600;QD=40.86;ReadPosRankSum=2.530;SB=-793.47	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:179,0:179:99:0,539,7475	0/0:112,0:112:99:0,337,4677	0/0:152,0:152:99:0,458,6348	./.	./.	0/0:137,0:137:99:0,412,5721	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:146,0:146:99:0,439,6097	0/0:186,0:186:99:0,560,7767	0/0:157,0:157:99:0,473,6556	0/0:143,0:143:99:0,430,5972	0/0:145,0:145:99:0,436,6055	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:153,0:153:99:0,461,6389	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	./.	1/1:0,68:68:99:2840,205,0
gi|293339394|gb|GU595196.1|	61250	.	T	C	39505.29	.	AC=14;AF=0.389;AN=36;BaseQRankSum=1.106;DP=2704;Dels=0.00;FS=13.605;HRun=1;HaplotypeScore=2.1108;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.176;QD=41.76;ReadPosRankSum=-0.682;SB=-17915.20	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:175,0:175:99:0,527,7308	1/1:0,117:117:99:4886,352,0	1/1:0,171:171:99:7141,515,0	./.	./.	1/1:0,45:45:99:1879,135,0	0/0:156,0:156:99:0,470,6515	0/0:163,0:163:99:0,491,6807	1/1:0,165:165:99:6890,497,0	0/0:193,0:193:99:0,581,8060	1/1:0,156:156:99:6515,470,0	1/1:0,153:153:99:6389,461,0	1/1:0,139:139:99:5805,418,0	0/0:140,0:140:99:0,421,5846	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:183,0:183:99:0,551,7642	./.	0/0:92,0:92:99:0,277,3842
gi|293339394|gb|GU595196.1|	61252	.	T	A	1776.47	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.959;DP=2740;Dels=0.00;FS=7.660;HRun=0;HaplotypeScore=2.4441;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.941;QD=40.37;ReadPosRankSum=-7.143;SB=-751.70	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:176,0:176:99:0,530,7350	0/0:120,0:120:99:0,361,5011	0/0:175,0:175:99:0,527,7308	./.	./.	1/1:0,44:44:99:1837,132,0	0/0:153,0:153:99:0,461,6389	0/0:166,0:166:99:0,500,6932	0/0:161,0:161:99:0,485,6723	0/0:198,0:198:99:0,596,8269	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	0/0:138,0:138:99:0,415,5763	0/0:141,0:141:99:0,424,5888	0/0:178,0:178:99:0,536,7433	0/0:172,0:172:99:0,518,7183	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	./.	0/0:94,0:94:99:0,283,3925
gi|293339394|gb|GU595196.1|	61262	.	C	A	40507.54	.	AC=14;AF=0.389;AN=36;BaseQRankSum=-0.980;DP=2708;Dels=0.00;FS=10.716;HRun=0;HaplotypeScore=0.3333;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.274;QD=41.76;ReadPosRankSum=-0.516;SB=-18708.65	GT:AD:DP:GQ:PL	0/0:142,0:142:99:0,427,5930	0/0:170,0:170:99:0,512,7099	1/1:0,119:119:99:4969,358,0	1/1:0,185:185:99:7726,557,0	./.	./.	1/1:0,42:42:99:1754,126,0	0/0:147,0:147:99:0,442,6139	0/0:170,0:170:99:0,512,7099	1/1:0,165:165:99:6890,497,0	0/0:182,0:182:99:0,548,7600	1/1:0,154:154:99:6431,464,0	1/1:0,161:161:99:6723,485,0	1/1:0,144:144:99:6013,433,0	0/0:159,0:159:99:0,479,6640	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	./.	0/0:92,0:92:99:0,277,3842
gi|293339394|gb|GU595196.1|	61278	.	T	C	3549.65	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.142;DP=2746;Dels=0.00;FS=148.089;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.093;QD=41.76;ReadPosRankSum=0.710;SB=-334.10	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:156,0:156:99:0,470,6515	0/0:106,0:106:99:0,319,4427	0/0:175,0:175:99:0,527,7308	./.	./.	0/0:99,0:99:99:0,298,4134	0/0:144,0:144:99:0,433,6013	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:155,0:155:99:0,467,6473	0/0:156,0:156:99:0,470,6515	0/0:152,0:152:99:0,458,6348	0/0:174,0:174:99:0,524,7266	0/0:179,0:179:99:0,539,7475	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	./.	1/1:0,85:85:99:3550,256,0
gi|293339394|gb|GU595196.1|	61305	.	G	T	1692.95	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.074;DP=2868;Dels=0.00;FS=67.890;HRun=0;HaplotypeScore=2.3330;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.596;QD=40.31;ReadPosRankSum=-3.231;SB=-208.82	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	0/0:104,0:104:99:0,313,4343	0/0:171,0:171:99:0,515,7141	./.	./.	0/0:197,0:197:99:0,593,8227	0/0:159,0:159:99:0,479,6640	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:145,0:145:99:0,436,6055	0/0:164,0:164:99:0,494,6849	0/0:200,0:200:99:0,602,8352	0/0:187,0:187:99:0,563,7809	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	./.	1/1:0,42:42:99:1754,126,0
gi|293339394|gb|GU595196.1|	61312	.	G	A	26517.83	.	AC=8;AF=0.222;AN=36;BaseQRankSum=0.956;DP=2824;Dels=0.00;FS=5.228;HRun=5;HaplotypeScore=1.2221;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.045;QD=41.76;ReadPosRankSum=0.437;SB=-12527.82	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	0/0:114,0:114:99:0,343,4761	0/0:159,0:159:99:0,479,6640	./.	./.	0/0:189,0:189:99:0,569,7893	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	1/1:0,161:161:99:6723,485,0	0/0:176,0:176:99:0,530,7350	1/1:0,166:166:99:6932,500,0	1/1:0,149:149:99:6222,448,0	1/1:0,159:159:99:6640,479,0	0/0:190,0:190:99:0,572,7934	0/0:196,0:196:99:0,590,8185	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	./.	0/0:22,0:22:66.22:0,66,919
gi|293339394|gb|GU595196.1|	61324	.	A	G	152.85	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.474;DP=2861;Dels=0.00;FS=6.669;HRun=5;HaplotypeScore=0.0000;InbreedingCoeff=0.9837;MQ=254.00;MQ0=0;MQRankSum=0.238;QD=30.57;ReadPosRankSum=-2.567;SB=-39.51	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:124,0:124:99:0,373,5178	0/0:167,0:167:99:0,503,6974	./.	./.	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:197,0:197:99:0,593,8227	0/0:173,0:173:99:0,521,7225	0/0:145,0:145:99:0,436,6055	0/0:174,0:174:99:0,524,7266	0/0:179,0:179:99:0,539,7475	0/0:191,0:191:99:0,575,7976	0/0:175,0:175:99:0,527,7308	0/0:152,0:152:99:0,458,6348	0/0:162,0:162:99:0,488,6765	./.	1/1:0,5:5:15.05:209,15,0
gi|293339394|gb|GU595196.1|	61363	.	T	A	45309.98	.	AC=18;AF=0.450;AN=40;BaseQRankSum=0.013;DP=2912;Dels=0.00;FS=8.061;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9458;MQ=254.00;MQ0=0;MQRankSum=-0.222;QD=41.76;ReadPosRankSum=-1.497;SB=-21673.63	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:156,0:156:99:0,470,6515	1/1:0,146:146:99:6097,439,0	1/1:0,167:167:99:6974,503,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:153,0:153:99:0,461,6389	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	1/1:0,167:167:99:6974,503,0	0/0:190,0:190:99:0,572,7934	1/1:0,176:176:99:7350,530,0	1/1:0,165:165:99:6890,497,0	1/1:0,182:182:99:7600,548,0	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	0/0:167,0:167:99:0,503,6974	0/0:150,0:150:99:0,452,6264	./.	1/1:0,79:79:99:3299,238,0
gi|293339394|gb|GU595196.1|	61390	.	C	T	3424.37	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.554;DP=2834;Dels=0.00;FS=10.321;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9656;MQ=254.00;MQ0=0;MQRankSum=0.071;QD=41.76;ReadPosRankSum=0.088;SB=-1378.11	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:123,0:123:99:0,370,5137	0/0:157,0:157:99:0,473,6556	0/0:4,0:4:12.04:0,12,167	0/0:10,0:10:30.10:0,30,418	0/0:170,0:170:99:0,512,7099	0/0:142,0:142:99:0,427,5930	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:174,0:174:99:0,524,7266	0/0:159,0:159:99:0,479,6640	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:151,0:151:99:0,455,6306	0/0:7,0:7:21.07:0,21,292	1/1:0,82:82:99:3424,247,0
gi|293339394|gb|GU595196.1|	61408	.	G	T	775.46	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.446;DP=2802;Dels=0.00;FS=60.175;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9867;MQ=254.00;MQ0=0;MQRankSum=-0.625;QD=36.93;ReadPosRankSum=-0.060;SB=-0.02	GT:AD:DP:GQ:PL	0/0:144,0:144:99:0,433,6013	0/0:163,0:163:99:0,491,6807	0/0:102,0:102:99:0,307,4260	0/0:157,0:157:99:0,473,6556	1/1:0,4:4:12.04:167,12,0	1/1:0,10:10:30.10:418,30,0	0/0:166,0:166:99:0,500,6932	0/0:137,0:137:99:0,412,5721	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:200,0:200:99:0,602,8352	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:152,0:152:99:0,458,6348	0/0:170,0:170:99:0,512,7099	0/0:147,0:147:99:0,442,6139	1/1:0,7:7:21.07:292,21,0	0/0:67,0:67:99:0,202,2798
gi|293339394|gb|GU595196.1|	61414	.	A	G	610.65	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.162;DP=2769;Dels=0.00;FS=47.912;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9749;MQ=254.00;MQ0=0;MQRankSum=-0.055;QD=35.92;ReadPosRankSum=-1.823;SB=-0.02	GT:AD:DP:GQ:PL	0/0:141,0:141:99:0,424,5888	0/0:171,0:171:99:0,515,7141	0/0:103,0:103:99:0,310,4301	0/0:151,0:151:99:0,455,6306	1/1:0,3:3:9.03:125,9,0	1/1:0,7:7:21.07:292,21,0	0/0:164,0:164:99:0,494,6849	0/0:143,0:143:99:0,430,5972	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	0/0:208,0:208:99:0,626,8686	0/0:166,0:166:99:0,500,6932	0/0:154,0:154:99:0,464,6431	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:153,0:153:99:0,461,6389	0/0:171,0:171:99:0,515,7141	0/0:141,0:141:99:0,424,5888	1/1:0,7:7:21.07:292,21,0	0/0:52,0:52:99:0,157,2172
gi|293339394|gb|GU595196.1|	61440	.	G	T	860.51	.	AC=5;AF=0.125;AN=40;BaseQRankSum=-0.343;DP=2792;Dels=0.00;FS=16.495;HRun=6;HaplotypeScore=0.4999;InbreedingCoeff=0.7153;MQ=254.00;MQ0=0;MQRankSum=-0.208;QD=28.68;ReadPosRankSum=-1.741;SB=-217.47	GT:AD:DP:GQ:PL	0/0:128,0:128:99:0,385,5345	0/0:180,0:180:99:0,542,7517	0/0:103,0:103:99:0,310,4301	0/0:154,0:154:99:0,464,6431	1/1:0,2:2:6.02:84,6,0	1/1:0,9:9:27.09:376,27,0	0/0:133,0:133:99:0,400,5554	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:239,0:239:99:0,719,9981	0/0:162,0:162:99:0,488,6765	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:151,0:151:99:0,455,6306	0/0:175,0:175:99:0,527,7308	0/0:141,0:141:99:0,424,5888	./.	0/1:6,13:19:99:486,0,193
gi|293339394|gb|GU595196.1|	61447	.	A	T	898.69	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.960;DP=2801;Dels=0.00;FS=10.357;HRun=6;HaplotypeScore=1.2998;InbreedingCoeff=0.9029;MQ=254.00;MQ0=0;MQRankSum=1.581;QD=39.07;ReadPosRankSum=-5.821;SB=-291.52	GT:AD:DP:GQ:PL	0/0:134,0:134:99:0,403,5596	0/0:171,0:171:99:0,515,7141	0/0:103,0:103:99:0,310,4301	0/0:151,0:151:99:0,455,6306	0/0:2,0:2:6.02:0,6,84	0/0:9,0:9:27.09:0,27,376	0/0:128,0:128:99:0,385,5345	0/0:167,0:167:99:0,503,6974	0/0:180,0:180:99:0,542,7517	0/0:176,0:176:99:0,530,7350	0/0:229,0:229:99:0,689,9563	0/0:157,0:157:99:0,473,6556	0/0:190,0:190:99:0,572,7934	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	0/0:155,0:155:99:0,467,6473	0/0:168,0:168:99:0,506,7016	0/0:152,0:152:99:0,458,6348	./.	1/1:0,23:23:69.23:960,69,0
gi|293339394|gb|GU595196.1|	61451	.	T	A	382.60	.	AC=4;AF=0.100;AN=40;BaseQRankSum=0.381;DP=2814;Dels=0.00;FS=33.919;HRun=1;HaplotypeScore=0.5499;InbreedingCoeff=0.9412;MQ=254.00;MQ0=0;MQRankSum=0.190;QD=34.78;ReadPosRankSum=2.076;SB=-0.01	GT:AD:DP:GQ:PL	0/0:137,0:137:99:0,412,5721	0/0:169,0:169:99:0,509,7057	0/0:106,0:106:99:0,319,4427	0/0:149,0:149:99:0,448,6222	1/1:0,2:2:6.02:84,6,0	1/1:0,9:9:27.09:376,27,0	0/0:127,0:127:99:0,382,5304	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/0:183,0:183:99:0,551,7642	0/0:216,0:216:99:0,650,9020	0/0:165,0:165:99:0,497,6890	0/0:191,0:191:99:0,575,7976	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:153,0:153:99:0,461,6389	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	./.	0/0:25,0:25:75.25:0,75,1044
gi|293339394|gb|GU595196.1|	61510	.	A	C	2945.52	.	AC=2;AF=0.053;AN=38;BaseQRankSum=2.145;DP=2794;Dels=0.00;FS=96.989;HRun=2;HaplotypeScore=0.0526;InbreedingCoeff=0.8478;MQ=254.00;MQ0=0;MQRankSum=0.033;QD=40.91;ReadPosRankSum=-1.269;SB=-417.62	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:151,0:151:99:0,455,6306	0/0:106,0:106:99:0,319,4427	0/0:168,0:168:99:0,506,7016	./.	0/0:1,0:1:3.01:0,3,42	0/0:155,0:155:99:0,467,6473	0/0:162,0:162:99:0,488,6765	0/0:157,0:157:99:0,473,6556	0/0:176,0:176:99:0,530,7350	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/0:152,0:152:99:0,458,6348	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	./.	1/1:0,72:72:99:3007,217,0
gi|293339394|gb|GU595196.1|	61521	.	A	T	3183.65	.	AC=4;AF=0.105;AN=38;BaseQRankSum=1.528;DP=2805;Dels=0.00;FS=117.053;HRun=1;HaplotypeScore=0.0526;InbreedingCoeff=0.8994;MQ=254.00;MQ0=0;MQRankSum=-0.665;QD=40.82;ReadPosRankSum=-0.238;SB=-375.86	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:155,0:155:99:0,467,6473	0/0:115,0:115:99:0,346,4802	0/0:162,0:162:99:0,488,6765	./.	1/1:0,1:1:3.01:42,3,0	0/0:159,0:159:99:0,479,6640	0/0:157,0:157:99:0,473,6556	0/0:156,0:156:99:0,470,6515	0/0:182,0:182:99:0,548,7600	0/0:180,0:180:99:0,542,7517	0/0:176,0:176:99:0,530,7350	0/0:147,0:147:99:0,442,6139	0/0:163,0:163:99:0,491,6807	0/0:155,0:155:99:0,467,6473	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:148,0:148:99:0,445,6181	0/0:166,0:166:99:0,500,6932	./.	1/1:0,77:77:99:3216,232,0
gi|293339394|gb|GU595196.1|	61551	.	C	T	650.88	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.026;DP=2860;Dels=0.00;FS=50.696;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9846;MQ=254.00;MQ0=0;MQRankSum=0.252;QD=36.16;ReadPosRankSum=0.015;SB=-0.02	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:110,0:110:99:0,331,4594	0/0:164,0:164:99:0,494,6849	1/1:0,4:4:12.04:167,12,0	1/1:0,8:8:24.08:334,24,0	0/0:140,0:140:99:0,421,5846	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	0/0:179,0:179:99:0,539,7475	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:157,0:157:99:0,473,6556	1/1:0,6:6:18.06:251,18,0	0/0:78,0:78:99:0,235,3257
gi|293339394|gb|GU595196.1|	61567	.	T	C	3925.49	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.108;DP=2904;Dels=0.00;FS=201.685;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9964;MQ=254.00;MQ0=0;MQRankSum=0.505;QD=41.76;ReadPosRankSum=0.706;SB=-208.82	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:156,0:156:99:0,470,6515	0/0:117,0:117:99:0,352,4886	0/0:168,0:168:99:0,506,7016	1/1:0,6:6:18.06:251,18,0	1/1:0,18:18:54.18:752,54,0	0/0:144,0:144:99:0,433,6013	0/0:158,0:158:99:0,476,6598	0/0:180,0:180:99:0,542,7517	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:179,0:179:99:0,539,7475	0/0:191,0:191:99:0,575,7976	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:155,0:155:99:0,467,6473	0/0:169,0:169:99:0,509,7057	0/0:152,0:152:99:0,458,6348	1/1:0,7:7:21.07:292,21,0	1/1:0,63:63:99:2631,190,0
gi|293339394|gb|GU595196.1|	61578	.	T	A	2318.01	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.609;DP=2877;Dels=0.00;FS=149.297;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9880;MQ=254.00;MQ0=0;MQRankSum=-0.406;QD=40.67;ReadPosRankSum=-1.400;SB=-41.78	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	0/0:119,0:119:99:0,358,4969	0/0:172,0:172:99:0,518,7183	0/0:6,0:6:18.06:0,18,251	0/0:16,0:16:48.16:0,48,668	0/0:152,0:152:99:0,458,6348	0/0:156,0:156:99:0,470,6515	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:179,0:179:99:0,539,7475	0/0:186,0:186:99:0,560,7767	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	0/0:7,0:7:21.07:0,21,292	1/1:0,57:57:99:2380,172,0
gi|293339394|gb|GU595196.1|	61609	.	G	A	100.19	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.661;DP=2852;Dels=0.00;FS=9.029;HRun=1;HaplotypeScore=0.2000;InbreedingCoeff=0.8628;MQ=254.00;MQ0=0;MQRankSum=-0.686;QD=25.05;ReadPosRankSum=-2.758;SB=-0.02	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:168,0:168:99:0,506,7016	0/0:149,0:149:99:0,448,6222	0/0:179,0:179:99:0,539,7475	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	0/0:188,0:188:99:0,566,7851	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:159,0:159:99:0,479,6640	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:149,0:149:99:0,448,6222	0/0:163,0:163:99:0,491,6807	0/0:145,0:145:99:0,436,6055	0/0:170,0:170:99:0,512,7099	./.	0/0:32,0:32:96.32:0,96,1336
gi|293339394|gb|GU595196.1|	61612	.	T	C	899.15	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-1.835;DP=2853;Dels=0.00;FS=66.410;HRun=1;HaplotypeScore=0.1052;InbreedingCoeff=0.9035;MQ=254.00;MQ0=0;MQRankSum=-1.118;QD=39.09;ReadPosRankSum=0.058;SB=-0.02	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:173,0:173:99:0,521,7225	0/0:147,0:147:99:0,442,6139	0/0:185,0:185:99:0,557,7726	./.	0/0:2,0:2:6.02:0,6,84	0/0:182,0:182:99:0,548,7600	0/0:159,0:159:99:0,479,6640	0/0:165,0:165:99:0,497,6890	0/0:158,0:158:99:0,476,6598	0/0:185,0:185:99:0,557,7726	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	0/0:166,0:166:99:0,500,6932	0/0:149,0:149:99:0,448,6222	0/0:174,0:174:99:0,524,7266	./.	1/1:0,23:23:69.23:960,69,0
gi|293339394|gb|GU595196.1|	61673	.	G	A	1108.81	.	AC=2;AF=0.059;AN=34;BaseQRankSum=-0.852;DP=2687;Dels=0.00;FS=0.707;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.277;QD=39.60;ReadPosRankSum=-7.184;SB=-542.89	GT:AD:DP:GQ:PL	0/0:139,0:139:99:0,418,5805	0/0:166,0:166:99:0,500,6932	0/0:119,0:119:99:0,358,4969	0/0:171,0:171:99:0,515,7141	./.	./.	1/1:0,28:28:84.28:1169,84,0	0/0:168,0:168:99:0,506,7016	0/0:191,0:191:99:0,575,7976	0/0:164,0:164:99:0,494,6849	0/0:179,0:179:99:0,539,7475	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:178,0:178:99:0,536,7433	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	./.	./.
gi|293339394|gb|GU595196.1|	61678	.	C	G	691.21	.	AC=2;AF=0.059;AN=34;BaseQRankSum=-0.634;DP=2697;Dels=0.00;FS=4.466;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.639;QD=38.40;ReadPosRankSum=-6.070;SB=-292.20	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:161,0:161:99:0,485,6723	0/0:120,0:120:99:0,361,5011	0/0:175,0:175:99:0,527,7308	./.	./.	1/1:0,18:18:54.18:752,54,0	0/0:172,0:172:99:0,518,7183	0/0:192,0:192:99:0,578,8018	0/0:165,0:165:99:0,497,6890	0/0:175,0:175:99:0,527,7308	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:186,0:186:99:0,560,7767	0/0:175,0:175:99:0,527,7308	0/0:158,0:158:99:0,476,6598	./.	./.
gi|293339394|gb|GU595196.1|	61679	.	C	T	607.69	.	AC=2;AF=0.059;AN=34;BaseQRankSum=-0.416;DP=2695;Dels=0.00;FS=0.952;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.603;QD=37.98;ReadPosRankSum=-5.097;SB=-291.82	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:163,0:163:99:0,491,6807	0/0:120,0:120:99:0,361,5011	0/0:174,0:174:99:0,524,7266	./.	./.	1/1:0,16:16:48.16:668,48,0	0/0:173,0:173:99:0,521,7225	0/0:193,0:193:99:0,581,8060	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:177,0:177:99:0,533,7392	0/0:161,0:161:99:0,485,6723	./.	./.
gi|293339394|gb|GU595196.1|	61721	.	C	T	774.22	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.390;DP=2854;Dels=0.00;FS=34.139;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.229;QD=38.71;ReadPosRankSum=-0.699;SB=-83.54	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:158,0:158:99:0,476,6598	0/0:118,0:118:99:0,355,4928	0/0:180,0:180:99:0,542,7517	./.	./.	0/0:165,0:165:99:0,497,6890	0/0:182,0:182:99:0,548,7600	0/0:186,0:186:99:0,560,7767	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:161,0:161:99:0,485,6723	0/0:155,0:155:99:0,467,6473	0/0:166,0:166:99:0,500,6932	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:186,0:186:99:0,560,7767	0/0:172,0:172:99:0,518,7183	./.	1/1:0,20:20:60.20:835,60,0
gi|293339394|gb|GU595196.1|	61730	.	G	A	648.94	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.405;DP=2824;Dels=0.00;FS=29.379;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.522;QD=38.17;ReadPosRankSum=-5.447;SB=-83.53	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	0/0:118,0:118:99:0,355,4928	0/0:172,0:172:99:0,518,7183	./.	./.	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:184,0:184:99:0,554,7684	0/0:173,0:173:99:0,521,7225	./.	1/1:0,17:17:51.17:710,51,0
gi|293339394|gb|GU595196.1|	61771	.	G	A	11818.19	.	AC=4;AF=0.118;AN=34;BaseQRankSum=2.259;DP=2904;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.449;QD=41.76;ReadPosRankSum=1.622;SB=-5762.94	GT:AD:DP:GQ:PL	0/0:202,0:202:99:0,608,8436	0/0:175,0:175:99:0,527,7308	1/1:0,132:132:99:5512,397,0	1/1:0,151:151:99:6306,455,0	./.	./.	0/0:187,0:187:99:0,563,7809	0/0:168,0:168:99:0,506,7016	0/0:184,0:184:99:0,554,7684	0/0:179,0:179:99:0,539,7475	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:184,0:184:99:0,554,7684	0/0:152,0:152:99:0,458,6348	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	0/0:184,0:184:99:0,554,7684	0/0:157,0:157:99:0,473,6556	./.	./.
gi|293339394|gb|GU595196.1|	61772	.	C	A	11985.23	.	AC=4;AF=0.118;AN=34;BaseQRankSum=1.208;DP=2914;Dels=0.00;FS=0.221;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.551;QD=41.76;ReadPosRankSum=1.259;SB=-5888.23	GT:AD:DP:GQ:PL	0/0:201,0:201:99:0,605,8394	0/0:177,0:177:99:0,533,7392	1/1:0,132:132:99:5512,397,0	1/1:0,155:155:99:6473,467,0	./.	./.	0/0:189,0:189:99:0,569,7893	0/0:171,0:171:99:0,515,7141	0/0:184,0:184:99:0,554,7684	0/0:179,0:179:99:0,539,7475	0/0:164,0:164:99:0,494,6849	0/0:177,0:177:99:0,533,7392	0/0:170,0:170:99:0,512,7099	0/0:184,0:184:99:0,554,7684	0/0:154,0:154:99:0,464,6431	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:182,0:182:99:0,548,7600	0/0:155,0:155:99:0,467,6473	./.	./.
gi|293339394|gb|GU595196.1|	61880	.	C	A	6055.27	.	AC=2;AF=0.059;AN=34;BaseQRankSum=-1.761;DP=2834;Dels=0.00;FS=12.147;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.013;QD=41.76;ReadPosRankSum=0.889;SB=-2463.88	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:126,0:126:99:0,379,5262	0/0:173,0:173:99:0,521,7225	./.	./.	1/1:0,145:145:99:6055,436,0	0/0:178,0:178:99:0,536,7433	0/0:184,0:184:99:0,554,7684	0/0:163,0:163:99:0,491,6807	0/0:184,0:184:99:0,554,7684	0/0:163,0:163:99:0,491,6807	0/0:151,0:151:99:0,455,6306	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:158,0:158:99:0,476,6598	0/0:180,0:180:99:0,542,7517	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	./.	./.
gi|293339394|gb|GU595196.1|	61976	.	T	C	565.43	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.870;DP=2850;Dels=0.00;FS=46.241;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.111;QD=37.70;ReadPosRankSum=-5.140;SB=-0.02	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:141,0:141:99:0,424,5888	0/0:133,0:133:99:0,400,5554	0/0:158,0:158:99:0,476,6598	./.	./.	0/0:185,0:185:99:0,557,7726	0/0:191,0:191:99:0,575,7976	0/0:183,0:183:99:0,551,7642	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	0/0:192,0:192:99:0,578,8018	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:141,0:141:99:0,424,5888	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	0/0:163,0:163:99:0,491,6807	./.	1/1:0,15:15:45.15:626,45,0
gi|293339394|gb|GU595196.1|	61984	.	A	C	1108.30	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.513;DP=2886;Dels=0.00;FS=55.505;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.346;QD=39.58;ReadPosRankSum=-3.779;SB=-83.54	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:143,0:143:99:0,430,5972	0/0:131,0:131:99:0,394,5471	0/0:164,0:164:99:0,494,6849	./.	./.	0/0:195,0:195:99:0,587,8143	0/0:196,0:196:99:0,590,8185	0/0:191,0:191:99:0,575,7976	0/0:155,0:155:99:0,467,6473	0/0:159,0:159:99:0,479,6640	0/0:192,0:192:99:0,578,8018	0/0:176,0:176:99:0,530,7350	0/0:160,0:160:99:0,482,6682	0/0:149,0:149:99:0,448,6222	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	0/0:158,0:158:99:0,476,6598	./.	1/1:0,28:28:84.28:1169,84,0
gi|293339394|gb|GU595196.1|	62030	.	C	G	3382.61	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.585;DP=2917;Dels=0.00;FS=225.942;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.262;QD=41.76;ReadPosRankSum=0.841;SB=-41.78	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:174,0:174:99:0,524,7266	0/0:117,0:117:99:0,352,4886	0/0:182,0:182:99:0,548,7600	./.	./.	0/0:189,0:189:99:0,569,7893	0/0:190,0:190:99:0,572,7934	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	0/0:153,0:153:99:0,461,6389	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:145,0:145:99:0,436,6055	0/0:167,0:167:99:0,503,6974	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	0/0:149,0:149:99:0,448,6222	./.	1/1:0,81:81:99:3383,244,0
gi|293339394|gb|GU595196.1|	62080	.	T	C	233.23	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.900;DP=2847;Dels=0.00;FS=22.249;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9959;MQ=254.00;MQ0=0;MQRankSum=-0.189;QD=33.32;ReadPosRankSum=-4.106;SB=-0.02	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:119,0:119:99:0,358,4969	0/0:168,0:168:99:0,506,7016	./.	./.	0/0:160,0:160:99:0,482,6682	0/0:188,0:188:99:0,566,7851	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:189,0:189:99:0,569,7893	0/0:190,0:190:99:0,572,7934	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	0/0:186,0:186:99:0,560,7767	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:141,0:141:99:0,424,5888	./.	1/1:0,7:7:21.07:292,21,0
gi|293339394|gb|GU595196.1|	62081	.	T	C	192.79	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.795;DP=2852;Dels=0.00;FS=19.130;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9918;MQ=254.00;MQ0=0;MQRankSum=0.481;QD=32.13;ReadPosRankSum=-4.190;SB=-0.02	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:122,0:122:99:0,367,5095	0/0:173,0:173:99:0,521,7225	./.	./.	0/0:163,0:163:99:0,491,6807	0/0:186,0:186:99:0,560,7767	0/0:169,0:169:99:0,509,7057	0/0:169,0:169:99:0,509,7057	0/0:189,0:189:99:0,569,7893	0/0:195,0:195:99:0,587,8143	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:188,0:188:99:0,566,7851	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:139,0:139:99:0,418,5805	./.	1/1:0,6:6:18.06:251,18,0
gi|293339394|gb|GU595196.1|	62101	.	C	T	1066.54	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.531;DP=2915;Dels=0.00;FS=69.211;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.275;QD=39.50;ReadPosRankSum=-1.017;SB=-41.78	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:182,0:182:99:0,548,7600	0/0:126,0:126:99:0,379,5262	0/0:166,0:166:99:0,500,6932	./.	./.	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:194,0:194:99:0,584,8102	0/0:187,0:187:99:0,563,7809	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	0/0:155,0:155:99:0,467,6473	0/0:178,0:178:99:0,536,7433	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	./.	1/1:0,27:27:81.27:1128,81,0
gi|293339394|gb|GU595196.1|	62201	.	C	T	4635.42	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.558;DP=2934;Dels=0.00;FS=10.874;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.244;QD=41.76;ReadPosRankSum=-0.059;SB=-1879.23	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	0/0:142,0:142:99:0,427,5930	0/0:181,0:181:99:0,545,7559	./.	./.	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	0/0:196,0:196:99:0,590,8185	0/0:163,0:163:99:0,491,6807	0/0:153,0:153:99:0,461,6389	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:133,0:133:99:0,400,5554	./.	1/1:0,111:111:99:4635,334,0
gi|293339394|gb|GU595196.1|	62350	.	G	T	7976.24	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.170;DP=3076;Dels=0.00;FS=3.858;HRun=0;HaplotypeScore=10.6097;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.493;QD=41.76;ReadPosRankSum=0.848;SB=-3758.45	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:117,0:117:99:0,352,4886	0/0:201,0:201:99:0,605,8394	./.	./.	1/1:0,191:191:99:7976,575,0	0/0:173,0:173:99:0,521,7225	0/0:186,0:186:99:0,560,7767	0/0:181,0:181:99:0,545,7559	0/0:190,0:190:99:0,572,7934	0/0:159,0:159:99:0,479,6640	0/0:182,0:182:99:0,548,7600	0/0:189,0:189:99:0,569,7893	0/0:151,0:151:99:0,455,6306	0/0:175,0:175:99:0,527,7308	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:157,0:157:99:0,473,6556	./.	0/0:172,0:172:99:0,518,7183
gi|293339394|gb|GU595196.1|	62357	.	G	T	29399.29	.	AC=8;AF=0.222;AN=36;BaseQRankSum=-0.370;DP=3017;Dels=0.00;FS=3.329;HRun=0;HaplotypeScore=8.6100;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.653;QD=41.76;ReadPosRankSum=-1.564;SB=-14240.29	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:166,0:166:99:0,500,6932	0/0:120,0:120:99:0,361,5011	0/0:202,0:202:99:0,608,8436	./.	./.	0/0:180,0:180:99:0,542,7517	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	1/1:0,174:174:99:7266,524,0	0/0:193,0:193:99:0,581,8060	1/1:0,158:158:99:6598,476,0	1/1:0,176:176:99:7350,530,0	1/1:0,196:196:99:8185,590,0	0/0:156,0:156:99:0,470,6515	0/0:167,0:167:99:0,503,6974	0/0:149,0:149:99:0,448,6222	0/0:164,0:164:99:0,494,6849	0/0:157,0:157:99:0,473,6556	./.	0/0:155,0:155:99:0,467,6473
gi|293339394|gb|GU595196.1|	62375	.	T	C	3841.97	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.510;DP=2957;Dels=0.00;FS=6.123;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.427;QD=41.76;ReadPosRankSum=-2.537;SB=-1670.43	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:185,0:185:99:0,557,7726	0/0:126,0:126:99:0,379,5262	0/0:180,0:180:99:0,542,7517	./.	./.	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:186,0:186:99:0,560,7767	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:189,0:189:99:0,569,7893	0/0:168,0:168:99:0,506,7016	0/0:154,0:154:99:0,464,6431	0/0:150,0:150:99:0,452,6264	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	./.	1/1:0,92:92:99:3842,277,0
gi|293339394|gb|GU595196.1|	62387	.	G	A	3466.13	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.638;DP=2926;Dels=0.00;FS=2.371;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.402;QD=41.76;ReadPosRankSum=-6.961;SB=-1628.67	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:191,0:191:99:0,575,7976	0/0:127,0:127:99:0,382,5304	0/0:165,0:165:99:0,497,6890	./.	./.	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:181,0:181:99:0,545,7559	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:194,0:194:99:0,584,8102	0/0:171,0:171:99:0,515,7141	0/0:146,0:146:99:0,439,6097	0/0:150,0:150:99:0,452,6264	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	./.	1/1:0,83:83:99:3466,250,0
gi|293339394|gb|GU595196.1|	62399	.	C	A	3716.69	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.086;DP=2926;Dels=0.00;FS=5.503;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.606;QD=41.76;ReadPosRankSum=0.341;SB=-1628.67	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:201,0:201:99:0,605,8394	0/0:134,0:134:99:0,403,5596	0/0:141,0:141:99:0,424,5888	./.	./.	0/0:174,0:174:99:0,524,7266	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	0/0:203,0:203:99:0,611,8477	0/0:165,0:165:99:0,497,6890	0/0:146,0:146:99:0,439,6097	0/0:138,0:138:99:0,415,5763	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	./.	1/1:0,89:89:99:3717,268,0
gi|293339394|gb|GU595196.1|	62435	.	G	T	7141.04	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.160;DP=3021;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.639;QD=41.76;ReadPosRankSum=1.078;SB=-3549.65	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:196,0:196:99:0,590,8185	0/0:127,0:127:99:0,382,5304	0/0:147,0:147:99:0,442,6139	./.	./.	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:156,0:156:99:0,470,6515	0/0:189,0:189:99:0,569,7893	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	0/0:157,0:157:99:0,473,6556	0/0:190,0:190:99:0,572,7934	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	./.	1/1:0,171:171:99:7141,515,0
gi|293339394|gb|GU595196.1|	62464	.	C	A	57671.04	.	AC=16;AF=0.444;AN=36;BaseQRankSum=0.026;DP=3030;Dels=0.00;FS=1.622;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.216;QD=41.76;ReadPosRankSum=-0.636;SB=-28230.00	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:157,0:157:99:0,473,6556	1/1:0,127:127:99:5304,382,0	1/1:0,173:173:99:7225,521,0	./.	./.	1/1:0,180:180:99:7517,542,0	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	1/1:0,182:182:99:7600,548,0	0/0:163,0:163:99:0,491,6807	1/1:0,145:145:99:6055,436,0	1/1:0,193:193:99:8060,581,0	1/1:0,188:188:99:7851,566,0	0/0:141,0:141:99:0,424,5888	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	./.	1/1:0,193:193:99:8060,581,0
gi|293339394|gb|GU595196.1|	62552	.	T	C	55833.58	.	AC=16;AF=0.444;AN=36;BaseQRankSum=0.102;DP=2996;Dels=0.00;FS=4.457;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.699;QD=41.76;ReadPosRankSum=1.280;SB=-27520.08	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:187,0:187:99:0,563,7809	1/1:0,120:120:99:5011,361,0	1/1:0,188:188:99:7851,566,0	./.	./.	1/1:0,177:177:99:7392,533,0	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	1/1:0,154:154:99:6431,464,0	0/0:160,0:160:99:0,482,6682	1/1:0,163:163:99:6807,491,0	1/1:0,186:186:99:7767,560,0	1/1:0,189:189:99:7893,569,0	0/0:162,0:162:99:0,488,6765	0/0:173,0:173:99:0,521,7225	0/0:160,0:160:99:0,482,6682	0/0:160,0:160:99:0,482,6682	0/0:151,0:151:99:0,455,6306	./.	1/1:0,160:160:99:6682,482,0
gi|293339394|gb|GU595196.1|	62575	.	G	T	29858.66	.	AC=8;AF=0.222;AN=36;BaseQRankSum=1.497;DP=3013;Dels=0.00;FS=11.014;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.677;QD=41.76;ReadPosRankSum=-1.217;SB=-14198.53	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:116,0:116:99:0,349,4844	0/0:187,0:187:99:0,563,7809	./.	./.	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	0/0:180,0:180:99:0,542,7517	1/1:0,175:175:99:7308,527,0	0/0:154,0:154:99:0,464,6431	1/1:0,177:177:99:7392,533,0	1/1:0,169:169:99:7057,509,0	1/1:0,194:194:99:8102,584,0	0/0:163,0:163:99:0,491,6807	0/0:186,0:186:99:0,560,7767	0/0:164,0:164:99:0,494,6849	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	./.	0/0:136,0:136:99:0,409,5679
gi|293339394|gb|GU595196.1|	62614	.	T	G	12903.96	.	AC=4;AF=0.111;AN=36;BaseQRankSum=1.914;DP=3062;Dels=0.00;FS=2.931;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.033;QD=41.76;ReadPosRankSum=-0.440;SB=-6389.35	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:203,0:203:99:0,611,8477	1/1:0,125:125:99:5220,376,0	1/1:0,184:184:99:7684,554,0	./.	./.	0/0:183,0:183:99:0,551,7642	0/0:151,0:151:99:0,455,6306	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	0/0:178,0:178:99:0,536,7433	0/0:191,0:191:99:0,575,7976	0/0:159,0:159:99:0,479,6640	0/0:188,0:188:99:0,566,7851	0/0:184,0:184:99:0,554,7684	0/0:177,0:177:99:0,533,7392	0/0:185,0:185:99:0,557,7726	0/0:177,0:177:99:0,533,7392	0/0:177,0:177:99:0,533,7392	./.	0/0:102,0:102:99:0,307,4260
gi|293339394|gb|GU595196.1|	62650	.	C	A	45518.78	.	AC=14;AF=0.389;AN=36;BaseQRankSum=-1.183;DP=2980;Dels=0.00;FS=7.084;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.263;QD=41.76;ReadPosRankSum=-0.569;SB=-21256.03	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:195,0:195:99:0,587,8143	1/1:0,132:132:99:5512,397,0	1/1:0,185:185:99:7726,557,0	./.	./.	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	1/1:0,163:163:99:6807,491,0	0/0:170,0:170:99:0,512,7099	1/1:0,189:189:99:7893,569,0	1/1:0,155:155:99:6473,467,0	1/1:0,162:162:99:6765,488,0	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	0/0:154,0:154:99:0,464,6431	./.	1/1:0,104:104:99:4343,313,0
gi|293339394|gb|GU595196.1|	62701	.	C	G	4176.05	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.428;DP=2928;Dels=0.00;FS=134.785;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.424;QD=41.76;ReadPosRankSum=1.682;SB=-542.90	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:173,0:173:99:0,521,7225	0/0:106,0:106:99:0,319,4427	0/0:156,0:156:99:0,470,6515	./.	./.	0/0:180,0:180:99:0,542,7517	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:146,0:146:99:0,439,6097	0/0:184,0:184:99:0,554,7684	0/0:175,0:175:99:0,527,7308	0/0:133,0:133:99:0,400,5554	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:203,0:203:99:0,611,8477	./.	1/1:0,100:100:99:4176,301,0
gi|293339394|gb|GU595196.1|	62746	.	C	A	3029.28	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.009;DP=2952;Dels=0.00;FS=55.256;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.281;QD=40.94;ReadPosRankSum=2.303;SB=-709.94	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:172,0:172:99:0,518,7183	0/0:116,0:116:99:0,349,4844	0/0:153,0:153:99:0,461,6389	./.	./.	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	0/0:188,0:188:99:0,566,7851	0/0:190,0:190:99:0,572,7934	0/0:164,0:164:99:0,494,6849	0/0:177,0:177:99:0,533,7392	0/0:185,0:185:99:0,557,7726	0/0:178,0:178:99:0,536,7433	0/0:159,0:159:99:0,479,6640	0/0:196,0:196:99:0,590,8185	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	./.	1/1:0,74:74:99:3090,223,0
gi|293339394|gb|GU595196.1|	62750	.	T	C	2945.76	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.430;DP=2955;Dels=0.00;FS=62.300;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.248;QD=40.91;ReadPosRankSum=-0.906;SB=-626.42	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:114,0:114:99:0,343,4761	0/0:154,0:154:99:0,464,6431	./.	./.	0/0:180,0:180:99:0,542,7517	0/0:178,0:178:99:0,536,7433	0/0:184,0:184:99:0,554,7684	0/0:187,0:187:99:0,563,7809	0/0:161,0:161:99:0,485,6723	0/0:179,0:179:99:0,539,7475	0/0:187,0:187:99:0,563,7809	0/0:174,0:174:99:0,524,7266	0/0:159,0:159:99:0,479,6640	0/0:192,0:192:99:0,578,8018	0/0:173,0:173:99:0,521,7225	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	./.	1/1:0,72:72:99:3007,217,0
gi|293339394|gb|GU595196.1|	62774	.	T	C	42887.88	.	AC=14;AF=0.389;AN=36;BaseQRankSum=-1.031;DP=2914;Dels=0.00;FS=11.653;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.390;QD=41.76;ReadPosRankSum=0.120;SB=-20713.14	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	1/1:0,121:121:99:5053,364,0	1/1:0,163:163:99:6807,491,0	./.	./.	0/0:183,0:183:99:0,551,7642	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	1/1:0,176:176:99:7350,530,0	0/0:157,0:157:99:0,473,6556	1/1:0,183:183:99:7642,551,0	1/1:0,162:162:99:6765,488,0	1/1:0,183:183:99:7642,551,0	0/0:179,0:179:99:0,539,7475	0/0:188,0:188:99:0,566,7851	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	0/0:161,0:161:99:0,485,6723	./.	1/1:0,39:39:99:1629,117,0
gi|293339394|gb|GU595196.1|	62795	.	T	C	40716.34	.	AC=12;AF=0.333;AN=36;BaseQRankSum=1.622;DP=2917;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=1.1110;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.650;QD=41.76;ReadPosRankSum=0.016;SB=-20211.95	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:171,0:171:99:0,515,7141	1/1:0,134:134:99:5596,403,0	1/1:0,181:181:99:7559,545,0	./.	./.	0/0:180,0:180:99:0,542,7517	0/0:162,0:162:99:0,488,6765	0/0:184,0:184:99:0,554,7684	1/1:0,151:151:99:6306,455,0	0/0:171,0:171:99:0,515,7141	1/1:0,175:175:99:7308,527,0	1/1:0,145:145:99:6055,436,0	1/1:0,189:189:99:7893,569,0	0/0:189,0:189:99:0,569,7893	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:158,0:158:99:0,476,6598	0/0:151,0:151:99:0,455,6306	./.	0/0:39,0:39:99:0,117,1629
gi|293339394|gb|GU595196.1|	62804	.	T	C	774.22	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.517;DP=2903;Dels=0.00;FS=37.219;HRun=0;HaplotypeScore=1.1110;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.798;QD=38.71;ReadPosRankSum=-5.110;SB=-83.54	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:171,0:171:99:0,515,7141	0/0:139,0:139:99:0,418,5805	0/0:173,0:173:99:0,521,7225	./.	./.	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:186,0:186:99:0,560,7767	0/0:154,0:154:99:0,464,6431	0/0:173,0:173:99:0,521,7225	0/0:182,0:182:99:0,548,7600	0/0:137,0:137:99:0,412,5721	0/0:179,0:179:99:0,539,7475	0/0:194,0:194:99:0,584,8102	0/0:186,0:186:99:0,560,7767	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	0/0:152,0:152:99:0,458,6348	./.	1/1:0,20:20:60.20:835,60,0
gi|293339394|gb|GU595196.1|	62919	.	G	T	983.02	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.444;DP=2919;Dels=0.00;FS=72.616;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.173;QD=39.32;ReadPosRankSum=3.327;SB=-0.02	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:130,0:130:99:0,391,5429	0/0:174,0:174:99:0,524,7266	./.	./.	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:190,0:190:99:0,572,7934	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:165,0:165:99:0,497,6890	0/0:157,0:157:99:0,473,6556	0/0:183,0:183:99:0,551,7642	./.	1/1:0,25:25:75.25:1044,75,0
gi|293339394|gb|GU595196.1|	62921	.	G	T	1108.30	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.228;DP=2912;Dels=0.00;FS=81.715;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.983;QD=39.58;ReadPosRankSum=3.377;SB=-0.02	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:128,0:128:99:0,385,5345	0/0:170,0:170:99:0,512,7099	./.	./.	0/0:184,0:184:99:0,554,7684	0/0:175,0:175:99:0,527,7308	0/0:176,0:176:99:0,530,7350	0/0:172,0:172:99:0,518,7183	0/0:191,0:191:99:0,575,7976	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:190,0:190:99:0,572,7934	0/0:165,0:165:99:0,497,6890	0/0:152,0:152:99:0,458,6348	0/0:176,0:176:99:0,530,7350	./.	1/1:0,28:28:84.28:1169,84,0
gi|293339394|gb|GU595196.1|	62958	.	C	T	565.43	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.069;DP=2822;Dels=0.00;FS=41.428;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.588;QD=37.70;ReadPosRankSum=2.382;SB=-0.02	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:154,0:154:99:0,464,6431	0/0:98,0:98:99:0,295,4093	0/0:156,0:156:99:0,470,6515	./.	./.	0/0:184,0:184:99:0,554,7684	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	0/0:186,0:186:99:0,560,7767	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:149,0:149:99:0,448,6222	0/0:163,0:163:99:0,491,6807	./.	1/1:0,15:15:45.15:626,45,0
gi|293339394|gb|GU595196.1|	62972	.	T	G	356.91	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.727;DP=2826;Dels=0.00;FS=26.902;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-0.717;QD=35.69;ReadPosRankSum=-3.416;SB=-0.02	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:107,0:107:99:0,322,4468	0/0:158,0:158:99:0,476,6598	./.	./.	0/0:181,0:181:99:0,545,7559	0/0:169,0:169:99:0,509,7057	0/0:189,0:189:99:0,569,7893	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:192,0:192:99:0,578,8018	0/0:195,0:195:99:0,587,8143	0/0:177,0:177:99:0,533,7392	0/0:157,0:157:99:0,473,6556	0/0:150,0:150:99:0,452,6264	0/0:164,0:164:99:0,494,6849	0/0:146,0:146:99:0,439,6097	0/0:153,0:153:99:0,461,6389	./.	1/1:0,10:10:30.10:418,30,0
gi|293339394|gb|GU595196.1|	62980	.	C	G	152.85	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.107;DP=2820;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9837;MQ=254.00;MQ0=0;MQRankSum=-0.445;QD=30.57;ReadPosRankSum=-2.400;SB=-78.68	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	0/0:107,0:107:99:0,322,4468	0/0:158,0:158:99:0,476,6598	./.	./.	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	0/0:185,0:185:99:0,557,7726	0/0:187,0:187:99:0,563,7809	0/0:168,0:168:99:0,506,7016	0/0:201,0:201:99:0,605,8394	0/0:205,0:205:99:0,617,8561	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:145,0:145:99:0,436,6055	0/0:168,0:168:99:0,506,7016	0/0:142,0:142:99:0,427,5930	0/0:149,0:149:99:0,448,6222	./.	1/1:0,5:5:15.05:209,15,0
gi|293339394|gb|GU595196.1|	62986	.	T	A	152.85	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.445;DP=2805;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9837;MQ=254.00;MQ0=0;MQRankSum=-0.925;QD=30.57;ReadPosRankSum=-0.693;SB=-78.68	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:115,0:115:99:0,346,4802	0/0:154,0:154:99:0,464,6431	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:186,0:186:99:0,560,7767	0/0:189,0:189:99:0,569,7893	0/0:163,0:163:99:0,491,6807	0/0:190,0:190:99:0,572,7934	0/0:203,0:203:99:0,611,8477	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:147,0:147:99:0,442,6139	0/0:165,0:165:99:0,497,6890	0/0:142,0:142:99:0,427,5930	0/0:145,0:145:99:0,436,6055	./.	1/1:0,5:5:15.05:209,15,0
gi|293339394|gb|GU595196.1|	63027	.	A	G	25014.46	.	AC=8;AF=0.235;AN=34;BaseQRankSum=0.824;DP=2745;Dels=0.00;FS=8.191;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.569;QD=41.76;ReadPosRankSum=1.747;SB=-12319.32	GT:AD:DP:GQ:PL	0/0:198,0:198:99:0,596,8269	0/0:169,0:169:99:0,509,7057	0/0:113,0:113:99:0,340,4719	0/0:158,0:158:99:0,476,6598	./.	./.	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	1/1:0,157:157:99:6556,473,0	0/0:159,0:159:99:0,479,6640	1/1:0,146:146:99:6097,439,0	1/1:0,149:149:99:6222,448,0	1/1:0,147:147:99:6139,442,0	0/0:192,0:192:99:0,578,8018	0/0:163,0:163:99:0,491,6807	0/0:161,0:161:99:0,485,6723	0/0:151,0:151:99:0,455,6306	0/0:154,0:154:99:0,464,6431	./.	./.
gi|293339394|gb|GU595196.1|	63029	.	A	T	24805.66	.	AC=8;AF=0.235;AN=34;BaseQRankSum=-0.272;DP=2747;Dels=0.00;FS=7.122;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.619;QD=41.76;ReadPosRankSum=1.351;SB=-12319.32	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:167,0:167:99:0,503,6974	0/0:113,0:113:99:0,340,4719	0/0:154,0:154:99:0,464,6431	./.	./.	0/0:172,0:172:99:0,518,7183	0/0:177,0:177:99:0,533,7392	0/0:183,0:183:99:0,551,7642	1/1:0,147:147:99:6139,442,0	0/0:166,0:166:99:0,500,6932	1/1:0,139:139:99:5805,418,0	1/1:0,152:152:99:6348,458,0	1/1:0,156:156:99:6515,470,0	0/0:191,0:191:99:0,575,7976	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:154,0:154:99:0,464,6431	0/0:159,0:159:99:0,479,6640	./.	./.
gi|293339394|gb|GU595196.1|	63051	.	C	T	1399.89	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.017;DP=2655;Dels=0.00;FS=110.073;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9996;MQ=254.00;MQ0=0;MQRankSum=0.243;QD=38.89;ReadPosRankSum=-5.826;SB=-0.02	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:186,0:186:99:0,560,7767	0/0:92,0:92:99:0,277,3842	0/0:128,0:128:99:0,385,5345	1/1:0,10:10:30.10:418,30,0	1/1:0,10:10:30.10:418,30,0	0/0:149,0:149:99:0,448,6222	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:154,0:154:99:0,464,6431	0/0:141,0:141:99:0,424,5888	0/0:146,0:146:99:0,439,6097	0/0:146,0:146:99:0,439,6097	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:155,0:155:99:0,467,6473	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	1/1:0,16:16:48.16:668,48,0	./.
gi|293339394|gb|GU595196.1|	63071	.	A	T	25056.22	.	AC=8;AF=0.200;AN=40;BaseQRankSum=1.566;DP=2694;Dels=0.00;FS=10.200;HRun=0;HaplotypeScore=5.0993;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.964;QD=41.76;ReadPosRankSum=3.411;SB=-11734.67	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:196,0:196:99:0,590,8185	0/0:87,0:87:99:0,262,3633	0/0:114,0:114:99:0,343,4761	0/0:29,0:29:87.29:0,87,1211	0/0:31,0:31:93.31:0,93,1295	0/0:133,0:133:99:0,400,5554	0/0:159,0:159:99:0,479,6640	0/0:156,0:156:99:0,470,6515	1/1:0,162:162:99:6765,488,0	0/0:160,0:160:99:0,482,6682	1/1:0,141:141:99:5888,424,0	1/1:0,150:150:99:6264,452,0	1/1:0,147:147:99:6139,442,0	0/0:162,0:162:99:0,488,6765	0/0:178,0:178:99:0,536,7433	0/0:151,0:151:99:0,455,6306	0/0:170,0:170:99:0,512,7099	0/0:183,0:183:99:0,551,7642	0/0:42,0:42:99:0,126,1754	./.
gi|293339394|gb|GU595196.1|	63078	.	T	C	5094.78	.	AC=6;AF=0.150;AN=40;BaseQRankSum=1.206;DP=2779;Dels=0.00;FS=365.581;HRun=0;HaplotypeScore=6.0992;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.757;QD=41.76;ReadPosRankSum=3.427;SB=-0.02	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:186,0:186:99:0,560,7767	0/0:84,0:84:99:0,253,3508	0/0:107,0:107:99:0,322,4468	1/1:0,35:35:99:1462,105,0	1/1:0,38:38:99:1587,114,0	0/0:123,0:123:99:0,370,5137	0/0:166,0:166:99:0,500,6932	0/0:151,0:151:99:0,455,6306	0/0:184,0:184:99:0,554,7684	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:188,0:188:99:0,566,7851	0/0:155,0:155:99:0,467,6473	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	1/1:0,49:49:99:2046,147,0	./.
gi|293339394|gb|GU595196.1|	63107	.	C	A	6013.51	.	AC=6;AF=0.150;AN=40;BaseQRankSum=0.335;DP=2809;Dels=0.00;FS=462.358;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.928;QD=41.76;ReadPosRankSum=0.622;SB=-0.02	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:148,0:148:99:0,445,6181	0/0:84,0:84:99:0,253,3508	0/0:111,0:111:99:0,334,4635	1/1:0,41:41:99:1712,123,0	1/1:0,46:46:99:1921,138,0	0/0:123,0:123:99:0,370,5137	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:183,0:183:99:0,551,7642	0/0:172,0:172:99:0,518,7183	0/0:172,0:172:99:0,518,7183	0/0:183,0:183:99:0,551,7642	0/0:163,0:163:99:0,491,6807	0/0:183,0:183:99:0,551,7642	0/0:181,0:181:99:0,545,7559	0/0:149,0:149:99:0,448,6222	0/0:157,0:157:99:0,473,6556	0/0:157,0:157:99:0,473,6556	1/1:0,57:57:99:2380,172,0	./.
gi|293339394|gb|GU595196.1|	63142	.	G	A	5595.90	.	AC=6;AF=0.150;AN=40;BaseQRankSum=0.562;DP=2825;Dels=0.00;FS=423.199;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.208;QD=41.76;ReadPosRankSum=0.288;SB=-0.02	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:144,0:144:99:0,433,6013	0/0:104,0:104:99:0,313,4343	0/0:143,0:143:99:0,430,5972	1/1:0,44:44:99:1837,132,0	1/1:0,44:44:99:1837,132,0	0/0:119,0:119:99:0,358,4969	0/0:185,0:185:99:0,557,7726	0/0:149,0:149:99:0,448,6222	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:189,0:189:99:0,569,7893	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:153,0:153:99:0,461,6389	0/0:155,0:155:99:0,467,6473	0/0:157,0:157:99:0,473,6556	0/0:164,0:164:99:0,494,6849	1/1:0,46:46:99:1921,138,0	./.
gi|293339394|gb|GU595196.1|	63202	.	C	T	6055.27	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.218;DP=2950;Dels=0.00;FS=247.588;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.377;QD=41.76;ReadPosRankSum=0.838;SB=-542.90	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:176,0:176:99:0,530,7350	0/0:107,0:107:99:0,322,4468	0/0:177,0:177:99:0,533,7392	1/1:0,39:39:99:1629,117,0	1/1:0,61:61:99:2547,184,0	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:187,0:187:99:0,563,7809	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:190,0:190:99:0,572,7934	0/0:145,0:145:99:0,436,6055	0/0:176,0:176:99:0,530,7350	0/0:159,0:159:99:0,479,6640	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:140,0:140:99:0,421,5846	0/0:162,0:162:99:0,488,6765	1/1:0,45:45:99:1879,135,0	0/0:12,0:12:36.12:0,36,501
gi|293339394|gb|GU595196.1|	63216	.	A	G	1441.03	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.461;DP=3073;Dels=0.00;FS=81.903;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.239;QD=40.03;ReadPosRankSum=-1.653;SB=-41.78	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:187,0:187:99:0,563,7809	0/0:118,0:118:99:0,355,4928	0/0:181,0:181:99:0,545,7559	0/0:53,0:53:99:0,160,2213	0/0:66,0:66:99:0,199,2756	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/0:190,0:190:99:0,572,7934	0/0:157,0:157:99:0,473,6556	0/0:179,0:179:99:0,539,7475	0/0:192,0:192:99:0,578,8018	0/0:160,0:160:99:0,482,6682	0/0:183,0:183:99:0,551,7642	0/0:161,0:161:99:0,485,6723	0/0:185,0:185:99:0,557,7726	0/0:171,0:171:99:0,515,7141	0/0:143,0:143:99:0,430,5972	0/0:159,0:159:99:0,479,6640	0/0:54,0:54:99:0,163,2255	1/1:0,36:36:99:1503,108,0
gi|293339394|gb|GU595196.1|	63227	.	A	T	2109.20	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.173;DP=3134;Dels=0.00;FS=123.820;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.511;QD=40.56;ReadPosRankSum=2.359;SB=-41.78	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:182,0:182:99:0,548,7600	0/0:116,0:116:99:0,349,4844	0/0:187,0:187:99:0,563,7809	0/0:60,0:60:99:0,181,2506	0/0:75,0:75:99:0,226,3132	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:198,0:198:99:0,596,8269	0/0:156,0:156:99:0,470,6515	0/0:190,0:190:99:0,572,7934	0/0:189,0:189:99:0,569,7893	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	0/0:190,0:190:99:0,572,7934	0/0:170,0:170:99:0,512,7099	0/0:152,0:152:99:0,458,6348	0/0:168,0:168:99:0,506,7016	0/0:56,0:56:99:0,169,2339	1/1:0,52:52:99:2172,157,0
gi|293339394|gb|GU595196.1|	63249	.	G	A	9312.57	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.558;DP=2993;Dels=0.00;FS=77.727;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.419;QD=41.76;ReadPosRankSum=-0.744;SB=-2630.92	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	0/0:72,0:72:99:0,217,3007	0/0:95,0:95:99:0,286,3967	1/1:0,73:73:99:3049,220,0	1/1:0,82:82:99:3424,247,0	0/0:101,0:101:99:0,304,4218	0/0:191,0:191:99:0,575,7976	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:187,0:187:99:0,563,7809	0/0:183,0:183:99:0,551,7642	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:189,0:189:99:0,569,7893	0/0:170,0:170:99:0,512,7099	0/0:154,0:154:99:0,464,6431	0/0:181,0:181:99:0,545,7559	1/1:0,68:68:99:2840,205,0	0/0:68,0:68:99:0,205,2840
gi|293339394|gb|GU595196.1|	63267	.	G	C	3758.45	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.554;DP=2765;Dels=0.00;FS=11.658;HRun=2;HaplotypeScore=1.4284;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.641;QD=41.76;ReadPosRankSum=-10.723;SB=-1586.24	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	1/1:0,25:25:75.25:1044,75,0	1/1:0,33:33:99:1378,99,0	0/0:69,0:69:99:0,208,2881	0/0:89,0:89:99:0,268,3717	1/1:0,32:32:96.32:1336,96,0	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:191,0:191:99:0,575,7976	0/0:179,0:179:99:0,539,7475	0/0:187,0:187:99:0,563,7809	0/0:159,0:159:99:0,479,6640	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:77,0:77:99:0,232,3216	0/0:39,0:39:99:0,117,1629
gi|293339394|gb|GU595196.1|	63270	.	C	A	2191.87	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-2.197;DP=2711;Dels=0.00;FS=7.634;HRun=0;HaplotypeScore=1.4284;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.331;QD=39.85;ReadPosRankSum=-9.365;SB=-958.95	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:164,0:164:99:0,494,6849	1/1:0,12:12:36.12:501,36,0	1/1:0,24:24:72.24:1002,72,0	0/0:73,0:73:99:0,220,3049	0/0:93,0:93:99:0,280,3884	1/1:0,19:19:57.19:793,57,0	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:192,0:192:99:0,578,8018	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:150,0:150:99:0,452,6264	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	0/0:75,0:75:99:0,226,3132	0/0:32,0:32:96.32:0,96,1336
gi|293339394|gb|GU595196.1|	63273	.	T	G	1190.47	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.121;DP=2678;Dels=0.00;FS=71.722;HRun=1;HaplotypeScore=3.0472;InbreedingCoeff=0.9986;MQ=254.00;MQ0=0;MQRankSum=-1.897;QD=39.68;ReadPosRankSum=-2.769;SB=-41.71	GT:AD:DP:GQ:PL	0/0:144,0:144:99:0,433,6013	0/0:169,0:169:99:0,509,7057	0/0:9,0:9:27.09:0,27,376	0/0:11,0:11:33.11:0,33,459	0/0:72,0:72:99:0,217,3007	0/0:85,0:85:99:0,256,3550	0/0:12,0:12:36.12:0,36,501	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:179,0:179:99:0,539,7475	0/0:190,0:190:99:0,572,7934	0/0:177,0:177:99:0,533,7392	0/0:185,0:185:99:0,557,7726	0/0:153,0:153:99:0,461,6389	0/0:163,0:163:99:0,491,6807	0/0:175,0:175:99:0,527,7308	0/0:77,0:77:99:0,232,3216	1/1:0,30:30:90.30:1253,90,0
gi|293339394|gb|GU595196.1|	63285	.	T	G	315.41	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.390;DP=2654;Dels=0.00;FS=24.139;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9990;MQ=254.00;MQ0=0;MQRankSum=0.862;QD=35.05;ReadPosRankSum=-3.956;SB=-0.02	GT:AD:DP:GQ:PL	0/0:141,0:141:99:0,424,5888	0/0:178,0:178:99:0,536,7433	./.	./.	0/0:72,0:72:99:0,217,3007	0/0:90,0:90:99:0,271,3758	./.	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:165,0:165:99:0,497,6890	0/0:152,0:152:99:0,458,6348	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:181,0:181:99:0,545,7559	0/0:192,0:192:99:0,578,8018	0/0:191,0:191:99:0,575,7976	0/0:156,0:156:99:0,470,6515	0/0:182,0:182:99:0,548,7600	0/0:176,0:176:99:0,530,7350	0/0:79,0:79:99:0,238,3299	1/1:0,9:9:27.09:376,27,0
gi|293339394|gb|GU595196.1|	63294	.	T	A	35.21	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.629;DP=2671;Dels=0.00;FS=3.011;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8830;MQ=254.00;MQ0=0;MQRankSum=-0.740;QD=17.60;ReadPosRankSum=-2.414;SB=-0.02	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:175,0:175:99:0,527,7308	./.	./.	0/0:60,0:60:99:0,181,2506	0/0:91,0:91:99:0,274,3800	./.	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:155,0:155:99:0,467,6473	0/0:177,0:177:99:0,533,7392	0/0:185,0:185:99:0,557,7726	0/0:187,0:187:99:0,563,7809	0/0:200,0:200:99:0,602,8352	0/0:197,0:197:99:0,593,8227	0/0:143,0:143:99:0,430,5972	0/0:189,0:189:99:0,569,7893	0/0:164,0:164:99:0,494,6849	0/0:85,0:85:99:0,256,3550	1/1:0,2:2:6.02:84,6,0
gi|293339394|gb|GU595196.1|	63297	.	C	G	233.23	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.566;DP=2669;Dels=0.00;FS=18.063;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9959;MQ=254.00;MQ0=0;MQRankSum=0.476;QD=33.32;ReadPosRankSum=-3.764;SB=-0.02	GT:AD:DP:GQ:PL	0/0:144,0:144:99:0,433,6013	0/0:166,0:166:99:0,500,6932	./.	./.	0/0:56,0:56:99:0,169,2339	0/0:86,0:86:99:0,259,3591	./.	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:187,0:187:99:0,563,7809	0/0:195,0:195:99:0,587,8143	0/0:200,0:200:99:0,602,8352	0/0:197,0:197:99:0,593,8227	0/0:146,0:146:99:0,439,6097	0/0:193,0:193:99:0,581,8060	0/0:157,0:157:99:0,473,6556	0/0:82,0:82:99:0,247,3424	1/1:0,7:7:21.07:292,21,0
gi|293339394|gb|GU595196.1|	63346	.	T	A	7182.80	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.285;DP=2912;Dels=0.00;FS=36.738;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.002;QD=41.76;ReadPosRankSum=-1.119;SB=-2672.50	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:182,0:182:99:0,548,7600	1/1:0,52:52:99:2172,157,0	1/1:0,45:45:99:1879,135,0	0/0:99,0:99:99:0,298,4134	0/0:85,0:85:99:0,256,3550	1/1:0,75:75:99:3132,226,0	0/0:160,0:160:99:0,482,6682	0/0:149,0:149:99:0,448,6222	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	0/0:198,0:198:99:0,596,8269	0/0:185,0:185:99:0,557,7726	0/0:198,0:198:99:0,596,8269	0/0:157,0:157:99:0,473,6556	0/0:173,0:173:99:0,521,7225	0/0:151,0:151:99:0,455,6306	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:80,0:80:99:0,241,3341	0/0:104,0:104:99:0,313,4343
gi|293339394|gb|GU595196.1|	63364	.	A	C	16328.31	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.992;DP=3080;Dels=0.00;FS=1.769;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.064;QD=41.76;ReadPosRankSum=3.141;SB=-8059.76	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:178,0:178:99:0,536,7433	1/1:0,72:72:99:3007,217,0	1/1:0,86:86:99:3591,259,0	0/0:98,0:98:99:0,295,4093	0/0:100,0:100:99:0,301,4176	1/1:0,130:130:99:5429,391,0	0/0:177,0:177:99:0,533,7392	0/0:143,0:143:99:0,430,5972	0/0:159,0:159:99:0,479,6640	0/0:180,0:180:99:0,542,7517	0/0:209,0:209:99:0,629,8728	0/0:168,0:168:99:0,506,7016	0/0:189,0:189:99:0,569,7893	0/0:174,0:174:99:0,524,7266	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:91,0:91:99:0,274,3800	1/1:0,103:103:99:4301,310,0
gi|293339394|gb|GU595196.1|	63388	.	G	A	5595.90	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.557;DP=3109;Dels=0.00;FS=173.338;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.723;QD=41.76;ReadPosRankSum=0.197;SB=-835.22	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:176,0:176:99:0,530,7350	0/0:58,0:58:99:0,175,2422	0/0:96,0:96:99:0,289,4009	0/0:95,0:95:99:0,286,3967	0/0:120,0:120:99:0,361,5011	0/0:147,0:147:99:0,442,6139	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	0/0:186,0:186:99:0,560,7767	0/0:155,0:155:99:0,467,6473	0/0:169,0:169:99:0,509,7057	0/0:155,0:155:99:0,467,6473	0/0:175,0:175:99:0,527,7308	0/0:153,0:153:99:0,461,6389	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	0/0:96,0:96:99:0,289,4009	1/1:0,134:134:99:5596,403,0
gi|293339394|gb|GU595196.1|	63481	.	T	C	6013.51	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.455;DP=2933;Dels=0.00;FS=13.046;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.643;QD=41.76;ReadPosRankSum=-1.004;SB=-2505.64	GT:AD:DP:GQ:PL	0/0:144,0:144:99:0,433,6013	0/0:180,0:180:99:0,542,7517	1/1:0,23:23:69.23:960,69,0	1/1:0,35:35:99:1462,105,0	0/0:74,0:74:99:0,223,3090	0/0:105,0:105:99:0,316,4385	1/1:0,86:86:99:3591,259,0	0/0:187,0:187:99:0,563,7809	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:184,0:184:99:0,554,7684	0/0:196,0:196:99:0,590,8185	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:152,0:152:99:0,458,6348	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:77,0:77:99:0,232,3216	0/0:141,0:141:99:0,424,5888
gi|293339394|gb|GU595196.1|	63553	.	T	A	112.82	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.291;DP=2958;Dels=0.00;FS=12.503;HRun=0;HaplotypeScore=0.2500;InbreedingCoeff=0.9681;MQ=254.00;MQ0=0;MQRankSum=0.318;QD=28.20;ReadPosRankSum=-2.631;SB=-0.02	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:167,0:167:99:0,503,6974	./.	1/1:0,4:4:12.04:167,12,0	0/0:94,0:94:99:0,283,3925	0/0:100,0:100:99:0,301,4176	0/0:126,0:126:99:0,379,5262	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	0/0:189,0:189:99:0,569,7893	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:134,0:134:99:0,403,5596	0/0:185,0:185:99:0,557,7726	0/0:147,0:147:99:0,442,6139	0/0:83,0:83:99:0,250,3466	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	63559	.	C	T	5470.62	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-1.099;DP=2967;Dels=0.00;FS=6.741;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.250;QD=41.76;ReadPosRankSum=-0.414;SB=-2380.36	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:172,0:172:99:0,518,7183	./.	./.	0/0:100,0:100:99:0,301,4176	0/0:95,0:95:99:0,286,3967	1/1:0,131:131:99:5471,394,0	0/0:156,0:156:99:0,470,6515	0/0:172,0:172:99:0,518,7183	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	0/0:186,0:186:99:0,560,7767	0/0:158,0:158:99:0,476,6598	0/0:177,0:177:99:0,533,7392	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:134,0:134:99:0,403,5596	0/0:174,0:174:99:0,524,7266	0/0:155,0:155:99:0,467,6473	0/0:84,0:84:99:0,253,3508	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	63667	.	A	C	7725.68	.	AC=2;AF=0.053;AN=38;BaseQRankSum=0.201;DP=2890;Dels=0.00;FS=0.559;HRun=0;HaplotypeScore=7.6306;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.058;QD=41.76;ReadPosRankSum=-1.001;SB=-3674.93	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	./.	./.	0/0:93,0:93:99:0,280,3884	0/0:86,0:86:99:0,259,3591	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:175,0:175:99:0,527,7308	0/0:163,0:163:99:0,491,6807	0/0:149,0:149:99:0,448,6222	0/0:173,0:173:99:0,521,7225	0/0:154,0:154:99:0,464,6431	0/0:160,0:160:99:0,482,6682	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:158,0:158:99:0,476,6598	0/0:167,0:167:99:0,503,6974	0/0:74,0:74:99:0,223,3090	1/1:0,185:185:99:7726,557,0
gi|293339394|gb|GU595196.1|	63676	.	T	A	7099.28	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-0.167;DP=2883;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=7.8411;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.693;QD=41.76;ReadPosRankSum=-0.241;SB=-3424.37	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:153,0:153:99:0,461,6389	./.	./.	0/0:93,0:93:99:0,280,3884	0/0:102,0:102:99:0,307,4260	1/1:0,170:170:99:7099,512,0	0/0:160,0:160:99:0,482,6682	0/0:193,0:193:99:0,581,8060	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:151,0:151:99:0,455,6306	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	0/0:156,0:156:99:0,470,6515	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:154,0:154:99:0,464,6431	0/0:162,0:162:99:0,488,6765	0/0:72,0:72:99:0,217,3007	0/0:178,0:178:99:0,536,7433
gi|293339394|gb|GU595196.1|	63719	.	T	C	2360.64	.	AC=2;AF=0.053;AN=38;BaseQRankSum=0.460;DP=2793;Dels=0.00;FS=0.483;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.547;QD=40.70;ReadPosRankSum=-4.325;SB=-1169.31	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:160,0:160:99:0,482,6682	./.	./.	0/0:97,0:97:99:0,292,4051	0/0:103,0:103:99:0,310,4301	1/1:0,58:58:99:2422,175,0	0/0:151,0:151:99:0,455,6306	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:149,0:149:99:0,448,6222	0/0:172,0:172:99:0,518,7183	0/0:191,0:191:99:0,575,7976	0/0:171,0:171:99:0,515,7141	0/0:187,0:187:99:0,563,7809	0/0:164,0:164:99:0,494,6849	0/0:143,0:143:99:0,430,5972	0/0:158,0:158:99:0,476,6598	0/0:62,0:62:99:0,187,2589	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	63732	.	C	T	2527.68	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-0.101;DP=2807;Dels=0.00;FS=1.540;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.151;QD=40.77;ReadPosRankSum=-7.390;SB=-1211.07	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:169,0:169:99:0,509,7057	./.	./.	0/0:94,0:94:99:0,283,3925	0/0:106,0:106:99:0,319,4427	1/1:0,62:62:99:2589,187,0	0/0:162,0:162:99:0,488,6765	0/0:148,0:148:99:0,445,6181	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	0/0:158,0:158:99:0,476,6598	0/0:198,0:198:99:0,596,8269	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:151,0:151:99:0,455,6306	0/0:155,0:155:99:0,467,6473	0/0:162,0:162:99:0,488,6765	0/0:64,0:64:99:0,193,2673	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	63736	.	C	A	2652.96	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-1.156;DP=2782;Dels=0.00;FS=0.455;HRun=0;HaplotypeScore=0.8420;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.862;QD=40.81;ReadPosRankSum=-4.247;SB=-1294.59	GT:AD:DP:GQ:PL	0/0:145,0:145:99:0,436,6055	0/0:158,0:158:99:0,476,6598	./.	./.	0/0:90,0:90:99:0,271,3758	0/0:106,0:106:99:0,319,4427	1/1:0,65:65:99:2714,196,0	0/0:164,0:164:99:0,494,6849	0/0:143,0:143:99:0,430,5972	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:160,0:160:99:0,482,6682	0/0:199,0:199:99:0,599,8310	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:150,0:150:99:0,452,6264	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:62,0:62:99:0,187,2589	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	63768	.	T	C	794.35	.	AC=3;AF=0.075;AN=40;BaseQRankSum=-0.923;DP=2342;Dels=0.00;FS=119.585;HRun=2;HaplotypeScore=1.3498;InbreedingCoeff=0.6396;MQ=254.00;MQ0=0;MQRankSum=-0.471;QD=8.73;ReadPosRankSum=-4.863;SB=-0.02	GT:AD:DP:GQ:PL	0/0:141,0:141:99:0,424,5888	0/0:123,0:123:99:0,370,5137	./.	1/1:0,18:18:54.18:752,54,0	0/1:65,8:73:99:114,0,2495	0/0:101,1:102:99:0,265,4176	0/0:132,0:132:99:0,397,5512	0/0:124,0:124:99:0,373,5178	0/0:129,0:129:99:0,388,5387	0/0:133,0:133:99:0,400,5554	0/0:122,0:122:99:0,367,5095	0/0:135,0:135:99:0,406,5638	0/0:130,0:130:99:0,391,5429	0/0:143,0:143:99:0,430,5972	0/0:117,0:117:99:0,352,4886	0/0:125,0:125:99:0,376,5220	0/0:118,0:118:99:0,355,4928	0/0:132,0:132:99:0,397,5512	0/0:146,0:146:99:0,439,6097	0/0:57,0:57:99:0,172,2380	0/0:142,0:142:99:0,427,5930
gi|293339394|gb|GU595196.1|	63781	.	T	C	827.46	.	AC=3;AF=0.075;AN=40;BaseQRankSum=-1.275;DP=2037;Dels=0.00;FS=168.682;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.6396;MQ=254.00;MQ0=0;MQRankSum=0.381;QD=10.34;ReadPosRankSum=4.901;SB=-3.28	GT:AD:DP:GQ:PL	0/0:129,0:129:99:0,388,5387	0/0:121,0:121:99:0,364,5053	./.	1/1:0,18:18:54.18:752,54,0	0/1:54,8:62:99:147,0,2068	0/0:83,1:84:99:0,211,3424	0/0:111,0:111:99:0,334,4635	0/0:105,0:105:99:0,316,4385	0/0:121,0:121:99:0,364,5053	0/0:106,0:106:99:0,319,4427	0/0:104,0:104:99:0,313,4343	0/0:108,0:108:99:0,325,4510	0/0:111,0:111:99:0,334,4635	0/0:115,0:115:99:0,346,4802	0/0:99,0:99:99:0,298,4134	0/0:117,0:117:99:0,352,4886	0/0:103,0:103:99:0,310,4301	0/0:112,0:112:99:0,337,4677	0/0:131,0:131:99:0,394,5471	0/0:58,1:59:99:0,136,2380	0/0:121,0:121:99:0,364,5053
gi|293339394|gb|GU595196.1|	63818	.	A	G	7224.56	.	AC=6;AF=0.150;AN=40;BaseQRankSum=0.040;DP=1534;Dels=0.00;FS=26.761;HRun=0;HaplotypeScore=0.1500;InbreedingCoeff=0.9375;MQ=254.00;MQ0=0;MQRankSum=1.801;QD=41.28;ReadPosRankSum=3.659;SB=-870.24	GT:AD:DP:GQ:PL	0/0:96,0:96:99:0,289,4009	0/0:111,0:111:99:0,334,4635	./.	0/0:1,0:1:3.01:0,3,42	0/0:49,0:49:99:0,147,2046	1/1:0,44:44:99:1837,132,0	0/0:73,0:73:99:0,220,3049	0/0:83,0:83:99:0,250,3466	0/0:88,0:88:99:0,265,3675	0/0:87,0:87:99:0,262,3633	0/0:81,0:81:99:0,244,3383	0/0:87,0:87:99:0,262,3633	0/0:77,0:77:99:0,232,3216	0/0:90,0:90:99:0,271,3758	0/0:78,0:78:99:0,235,3257	0/0:83,0:83:99:0,250,3466	0/0:91,0:91:99:0,274,3800	0/0:87,0:87:99:0,262,3633	0/0:97,0:97:99:0,292,4051	1/1:1,33:34:60.58:1336,61,0	1/1:0,97:97:99:4051,292,0
gi|293339394|gb|GU595196.1|	63819	.	T	C	7224.56	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.897;DP=1531;Dels=0.00;FS=39.585;HRun=0;HaplotypeScore=0.1500;InbreedingCoeff=0.9462;MQ=254.00;MQ0=0;MQRankSum=-0.426;QD=41.76;ReadPosRankSum=3.541;SB=-946.36	GT:AD:DP:GQ:PL	0/0:95,0:95:99:0,286,3967	0/0:107,0:107:99:0,322,4468	./.	1/1:0,1:1:3.01:42,3,0	0/0:51,1:52:99:0,115,2088	1/1:0,43:43:99:1796,129,0	0/0:75,0:75:99:0,226,3132	0/0:80,0:80:99:0,241,3341	0/0:87,0:87:99:0,262,3633	0/0:88,0:88:99:0,265,3675	0/0:81,0:81:99:0,244,3383	0/0:87,0:87:99:0,262,3633	0/0:78,0:78:99:0,235,3257	0/0:92,0:92:99:0,277,3842	0/0:79,0:79:99:0,238,3299	0/0:83,0:83:99:0,250,3466	0/0:90,0:90:99:0,271,3758	0/0:86,0:86:99:0,259,3591	0/0:98,0:98:99:0,295,4093	1/1:0,32:32:96.32:1336,96,0	1/1:0,97:97:99:4051,292,0
gi|293339394|gb|GU595196.1|	63857	.	G	A	5888.23	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-1.372;DP=1428;Dels=0.00;FS=14.388;HRun=0;HaplotypeScore=1.5787;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.432;QD=41.76;ReadPosRankSum=2.919;SB=-125.30	GT:AD:DP:GQ:PL	0/0:76,0:76:99:0,229,3174	0/0:94,0:94:99:0,283,3925	./.	./.	0/0:43,0:43:99:0,129,1796	1/1:0,30:30:90.30:1253,90,0	0/0:76,0:76:99:0,229,3174	0/0:61,0:61:99:0,184,2547	0/0:99,0:99:99:0,298,4134	0/0:94,0:94:99:0,283,3925	0/0:77,0:77:99:0,232,3216	0/0:90,0:90:99:0,271,3758	0/0:96,0:96:99:0,289,4009	0/0:90,0:90:99:0,271,3758	0/0:80,0:80:99:0,241,3341	0/0:84,0:84:99:0,253,3508	0/0:71,0:71:99:0,214,2965	0/0:73,0:73:99:0,220,3049	0/0:83,0:83:99:0,250,3466	1/1:0,28:28:84.28:1169,84,0	1/1:0,83:83:99:3466,250,0
gi|293339394|gb|GU595196.1|	63861	.	G	T	1316.63	.	AC=2;AF=0.053;AN=38;BaseQRankSum=0.295;DP=1433;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=1.7366;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.014;QD=39.90;ReadPosRankSum=0.861;SB=-0.02	GT:AD:DP:GQ:PL	0/0:76,0:76:99:0,229,3174	0/0:95,0:95:99:0,286,3967	./.	./.	0/0:46,0:46:99:0,138,1921	1/1:0,33:33:99:1378,99,0	0/0:75,0:75:99:0,226,3132	0/0:62,0:62:99:0,187,2589	0/0:104,0:104:99:0,313,4343	0/0:85,0:85:99:0,256,3550	0/0:71,0:71:99:0,214,2965	0/0:88,0:88:99:0,265,3675	0/0:105,0:105:99:0,316,4385	0/0:84,0:84:99:0,253,3508	0/0:84,0:84:99:0,253,3508	0/0:75,0:75:99:0,226,3132	0/0:70,0:70:99:0,211,2923	0/0:71,0:71:99:0,214,2965	0/0:83,0:83:99:0,250,3466	0/0:32,0:32:96.32:0,96,1336	0/0:94,0:94:99:0,283,3925
gi|293339394|gb|GU595196.1|	63934	.	G	A,C	7496.13	.	AC=3,3;AF=0.071,0.071;AN=42;BaseQRankSum=0.248;DP=2341;Dels=0.00;FS=145.043;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.680;QD=25.07;ReadPosRankSum=1.452;SB=-1928.44	GT:AD:DP:GQ:PL	0/0:128,0,0:128:99:0,385,5345,385,5345,5345	0/0:117,0,0:117:99:0,352,4886,352,4886,4886	0/0:34,0,0:34:99:0,102,1420,102,1420,1420	0/0:87,0,0:87:99:0,262,3633,262,3633,3633	0/1:47,14,0:61:99:401,0,1779,543,1821,2364	1/2:0,16,69:85:99:3294,2674,2626,620,0,412	0/0:98,0,0:98:99:0,295,4093,295,4093,4093	0/0:101,0,0:101:99:0,304,4218,304,4218,4218	0/0:122,0,0:122:99:0,367,5095,367,5095,5095	0/0:137,0,0:137:99:0,412,5721,412,5721,5721	0/0:110,0,0:110:99:0,331,4594,331,4594,4594	0/0:117,0,0:117:99:0,352,4886,352,4886,4886	0/0:132,0,0:132:99:0,397,5512,397,5512,5512	0/0:148,0,0:148:99:0,445,6181,445,6181,6181	0/0:162,0,0:162:99:0,488,6765,488,6765,6765	0/0:140,0,0:140:99:0,421,5846,421,5846,5846	0/0:135,0,0:135:99:0,406,5638,406,5638,5638	0/0:126,0,0:126:99:0,379,5262,379,5262,5262	0/0:148,0,0:148:99:0,445,6181,445,6181,6181	0/1:57,12,0:69:99:293,0,2173,465,2209,2674	2/2:0,0,84:84:99:3508,3508,3508,253,253,0
gi|293339394|gb|GU595196.1|	63956	.	C	A,G	7997.66	.	AC=3,5;AF=0.071,0.119;AN=42;BaseQRankSum=1.265;DP=1439;Dels=0.00;FS=3.453;HaplotypeScore=0.9046;InbreedingCoeff=0.7917;MQ=254.00;MQ0=0;MQRankSum=-0.627;QD=29.51;ReadPosRankSum=1.762;SB=-2409.52	GT:AD:DP:GQ:PL	0/0:63,4,0:67:34.63:0,35,2464,190,2476,2631	0/0:59,3,0:62:61.34:0,61,2339,178,2348,2464	0/0:15,0,0:15:45.15:0,45,626,45,626,626	0/1:36,4,1:41:46.64:47,0,1383,116,1356,1508	0/2:36,0,14:50:99:434,543,1938,0,1395,1353	2/2:0,0,69:69:99:2881,2881,2881,208,208,0	0/0:63,0,0:63:99:0,190,2631,190,2631,2631	0/0:66,0,0:66:99:0,199,2756,199,2756,2756	0/0:72,0,0:72:99:0,217,3007,217,3007,3007	0/0:87,0,0:87:99:0,262,3633,262,3633,3633	0/0:69,0,0:69:99:0,208,2881,208,2881,2881	0/0:73,5,0:78:25.98:0,26,2840,220,2855,3049	0/0:79,2,0:81:99:0,160,3216,238,3222,3299	0/0:94,1,0:95:99:0,244,3884,283,3887,3925	0/0:87,1,0:88:99:0,223,3591,262,3594,3633	0/0:86,4,0:90:99:0,104,3424,259,3436,3591	0/0:81,2,0:83:99:0,166,3299,244,3305,3383	0/0:68,3,0:71:88.43:0,88,2714,205,2723,2840	0/0:79,2,0:81:99:0,160,3216,238,3222,3299	1/1:0,45,0:45:99:1879,135,0,1879,135,1879	2/2:0,0,66:66:99:2756,2756,2756,199,199,0
gi|293339394|gb|GU595196.1|	63961	.	G	A	2091.13	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.223;DP=1160;Dels=0.00;FS=6.873;HRun=1;HaplotypeScore=7.0943;InbreedingCoeff=0.6992;MQ=254.00;MQ0=0;MQRankSum=1.482;QD=12.37;ReadPosRankSum=-1.076;SB=-903.04	GT:AD:DP:GQ:PL	0/0:57,4:61:16.57:0,17,2213	0/1:49,4:53:7.51:8,0,1887	1/1:0,5:5:15.05:209,15,0	1/1:1,19:20:18.44:752,18,0	0/0:34,0:34:99:0,102,1420	0/0:52,0:52:99:0,157,2172	0/0:52,1:53:99:0,118,2130	0/0:62,0:62:99:0,187,2589	0/0:64,0:64:99:0,193,2673	0/0:76,0:76:99:0,229,3174	0/0:57,1:58:99:0,133,2339	0/1:57,5:62:22.18:22,0,2194	0/0:66,2:68:99:0,121,2673	0/0:69,1:70:99:0,169,2840	0/0:72,1:73:99:0,178,2965	0/0:72,4:76:61.72:0,62,2840	0/0:65,2:67:99:0,118,2631	0/0:46,3:49:22.21:0,22,1796	0/0:62,2:64:99:0,109,2506	1/1:0,29:29:87.29:1211,87,0	0/0:64,0:64:99:0,193,2673
gi|293339394|gb|GU595196.1|	63969	.	G	A	162.04	.	AC=1;AF=0.025;AN=40;BaseQRankSum=-0.075;DP=829;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.3500;InbreedingCoeff=-0.0257;MQ=254.00;MQ0=0;MQRankSum=0.327;QD=5.59;ReadPosRankSum=0.188;SB=-0.02	GT:AD:DP:GQ:PL	0/0:44,0:44:99:0,132,1837	0/0:39,0:39:99:0,117,1629	./.	0/0:8,0:8:24.08:0,24,334	0/1:22,7:29:99:205,0,831	0/0:40,0:40:99:0,120,1670	0/0:33,0:33:99:0,99,1378	0/0:48,0:48:99:0,144,2004	0/0:45,0:45:99:0,135,1879	0/0:49,0:49:99:0,147,2046	0/0:42,0:42:99:0,126,1754	0/0:43,0:43:99:0,129,1796	0/0:46,0:46:99:0,138,1921	0/0:49,0:49:99:0,147,2046	0/0:50,0:50:99:0,151,2088	0/0:54,0:54:99:0,163,2255	0/0:52,0:52:99:0,157,2172	0/0:33,0:33:99:0,99,1378	0/0:45,0:45:99:0,135,1879	0/0:19,0:19:57.19:0,57,793	0/0:61,0:61:99:0,184,2547
gi|293339394|gb|GU595196.1|	63990	.	C	T	2181.94	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.304;DP=461;Dels=0.00;FS=9.970;HRun=1;HaplotypeScore=0.3000;InbreedingCoeff=0.6708;MQ=254.00;MQ0=0;MQRankSum=-0.918;QD=26.94;ReadPosRankSum=-0.602;SB=-250.58	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,1295	0/0:20,0:20:60.20:0,60,835	./.	0/1:8,1:9:14.67:15,0,307	0/1:16,5:21:99:146,0,605	1/1:0,20:20:60.20:835,60,0	0/0:20,0:20:60.20:0,60,835	0/0:30,0:30:90.30:0,90,1253	0/0:30,0:30:90.30:0,90,1253	0/0:21,0:21:63.21:0,63,877	0/0:20,0:20:60.20:0,60,835	0/0:22,0:22:66.22:0,66,919	0/0:32,0:32:96.32:0,96,1336	0/0:29,0:29:87.29:0,87,1211	0/0:27,0:27:81.27:0,81,1128	0/0:32,0:32:96.32:0,96,1336	0/0:25,0:25:75.25:0,75,1044	0/0:16,0:16:48.16:0,48,668	0/0:25,0:25:75.25:0,75,1044	1/1:0,3:3:9.03:125,9,0	1/1:0,28:28:84.28:1169,84,0
gi|293339394|gb|GU595196.1|	63995	.	T	C	1213.27	.	AC=5;AF=0.125;AN=40;BaseQRankSum=1.740;DP=382;Dels=0.00;FS=11.222;HRun=1;HaplotypeScore=0.3000;InbreedingCoeff=0.7971;MQ=254.00;MQ0=0;MQRankSum=1.436;QD=36.77;ReadPosRankSum=1.712;SB=-167.13	GT:AD:DP:GQ:PL	0/0:24,0:24:72.24:0,72,1002	0/0:19,0:19:57.19:0,57,793	./.	0/0:7,0:7:21.07:0,21,292	0/0:16,0:16:48.16:0,48,668	0/1:1,11:12:5.64:423,0,6	0/0:16,0:16:48.16:0,48,668	0/0:25,0:25:75.25:0,75,1044	0/0:25,0:25:75.25:0,75,1044	0/0:20,0:20:60.20:0,60,835	0/0:17,0:17:51.17:0,51,710	0/0:18,0:18:54.18:0,54,752	0/0:29,0:29:87.29:0,87,1211	0/0:22,0:22:66.22:0,66,919	0/0:23,0:23:69.23:0,69,960	0/0:27,0:27:81.27:0,81,1128	0/0:23,0:23:69.23:0,69,960	0/0:16,0:16:48.16:0,48,668	0/0:22,0:22:66.22:0,66,919	1/1:0,3:3:9.03:125,9,0	1/1:0,18:18:54.18:752,54,0
gi|293339394|gb|GU595196.1|	64040	.	G	A	431	.	AC=7;AF=0.184;AN=38;BaseQRankSum=0.659;DP=598;Dels=0.00;FS=78.285;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.7028;MQ=254.00;MQ0=0;MQRankSum=0.575;QD=30.79;ReadPosRankSum=1.847;SB=0.35	GT:AD:DP:GQ:PL	0/0:43,0:43:99:0,129,1796	0/0:33,0:33:99:0,99,1378	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	./.	0/1:1,7:8:17.68:268,0,18	0/0:57,0:57:99:0,172,2380	0/0:9,0:9:27.09:0,27,376	0/0:21,0:21:63.21:0,63,877	0/0:48,0:48:99:0,144,2004	0/0:51,0:51:99:0,154,2130	0/0:40,0:40:99:0,120,1670	0/0:43,0:43:99:0,129,1796	0/0:40,0:40:99:0,120,1670	0/0:39,0:39:99:0,117,1629	0/0:38,0:38:99:0,114,1587	0/0:42,0:42:99:0,126,1754	0/0:36,0:36:99:0,108,1503	0/0:44,0:44:99:0,132,1837	./.	1/1:0,2:2:6.02:84,6,0
gi|293339394|gb|GU595196.1|	64067	.	T	C	35.75	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.286;DP=1373;Dels=0.00;FS=26.390;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8822;MQ=254.00;MQ0=0;MQRankSum=1.257;QD=17.88;ReadPosRankSum=-2.966;SB=-14.35	GT:AD:DP:GQ:PL	0/0:106,0:106:99:0,319,4427	0/0:85,0:85:99:0,256,3550	./.	1/1:0,2:2:6.02:84,6,0	./.	./.	0/0:134,0:134:99:0,403,5596	0/0:30,1:31:51.55:0,52,1211	0/0:55,0:55:99:0,166,2297	0/0:103,0:103:99:0,310,4301	0/0:97,0:97:99:0,292,4051	0/0:89,0:89:99:0,268,3717	0/0:109,0:109:99:0,328,4552	0/0:94,0:94:99:0,283,3925	0/0:109,0:109:99:0,328,4552	0/0:87,0:87:99:0,262,3633	0/0:84,0:84:99:0,253,3508	0/0:83,0:83:99:0,250,3466	0/0:105,0:105:99:0,316,4385	./.	./.
gi|293339394|gb|GU595196.1|	64069	.	C	T	74.77	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.510;DP=1387;Dels=0.00;FS=42.683;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9116;MQ=254.00;MQ0=0;MQRankSum=-0.765;QD=24.92;ReadPosRankSum=-3.618;SB=-16.85	GT:AD:DP:GQ:PL	0/0:108,0:108:99:0,325,4510	0/0:85,0:85:99:0,256,3550	./.	1/1:0,3:3:9.03:125,9,0	./.	./.	0/0:134,0:134:99:0,403,5596	0/0:30,2:32:12.80:0,13,1169	0/0:57,0:57:99:0,172,2380	0/0:105,0:105:99:0,316,4385	0/0:96,0:96:99:0,289,4009	0/0:90,0:90:99:0,271,3758	0/0:110,0:110:99:0,331,4594	0/0:94,0:94:99:0,283,3925	0/0:109,0:109:99:0,328,4552	0/0:89,0:89:99:0,268,3717	0/0:86,0:86:99:0,259,3591	0/0:84,0:84:99:0,253,3508	0/0:105,0:105:99:0,316,4385	./.	./.
gi|293339394|gb|GU595196.1|	64170	.	A	T	716.96	.	AC=1;AF=0.025;AN=40;BaseQRankSum=0.185;DP=968;Dels=0.00;FS=3.203;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=-0.0256;MQ=254.00;MQ0=0;MQRankSum=0.862;QD=28.68;ReadPosRankSum=-1.254;SB=-197.15	GT:AD:DP:GQ:PL	0/0:56,0:56:99:0,169,2339	0/0:57,0:57:99:0,172,2380	0/0:16,0:16:48.16:0,48,668	0/0:76,0:76:99:0,229,3174	0/0:13,0:13:39.13:0,39,543	0/0:54,0:54:99:0,163,2255	0/0:60,0:60:99:0,181,2506	0/0:24,0:24:72.24:0,72,1002	0/0:50,0:50:99:0,151,2088	0/0:55,0:55:99:0,166,2297	0/0:40,0:40:99:0,120,1670	0/0:58,0:58:99:0,175,2422	0/0:59,0:59:99:0,178,2464	0/0:60,0:60:99:0,181,2506	0/0:60,0:60:99:0,181,2506	0/0:58,0:58:99:0,175,2422	0/0:49,0:49:99:0,147,2046	0/0:45,0:45:99:0,135,1879	0/0:53,0:53:99:0,160,2213	0/1:5,20:25:99:760,0,134	./.
gi|293339394|gb|GU595196.1|	64182	.	G	A	4510.13	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.020;DP=983;Dels=0.00;FS=39.675;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=1.002;QD=41.76;ReadPosRankSum=1.090;SB=-1905.83	GT:AD:DP:GQ:PL	0/0:54,0:54:99:0,163,2255	0/0:67,0:67:99:0,202,2798	1/1:0,15:15:45.15:626,45,0	0/0:75,0:75:99:0,226,3132	1/1:0,8:8:24.08:334,24,0	1/1:0,43:43:99:1796,129,0	0/0:63,0:63:99:0,190,2631	1/1:0,21:21:63.21:877,63,0	0/0:57,0:57:99:0,172,2380	0/0:63,0:63:99:0,190,2631	0/0:41,0:41:99:0,123,1712	0/0:55,0:55:99:0,166,2297	0/0:60,0:60:99:0,181,2506	0/0:68,0:68:99:0,205,2840	0/0:51,0:51:99:0,154,2130	0/0:55,0:55:99:0,166,2297	0/0:50,0:50:99:0,151,2088	0/0:51,0:51:99:0,154,2130	0/0:65,0:65:99:0,196,2714	1/1:0,21:21:63.21:877,63,0	./.
gi|293339394|gb|GU595196.1|	64229	.	A	T	139.68	.	AC=4;AF=0.105;AN=38;BaseQRankSum=0.511;DP=1259;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.5262;InbreedingCoeff=0.9066;MQ=254.00;MQ0=0;MQRankSum=1.403;QD=27.94;ReadPosRankSum=-3.702;SB=-0.02	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,211,2923	0/0:91,0:91:99:0,274,3800	./.	0/0:60,0:60:99:0,181,2506	1/1:0,2:2:6.02:84,6,0	0/0:55,0:55:99:0,166,2297	0/0:85,0:85:99:0,256,3550	1/1:0,3:3:9.03:125,9,0	0/0:74,0:74:99:0,223,3090	0/0:97,0:97:99:0,292,4051	0/0:70,0:70:99:0,211,2923	0/0:74,0:74:99:0,223,3090	0/0:77,0:77:99:0,232,3216	0/0:76,0:76:99:0,229,3174	0/0:66,0:66:99:0,199,2756	0/0:74,0:74:99:0,223,3090	0/0:73,0:73:99:0,220,3049	0/0:80,0:80:99:0,241,3341	0/0:82,0:82:99:0,247,3424	0/0:50,0:50:99:0,151,2088	./.
gi|293339394|gb|GU595196.1|	64230	.	G	A	369.40	.	AC=3;AF=0.079;AN=38;BaseQRankSum=1.130;DP=1300;Dels=0.00;FS=2.111;HRun=1;HaplotypeScore=0.8420;InbreedingCoeff=0.6180;MQ=254.00;MQ0=0;MQRankSum=-0.630;QD=30.78;ReadPosRankSum=-5.133;SB=-13.98	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,220,3049	0/0:94,0:94:99:0,283,3925	./.	0/0:62,0:62:99:0,187,2589	1/1:0,4:4:12.04:167,12,0	0/0:56,0:56:99:0,169,2339	0/0:88,0:88:99:0,265,3675	0/1:1,7:8:17.68:268,0,18	0/0:73,0:73:99:0,220,3049	0/0:102,0:102:99:0,307,4260	0/0:72,0:72:99:0,217,3007	0/0:73,0:73:99:0,220,3049	0/0:78,0:78:99:0,235,3257	0/0:79,0:79:99:0,238,3299	0/0:69,0:69:99:0,208,2881	0/0:77,0:77:99:0,232,3216	0/0:77,0:77:99:0,232,3216	0/0:84,0:84:99:0,253,3508	0/0:80,0:80:99:0,241,3341	0/0:51,0:51:99:0,154,2130	./.
gi|293339394|gb|GU595196.1|	64231	.	G	A	4551.90	.	AC=4;AF=0.105;AN=38;BaseQRankSum=0.379;DP=1314;Dels=0.00;FS=10.044;HRun=0;HaplotypeScore=0.8420;InbreedingCoeff=0.9913;MQ=254.00;MQ0=0;MQRankSum=-0.218;QD=41.76;ReadPosRankSum=-0.089;SB=-250.58	GT:AD:DP:GQ:PL	0/0:76,0:76:99:0,229,3174	0/0:91,0:91:99:0,274,3800	./.	0/0:63,0:63:99:0,190,2631	0/0:5,0:5:15.05:0,15,209	1/1:0,57:57:99:2380,172,0	0/0:89,0:89:99:0,268,3717	0/0:10,0:10:30.10:0,30,418	0/0:73,0:73:99:0,220,3049	0/0:101,0:101:99:0,304,4218	0/0:75,0:75:99:0,226,3132	0/0:74,0:74:99:0,223,3090	0/0:79,0:79:99:0,238,3299	0/0:81,0:81:99:0,244,3383	0/0:70,0:70:99:0,211,2923	0/0:80,0:80:99:0,241,3341	0/0:75,0:75:99:0,226,3132	0/0:83,0:83:99:0,250,3466	0/0:80,0:80:99:0,241,3341	1/1:0,52:52:99:2172,157,0	./.
gi|293339394|gb|GU595196.1|	64287	.	C	T	112.82	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.390;DP=2093;Dels=0.00;FS=4.920;HRun=0;HaplotypeScore=0.2000;InbreedingCoeff=0.9681;MQ=254.00;MQ0=0;MQRankSum=0.607;QD=28.20;ReadPosRankSum=0.076;SB=-0.02	GT:AD:DP:GQ:PL	0/0:131,0:131:99:0,394,5471	0/0:141,0:141:99:0,424,5888	./.	0/0:100,0:100:99:0,301,4176	0/0:50,0:50:99:0,151,2088	0/0:47,0:47:99:0,141,1963	0/0:162,0:162:99:0,488,6765	0/0:75,0:75:99:0,226,3132	0/0:110,0:110:99:0,331,4594	0/0:138,0:138:99:0,415,5763	0/0:127,0:127:99:0,382,5304	0/0:136,0:136:99:0,409,5679	0/0:117,0:117:99:0,352,4886	0/0:124,0:124:99:0,373,5178	0/0:141,0:141:99:0,424,5888	0/0:107,0:107:99:0,322,4468	0/0:133,0:133:99:0,400,5554	0/0:108,0:108:99:0,325,4510	0/0:116,0:116:99:0,349,4844	0/0:26,0:26:78.26:0,78,1086	1/1:0,4:4:12.04:167,12,0
gi|293339394|gb|GU595196.1|	64293	.	T	C	7344.55	.	AC=7;AF=0.175;AN=40;BaseQRankSum=-2.804;DP=2045;Dels=0.00;FS=260.882;HRun=0;HaplotypeScore=0.2000;InbreedingCoeff=0.8179;MQ=254.00;MQ0=0;MQRankSum=0.779;QD=36.91;ReadPosRankSum=-0.026;SB=-9.74	GT:AD:DP:GQ:PL	0/0:129,0:129:99:0,388,5387	0/0:127,0:127:99:0,382,5304	./.	0/0:102,0:102:99:0,307,4260	1/1:0,50:50:99:2088,151,0	1/1:0,39:39:99:1629,117,0	0/0:161,0:161:99:0,485,6723	0/1:17,68:85:99:2584,0,454	0/0:106,0:106:99:0,319,4427	0/0:134,0:134:99:0,403,5596	0/0:124,0:124:99:0,373,5178	0/0:127,0:127:99:0,382,5304	0/0:117,0:117:99:0,352,4886	0/0:125,0:125:99:0,376,5220	0/0:143,0:143:99:0,430,5972	0/0:103,0:103:99:0,310,4301	0/0:124,0:124:99:0,373,5178	0/0:101,0:101:99:0,304,4218	0/0:119,0:119:99:0,358,4969	1/1:0,25:25:75.25:1044,75,0	0/0:4,0:4:12.04:0,12,167
gi|293339394|gb|GU595196.1|	64322	.	G	T	247.64	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.243;DP=1745;Dels=0.00;FS=4.280;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9120;MQ=254.00;MQ0=0;MQRankSum=1.040;QD=30.95;ReadPosRankSum=-4.503;SB=-0.02	GT:AD:DP:GQ:PL	0/0:97,0:97:99:0,292,4051	0/0:101,0:101:99:0,304,4218	./.	0/0:87,0:87:99:0,262,3633	0/0:47,0:47:99:0,141,1963	1/1:0,3:3:9.03:125,9,0	0/0:122,0:122:99:0,367,5095	0/0:97,0:97:99:0,292,4051	0/0:92,0:92:99:0,277,3842	0/0:115,0:115:99:0,346,4802	0/0:109,0:109:99:0,328,4552	0/0:106,0:106:99:0,319,4427	0/0:126,0:126:99:0,379,5262	0/0:114,0:114:99:0,343,4761	0/0:107,0:107:99:0,322,4468	0/0:104,0:104:99:0,313,4343	0/0:114,0:114:99:0,343,4761	0/0:108,0:108:99:0,325,4510	0/0:91,0:91:99:0,274,3800	1/1:0,2:2:6.02:84,6,0	1/1:0,3:3:9.03:125,9,0
gi|293339394|gb|GU595196.1|	64328	.	T	A	152.85	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.707;DP=1710;Dels=0.00;FS=2.293;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9837;MQ=254.00;MQ0=0;MQRankSum=-0.861;QD=30.57;ReadPosRankSum=-3.634;SB=-0.02	GT:AD:DP:GQ:PL	0/0:98,0:98:99:0,295,4093	0/0:100,0:100:99:0,301,4176	./.	0/0:80,0:80:99:0,241,3341	0/0:44,0:44:99:0,132,1837	./.	0/0:124,0:124:99:0,373,5178	0/0:94,0:94:99:0,283,3925	0/0:85,0:85:99:0,256,3550	0/0:106,0:106:99:0,319,4427	0/0:104,0:104:99:0,313,4343	0/0:99,0:99:99:0,298,4134	0/0:122,0:122:99:0,367,5095	0/0:115,0:115:99:0,346,4802	0/0:110,0:110:99:0,331,4594	0/0:107,0:107:99:0,322,4468	0/0:109,0:109:99:0,328,4552	0/0:114,0:114:99:0,343,4761	0/0:94,0:94:99:0,283,3925	./.	1/1:0,5:5:15.05:209,15,0
gi|293339394|gb|GU595196.1|	64395	.	A	T	68.68	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.174;DP=2601;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.4999;InbreedingCoeff=-0.0526;MQ=254.00;MQ0=0;MQRankSum=-0.112;QD=2.45;ReadPosRankSum=-3.789;SB=-39.51	GT:AD:DP:GQ:PL	0/0:141,0:141:99:0,424,5888	0/0:144,0:144:99:0,433,6013	./.	0/0:188,0:188:99:0,566,7851	0/1:8,3:11:92.17:92,0,301	0/0:70,0:70:99:0,211,2923	0/0:167,0:167:99:0,503,6974	0/1:15,2:17:32.35:32,0,575	0/0:161,0:161:99:0,485,6723	0/0:179,0:179:99:0,539,7475	0/0:139,0:139:99:0,418,5805	0/0:172,0:172:99:0,518,7183	0/0:145,0:145:99:0,436,6055	0/0:180,0:180:99:0,542,7517	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	0/0:150,0:150:99:0,452,6264	0/0:160,0:160:99:0,482,6682	0/0:150,0:150:99:0,452,6264	0/0:53,0:53:99:0,160,2213	0/0:54,0:54:99:0,163,2255
gi|293339394|gb|GU595196.1|	64396	.	T	G	202.94	.	AC=2;AF=0.050;AN=40;BaseQRankSum=1.515;DP=2627;Dels=0.00;FS=5.086;HRun=1;HaplotypeScore=0.6499;InbreedingCoeff=-0.0526;MQ=254.00;MQ0=0;MQRankSum=1.586;QD=8.12;ReadPosRankSum=-4.594;SB=-83.54	GT:AD:DP:GQ:PL	0/0:141,0:141:99:0,424,5888	0/0:146,0:146:99:0,439,6097	./.	0/0:193,0:193:99:0,581,8060	0/1:7,5:12:99:173,0,256	0/0:74,0:74:99:0,223,3090	0/0:169,0:169:99:0,509,7057	0/1:10,3:13:86.15:86,0,378	0/0:163,0:163:99:0,491,6807	0/0:181,0:181:99:0,545,7559	0/0:141,0:141:99:0,424,5888	0/0:174,0:174:99:0,524,7266	0/0:143,0:143:99:0,430,5972	0/0:183,0:183:99:0,551,7642	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	0/0:149,0:149:99:0,448,6222	0/0:53,0:53:99:0,160,2213	0/0:51,0:51:99:0,154,2130
gi|293339394|gb|GU595196.1|	64398	.	T	G	202.94	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.517;DP=2683;Dels=0.00;FS=20.294;HRun=1;HaplotypeScore=0.5999;InbreedingCoeff=-0.0526;MQ=254.00;MQ0=0;MQRankSum=-0.401;QD=8.12;ReadPosRankSum=-4.362;SB=-0.02	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:150,0:150:99:0,452,6264	./.	0/0:197,0:197:99:0,593,8227	0/1:12,4:16:99:119,0,453	0/0:76,0:76:99:0,229,3174	0/0:172,0:172:99:0,518,7183	0/1:5,4:9:99:140,0,182	0/0:169,0:169:99:0,509,7057	0/0:184,0:184:99:0,554,7684	0/0:143,0:143:99:0,430,5972	0/0:177,0:177:99:0,533,7392	0/0:151,0:151:99:0,455,6306	0/0:186,0:186:99:0,560,7767	0/0:163,0:163:99:0,491,6807	0/0:164,0:164:99:0,494,6849	0/0:155,0:155:99:0,467,6473	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	0/0:56,0:56:99:0,169,2339	0/0:49,0:49:99:0,147,2046
gi|293339394|gb|GU595196.1|	64469	.	A	C	6890.47	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.002;DP=3072;Dels=0.00;FS=0.591;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.547;QD=41.76;ReadPosRankSum=-0.868;SB=-3257.32	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:189,0:189:99:0,569,7893	./.	0/0:180,0:180:99:0,542,7517	0/0:77,0:77:99:0,232,3216	1/1:0,103:103:99:4301,310,0	0/0:199,0:199:99:0,599,8310	0/0:133,0:133:99:0,400,5554	0/0:167,0:167:99:0,503,6974	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:181,0:181:99:0,545,7559	0/0:189,0:189:99:0,569,7893	0/0:152,0:152:99:0,458,6348	0/0:152,0:152:99:0,458,6348	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:185,0:185:99:0,557,7726	1/1:0,62:62:99:2589,187,0	0/0:84,0:84:99:0,253,3508
gi|293339394|gb|GU595196.1|	64574	.	C	T	14198.53	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-1.100;DP=2919;Dels=0.00;FS=9.257;HRun=2;HaplotypeScore=4.4494;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.265;QD=41.76;ReadPosRankSum=-1.271;SB=-6138.75	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:160,0:160:99:0,482,6682	./.	1/1:0,183:183:99:7642,551,0	0/0:81,0:81:99:0,244,3383	1/1:0,23:23:69.23:960,69,0	0/0:175,0:175:99:0,527,7308	0/0:142,0:142:99:0,427,5930	0/0:130,0:130:99:0,391,5429	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:176,0:176:99:0,530,7350	0/0:191,0:191:99:0,575,7976	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:145,0:145:99:0,436,6055	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	1/1:0,18:18:54.18:752,54,0	1/1:0,116:116:99:4844,349,0
gi|293339394|gb|GU595196.1|	64584	.	A	C	3716.69	.	AC=6;AF=0.150;AN=40;BaseQRankSum=1.255;DP=2821;Dels=0.00;FS=9.709;HRun=0;HaplotypeScore=4.4494;InbreedingCoeff=0.9777;MQ=254.00;MQ0=0;MQRankSum=-0.487;QD=41.76;ReadPosRankSum=-4.895;SB=-1460.70	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	./.	0/0:175,0:175:99:0,527,7308	0/0:73,0:73:99:0,220,3049	1/1:0,10:10:30.10:418,30,0	0/0:175,0:175:99:0,527,7308	0/0:133,0:133:99:0,400,5554	0/0:150,0:150:99:0,452,6264	0/0:179,0:179:99:0,539,7475	0/0:146,0:146:99:0,439,6097	0/0:168,0:168:99:0,506,7016	0/0:184,0:184:99:0,554,7684	0/0:203,0:203:99:0,611,8477	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:149,0:149:99:0,448,6222	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	1/1:0,3:3:9.03:125,9,0	1/1:0,76:76:99:3174,229,0
gi|293339394|gb|GU595196.1|	64627	.	A	G	7015.75	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.080;DP=2942;Dels=0.00;FS=9.510;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.252;QD=41.76;ReadPosRankSum=-5.391;SB=-3006.76	GT:AD:DP:GQ:PL	0/0:147,0:147:99:0,442,6139	0/0:176,0:176:99:0,530,7350	./.	0/0:166,0:166:99:0,500,6932	0/0:83,0:83:99:0,250,3466	1/1:0,55:55:99:2297,166,0	0/0:193,0:193:99:0,581,8060	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	0/0:190,0:190:99:0,572,7934	0/0:162,0:162:99:0,488,6765	0/0:185,0:185:99:0,557,7726	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	0/0:134,0:134:99:0,403,5596	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:147,0:147:99:0,442,6139	1/1:0,42:42:99:1754,126,0	1/1:0,71:71:99:2965,214,0
gi|293339394|gb|GU595196.1|	64646	.	A	G	13405.09	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-1.541;DP=3163;Dels=0.00;FS=3.189;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.251;QD=41.76;ReadPosRankSum=5.133;SB=-6556.39	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:184,0:184:99:0,554,7684	./.	0/0:178,0:178:99:0,536,7433	0/0:86,0:86:99:0,259,3591	1/1:0,95:95:99:3967,286,0	0/0:182,0:182:99:0,548,7600	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:188,0:188:99:0,566,7851	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	0/0:190,0:190:99:0,572,7934	0/0:153,0:153:99:0,461,6389	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:150,0:150:99:0,452,6264	1/1:0,83:83:99:3466,250,0	1/1:0,143:143:99:5972,430,0
gi|293339394|gb|GU595196.1|	64741	.	C	T	15910.71	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.257;DP=3162;Dels=0.00;FS=8.991;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.884;QD=41.76;ReadPosRankSum=-1.417;SB=-7349.84	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:155,0:155:99:0,467,6473	./.	0/0:193,0:193:99:0,581,8060	0/0:92,0:92:99:0,277,3842	1/1:0,99:99:99:4134,298,0	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:160,0:160:99:0,482,6682	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	0/0:182,0:182:99:0,548,7600	0/0:144,0:144:99:0,433,6013	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:160,0:160:99:0,482,6682	0/0:145,0:145:99:0,436,6055	1/1:0,61:61:99:2547,184,0	1/1:0,221:221:99:9229,665,0
gi|293339394|gb|GU595196.1|	64829	.	G	T	10774.18	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-1.095;DP=3023;Dels=0.00;FS=8.724;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.075;QD=41.76;ReadPosRankSum=0.512;SB=-4718.94	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:166,0:166:99:0,500,6932	./.	1/1:0,131:131:99:5471,394,0	0/0:92,0:92:99:0,277,3842	1/1:0,75:75:99:3132,226,0	0/0:156,0:156:99:0,470,6515	0/0:180,0:180:99:0,542,7517	0/0:190,0:190:99:0,572,7934	0/0:184,0:184:99:0,554,7684	0/0:147,0:147:99:0,442,6139	0/0:170,0:170:99:0,512,7099	0/0:153,0:153:99:0,461,6389	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:184,0:184:99:0,554,7684	0/0:162,0:162:99:0,488,6765	0/0:188,0:188:99:0,566,7851	0/0:148,0:148:99:0,445,6181	1/1:0,52:52:99:2172,157,0	0/0:125,0:125:99:0,376,5220
gi|293339394|gb|GU595196.1|	64847	.	C	A	3111.87	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.220;DP=3009;Dels=0.00;FS=3.125;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.286;QD=40.95;ReadPosRankSum=0.221;SB=-1503.39	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	./.	0/0:128,0:128:99:0,385,5345	0/0:100,0:100:99:0,301,4176	1/1:0,76:76:99:3174,229,0	0/0:147,0:147:99:0,442,6139	0/0:155,0:155:99:0,467,6473	0/0:189,0:189:99:0,569,7893	0/0:174,0:174:99:0,524,7266	0/0:150,0:150:99:0,452,6264	0/0:188,0:188:99:0,566,7851	0/0:165,0:165:99:0,497,6890	0/0:191,0:191:99:0,575,7976	0/0:157,0:157:99:0,473,6556	0/0:185,0:185:99:0,557,7726	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:148,0:148:99:0,445,6181	0/0:57,0:57:99:0,172,2380	0/0:132,0:132:99:0,397,5512
gi|293339394|gb|GU595196.1|	64920	.	A	T	3591.41	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.070;DP=2976;Dels=0.00;FS=0.395;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.585;QD=41.76;ReadPosRankSum=-2.095;SB=-1712.19	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	./.	0/0:133,0:133:99:0,400,5554	0/0:72,0:72:99:0,217,3007	1/1:0,86:86:99:3591,259,0	0/0:177,0:177:99:0,533,7392	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:151,0:151:99:0,455,6306	0/0:162,0:162:99:0,488,6765	0/0:183,0:183:99:0,551,7642	0/0:153,0:153:99:0,461,6389	0/0:168,0:168:99:0,506,7016	0/0:144,0:144:99:0,433,6013	0/0:158,0:158:99:0,476,6598	0/0:159,0:159:99:0,479,6640	0/0:157,0:157:99:0,473,6556	0/0:69,0:69:99:0,208,2881	0/0:172,0:172:99:0,518,7183
gi|293339394|gb|GU595196.1|	64989	.	C	T	3424.37	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.156;DP=3118;Dels=0.00;FS=1.836;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.026;QD=41.76;ReadPosRankSum=-0.718;SB=-1628.67	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	./.	0/0:171,0:171:99:0,515,7141	0/0:91,0:91:99:0,274,3800	0/0:106,0:106:99:0,319,4427	0/0:183,0:183:99:0,551,7642	0/0:140,0:140:99:0,421,5846	0/0:167,0:167:99:0,503,6974	0/0:140,0:140:99:0,421,5846	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	0/0:152,0:152:99:0,458,6348	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	1/1:0,82:82:99:3424,247,0	0/0:181,0:181:99:0,545,7559
gi|293339394|gb|GU595196.1|	65028	.	G	A	21882.43	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.514;DP=2913;Dels=0.00;FS=0.918;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.448;QD=41.76;ReadPosRankSum=6.213;SB=-10815.95	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:197,0:197:99:0,593,8227	./.	1/1:0,111:111:99:4635,334,0	0/0:73,0:73:99:0,220,3049	1/1:0,81:81:99:3383,244,0	1/1:0,139:139:99:5805,418,0	0/0:145,0:145:99:0,436,6055	0/0:185,0:185:99:0,557,7726	0/0:147,0:147:99:0,442,6139	0/0:152,0:152:99:0,458,6348	0/0:194,0:194:99:0,584,8102	0/0:153,0:153:99:0,461,6389	0/0:185,0:185:99:0,557,7726	0/0:161,0:161:99:0,485,6723	0/0:149,0:149:99:0,448,6222	0/0:159,0:159:99:0,479,6640	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	1/1:0,49:49:99:2046,147,0	1/1:0,144:144:99:6013,433,0
gi|293339394|gb|GU595196.1|	65060	.	C	T	2627.18	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-1.870;DP=2475;Dels=0.00;FS=0.944;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9988;MQ=254.00;MQ0=0;MQRankSum=1.125;QD=39.81;ReadPosRankSum=-11.125;SB=-1332.86	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	./.	1/1:0,13:13:39.13:543,39,0	0/0:69,0:69:99:0,208,2881	1/1:0,10:10:30.10:418,30,0	1/1:0,17:17:51.17:710,51,0	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:149,0:149:99:0,448,6222	0/0:162,0:162:99:0,488,6765	0/0:189,0:189:99:0,569,7893	0/0:151,0:151:99:0,455,6306	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:184,0:184:99:0,554,7684	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	1/1:0,7:7:21.07:292,21,0	1/1:0,19:19:57.19:793,57,0
gi|293339394|gb|GU595196.1|	65066	.	A	C	74.76	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.008;DP=2449;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9375;MQ=254.00;MQ0=0;MQRankSum=-1.625;QD=24.92;ReadPosRankSum=-2.938;SB=-39.02	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:177,0:177:99:0,533,7392	./.	./.	0/0:71,0:71:99:0,214,2965	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:184,0:184:99:0,554,7684	0/0:150,0:150:99:0,452,6264	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:183,0:183:99:0,551,7642	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	./.	1/1:0,3:3:9.03:125,9,0
gi|293339394|gb|GU595196.1|	65067	.	G	A	473.95	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-0.395;DP=2471;Dels=0.00;FS=3.731;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8927;MQ=254.00;MQ0=0;MQRankSum=-0.844;QD=33.85;ReadPosRankSum=-6.181;SB=-199.54	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:178,0:178:99:0,536,7433	./.	1/1:0,4:4:12.04:167,12,0	0/0:73,0:73:99:0,220,3049	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:150,0:150:99:0,452,6264	0/0:180,0:180:99:0,542,7517	0/0:181,0:181:99:0,545,7559	0/0:164,0:164:99:0,494,6849	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	0/0:185,0:185:99:0,557,7726	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:12.04:167,12,0
gi|293339394|gb|GU595196.1|	65087	.	C	T	4510.13	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.384;DP=2821;Dels=0.00;FS=0.353;HRun=1;HaplotypeScore=5.3993;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.295;QD=41.76;ReadPosRankSum=-3.473;SB=-2213.32	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:156,0:156:99:0,470,6515	./.	1/1:0,74:74:99:3090,223,0	0/0:80,0:80:99:0,241,3341	0/0:42,0:42:99:0,126,1754	0/0:89,0:89:99:0,268,3717	0/0:151,0:151:99:0,455,6306	0/0:185,0:185:99:0,557,7726	0/0:155,0:155:99:0,467,6473	0/0:177,0:177:99:0,533,7392	0/0:202,0:202:99:0,608,8436	0/0:175,0:175:99:0,527,7308	0/0:149,0:149:99:0,448,6222	0/0:176,0:176:99:0,530,7350	0/0:180,0:180:99:0,542,7517	0/0:169,0:169:99:0,509,7057	0/0:192,0:192:99:0,578,8018	0/0:168,0:168:99:0,506,7016	1/1:0,34:34:99:1420,102,0	0/0:109,0:109:99:0,328,4552
gi|293339394|gb|GU595196.1|	65096	.	C	A	8602.65	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.185;DP=2970;Dels=0.00;FS=5.052;HRun=0;HaplotypeScore=5.3993;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.101;QD=41.76;ReadPosRankSum=0.192;SB=-4092.53	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:145,0:145:99:0,436,6055	./.	0/0:105,0:105:99:0,316,4385	0/0:85,0:85:99:0,256,3550	1/1:0,69:69:99:2881,208,0	1/1:0,137:137:99:5721,412,0	0/0:157,0:157:99:0,473,6556	0/0:181,0:181:99:0,545,7559	0/0:152,0:152:99:0,458,6348	0/0:170,0:170:99:0,512,7099	0/0:201,0:201:99:0,605,8394	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	0/0:176,0:176:99:0,530,7350	0/0:183,0:183:99:0,551,7642	0/0:155,0:155:99:0,467,6473	0/0:188,0:188:99:0,566,7851	0/0:176,0:176:99:0,530,7350	0/0:59,0:59:99:0,178,2464	0/0:139,0:139:99:0,418,5805
gi|293339394|gb|GU595196.1|	65171	.	C	A	4969.50	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.107;DP=3054;Dels=0.00;FS=0.335;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.284;QD=41.76;ReadPosRankSum=1.497;SB=-2463.88	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:166,0:166:99:0,500,6932	./.	0/0:160,0:160:99:0,482,6682	0/0:80,0:80:99:0,241,3341	0/0:94,0:94:99:0,283,3925	0/0:180,0:180:99:0,542,7517	0/0:152,0:152:99:0,458,6348	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:186,0:186:99:0,560,7767	0/0:161,0:161:99:0,485,6723	0/0:187,0:187:99:0,563,7809	0/0:162,0:162:99:0,488,6765	0/0:152,0:152:99:0,458,6348	0/0:177,0:177:99:0,533,7392	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:87,0:87:99:0,262,3633	1/1:0,119:119:99:4969,358,0
gi|293339394|gb|GU595196.1|	65193	.	G	A	4259.57	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.613;DP=3018;Dels=0.00;FS=3.178;HRun=2;HaplotypeScore=5.0993;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.168;QD=41.76;ReadPosRankSum=-5.460;SB=-1920.99	GT:AD:DP:GQ:PL	0/0:145,0:145:99:0,436,6055	0/0:156,0:156:99:0,470,6515	./.	0/0:151,0:151:99:0,455,6306	0/0:79,0:79:99:0,238,3299	0/0:109,0:109:99:0,328,4552	0/0:174,0:174:99:0,524,7266	0/0:152,0:152:99:0,458,6348	0/0:151,0:151:99:0,455,6306	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:158,0:158:99:0,476,6598	0/0:183,0:183:99:0,551,7642	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:187,0:187:99:0,563,7809	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:86,0:86:99:0,259,3591	1/1:0,102:102:99:4260,307,0
gi|293339394|gb|GU595196.1|	65198	.	T	C	14198.53	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.934;DP=3060;Dels=0.00;FS=9.705;HRun=0;HaplotypeScore=3.8995;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.598;QD=41.76;ReadPosRankSum=-0.377;SB=-6264.07	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:169,0:169:99:0,509,7057	./.	1/1:0,158:158:99:6598,476,0	0/0:80,0:80:99:0,241,3341	0/0:113,0:113:99:0,340,4719	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	0/0:159,0:159:99:0,479,6640	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:161,0:161:99:0,485,6723	0/0:191,0:191:99:0,575,7976	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:191,0:191:99:0,575,7976	0/0:175,0:175:99:0,527,7308	0/0:158,0:158:99:0,476,6598	1/1:0,87:87:99:3633,262,0	1/1:0,95:95:99:3967,286,0
gi|293339394|gb|GU595196.1|	65246	.	C	G	6180.55	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.824;DP=3058;Dels=0.00;FS=1.716;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.541;QD=41.76;ReadPosRankSum=-0.036;SB=-3090.28	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:168,0:168:99:0,506,7016	./.	0/0:104,0:104:99:0,313,4343	0/0:97,0:97:99:0,292,4051	0/0:75,0:75:99:0,226,3132	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:179,0:179:99:0,539,7475	0/0:147,0:147:99:0,442,6139	0/0:161,0:161:99:0,485,6723	0/0:193,0:193:99:0,581,8060	0/0:189,0:189:99:0,569,7893	0/0:184,0:184:99:0,554,7684	0/0:179,0:179:99:0,539,7475	0/0:155,0:155:99:0,467,6473	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:73,0:73:99:0,220,3049	1/1:0,148:148:99:6181,445,0
gi|293339394|gb|GU595196.1|	65280	.	C	T	4844.22	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.249;DP=3096;Dels=0.00;FS=32.142;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.557;QD=41.76;ReadPosRankSum=0.361;SB=-1586.91	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	./.	1/1:0,116:116:99:4844,349,0	0/0:89,0:89:99:0,268,3717	0/0:85,0:85:99:0,256,3550	0/0:174,0:174:99:0,524,7266	0/0:198,0:198:99:0,596,8269	0/0:184,0:184:99:0,554,7684	0/0:157,0:157:99:0,473,6556	0/0:186,0:186:99:0,560,7767	0/0:193,0:193:99:0,581,8060	0/0:138,0:138:99:0,415,5763	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:157,0:157:99:0,473,6556	0/0:187,0:187:99:0,563,7809	0/0:71,0:71:99:0,214,2965	0/0:151,0:151:99:0,455,6306
gi|293339394|gb|GU595196.1|	65442	.	C	T	7892.72	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.188;DP=3207;Dels=0.00;FS=15.289;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.308;QD=41.76;ReadPosRankSum=0.708;SB=-3340.85	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	./.	0/0:178,0:178:99:0,536,7433	0/0:86,0:86:99:0,259,3591	0/0:119,0:119:99:0,358,4969	1/1:0,189:189:99:7893,569,0	0/0:170,0:170:99:0,512,7099	0/0:148,0:148:99:0,445,6181	0/0:186,0:186:99:0,560,7767	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:187,0:187:99:0,563,7809	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	0/0:94,0:94:99:0,283,3925	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	65464	.	A	G	5387.10	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-1.704;DP=3147;Dels=0.00;FS=11.437;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.344;QD=41.76;ReadPosRankSum=3.208;SB=-2255.08	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:171,0:171:99:0,515,7141	./.	0/0:178,0:178:99:0,536,7433	0/0:88,0:88:99:0,265,3675	0/0:112,0:112:99:0,337,4677	0/0:185,0:185:99:0,557,7726	0/0:155,0:155:99:0,467,6473	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:194,0:194:99:0,584,8102	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:183,0:183:99:0,551,7642	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:159,0:159:99:0,479,6640	0/0:97,0:97:99:0,292,4051	1/1:0,129:129:99:5387,388,0
gi|293339394|gb|GU595196.1|	65480	.	G	C	2819.55	.	AC=2;AF=0.050;AN=40;BaseQRankSum=1.567;DP=3137;Dels=0.00;FS=8.423;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.872;QD=40.86;ReadPosRankSum=-4.334;SB=-1169.31	GT:AD:DP:GQ:PL	0/0:147,0:147:99:0,442,6139	0/0:174,0:174:99:0,524,7266	./.	0/0:181,0:181:99:0,545,7559	0/0:98,0:98:99:0,295,4093	0/0:116,0:116:99:0,349,4844	0/0:195,0:195:99:0,587,8143	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:197,0:197:99:0,593,8227	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:182,0:182:99:0,548,7600	0/0:191,0:191:99:0,575,7976	0/0:165,0:165:99:0,497,6890	0/0:153,0:153:99:0,461,6389	0/0:180,0:180:99:0,542,7517	0/0:160,0:160:99:0,482,6682	0/0:104,0:104:99:0,313,4343	1/1:0,69:69:99:2881,208,0
gi|293339394|gb|GU595196.1|	65498	.	C	T	2026.10	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-1.934;DP=3087;Dels=0.00;FS=1.099;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.512;QD=40.52;ReadPosRankSum=-1.415;SB=-1002.27	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:163,0:163:99:0,491,6807	./.	0/0:188,0:188:99:0,566,7851	0/0:91,0:91:99:0,274,3800	0/0:126,0:126:99:0,379,5262	0/0:197,0:197:99:0,593,8227	0/0:170,0:170:99:0,512,7099	0/0:138,0:138:99:0,415,5763	0/0:163,0:163:99:0,491,6807	0/0:191,0:191:99:0,575,7976	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:192,0:192:99:0,578,8018	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	0/0:170,0:170:99:0,512,7099	0/0:158,0:158:99:0,476,6598	0/0:98,0:98:99:0,295,4093	1/1:0,50:50:99:2088,151,0
gi|293339394|gb|GU595196.1|	65501	.	C	G	2694.27	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.522;DP=3108;Dels=0.00;FS=0.452;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.825;QD=40.82;ReadPosRankSum=-1.734;SB=-1336.35	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:163,0:163:99:0,491,6807	./.	0/0:200,0:200:99:0,602,8352	0/0:88,0:88:99:0,265,3675	0/0:130,0:130:99:0,391,5429	0/0:195,0:195:99:0,587,8143	0/0:179,0:179:99:0,539,7475	0/0:139,0:139:99:0,418,5805	0/0:160,0:160:99:0,482,6682	0/0:187,0:187:99:0,563,7809	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:185,0:185:99:0,557,7726	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:154,0:154:99:0,464,6431	0/0:96,0:96:99:0,289,4009	1/1:0,66:66:99:2756,199,0
gi|293339394|gb|GU595196.1|	65543	.	G	A	7725.68	.	AC=2;AF=0.050;AN=40;BaseQRankSum=1.112;DP=3144;Dels=0.00;FS=1.181;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.028;QD=41.76;ReadPosRankSum=2.201;SB=-3633.17	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:159,0:159:99:0,479,6640	./.	0/0:176,0:176:99:0,530,7350	0/0:99,0:99:99:0,298,4134	0/0:112,0:112:99:0,337,4677	0/0:194,0:194:99:0,584,8102	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:157,0:157:99:0,473,6556	0/0:150,0:150:99:0,452,6264	0/0:163,0:163:99:0,491,6807	0/0:161,0:161:99:0,485,6723	0/0:146,0:146:99:0,439,6097	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:89,0:89:99:0,268,3717	1/1:0,185:185:99:7726,557,0
gi|293339394|gb|GU595196.1|	65624	.	T	C	3716.69	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.495;DP=3142;Dels=0.00;FS=3.448;HRun=0;HaplotypeScore=4.4494;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.425;QD=41.76;ReadPosRankSum=-1.154;SB=-1712.19	GT:AD:DP:GQ:PL	0/0:144,0:144:99:0,433,6013	0/0:156,0:156:99:0,470,6515	./.	0/0:170,0:170:99:0,512,7099	0/0:97,0:97:99:0,292,4051	0/0:116,0:116:99:0,349,4844	0/0:170,0:170:99:0,512,7099	0/0:185,0:185:99:0,557,7726	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:154,0:154:99:0,464,6431	0/0:191,0:191:99:0,575,7976	0/0:160,0:160:99:0,482,6682	0/0:177,0:177:99:0,533,7392	0/0:158,0:158:99:0,476,6598	0/0:178,0:178:99:0,536,7433	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	1/1:0,89:89:99:3717,268,0	0/0:179,0:179:99:0,539,7475
gi|293339394|gb|GU595196.1|	65625	.	G	A	12444.60	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-1.376;DP=3145;Dels=0.00;FS=4.423;HRun=0;HaplotypeScore=4.3494;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.040;QD=41.76;ReadPosRankSum=0.184;SB=-5846.47	GT:AD:DP:GQ:PL	0/0:138,0:138:99:0,415,5763	0/0:155,0:155:99:0,467,6473	./.	0/0:173,0:173:99:0,521,7225	0/0:97,0:97:99:0,292,4051	1/1:0,116:116:99:4844,349,0	0/0:169,0:169:99:0,509,7057	1/1:0,182:182:99:7600,548,0	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	0/0:148,0:148:99:0,445,6181	0/0:187,0:187:99:0,563,7809	0/0:163,0:163:99:0,491,6807	0/0:179,0:179:99:0,539,7475	0/0:161,0:161:99:0,485,6723	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:157,0:157:99:0,473,6556	0/0:89,0:89:99:0,268,3717	0/0:180,0:180:99:0,542,7517
gi|293339394|gb|GU595196.1|	65637	.	A	G	11985.23	.	AC=4;AF=0.100;AN=40;BaseQRankSum=0.256;DP=3103;Dels=0.00;FS=4.522;HRun=0;HaplotypeScore=7.8490;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.434;QD=41.76;ReadPosRankSum=0.552;SB=-5762.94	GT:AD:DP:GQ:PL	0/0:138,0:138:99:0,415,5763	0/0:159,0:159:99:0,479,6640	./.	0/0:170,0:170:99:0,512,7099	0/0:94,0:94:99:0,283,3925	1/1:0,111:111:99:4635,334,0	0/0:158,0:158:99:0,476,6598	1/1:0,176:176:99:7350,530,0	0/0:149,0:149:99:0,448,6222	0/0:181,0:181:99:0,545,7559	0/0:148,0:148:99:0,445,6181	0/0:187,0:187:99:0,563,7809	0/0:148,0:148:99:0,445,6181	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:94,0:94:99:0,283,3925	0/0:168,0:168:99:0,506,7016
gi|293339394|gb|GU595196.1|	65640	.	T	C	6973.99	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.552;DP=3133;Dels=0.00;FS=4.684;HRun=0;HaplotypeScore=8.3489;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.039;QD=41.76;ReadPosRankSum=-0.466;SB=-3173.80	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:162,0:162:99:0,488,6765	./.	0/0:177,0:177:99:0,533,7392	0/0:95,0:95:99:0,286,3967	0/0:105,0:105:99:0,316,4385	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:152,0:152:99:0,458,6348	0/0:182,0:182:99:0,548,7600	0/0:156,0:156:99:0,470,6515	0/0:185,0:185:99:0,557,7726	0/0:149,0:149:99:0,448,6222	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:164,0:164:99:0,494,6849	0/0:93,0:93:99:0,280,3884	1/1:0,167:167:99:6974,503,0
gi|293339394|gb|GU595196.1|	65705	.	T	C	20086.74	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-1.483;DP=3233;Dels=0.00;FS=3.386;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.910;QD=41.76;ReadPosRankSum=0.843;SB=-9855.46	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:176,0:176:99:0,530,7350	./.	0/0:193,0:193:99:0,581,8060	0/0:110,0:110:99:0,331,4594	1/1:0,122:122:99:5095,367,0	1/1:0,207:207:99:8644,623,0	1/1:0,152:152:99:6348,458,0	0/0:156,0:156:99:0,470,6515	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:154,0:154:99:0,464,6431	0/0:84,0:84:99:0,253,3508	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	65712	.	C	T	20379.06	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.921;DP=3246;Dels=0.00;FS=0.936;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.035;QD=41.76;ReadPosRankSum=0.300;SB=-10147.78	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:177,0:177:99:0,533,7392	./.	0/0:183,0:183:99:0,551,7642	0/0:109,0:109:99:0,328,4552	1/1:0,127:127:99:5304,382,0	1/1:0,202:202:99:8436,608,0	1/1:0,159:159:99:6640,479,0	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:187,0:187:99:0,563,7809	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	0/0:160,0:160:99:0,482,6682	0/0:88,0:88:99:0,265,3675	0/0:166,0:166:99:0,500,6932
gi|293339394|gb|GU595196.1|	65748	.	G	A	6556.39	.	AC=2;AF=0.050;AN=40;BaseQRankSum=1.239;DP=3073;Dels=0.00;FS=1.657;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.869;QD=41.76;ReadPosRankSum=0.343;SB=-3173.80	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:169,0:169:99:0,509,7057	./.	1/1:0,157:157:99:6556,473,0	0/0:91,0:91:99:0,274,3800	0/0:128,0:128:99:0,385,5345	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:180,0:180:99:0,542,7517	0/0:160,0:160:99:0,482,6682	0/0:193,0:193:99:0,581,8060	0/0:152,0:152:99:0,458,6348	0/0:139,0:139:99:0,418,5805	0/0:144,0:144:99:0,433,6013	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:180,0:180:99:0,542,7517	0/0:77,0:77:99:0,232,3216	0/0:152,0:152:99:0,458,6348
gi|293339394|gb|GU595196.1|	65798	.	T	G	8393.85	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-1.757;DP=3133;Dels=0.00;FS=4.641;HRun=1;HaplotypeScore=7.1990;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.420;QD=41.76;ReadPosRankSum=-2.541;SB=-4009.01	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	./.	0/0:167,0:167:99:0,503,6974	0/0:97,0:97:99:0,292,4051	0/0:108,0:108:99:0,325,4510	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:158,0:158:99:0,476,6598	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:156,0:156:99:0,470,6515	0/0:171,0:171:99:0,515,7141	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	0/0:85,0:85:99:0,256,3550	1/1:0,201:201:99:8394,605,0
gi|293339394|gb|GU595196.1|	65807	.	C	T	7433.36	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.546;DP=3129;Dels=0.00;FS=1.915;HRun=1;HaplotypeScore=8.1489;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.962;QD=41.76;ReadPosRankSum=2.080;SB=-3674.93	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	./.	0/0:163,0:163:99:0,491,6807	0/0:94,0:94:99:0,283,3925	0/0:106,0:106:99:0,319,4427	1/1:0,178:178:99:7433,536,0	0/0:154,0:154:99:0,464,6431	0/0:156,0:156:99:0,470,6515	0/0:172,0:172:99:0,518,7183	0/0:161,0:161:99:0,485,6723	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:147,0:147:99:0,442,6139	0/0:85,0:85:99:0,256,3550	0/0:214,0:214:99:0,644,8937
gi|293339394|gb|GU595196.1|	65828	.	T	G	7015.75	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.409;DP=3171;Dels=0.00;FS=1.594;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.319;QD=41.76;ReadPosRankSum=-0.151;SB=-3424.37	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:160,0:160:99:0,482,6682	./.	1/1:0,168:168:99:7016,506,0	0/0:95,0:95:99:0,286,3967	0/0:107,0:107:99:0,322,4468	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:148,0:148:99:0,445,6181	0/0:184,0:184:99:0,554,7684	0/0:154,0:154:99:0,464,6431	0/0:160,0:160:99:0,482,6682	0/0:195,0:195:99:0,587,8143	0/0:179,0:179:99:0,539,7475	0/0:179,0:179:99:0,539,7475	0/0:151,0:151:99:0,455,6306	0/0:87,0:87:99:0,262,3633	0/0:225,0:225:99:0,677,9396
gi|293339394|gb|GU595196.1|	65863	.	A	G	24930.94	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.809;DP=3198;Dels=0.00;FS=8.345;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.238;QD=41.76;ReadPosRankSum=-1.120;SB=-12026.99	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:187,0:187:99:0,563,7809	./.	1/1:0,171:171:99:7141,515,0	0/0:90,0:90:99:0,271,3758	1/1:0,98:98:99:4093,295,0	1/1:0,177:177:99:7392,533,0	1/1:0,151:151:99:6306,455,0	0/0:159,0:159:99:0,479,6640	0/0:208,0:208:99:0,626,8686	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:160,0:160:99:0,482,6682	0/0:177,0:177:99:0,533,7392	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:84,0:84:99:0,253,3508	0/0:199,0:199:99:0,599,8310
gi|293339394|gb|GU595196.1|	65882	.	G	T	28605.85	.	AC=10;AF=0.250;AN=40;BaseQRankSum=1.580;DP=3248;Dels=0.00;FS=4.913;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.835;QD=41.76;ReadPosRankSum=1.225;SB=-13697.41	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:203,0:203:99:0,611,8477	./.	1/1:0,164:164:99:6849,494,0	0/0:92,0:92:99:0,277,3842	1/1:0,104:104:99:4343,313,0	0/0:192,0:192:99:0,578,8018	1/1:0,141:141:99:5888,424,0	0/0:154,0:154:99:0,464,6431	0/0:213,0:213:99:0,641,8895	0/0:191,0:191:99:0,575,7976	0/0:191,0:191:99:0,575,7976	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:161,0:161:99:0,485,6723	0/0:150,0:150:99:0,452,6264	0/0:162,0:162:99:0,488,6765	1/1:0,78:78:99:3257,235,0	1/1:0,198:198:99:8269,596,0
gi|293339394|gb|GU595196.1|	65924	.	C	T	6973.99	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.443;DP=3241;Dels=0.00;FS=2.374;HRun=1;HaplotypeScore=8.3489;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.169;QD=41.76;ReadPosRankSum=1.840;SB=-3340.85	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:154,0:154:99:0,464,6431	./.	1/1:0,167:167:99:6974,503,0	0/0:96,0:96:99:0,289,4009	0/0:108,0:108:99:0,325,4510	0/0:152,0:152:99:0,458,6348	0/0:152,0:152:99:0,458,6348	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:184,0:184:99:0,554,7684	0/0:176,0:176:99:0,530,7350	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	0/0:187,0:187:99:0,563,7809	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:89,0:89:99:0,268,3717	0/0:218,0:218:99:0,656,9104
gi|293339394|gb|GU595196.1|	65933	.	C	T	10982.99	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-1.744;DP=3255;Dels=0.00;FS=14.701;HRun=0;HaplotypeScore=7.1990;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.094;QD=41.76;ReadPosRankSum=1.834;SB=-4844.22	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:158,0:158:99:0,476,6598	./.	0/0:179,0:179:99:0,539,7475	0/0:101,0:101:99:0,304,4218	1/1:0,113:113:99:4719,340,0	0/0:160,0:160:99:0,482,6682	1/1:0,150:150:99:6264,452,0	0/0:175,0:175:99:0,527,7308	0/0:181,0:181:99:0,545,7559	0/0:160,0:160:99:0,482,6682	0/0:182,0:182:99:0,548,7600	0/0:164,0:164:99:0,494,6849	0/0:185,0:185:99:0,557,7726	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	0/0:161,0:161:99:0,485,6723	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	0/0:89,0:89:99:0,268,3717	0/0:221,0:221:99:0,665,9229
gi|293339394|gb|GU595196.1|	65955	.	C	G	6765.19	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.551;DP=3215;Dels=0.00;FS=0.288;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.571;QD=41.76;ReadPosRankSum=1.387;SB=-3382.61	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:181,0:181:99:0,545,7559	./.	1/1:0,162:162:99:6765,488,0	0/0:87,0:87:99:0,262,3633	0/0:116,0:116:99:0,349,4844	0/0:158,0:158:99:0,476,6598	0/0:148,0:148:99:0,445,6181	0/0:171,0:171:99:0,515,7141	0/0:190,0:190:99:0,572,7934	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:189,0:189:99:0,569,7893	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:88,0:88:99:0,265,3675	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	65987	.	T	C	28438.81	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.320;DP=3162;Dels=0.00;FS=4.120;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.677;QD=41.76;ReadPosRankSum=-1.675;SB=-13655.65	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	./.	1/1:0,154:154:99:6431,464,0	0/0:81,0:81:99:0,244,3383	1/1:0,112:112:99:4677,337,0	0/0:179,0:179:99:0,539,7475	1/1:0,141:141:99:5888,424,0	0/0:172,0:172:99:0,518,7183	0/0:183,0:183:99:0,551,7642	0/0:158,0:158:99:0,476,6598	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	1/1:0,71:71:99:2965,214,0	1/1:0,203:203:99:8477,611,0
gi|293339394|gb|GU595196.1|	66027	.	A	C	6472.87	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.326;DP=3228;Dels=0.00;FS=3.372;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.556;QD=41.76;ReadPosRankSum=0.919;SB=-2965.00	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:191,0:191:99:0,575,7976	./.	1/1:0,155:155:99:6473,467,0	0/0:90,0:90:99:0,271,3758	0/0:101,0:101:99:0,304,4218	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	0/0:180,0:180:99:0,542,7517	0/0:188,0:188:99:0,566,7851	0/0:163,0:163:99:0,491,6807	0/0:185,0:185:99:0,557,7726	0/0:186,0:186:99:0,560,7767	0/0:158,0:158:99:0,476,6598	0/0:154,0:154:99:0,464,6431	0/0:149,0:149:99:0,448,6222	0/0:161,0:161:99:0,485,6723	0/0:205,0:205:99:0,617,8561	0/0:149,0:149:99:0,448,6222	0/0:88,0:88:99:0,265,3675	0/0:219,0:219:99:0,659,9146
gi|293339394|gb|GU595196.1|	66057	.	G	T	7266.32	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.447;DP=3259;Dels=0.00;FS=10.639;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.148;QD=41.76;ReadPosRankSum=-1.346;SB=-3048.52	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:188,0:188:99:0,566,7851	./.	1/1:0,174:174:99:7266,524,0	0/0:103,0:103:99:0,310,4301	0/0:100,0:100:99:0,301,4176	0/0:187,0:187:99:0,563,7809	0/0:160,0:160:99:0,482,6682	0/0:199,0:199:99:0,599,8310	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:169,0:169:99:0,509,7057	0/0:183,0:183:99:0,551,7642	0/0:159,0:159:99:0,479,6640	0/0:89,0:89:99:0,268,3717	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	66147	.	A	G	28438.81	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.595;DP=3145;Dels=0.00;FS=1.182;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.843;QD=41.76;ReadPosRankSum=-0.253;SB=-13906.21	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:174,0:174:99:0,524,7266	./.	1/1:0,151:151:99:6306,455,0	0/0:88,0:88:99:0,265,3675	1/1:0,90:90:99:3758,271,0	0/0:180,0:180:99:0,542,7517	1/1:0,153:153:99:6389,461,0	0/0:162,0:162:99:0,488,6765	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	0/0:187,0:187:99:0,563,7809	0/0:152,0:152:99:0,458,6348	0/0:194,0:194:99:0,584,8102	0/0:150,0:150:99:0,452,6264	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:176,0:176:99:0,530,7350	0/0:143,0:143:99:0,430,5972	1/1:0,78:78:99:3257,235,0	1/1:0,209:209:99:8728,629,0
gi|293339394|gb|GU595196.1|	66185	.	T	C	6973.99	.	AC=2;AF=0.050;AN=40;BaseQRankSum=1.577;DP=3173;Dels=0.00;FS=7.538;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.354;QD=41.76;ReadPosRankSum=0.204;SB=-3048.52	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:163,0:163:99:0,491,6807	./.	1/1:0,167:167:99:6974,503,0	0/0:84,0:84:99:0,253,3508	0/0:110,0:110:99:0,331,4594	0/0:173,0:173:99:0,521,7225	0/0:183,0:183:99:0,551,7642	0/0:167,0:167:99:0,503,6974	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:161,0:161:99:0,485,6723	0/0:153,0:153:99:0,461,6389	0/0:174,0:174:99:0,524,7266	0/0:155,0:155:99:0,467,6473	0/0:95,0:95:99:0,286,3967	0/0:195,0:195:99:0,587,8143
gi|293339394|gb|GU595196.1|	66218	.	A	G	6514.63	.	AC=2;AF=0.050;AN=40;BaseQRankSum=1.199;DP=3116;Dels=0.00;FS=0.294;HRun=1;HaplotypeScore=3.6995;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.438;QD=41.76;ReadPosRankSum=0.355;SB=-3173.80	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	./.	1/1:0,156:156:99:6515,470,0	0/0:97,0:97:99:0,292,4051	0/0:102,0:102:99:0,307,4260	0/0:186,0:186:99:0,560,7767	0/0:192,0:192:99:0,578,8018	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	0/0:154,0:154:99:0,464,6431	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	0/0:155,0:155:99:0,467,6473	0/0:167,0:167:99:0,503,6974	0/0:156,0:156:99:0,470,6515	0/0:154,0:154:99:0,464,6431	0/0:187,0:187:99:0,563,7809	0/0:168,0:168:99:0,506,7016	0/0:77,0:77:99:0,232,3216	0/0:170,0:170:99:0,512,7099
gi|293339394|gb|GU595196.1|	66221	.	C	T	3111.87	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-1.830;DP=3103;Dels=0.00;FS=3.112;HRun=0;HaplotypeScore=3.7995;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.196;QD=40.95;ReadPosRankSum=0.847;SB=-1461.63	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:161,0:161:99:0,485,6723	./.	0/0:162,0:162:99:0,488,6765	0/0:98,0:98:99:0,295,4093	0/0:101,0:101:99:0,304,4218	0/0:186,0:186:99:0,560,7767	0/0:185,0:185:99:0,557,7726	0/0:157,0:157:99:0,473,6556	0/0:178,0:178:99:0,536,7433	0/0:152,0:152:99:0,458,6348	0/0:153,0:153:99:0,461,6389	0/0:164,0:164:99:0,494,6849	0/0:154,0:154:99:0,464,6431	0/0:164,0:164:99:0,494,6849	0/0:155,0:155:99:0,467,6473	0/0:155,0:155:99:0,467,6473	0/0:191,0:191:99:0,575,7976	0/0:170,0:170:99:0,512,7099	1/1:0,76:76:99:3174,229,0	0/0:175,0:175:99:0,527,7308
gi|293339394|gb|GU595196.1|	66290	.	C	T	3883.73	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.128;DP=3112;Dels=0.00;FS=2.223;HRun=1;HaplotypeScore=4.6494;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.353;QD=41.76;ReadPosRankSum=2.906;SB=-1753.95	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:188,0:188:99:0,566,7851	./.	1/1:0,93:93:99:3884,280,0	0/0:79,0:79:99:0,238,3299	0/0:97,0:97:99:0,292,4051	0/0:188,0:188:99:0,566,7851	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:149,0:149:99:0,448,6222	0/0:190,0:190:99:0,572,7934	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:176,0:176:99:0,530,7350	0/0:162,0:162:99:0,488,6765	0/0:132,0:132:99:0,397,5512	0/0:182,0:182:99:0,548,7600	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:87,0:87:99:0,262,3633	0/0:188,0:188:99:0,566,7851
gi|293339394|gb|GU595196.1|	66293	.	T	C	26183.75	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-0.320;DP=3090;Dels=0.00;FS=0.846;HRun=1;HaplotypeScore=4.0495;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.805;QD=41.76;ReadPosRankSum=-0.773;SB=-12569.88	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:186,0:186:99:0,560,7767	./.	1/1:0,86:86:99:3591,259,0	0/0:80,0:80:99:0,241,3341	1/1:0,98:98:99:4093,295,0	0/0:196,0:196:99:0,590,8185	1/1:0,166:166:99:6932,500,0	0/0:173,0:173:99:0,521,7225	0/0:146,0:146:99:0,439,6097	0/0:190,0:190:99:0,572,7934	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	0/0:133,0:133:99:0,400,5554	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	1/1:0,87:87:99:3633,262,0	1/1:0,190:190:99:7934,572,0
gi|293339394|gb|GU595196.1|	66320	.	T	C	3633.17	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.867;DP=3035;Dels=0.00;FS=8.898;HRun=0;HaplotypeScore=3.8495;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.493;QD=41.76;ReadPosRankSum=1.355;SB=-1503.39	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:154,0:154:99:0,464,6431	./.	1/1:0,87:87:99:3633,262,0	0/0:80,0:80:99:0,241,3341	0/0:91,0:91:99:0,274,3800	0/0:194,0:194:99:0,584,8102	0/0:166,0:166:99:0,500,6932	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:156,0:156:99:0,470,6515	0/0:160,0:160:99:0,482,6682	0/0:150,0:150:99:0,452,6264	0/0:142,0:142:99:0,427,5930	0/0:190,0:190:99:0,572,7934	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:93,0:93:99:0,280,3884	0/0:184,0:184:99:0,554,7684
gi|293339394|gb|GU595196.1|	66329	.	C	T	3591.41	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.769;DP=3091;Dels=0.00;FS=6.371;HRun=1;HaplotypeScore=4.2994;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.730;QD=41.76;ReadPosRankSum=1.441;SB=-1545.15	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:154,0:154:99:0,464,6431	./.	0/0:115,0:115:99:0,346,4802	0/0:81,0:81:99:0,244,3383	0/0:98,0:98:99:0,295,4093	0/0:189,0:189:99:0,569,7893	0/0:182,0:182:99:0,548,7600	0/0:152,0:152:99:0,458,6348	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:149,0:149:99:0,448,6222	0/0:162,0:162:99:0,488,6765	0/0:149,0:149:99:0,448,6222	0/0:158,0:158:99:0,476,6598	0/0:197,0:197:99:0,593,8227	0/0:165,0:165:99:0,497,6890	0/0:165,0:165:99:0,497,6890	1/1:0,86:86:99:3591,259,0	0/0:202,0:202:99:0,608,8436
gi|293339394|gb|GU595196.1|	66368	.	T	G	7809.20	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.485;DP=3216;Dels=0.00;FS=15.375;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.078;QD=41.76;ReadPosRankSum=-0.626;SB=-3215.56	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:193,0:193:99:0,581,8060	./.	0/0:168,0:168:99:0,506,7016	0/0:94,0:94:99:0,283,3925	0/0:94,0:94:99:0,283,3925	0/0:182,0:182:99:0,548,7600	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:193,0:193:99:0,581,8060	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:150,0:150:99:0,452,6264	0/0:186,0:186:99:0,560,7767	0/0:138,0:138:99:0,415,5763	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	0/0:180,0:180:99:0,542,7517	0/0:180,0:180:99:0,542,7517	0/0:71,0:71:99:0,214,2965	1/1:0,187:187:99:7809,563,0
gi|293339394|gb|GU595196.1|	66379	.	A	G	6681.67	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.157;DP=3172;Dels=0.00;FS=15.453;HRun=0;HaplotypeScore=11.3485;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.384;QD=41.76;ReadPosRankSum=1.720;SB=-2839.72	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:183,0:183:99:0,551,7642	./.	1/1:0,160:160:99:6682,482,0	0/0:102,0:102:99:0,307,4260	0/0:99,0:99:99:0,298,4134	0/0:185,0:185:99:0,557,7726	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:184,0:184:99:0,554,7684	0/0:160,0:160:99:0,482,6682	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	0/0:142,0:142:99:0,427,5930	0/0:150,0:150:99:0,452,6264	0/0:163,0:163:99:0,491,6807	0/0:187,0:187:99:0,563,7809	0/0:178,0:178:99:0,536,7433	0/0:76,0:76:99:0,229,3174	0/0:184,0:184:99:0,554,7684
gi|293339394|gb|GU595196.1|	66380	.	A	G	7767.44	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.739;DP=3180;Dels=0.00;FS=14.666;HRun=0;HaplotypeScore=11.3985;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.822;QD=41.76;ReadPosRankSum=0.235;SB=-3215.56	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:181,0:181:99:0,545,7559	./.	0/0:162,0:162:99:0,488,6765	0/0:101,0:101:99:0,304,4218	0/0:102,0:102:99:0,307,4260	0/0:185,0:185:99:0,557,7726	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:159,0:159:99:0,479,6640	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	0/0:143,0:143:99:0,430,5972	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	0/0:186,0:186:99:0,560,7767	0/0:176,0:176:99:0,530,7350	0/0:76,0:76:99:0,229,3174	1/1:0,186:186:99:7767,560,0
gi|293339394|gb|GU595196.1|	66387	.	G	C	3507.89	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.143;DP=3220;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=11.0985;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.975;QD=41.76;ReadPosRankSum=-0.201;SB=-1712.19	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:186,0:186:99:0,560,7767	./.	0/0:162,0:162:99:0,488,6765	0/0:108,0:108:99:0,325,4510	0/0:105,0:105:99:0,316,4385	0/0:186,0:186:99:0,560,7767	0/0:186,0:186:99:0,560,7767	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:156,0:156:99:0,470,6515	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:148,0:148:99:0,445,6181	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:191,0:191:99:0,575,7976	1/1:0,84:84:99:3508,253,0	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	66412	.	G	A	6389.35	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-1.128;DP=3156;Dels=0.00;FS=4.949;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.194;QD=41.76;ReadPosRankSum=-0.697;SB=-2965.00	GT:AD:DP:GQ:PL	0/0:147,0:147:99:0,442,6139	0/0:182,0:182:99:0,548,7600	./.	1/1:0,153:153:99:6389,461,0	0/0:97,0:97:99:0,292,4051	0/0:123,0:123:99:0,370,5137	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:182,0:182:99:0,548,7600	0/0:139,0:139:99:0,418,5805	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:155,0:155:99:0,467,6473	0/0:175,0:175:99:0,527,7308	0/0:148,0:148:99:0,445,6181	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:197,0:197:99:0,593,8227	0/0:81,0:81:99:0,244,3383	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	66438	.	A	G	11066.51	.	AC=4;AF=0.100;AN=40;BaseQRankSum=0.181;DP=3134;Dels=0.00;FS=9.094;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.382;QD=41.76;ReadPosRankSum=0.503;SB=-5011.26	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:174,0:174:99:0,524,7266	./.	0/0:139,0:139:99:0,418,5805	0/0:98,0:98:99:0,295,4093	1/1:0,95:95:99:3967,286,0	0/0:170,0:170:99:0,512,7099	1/1:0,170:170:99:7099,512,0	0/0:142,0:142:99:0,427,5930	0/0:198,0:198:99:0,596,8269	0/0:152,0:152:99:0,458,6348	0/0:163,0:163:99:0,491,6807	0/0:149,0:149:99:0,448,6222	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	0/0:188,0:188:99:0,566,7851	0/0:185,0:185:99:0,557,7726	0/0:82,0:82:99:0,247,3424	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	66468	.	A	T	8519.13	.	AC=2;AF=0.050;AN=40;BaseQRankSum=1.696;DP=3228;Dels=0.00;FS=3.281;HRun=0;HaplotypeScore=4.4994;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.571;QD=41.76;ReadPosRankSum=-0.501;SB=-4134.29	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	./.	0/0:122,0:122:99:0,367,5095	0/0:93,0:93:99:0,280,3884	0/0:115,0:115:99:0,346,4802	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	0/0:157,0:157:99:0,473,6556	0/0:186,0:186:99:0,560,7767	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:191,0:191:99:0,575,7976	0/0:175,0:175:99:0,527,7308	0/0:194,0:194:99:0,584,8102	0/0:176,0:176:99:0,530,7350	0/0:84,0:84:99:0,253,3508	1/1:0,204:204:99:8519,614,0
gi|293339394|gb|GU595196.1|	66478	.	A	G	3758.45	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.781;DP=3146;Dels=0.00;FS=53.142;HRun=3;HaplotypeScore=7.6490;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.673;QD=41.76;ReadPosRankSum=3.038;SB=-960.51	GT:AD:DP:GQ:PL	0/0:191,0:191:99:0,575,7976	0/0:175,0:175:99:0,527,7308	./.	1/1:0,90:90:99:3758,271,0	0/0:91,0:91:99:0,274,3800	0/0:117,0:117:99:0,352,4886	0/0:163,0:163:99:0,491,6807	0/0:151,0:151:99:0,455,6306	0/0:160,0:160:99:0,482,6682	0/0:187,0:187:99:0,563,7809	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:182,0:182:99:0,548,7600	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:186,0:186:99:0,560,7767	0/0:162,0:162:99:0,488,6765	0/0:177,0:177:99:0,533,7392	0/0:169,0:169:99:0,509,7057	0/0:84,0:84:99:0,253,3508	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	66487	.	C	A	3111.87	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.548;DP=3157;Dels=0.00;FS=14.406;HRun=0;HaplotypeScore=3.5495;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.177;QD=40.95;ReadPosRankSum=0.290;SB=-1211.07	GT:AD:DP:GQ:PL	0/0:191,0:191:99:0,575,7976	0/0:174,0:174:99:0,524,7266	./.	0/0:80,0:80:99:0,241,3341	0/0:84,0:84:99:0,253,3508	0/0:123,0:123:99:0,370,5137	0/0:173,0:173:99:0,521,7225	0/0:151,0:151:99:0,455,6306	0/0:149,0:149:99:0,448,6222	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:191,0:191:99:0,575,7976	0/0:174,0:174:99:0,524,7266	0/0:176,0:176:99:0,530,7350	0/0:183,0:183:99:0,551,7642	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	1/1:0,76:76:99:3174,229,0	0/0:186,0:186:99:0,560,7767
gi|293339394|gb|GU595196.1|	66508	.	T	G	1023.86	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.154;DP=3040;Dels=0.00;FS=13.288;HRun=3;HaplotypeScore=1.7498;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.122;QD=39.38;ReadPosRankSum=-1.066;SB=-334.10	GT:AD:DP:GQ:PL	0/0:201,0:201:99:0,605,8394	0/0:162,0:162:99:0,488,6765	./.	1/1:0,26:26:78.26:1086,78,0	0/0:94,0:94:99:0,283,3925	0/0:112,0:112:99:0,337,4677	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:144,0:144:99:0,433,6013	0/0:168,0:168:99:0,506,7016	0/0:157,0:157:99:0,473,6556	0/0:191,0:191:99:0,575,7976	0/0:83,0:83:99:0,250,3466	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	66511	.	C	T	12152.28	.	AC=4;AF=0.100;AN=40;BaseQRankSum=0.315;DP=3070;Dels=0.00;FS=13.752;HRun=1;HaplotypeScore=1.8498;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.216;QD=41.76;ReadPosRankSum=-0.820;SB=-5220.06	GT:AD:DP:GQ:PL	0/0:201,0:201:99:0,605,8394	0/0:165,0:165:99:0,497,6890	./.	0/0:28,0:28:84.28:0,84,1169	0/0:92,0:92:99:0,277,3842	1/1:0,112:112:99:4677,337,0	0/0:168,0:168:99:0,506,7016	1/1:0,179:179:99:7475,539,0	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:144,0:144:99:0,433,6013	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	0/0:190,0:190:99:0,572,7934	0/0:79,0:79:99:0,238,3299	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	66517	.	A	G	13530.37	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.647;DP=3089;Dels=0.00;FS=10.525;HRun=0;HaplotypeScore=1.2498;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.051;QD=41.76;ReadPosRankSum=-1.394;SB=-5971.52	GT:AD:DP:GQ:PL	0/0:195,0:195:99:0,587,8143	0/0:169,0:169:99:0,509,7057	./.	1/1:0,31:31:93.31:1295,93,0	0/0:95,0:95:99:0,286,3967	1/1:0,112:112:99:4677,337,0	0/0:178,0:178:99:0,536,7433	1/1:0,181:181:99:7559,545,0	0/0:149,0:149:99:0,448,6222	0/0:177,0:177:99:0,533,7392	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:184,0:184:99:0,554,7684	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	0/0:140,0:140:99:0,421,5846	0/0:178,0:178:99:0,536,7433	0/0:151,0:151:99:0,455,6306	0/0:192,0:192:99:0,578,8018	0/0:86,0:86:99:0,259,3591	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	66533	.	T	G	2527.23	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.614;DP=3095;Dels=0.00;FS=25.418;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.029;QD=40.76;ReadPosRankSum=-0.488;SB=-793.47	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	./.	1/1:0,62:62:99:2589,187,0	0/0:98,0:98:99:0,295,4093	0/0:120,0:120:99:0,361,5011	0/0:178,0:178:99:0,536,7433	0/0:174,0:174:99:0,524,7266	0/0:157,0:157:99:0,473,6556	0/0:159,0:159:99:0,479,6640	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:184,0:184:99:0,554,7684	0/0:158,0:158:99:0,476,6598	0/0:163,0:163:99:0,491,6807	0/0:158,0:158:99:0,476,6598	0/0:174,0:174:99:0,524,7266	0/0:164,0:164:99:0,494,6849	0/0:194,0:194:99:0,584,8102	0/0:79,0:79:99:0,238,3299	0/0:174,0:174:99:0,524,7266
gi|293339394|gb|GU595196.1|	66551	.	C	T	10815.95	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.036;DP=3121;Dels=0.00;FS=0.728;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.109;QD=41.76;ReadPosRankSum=-1.993;SB=-5303.58	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	./.	0/0:101,0:101:99:0,304,4218	0/0:100,0:100:99:0,301,4176	0/0:123,0:123:99:0,370,5137	0/0:183,0:183:99:0,551,7642	0/0:149,0:149:99:0,448,6222	0/0:138,0:138:99:0,415,5763	0/0:154,0:154:99:0,464,6431	0/0:197,0:197:99:0,593,8227	0/0:192,0:192:99:0,578,8018	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:179,0:179:99:0,539,7475	0/0:178,0:178:99:0,536,7433	1/1:0,76:76:99:3174,229,0	1/1:0,183:183:99:7642,551,0
gi|293339394|gb|GU595196.1|	66589	.	T	A	3967.25	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.700;DP=3207;Dels=0.00;FS=0.781;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.928;QD=41.76;ReadPosRankSum=-0.882;SB=-1962.75	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	./.	0/0:133,0:133:99:0,400,5554	0/0:94,0:94:99:0,283,3925	0/0:116,0:116:99:0,349,4844	0/0:182,0:182:99:0,548,7600	0/0:178,0:178:99:0,536,7433	0/0:155,0:155:99:0,467,6473	0/0:186,0:186:99:0,560,7767	0/0:150,0:150:99:0,452,6264	0/0:190,0:190:99:0,572,7934	0/0:154,0:154:99:0,464,6431	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:158,0:158:99:0,476,6598	0/0:192,0:192:99:0,578,8018	0/0:158,0:158:99:0,476,6598	1/1:0,95:95:99:3967,286,0	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	66601	.	T	C	12695.16	.	AC=6;AF=0.150;AN=40;BaseQRankSum=0.537;DP=3181;Dels=0.00;FS=0.438;HRun=0;HaplotypeScore=4.8993;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.245;QD=41.76;ReadPosRankSum=4.662;SB=-6264.07	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:167,0:167:99:0,503,6974	./.	1/1:0,108:108:99:4510,325,0	1/1:0,85:85:99:3550,256,0	1/1:0,111:111:99:4635,334,0	0/0:188,0:188:99:0,566,7851	0/0:187,0:187:99:0,563,7809	0/0:161,0:161:99:0,485,6723	0/0:202,0:202:99:0,608,8436	0/0:144,0:144:99:0,433,6013	0/0:188,0:188:99:0,566,7851	0/0:156,0:156:99:0,470,6515	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:190,0:190:99:0,572,7934	0/0:153,0:153:99:0,461,6389	0/0:94,0:94:99:0,283,3925	0/0:207,0:207:99:0,623,8644
gi|293339394|gb|GU595196.1|	66604	.	C	A	4718.94	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.372;DP=3221;Dels=0.00;FS=4.095;HRun=0;HaplotypeScore=5.6492;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.207;QD=41.76;ReadPosRankSum=1.557;SB=-2171.56	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:170,0:170:99:0,512,7099	./.	1/1:0,113:113:99:4719,340,0	0/0:91,0:91:99:0,274,3800	0/0:112,0:112:99:0,337,4677	0/0:182,0:182:99:0,548,7600	0/0:189,0:189:99:0,569,7893	0/0:164,0:164:99:0,494,6849	0/0:203,0:203:99:0,611,8477	0/0:150,0:150:99:0,452,6264	0/0:192,0:192:99:0,578,8018	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:185,0:185:99:0,557,7726	0/0:156,0:156:99:0,470,6515	0/0:89,0:89:99:0,268,3717	0/0:209,0:209:99:0,629,8728
gi|293339394|gb|GU595196.1|	66638	.	G	A	5554.14	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.051;DP=3175;Dels=0.00;FS=8.804;HRun=0;HaplotypeScore=6.6491;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.220;QD=41.76;ReadPosRankSum=3.891;SB=-2338.60	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:157,0:157:99:0,473,6556	./.	1/1:0,133:133:99:5554,400,0	0/0:92,0:92:99:0,277,3842	0/0:100,0:100:99:0,301,4176	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	0/0:186,0:186:99:0,560,7767	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	0/0:186,0:186:99:0,560,7767	0/0:180,0:180:99:0,542,7517	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:161,0:161:99:0,485,6723	0/0:153,0:153:99:0,461,6389	0/0:83,0:83:99:0,250,3466	0/0:218,0:218:99:0,656,9104
gi|293339394|gb|GU595196.1|	66643	.	C	T	7892.72	.	AC=4;AF=0.100;AN=40;BaseQRankSum=0.314;DP=3144;Dels=0.00;FS=19.756;HRun=1;HaplotypeScore=6.6491;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.362;QD=41.76;ReadPosRankSum=-1.345;SB=-3257.32	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:161,0:161:99:0,485,6723	./.	0/0:138,0:138:99:0,415,5763	1/1:0,89:89:99:3717,268,0	1/1:0,100:100:99:4176,301,0	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:151,0:151:99:0,455,6306	0/0:185,0:185:99:0,557,7726	0/0:155,0:155:99:0,467,6473	0/0:172,0:172:99:0,518,7183	0/0:184,0:184:99:0,554,7684	0/0:187,0:187:99:0,563,7809	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:158,0:158:99:0,476,6598	0/0:157,0:157:99:0,473,6556	0/0:76,0:76:99:0,229,3174	0/0:219,0:219:99:0,659,9146
gi|293339394|gb|GU595196.1|	66682	.	G	A	1023.86	.	AC=2;AF=0.050;AN=40;BaseQRankSum=3.087;DP=3100;Dels=0.00;FS=22.507;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.729;QD=39.38;ReadPosRankSum=-6.519;SB=-250.58	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:176,0:176:99:0,530,7350	./.	1/1:0,26:26:78.26:1086,78,0	0/0:86,0:86:99:0,259,3591	0/0:121,0:121:99:0,364,5053	0/0:197,0:197:99:0,593,8227	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	0/0:170,0:170:99:0,512,7099	0/0:150,0:150:99:0,452,6264	0/0:191,0:191:99:0,575,7976	0/0:175,0:175:99:0,527,7308	0/0:177,0:177:99:0,533,7392	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:159,0:159:99:0,479,6640	0/0:180,0:180:99:0,542,7517	0/0:166,0:166:99:0,500,6932	0/0:85,0:85:99:0,256,3550	0/0:212,0:212:99:0,638,8853
gi|293339394|gb|GU595196.1|	66687	.	C	T	152.25	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.937;DP=3062;Dels=0.00;FS=1.650;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9838;MQ=254.00;MQ0=0;MQRankSum=1.681;QD=30.45;ReadPosRankSum=-3.421;SB=-78.59	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:177,0:177:99:0,533,7392	./.	1/1:0,5:5:15.05:209,15,0	0/0:84,0:84:99:0,253,3508	0/0:118,0:118:99:0,355,4928	0/0:187,0:187:99:0,563,7809	0/0:166,0:166:99:0,500,6932	0/0:156,0:156:99:0,470,6515	0/0:175,0:175:99:0,527,7308	0/0:149,0:149:99:0,448,6222	0/0:194,0:194:99:0,584,8102	0/0:178,0:178:99:0,536,7433	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:157,0:157:99:0,473,6556	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:87,0:87:99:0,262,3633	0/0:209,0:209:99:0,629,8728
gi|293339394|gb|GU595196.1|	66723	.	T	C	314.55	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.677;DP=3015;Dels=0.00;FS=2.947;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9990;MQ=254.00;MQ0=0;MQRankSum=-0.260;QD=34.95;ReadPosRankSum=1.846;SB=-122.45	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	./.	1/1:0,9:9:27.09:376,27,0	0/0:105,0:105:99:0,316,4385	0/0:120,0:120:99:0,361,5011	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:154,0:154:99:0,464,6431	0/0:176,0:176:99:0,530,7350	0/0:138,0:138:99:0,415,5763	0/0:174,0:174:99:0,524,7266	0/0:185,0:185:99:0,557,7726	0/0:158,0:158:99:0,476,6598	0/0:137,0:137:99:0,412,5721	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:185,0:185:99:0,557,7726	0/0:181,0:181:99:0,545,7559	0/0:74,0:74:99:0,223,3090	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	66733	.	A	G	522.75	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.087;DP=3025;Dels=0.00;FS=1.023;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.219;QD=37.34;ReadPosRankSum=2.828;SB=-249.45	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:178,0:178:99:0,536,7433	./.	1/1:0,14:14:42.14:585,42,0	0/0:108,0:108:99:0,325,4510	0/0:115,0:115:99:0,346,4802	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:175,0:175:99:0,527,7308	0/0:153,0:153:99:0,461,6389	0/0:180,0:180:99:0,542,7517	0/0:173,0:173:99:0,521,7225	0/0:148,0:148:99:0,445,6181	0/0:150,0:150:99:0,452,6264	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:194,0:194:99:0,584,8102	0/0:174,0:174:99:0,524,7266	0/0:77,0:77:99:0,232,3216	0/0:183,0:183:99:0,551,7642
gi|293339394|gb|GU595196.1|	66757	.	G	T	1316.18	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.614;DP=3097;Dels=0.00;FS=0.647;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.059;QD=39.88;ReadPosRankSum=5.077;SB=-626.42	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	./.	1/1:0,33:33:99:1378,99,0	0/0:112,0:112:99:0,337,4677	0/0:111,0:111:99:0,334,4635	0/0:196,0:196:99:0,590,8185	0/0:161,0:161:99:0,485,6723	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:175,0:175:99:0,527,7308	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:154,0:154:99:0,464,6431	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	0/0:188,0:188:99:0,566,7851	0/0:174,0:174:99:0,524,7266	0/0:85,0:85:99:0,256,3550	0/0:174,0:174:99:0,524,7266
gi|293339394|gb|GU595196.1|	66769	.	C	A	16035.99	.	AC=6;AF=0.150;AN=40;BaseQRankSum=0.880;DP=3121;Dels=0.00;FS=0.193;HRun=0;HaplotypeScore=3.4995;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.531;QD=41.76;ReadPosRankSum=0.813;SB=-7767.44	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:170,0:170:99:0,512,7099	./.	0/0:75,0:75:99:0,226,3132	1/1:0,108:108:99:4510,325,0	1/1:0,106:106:99:4427,319,0	0/0:204,0:204:99:0,614,8519	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:152,0:152:99:0,458,6348	0/0:161,0:161:99:0,485,6723	0/0:185,0:185:99:0,557,7726	0/0:158,0:158:99:0,476,6598	0/0:182,0:182:99:0,548,7600	0/0:159,0:159:99:0,479,6640	0/0:87,0:87:99:0,262,3633	1/1:0,170:170:99:7099,512,0
gi|293339394|gb|GU595196.1|	66775	.	T	C	3925.49	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-1.107;DP=3140;Dels=0.00;FS=3.340;HRun=0;HaplotypeScore=4.6994;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.402;QD=41.76;ReadPosRankSum=-3.134;SB=-1879.23	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	./.	1/1:0,94:94:99:3925,283,0	0/0:105,0:105:99:0,316,4385	0/0:102,0:102:99:0,307,4260	0/0:199,0:199:99:0,599,8310	0/0:163,0:163:99:0,491,6807	0/0:186,0:186:99:0,560,7767	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:163,0:163:99:0,491,6807	0/0:178,0:178:99:0,536,7433	0/0:160,0:160:99:0,482,6682	0/0:94,0:94:99:0,283,3925	0/0:161,0:161:99:0,485,6723
gi|293339394|gb|GU595196.1|	66794	.	A	C	13947.97	.	AC=6;AF=0.150;AN=40;BaseQRankSum=1.746;DP=3070;Dels=0.00;FS=3.453;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.922;QD=41.76;ReadPosRankSum=2.095;SB=-6765.19	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	./.	1/1:0,129:129:99:5387,388,0	1/1:0,94:94:99:3925,283,0	1/1:0,111:111:99:4635,334,0	0/0:172,0:172:99:0,518,7183	0/0:146,0:146:99:0,439,6097	0/0:179,0:179:99:0,539,7475	0/0:169,0:169:99:0,509,7057	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:153,0:153:99:0,461,6389	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:144,0:144:99:0,433,6013	0/0:92,0:92:99:0,277,3842	0/0:159,0:159:99:0,479,6640
gi|293339394|gb|GU595196.1|	66862	.	G	T	2587.05	.	AC=4;AF=0.100;AN=40;BaseQRankSum=0.843;DP=3066;Dels=0.00;FS=3.454;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.199;QD=40.42;ReadPosRankSum=-3.182;SB=-1169.30	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:145,0:145:99:0,436,6055	./.	0/0:143,0:143:99:0,430,5972	1/1:0,23:23:69.23:960,69,0	1/1:0,41:41:99:1712,123,0	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:174,0:174:99:0,524,7266	0/0:155,0:155:99:0,467,6473	0/0:156,0:156:99:0,470,6515	0/0:196,0:196:99:0,590,8185	0/0:197,0:197:99:0,593,8227	0/0:192,0:192:99:0,578,8018	0/0:184,0:184:99:0,554,7684	0/0:167,0:167:99:0,503,6974	0/0:167,0:167:99:0,503,6974	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:88,0:88:99:0,265,3675	0/0:159,0:159:99:0,479,6640
gi|293339394|gb|GU595196.1|	66865	.	C	A	2587.05	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.413;DP=3049;Dels=0.00;FS=3.478;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.242;QD=40.42;ReadPosRankSum=-5.765;SB=-1169.26	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:144,0:144:99:0,433,6013	./.	0/0:149,0:149:99:0,448,6222	1/1:0,21:21:63.21:877,63,0	1/1:0,43:43:99:1796,129,0	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:178,0:178:99:0,536,7433	0/0:161,0:161:99:0,485,6723	0/0:155,0:155:99:0,467,6473	0/0:199,0:199:99:0,599,8310	0/0:193,0:193:99:0,581,8060	0/0:198,0:198:99:0,596,8269	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:91,0:91:99:0,274,3800	0/0:157,0:157:99:0,473,6556
gi|293339394|gb|GU595196.1|	66880	.	G	C	8435.61	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.046;DP=2994;Dels=0.00;FS=13.113;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.875;QD=41.76;ReadPosRankSum=-1.513;SB=-3758.43	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	./.	1/1:0,127:127:99:5304,382,0	1/1:0,30:30:90.30:1253,90,0	1/1:0,45:45:99:1879,135,0	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	0/0:180,0:180:99:0,542,7517	0/0:174,0:174:99:0,524,7266	0/0:148,0:148:99:0,445,6181	0/0:182,0:182:99:0,548,7600	0/0:181,0:181:99:0,545,7559	0/0:180,0:180:99:0,542,7517	0/0:177,0:177:99:0,533,7392	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:85,0:85:99:0,256,3550	0/0:143,0:143:99:0,430,5972
gi|293339394|gb|GU595196.1|	66934	.	G	A	7642.16	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.549;DP=3001;Dels=0.00;FS=88.083;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.126;QD=41.76;ReadPosRankSum=-0.452;SB=-2129.80	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	./.	0/0:87,0:87:99:0,262,3633	0/0:87,0:87:99:0,262,3633	0/0:92,0:92:99:0,277,3842	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:180,0:180:99:0,542,7517	0/0:177,0:177:99:0,533,7392	0/0:164,0:164:99:0,494,6849	0/0:192,0:192:99:0,578,8018	0/0:154,0:154:99:0,464,6431	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	0/0:178,0:178:99:0,536,7433	0/0:184,0:184:99:0,554,7684	0/0:191,0:191:99:0,575,7976	0/0:154,0:154:99:0,464,6431	1/1:0,65:65:99:2714,196,0	1/1:0,118:118:99:4928,355,0
gi|293339394|gb|GU595196.1|	66973	.	T	C	11150.03	.	AC=6;AF=0.150;AN=40;BaseQRankSum=0.381;DP=3030;Dels=0.00;FS=31.837;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.862;QD=41.76;ReadPosRankSum=-1.349;SB=-4259.57	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	./.	1/1:0,102:102:99:4260,307,0	1/1:0,89:89:99:3717,268,0	1/1:0,76:76:99:3174,229,0	0/0:170,0:170:99:0,512,7099	0/0:156,0:156:99:0,470,6515	0/0:179,0:179:99:0,539,7475	0/0:190,0:190:99:0,572,7934	0/0:143,0:143:99:0,430,5972	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:171,0:171:99:0,515,7141	0/0:66,0:66:99:0,199,2756	0/0:157,0:157:99:0,473,6556
gi|293339394|gb|GU595196.1|	66992	.	T	G	3028.35	.	AC=2;AF=0.050;AN=40;BaseQRankSum=2.505;DP=3016;Dels=0.00;FS=58.243;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.129;QD=40.92;ReadPosRankSum=1.069;SB=-668.18	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:172,0:172:99:0,518,7183	./.	0/0:103,0:103:99:0,310,4301	0/0:88,0:88:99:0,265,3675	0/0:90,0:90:99:0,271,3758	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	0/0:183,0:183:99:0,551,7642	0/0:160,0:160:99:0,482,6682	0/0:177,0:177:99:0,533,7392	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	0/0:157,0:157:99:0,473,6556	0/0:163,0:163:99:0,491,6807	0/0:175,0:175:99:0,527,7308	0/0:161,0:161:99:0,485,6723	1/1:0,74:74:99:3090,223,0	0/0:159,0:159:99:0,479,6640
gi|293339394|gb|GU595196.1|	67044	.	A	G	1614.46	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.610;DP=2991;Dels=0.00;FS=167.838;HRun=1;HaplotypeScore=0.3999;InbreedingCoeff=-0.0526;MQ=254.00;MQ0=0;MQRankSum=0.609;QD=7.27;ReadPosRankSum=3.463;SB=-0.02	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:148,0:148:99:0,445,6181	./.	0/1:144,38:182:99:1039,0,5466	0/0:67,0:67:99:0,202,2798	0/0:79,0:79:99:0,238,3299	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:191,0:191:99:0,575,7976	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:180,0:180:99:0,542,7517	0/0:176,0:176:99:0,530,7350	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:157,0:157:99:0,473,6556	0/0:70,0:70:99:0,211,2923	0/1:22,18:40:99:631,0,798
gi|293339394|gb|GU595196.1|	67051	.	G	T	126.30	.	AC=1;AF=0.025;AN=40;BaseQRankSum=0.415;DP=2894;Dels=0.00;FS=1.629;HRun=0;HaplotypeScore=0.3999;InbreedingCoeff=-0.0256;MQ=254.00;MQ0=0;MQRankSum=0.228;QD=4.68;ReadPosRankSum=-4.031;SB=-25.54	GT:AD:DP:GQ:PL	0/0:141,0:141:99:0,424,5888	0/0:147,0:147:99:0,442,6139	./.	0/0:186,0:186:99:0,560,7767	0/0:64,0:64:99:0,193,2673	0/0:82,0:82:99:0,247,3424	0/0:161,0:161:99:0,485,6723	0/0:161,0:161:99:0,485,6723	0/0:191,0:191:99:0,575,7976	0/0:176,0:176:99:0,530,7350	0/0:153,0:153:99:0,461,6389	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	0/0:159,0:159:99:0,479,6640	0/0:154,0:154:99:0,464,6431	0/0:75,0:75:99:0,226,3132	0/1:21,6:27:99:169,0,796
gi|293339394|gb|GU595196.1|	67072	.	G	T	964.40	.	AC=3;AF=0.075;AN=40;BaseQRankSum=0.596;DP=2749;Dels=0.00;FS=115.072;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.6396;MQ=254.00;MQ0=0;MQRankSum=-0.113;QD=10.60;ReadPosRankSum=0.619;SB=-7.92	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:144,0:144:99:0,433,6013	./.	0/0:194,0:194:99:0,584,8102	0/1:61,11:72:99:243,0,2331	0/0:81,4:85:88.81:0,89,3216	0/0:130,0:130:99:0,391,5429	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:158,0:158:99:0,476,6598	0/0:137,0:137:99:0,412,5721	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:147,0:147:99:0,442,6139	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:155,0:155:99:0,467,6473	0/0:151,0:151:99:0,455,6306	0/0:134,0:134:99:0,403,5596	0/0:68,0:68:99:0,205,2840	1/1:0,19:19:57.19:793,57,0
gi|293339394|gb|GU595196.1|	67083	.	A	G	2225.22	.	AC=1;AF=0.025;AN=40;BaseQRankSum=-1.865;DP=2752;Dels=0.00;FS=63.576;HRun=1;HaplotypeScore=0.1000;InbreedingCoeff=-0.0256;MQ=254.00;MQ0=0;MQRankSum=-0.517;QD=34.23;ReadPosRankSum=0.189;SB=-310.88	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:151,0:151:99:0,455,6306	./.	0/0:187,0:187:99:0,563,7809	0/0:66,0:66:99:0,199,2756	0/0:75,0:75:99:0,226,3132	0/0:127,0:127:99:0,382,5304	0/0:159,0:159:99:0,479,6640	0/0:156,0:156:99:0,470,6515	0/0:171,0:171:99:0,515,7141	0/0:134,0:134:99:0,403,5596	0/0:157,0:157:99:0,473,6556	0/0:160,0:160:99:0,482,6682	0/0:175,0:175:99:0,527,7308	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	0/0:146,0:146:99:0,439,6097	0/0:136,0:136:99:0,409,5679	0/1:6,59:65:54.91:2268,0,55	0/0:41,0:41:99:0,123,1712
gi|293339394|gb|GU595196.1|	67105	.	C	T	1417.48	.	AC=1;AF=0.025;AN=40;BaseQRankSum=0.489;DP=2759;Dels=0.00;FS=31.168;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=-0.0255;MQ=254.00;MQ0=0;MQRankSum=0.522;QD=33.75;ReadPosRankSum=7.766;SB=-239.40	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:147,0:147:99:0,442,6139	./.	0/0:189,0:189:99:0,569,7893	0/0:53,0:53:99:0,160,2213	0/0:54,0:54:99:0,163,2255	0/0:138,0:138:99:0,415,5763	0/0:161,0:161:99:0,485,6723	0/0:158,0:158:99:0,476,6598	0/0:194,0:194:99:0,584,8102	0/0:140,0:140:99:0,421,5846	0/0:150,0:150:99:0,452,6264	0/0:171,0:171:99:0,515,7141	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:151,0:151:99:0,455,6306	0/0:154,0:154:99:0,464,6431	0/0:134,0:134:99:0,403,5596	0/0:52,0:52:99:0,157,2172	0/1:4,38:42:40.62:1460,0,41
gi|293339394|gb|GU595196.1|	67134	.	C	T	900.83	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.339;DP=2265;Dels=0.00;FS=8.213;HRun=1;HaplotypeScore=2.1497;InbreedingCoeff=-0.0194;MQ=254.00;MQ0=0;MQRankSum=0.466;QD=31.06;ReadPosRankSum=-5.873;SB=-247.71	GT:AD:DP:GQ:PL	0/0:141,0:141:99:0,424,5888	0/0:140,0:140:99:0,421,5846	./.	0/0:73,0:73:99:0,220,3049	0/0:14,0:14:42.14:0,42,585	0/0:21,0:21:63.21:0,63,877	0/0:131,0:131:99:0,394,5471	0/0:118,0:118:99:0,355,4928	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:149,0:149:99:0,448,6222	0/0:138,0:138:99:0,415,5763	0/0:147,0:147:99:0,442,6139	0/0:143,0:143:99:0,430,5972	0/0:153,0:153:99:0,461,6389	0/0:143,0:143:99:0,430,5972	0/0:139,0:139:99:0,418,5805	0/0:136,0:136:99:0,409,5679	0/0:125,0:125:99:0,376,5220	0/1:3,17:20:65.08:650,0,65	0/1:1,8:9:14.67:307,0,15
gi|293339394|gb|GU595196.1|	67137	.	T	C	570.21	.	AC=3;AF=0.075;AN=40;BaseQRankSum=0.471;DP=2188;Dels=0.00;FS=2.015;HRun=1;HaplotypeScore=1.4998;InbreedingCoeff=0.2891;MQ=254.00;MQ0=0;MQRankSum=0.464;QD=20.36;ReadPosRankSum=-4.573;SB=-294.29	GT:AD:DP:GQ:PL	0/0:139,0:139:99:0,418,5805	0/0:135,0:135:99:0,406,5638	./.	0/0:65,0:65:99:0,196,2714	0/1:10,4:14:99:125,0,375	0/0:15,1:16:6.40:0,6,585	0/0:128,0:128:99:0,385,5345	0/0:119,0:119:99:0,358,4969	0/0:160,0:160:99:0,482,6682	0/0:158,0:158:99:0,476,6598	0/0:144,0:144:99:0,433,6013	0/0:133,0:133:99:0,400,5554	0/0:145,0:145:99:0,436,6055	0/0:137,0:137:99:0,412,5721	0/0:151,0:151:99:0,455,6306	0/0:134,0:134:99:0,403,5596	0/0:134,0:134:99:0,403,5596	0/0:134,0:134:99:0,403,5596	0/0:127,0:127:99:0,382,5304	1/1:1,13:14:0.38:501,0,0	0/0:1,0:1:3.01:0,3,42
gi|293339394|gb|GU595196.1|	67144	.	T	C	2459.32	.	AC=5;AF=0.125;AN=40;BaseQRankSum=-0.096;DP=2014;Dels=0.00;FS=1.030;HRun=1;HaplotypeScore=0.0500;InbreedingCoeff=0.6564;MQ=254.00;MQ0=0;MQRankSum=0.141;QD=37.84;ReadPosRankSum=-6.960;SB=-871.29	GT:AD:DP:GQ:PL	0/0:126,0:126:99:0,379,5262	0/0:138,0:138:99:0,415,5763	./.	1/1:0,44:44:99:1837,132,0	1/1:0,8:8:24.08:334,24,0	0/1:3,10:13:86.15:378,0,86	0/0:117,0:117:99:0,352,4886	0/0:109,0:109:99:0,328,4552	0/0:157,0:157:99:0,473,6556	0/0:152,0:152:99:0,458,6348	0/0:142,0:142:99:0,427,5930	0/0:120,0:120:99:0,361,5011	0/0:125,0:125:99:0,376,5220	0/0:127,0:127:99:0,382,5304	0/0:132,0:132:99:0,397,5512	0/0:123,0:123:99:0,370,5137	0/0:135,0:135:99:0,406,5638	0/0:120,0:120:99:0,361,5011	0/0:124,0:124:99:0,373,5178	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42
gi|293339394|gb|GU595196.1|	67155	.	T	C	118.19	.	AC=5;AF=0.125;AN=40;BaseQRankSum=-0.480;DP=1801;Dels=0.00;FS=1.859;HRun=0;HaplotypeScore=0.2500;InbreedingCoeff=0.5686;MQ=254.00;MQ0=0;MQRankSum=0.437;QD=13.13;ReadPosRankSum=-3.770;SB=-70.67	GT:AD:DP:GQ:PL	0/0:104,0:104:99:0,313,4343	0/0:125,0:125:99:0,376,5220	./.	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	0/1:4,1:5:26.71:27,0,152	0/0:113,0:113:99:0,340,4719	0/0:105,0:105:99:0,316,4385	0/0:164,0:164:99:0,494,6849	0/0:136,0:136:99:0,409,5679	0/0:141,0:141:99:0,424,5888	0/0:118,0:118:99:0,355,4928	0/0:110,0:110:99:0,331,4594	0/0:117,0:117:99:0,352,4886	0/0:115,0:115:99:0,346,4802	0/0:104,0:104:99:0,313,4343	0/0:112,0:112:99:0,337,4677	0/0:108,0:108:99:0,325,4510	0/0:116,0:116:99:0,349,4844	0/0:3,0:3:9.03:0,9,125	0/0:1,0:1:3.01:0,3,42
gi|293339394|gb|GU595196.1|	67156	.	T	C	434.52	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.472;DP=1781;Dels=0.00;FS=30.898;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8727;MQ=254.00;MQ0=0;MQRankSum=0.504;QD=33.42;ReadPosRankSum=-1.958;SB=-152.87	GT:AD:DP:GQ:PL	0/0:101,0:101:99:0,304,4218	0/0:119,0:119:99:0,358,4969	./.	1/1:0,4:4:12.04:167,12,0	1/1:0,1:1:3.01:42,3,0	1/1:0,4:4:12.04:167,12,0	0/0:111,0:111:99:0,334,4635	0/0:101,2:103:99:0,227,4134	0/0:167,0:167:99:0,503,6974	0/0:136,0:136:99:0,409,5679	0/0:137,0:137:99:0,412,5721	0/0:120,0:120:99:0,361,5011	0/0:110,0:110:99:0,331,4594	0/0:116,0:116:99:0,349,4844	0/0:111,0:111:99:0,334,4635	0/0:101,0:101:99:0,304,4218	0/0:114,0:114:99:0,343,4761	0/0:108,0:108:99:0,325,4510	0/0:114,0:114:99:0,343,4761	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0
gi|293339394|gb|GU595196.1|	67168	.	T	C	2174.77	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.342;DP=1735;Dels=0.00;FS=6.704;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.4864;MQ=254.00;MQ0=0;MQRankSum=1.135;QD=36.25;ReadPosRankSum=-5.287;SB=-424.76	GT:AD:DP:GQ:PL	0/0:94,0:94:99:0,283,3925	0/0:108,0:108:99:0,325,4510	./.	1/1:0,32:32:96.32:1336,96,0	0/1:1,10:11:8.65:384,0,9	0/0:6,0:6:18.06:0,18,251	0/0:103,0:103:99:0,310,4301	0/0:102,0:102:99:0,307,4260	0/0:150,0:150:99:0,452,6264	0/0:131,0:131:99:0,394,5471	0/0:129,0:129:99:0,388,5387	0/0:128,0:128:99:0,385,5345	0/0:104,0:104:99:0,313,4343	0/0:112,0:112:99:0,337,4677	0/0:97,0:97:99:0,292,4051	0/0:95,0:95:99:0,286,3967	0/0:97,0:97:99:0,292,4051	0/0:109,0:109:99:0,328,4552	0/0:104,0:104:99:0,313,4343	0/1:3,14:17:74.11:533,0,74	0/0:6,0:6:18.06:0,18,251
gi|293339394|gb|GU595196.1|	67179	.	C	A	1127.32	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.436;DP=1812;Dels=0.00;FS=4.005;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=-0.0530;MQ=254.00;MQ0=0;MQRankSum=-0.069;QD=30.47;ReadPosRankSum=-0.569;SB=-212.19	GT:AD:DP:GQ:PL	0/0:98,0:98:99:0,295,4093	0/0:106,0:106:99:0,319,4427	./.	0/0:68,0:68:99:0,205,2840	0/0:24,0:24:72.24:0,72,1002	0/0:6,0:6:18.06:0,18,251	0/0:107,0:107:99:0,322,4468	0/0:114,0:114:99:0,343,4761	0/0:145,0:145:99:0,436,6055	0/0:144,0:144:99:0,433,6013	0/0:112,0:112:99:0,337,4677	0/0:132,0:132:99:0,397,5512	0/0:106,0:106:99:0,319,4427	0/0:99,0:99:99:0,298,4134	0/0:106,0:106:99:0,319,4427	0/0:104,0:104:99:0,313,4343	0/0:98,0:98:99:0,295,4093	0/0:109,0:109:99:0,328,4552	0/0:97,0:97:99:0,292,4051	0/1:3,25:28:41:960,0,41	0/1:3,6:9:98.19:223,0,98
gi|293339394|gb|GU595196.1|	67200	.	C	T	7441.95	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.350;DP=2018;Dels=0.00;FS=25.363;HRun=0;HaplotypeScore=4.3494;InbreedingCoeff=0.2157;MQ=254.00;MQ0=0;MQRankSum=1.869;QD=22.69;ReadPosRankSum=-2.424;SB=-993.22	GT:AD:DP:GQ:PL	0/0:108,0:108:99:0,325,4510	0/0:95,0:95:99:0,286,3967	./.	0/0:95,0:95:99:0,286,3967	0/1:49,10:59:99:240,0,1869	0/1:9,18:27:99:670,0,295	1/1:0,95:95:99:3967,286,0	0/0:121,0:121:99:0,364,5053	0/0:136,0:136:99:0,409,5679	0/0:137,0:137:99:0,412,5721	0/0:113,0:113:99:0,340,4719	0/0:146,0:146:99:0,439,6097	0/0:116,0:116:99:0,349,4844	0/0:104,0:104:99:0,313,4343	0/0:107,0:107:99:0,322,4468	0/0:114,0:114:99:0,343,4761	0/0:97,0:97:99:0,292,4051	0/0:109,0:109:99:0,328,4552	0/0:92,0:92:99:0,277,3842	0/1:53,10:63:99:228,0,2024	0/1:22,62:84:99:2336,0,666
gi|293339394|gb|GU595196.1|	67205	.	A	G	227.50	.	AC=1;AF=0.025;AN=40;BaseQRankSum=1.638;DP=2044;Dels=0.00;FS=113.678;HRun=0;HaplotypeScore=4.3494;InbreedingCoeff=-0.0257;MQ=254.00;MQ0=0;MQRankSum=1.140;QD=6.50;ReadPosRankSum=1.175;SB=-22.61	GT:AD:DP:GQ:PL	0/0:108,0:108:99:0,325,4510	0/0:93,0:93:99:0,280,3884	./.	0/0:95,0:95:99:0,286,3967	0/0:75,0:75:99:0,226,3132	0/1:26,9:35:99:270,0,980	0/0:92,0:92:99:0,277,3842	0/0:120,0:120:99:0,361,5011	0/0:135,0:135:99:0,406,5638	0/0:135,0:135:99:0,406,5638	0/0:106,0:106:99:0,319,4427	0/0:142,0:142:99:0,427,5930	0/0:117,0:117:99:0,352,4886	0/0:107,0:107:99:0,322,4468	0/0:110,0:110:99:0,331,4594	0/0:119,0:119:99:0,358,4969	0/0:100,0:100:99:0,301,4176	0/0:104,0:104:99:0,313,4343	0/0:90,0:90:99:0,271,3758	0/0:64,3:67:76.39:0,76,2547	0/0:88,6:94:32.38:0,32,3424
gi|293339394|gb|GU595196.1|	67206	.	T	C	11197.72	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.518;DP=2049;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=4.3494;InbreedingCoeff=0.3750;MQ=254.00;MQ0=0;MQRankSum=-1.062;QD=24.34;ReadPosRankSum=0.749;SB=-2673.79	GT:AD:DP:GQ:PL	0/0:110,0:110:99:0,331,4594	0/0:91,0:91:99:0,274,3800	./.	0/1:41,50:91:99:1814,0,1438	0/1:56,19:75:99:568,0,2113	1/1:0,37:37:99:1545,111,0	1/1:0,92:92:99:3842,277,0	0/0:122,0:122:99:0,367,5095	0/0:132,0:132:99:0,397,5512	0/0:137,0:137:99:0,412,5721	0/0:106,0:106:99:0,319,4427	0/0:140,0:140:99:0,421,5846	0/0:119,0:119:99:0,358,4969	0/0:107,0:107:99:0,322,4468	0/0:112,0:112:99:0,337,4677	0/0:119,0:119:99:0,358,4969	0/0:100,0:100:99:0,301,4176	0/0:101,0:101:99:0,304,4218	0/0:93,0:93:99:0,280,3884	0/1:51,17:68:99:505,0,1925	0/1:20,77:97:99:2924,0,543
gi|293339394|gb|GU595196.1|	67226	.	C	T	5435.99	.	AC=3;AF=0.075;AN=40;BaseQRankSum=0.459;DP=2197;Dels=0.00;FS=19.707;HRun=0;HaplotypeScore=3.0496;InbreedingCoeff=0.6396;MQ=254.00;MQ0=0;MQRankSum=-0.454;QD=33.76;ReadPosRankSum=-2.493;SB=-1898.40	GT:AD:DP:GQ:PL	0/0:118,0:118:99:0,355,4928	0/0:92,0:92:99:0,277,3842	./.	1/1:0,94:94:99:3925,283,0	0/0:90,0:90:99:0,271,3758	0/0:70,1:71:99:0,172,2881	0/0:80,0:80:99:0,241,3341	0/0:127,0:127:99:0,382,5304	0/0:136,0:136:99:0,409,5679	0/0:136,0:136:99:0,409,5679	0/0:109,0:109:99:0,328,4552	0/0:133,0:133:99:0,400,5554	0/0:117,0:117:99:0,352,4886	0/0:106,0:106:99:0,319,4427	0/0:129,0:129:99:0,388,5387	0/0:125,0:125:99:0,376,5220	0/0:116,0:116:99:0,349,4844	0/0:101,0:101:99:0,304,4218	0/0:107,0:107:99:0,322,4468	0/1:26,41:67:99:1511,0,884	0/0:137,6:143:99:0,180,5471
gi|293339394|gb|GU595196.1|	67235	.	G	A	4092.53	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.194;DP=2221;Dels=0.00;FS=1.841;HRun=0;HaplotypeScore=5.4993;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.178;QD=37.20;ReadPosRankSum=-2.312;SB=-1183.22	GT:AD:DP:GQ:PL	0/0:121,0:121:99:0,364,5053	0/0:105,0:105:99:0,316,4385	./.	1/1:6,104:110:80.54:4093,81,0	0/0:88,0:88:99:0,265,3675	0/0:84,0:84:99:0,253,3508	0/0:77,0:77:99:0,232,3216	0/0:124,0:124:99:0,373,5178	0/0:131,0:131:99:0,394,5471	0/0:137,0:137:99:0,412,5721	0/0:115,0:115:99:0,346,4802	0/0:136,0:136:99:0,409,5679	0/0:114,0:114:99:0,343,4761	0/0:115,0:115:99:0,346,4802	0/0:122,0:122:99:0,367,5095	0/0:131,0:131:99:0,394,5471	0/0:119,0:119:99:0,358,4969	0/0:100,0:100:99:0,301,4176	0/0:99,0:99:99:0,298,4134	0/0:59,0:59:99:0,178,2464	0/0:134,0:134:99:0,403,5596
gi|293339394|gb|GU595196.1|	67244	.	G	A	2766.08	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-2.067;DP=2226;Dels=0.00;FS=108.797;HRun=0;HaplotypeScore=5.2850;InbreedingCoeff=0.1160;MQ=254.00;MQ0=0;MQRankSum=-0.566;QD=6.92;ReadPosRankSum=-2.807;SB=-1153.09	GT:AD:DP:GQ:PL	0/0:111,0:111:99:0,334,4635	0/0:103,0:103:99:0,310,4301	1/1:0,1:1:3.01:42,3,0	0/1:103,38:141:99:1162,0,3877	0/0:85,0:85:99:0,256,3550	0/1:78,13:91:99:269,0,2983	0/0:76,0:76:99:0,229,3174	0/0:131,0:131:99:0,394,5471	0/0:127,0:127:99:0,382,5304	0/0:140,0:140:99:0,421,5846	0/0:117,0:117:99:0,352,4886	0/0:127,0:127:99:0,382,5304	0/0:103,0:103:99:0,310,4301	0/0:126,0:126:99:0,379,5262	0/0:127,0:127:99:0,382,5304	0/0:136,0:136:99:0,409,5679	0/0:123,0:123:99:0,370,5137	0/0:96,0:96:99:0,289,4009	0/0:98,0:98:99:0,295,4093	0/1:15,27:42:99:1001,0,500	0/1:107,18:125:99:375,0,4092
gi|293339394|gb|GU595196.1|	67248	.	G	T	300.29	.	AC=1;AF=0.024;AN=42;BaseQRankSum=-1.410;DP=2242;Dels=0.00;FS=76.849;HRun=1;HaplotypeScore=0.8094;InbreedingCoeff=-0.0272;MQ=254.00;MQ0=0;MQRankSum=-0.339;QD=3.19;ReadPosRankSum=-0.272;SB=0.19	GT:AD:DP:GQ:PL	0/0:104,0:104:99:0,313,4343	0/0:105,0:105:99:0,316,4385	0/0:3,0:3:9.03:0,9,125	0/0:158,0:158:99:0,476,6598	0/0:87,0:87:99:0,262,3633	0/1:79,15:94:99:343,0,3016	0/0:74,0:74:99:0,223,3090	0/0:141,0:141:99:0,424,5888	0/0:131,0:131:99:0,394,5471	0/0:140,0:140:99:0,421,5846	0/0:109,0:109:99:0,328,4552	0/0:118,0:118:99:0,355,4928	0/0:103,0:103:99:0,310,4301	0/0:132,0:132:99:0,397,5512	0/0:124,0:124:99:0,373,5178	0/0:142,0:142:99:0,427,5930	0/0:115,0:115:99:0,346,4802	0/0:97,0:97:99:0,292,4051	0/0:103,0:103:99:0,310,4301	0/0:39,0:39:99:0,117,1629	0/0:123,0:123:99:0,370,5137
gi|293339394|gb|GU595196.1|	67286	.	A	G	58	.	AC=1;AF=0.024;AN=42;BaseQRankSum=0.614;DP=2447;Dels=0.00;FS=14.580;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=-0.0251;MQ=254.00;MQ0=0;MQRankSum=0.559;QD=7.25;ReadPosRankSum=-3.231;SB=-0.02	GT:AD:DP:GQ:PL	0/0:134,0:134:99:0,403,5596	0/0:152,0:152:99:0,458,6348	0/0:5,0:5:15.05:0,15,209	0/0:172,0:172:99:0,518,7183	0/0:36,0:36:99:0,108,1503	0/0:41,0:41:99:0,123,1712	0/0:106,0:106:99:0,319,4427	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:144,0:144:99:0,433,6013	0/0:140,0:140:99:0,421,5846	0/0:142,0:142:99:0,427,5930	0/0:152,0:152:99:0,458,6348	0/0:158,0:158:99:0,476,6598	0/0:141,0:141:99:0,424,5888	0/0:148,0:148:99:0,445,6181	0/0:145,0:145:99:0,436,6055	0/0:130,0:130:99:0,391,5429	0/0:137,0:137:99:0,412,5721	0/1:5,3:8:99:101,0,185	0/0:39,1:40:78.64:0,79,1587
gi|293339394|gb|GU595196.1|	67303	.	A	T	339.16	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.727;DP=2589;Dels=0.00;FS=1.850;HRun=0;HaplotypeScore=0.1500;InbreedingCoeff=0.9618;MQ=254.00;MQ0=0;MQRankSum=0.685;QD=33.92;ReadPosRankSum=-7.057;SB=-118.87	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	./.	0/0:121,8:129:54.21:0,54,4719	1/1:0,7:7:21.07:292,21,0	1/1:0,3:3:9.03:125,9,0	0/0:129,0:129:99:0,388,5387	0/0:149,1:150:99:0,410,6181	0/0:186,0:186:99:0,560,7767	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:155,0:155:99:0,467,6473	0/0:187,0:187:99:0,563,7809	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:143,0:143:99:0,430,5972	0/0:162,0:162:99:0,488,6765	0/0:158,0:158:99:0,476,6598	0/0:155,0:155:99:0,467,6473	0/0:19,0:19:57.19:0,57,793	0/0:6,0:6:18.06:0,18,251
gi|293339394|gb|GU595196.1|	67305	.	G	A,C	86.30	.	AC=1,4;AF=0.025,0.100;AN=40;BaseQRankSum=0.905;DP=2533;Dels=0.00;FS=0.000;HaplotypeScore=0.0000;InbreedingCoeff=0.8480;MQ=254.00;MQ0=0;MQRankSum=0.225;QD=10.79;ReadPosRankSum=-5.365;SB=-52.59	GT:AD:DP:GQ:PL	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	./.	0/0:118,0,5:123:99:0,355,4928,161,4734,4719	2/2:0,0,2:2:6.02:84,84,84,6,6,0	2/2:0,0,1:1:3.01:42,42,42,3,3,0	0/0:127,0,0:127:99:0,382,5304,382,5304,5304	0/0:143,0,0:143:99:0,430,5972,430,5972,5972	0/0:190,0,0:190:99:0,572,7934,572,7934,7934	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:162,0,0:162:99:0,488,6765,488,6765,6765	0/0:152,0,0:152:99:0,458,6348,458,6348,6348	0/0:181,0,0:181:99:0,545,7559,545,7559,7559	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	0/0:141,0,0:141:99:0,424,5888,424,5888,5888	0/0:160,0,0:160:99:0,482,6682,482,6682,6682	0/0:155,0,0:155:99:0,467,6473,467,6473,6473	0/0:152,0,0:152:99:0,458,6348,458,6348,6348	0/0:19,0,0:19:57.19:0,57,793,57,793,793	0/1:3,2,0:5:68.47:68,0,110,78,116,194
gi|293339394|gb|GU595196.1|	67342	.	C	A,G	20295.54	.	AC=28,4;AF=0.778,0.111;AN=36;BaseQRankSum=1.488;DP=818;Dels=0.00;FS=3.651;HaplotypeScore=0.8332;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.100;QD=41.76;ReadPosRankSum=-14.658;SB=-8952.69	GT:AD:DP:GQ:PL	1/1:0,32,0:32:96.32:1336,96,0,1336,96,1336	1/1:0,30,0:30:90.30:1253,90,0,1253,90,1253	./.	1/1:0,23,0:23:69.23:960,69,0,960,69,960	./.	./.	1/1:0,31,0:31:93.31:1295,93,0,1295,93,1295	1/1:0,34,0:34:99:1420,102,0,1420,102,1420	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	1/1:0,35,0:35:99:1462,105,0,1462,105,1462	1/1:0,30,0:30:90.30:1253,90,0,1253,90,1253	1/1:0,40,0:40:99:1670,120,0,1670,120,1670	1/1:0,43,0:43:99:1796,129,0,1796,129,1796	1/1:0,41,0:41:99:1712,123,0,1712,123,1712	1/1:0,34,0:34:99:1420,102,0,1420,102,1420	1/1:0,29,0:29:87.29:1211,87,0,1211,87,1211	1/1:0,41,0:41:99:1712,123,0,1712,123,1712	1/1:0,31,0:31:93.31:1295,93,0,1295,93,1295	2/2:0,0,10:10:30.10:418,418,418,30,30,0	2/2:0,0,2:2:6.02:84,84,84,6,6,0
gi|293339394|gb|GU595196.1|	67346	.	A	C	57.70	.	AC=2;AF=0.059;AN=34;BaseQRankSum=-0.598;DP=608;Dels=0.00;FS=14.010;HRun=1;HaplotypeScore=1.7645;InbreedingCoeff=-0.0658;MQ=254.00;MQ0=0;MQRankSum=-0.476;QD=1.25;ReadPosRankSum=-4.824;SB=-21.01	GT:AD:DP:GQ:PL	0/0:19,0:19:57.19:0,57,793	0/0:19,0:19:57.19:0,57,793	./.	0/0:8,0:8:24.08:0,24,334	./.	./.	0/0:22,1:23:27.47:0,27,877	0/0:19,0:19:57.19:0,57,793	0/0:164,0:164:99:0,494,6849	0/0:158,0:158:99:0,476,6598	0/0:20,1:21:21.45:0,21,793	0/1:16,3:19:68.09:68,0,611	0/0:28,0:28:84.28:0,84,1169	0/0:29,0:29:87.29:0,87,1211	0/1:24,3:27:44.01:44,0,921	0/0:18,1:19:15.43:0,15,710	0/0:20,0:20:60.20:0,60,835	0/0:19,0:19:57.19:0,57,793	0/0:12,0:12:36.12:0,36,501	0/0:4,0:4:12.04:0,12,167	./.
gi|293339394|gb|GU595196.1|	67348	.	G	A	536.51	.	AC=11;AF=0.306;AN=36;BaseQRankSum=0.462;DP=482;Dels=0.00;FS=35.615;HRun=2;HaplotypeScore=2.3886;InbreedingCoeff=-0.1805;MQ=254.00;MQ0=0;MQRankSum=-0.653;QD=4.22;ReadPosRankSum=-5.024;SB=-103.27	GT:AD:DP:GQ:PL	0/1:11,1:12:5.64:6,0,423	0/1:13,2:15:38.37:38,0,498	./.	0/0:4,0:4:12.04:0,12,167	0/0:1,0:1:3.01:0,3,42	./.	0/1:10,2:12:47.40:47,0,381	0/0:8,0:8:24.08:0,24,334	0/0:156,0:156:99:0,470,6515	0/0:149,0:149:99:0,448,6222	0/1:8,2:10:53.42:53,0,304	0/1:8,4:12:99:131,0,298	0/1:18,2:20:23.32:23,0,691	0/0:19,1:20:18.44:0,18,752	0/1:13,6:19:99:193,0,486	0/1:10,1:11:8.65:9,0,384	0/0:8,0:8:24.08:0,24,334	0/1:12,1:13:2.63:3,0,462	0/0:9,0:9:27.09:0,27,376	1/1:0,3:3:9.03:125,9,0	./.
gi|293339394|gb|GU595196.1|	67350	.	G	T	1998.54	.	AC=14;AF=0.389;AN=36;BaseQRankSum=0.222;DP=386;Dels=0.00;FS=4.152;HRun=1;HaplotypeScore=2.1108;InbreedingCoeff=-0.4622;MQ=254.00;MQ0=0;MQRankSum=-0.448;QD=23.24;ReadPosRankSum=-11.584;SB=-1023.07	GT:AD:DP:GQ:PL	0/1:1,2:3:32.73:74,0,33	0/1:3,4:7:99:146,0,104	./.	0/1:1,4:5:26.71:152,0,27	0/0:1,0:1:3.01:0,3,42	./.	0/1:3,5:8:99:185,0,101	0/0:6,0:6:18.06:0,18,251	0/0:150,0:150:99:0,452,6264	0/0:142,0:142:99:0,427,5930	0/1:3,1:4:29.72:30,0,113	0/1:5,3:8:99:101,0,185	0/1:2,8:10:53.42:304,0,53	0/1:2,11:13:44.39:420,0,44	0/1:6,5:11:99:176,0,217	0/1:1,1:2:35.74:36,0,36	1/1:0,5:5:15.05:209,15,0	0/1:2,3:5:68.47:110,0,68	0/1:1,4:5:26.71:152,0,27	./.	0/0:1,0:1:3.01:0,3,42
gi|293339394|gb|GU595196.1|	67351	.	T	G	71.68	.	AC=1;AF=0.028;AN=36;BaseQRankSum=0.073;DP=330;Dels=0.00;FS=2.403;HRun=3;HaplotypeScore=0.4999;InbreedingCoeff=-0.1127;MQ=254.00;MQ0=0;MQRankSum=-0.213;QD=17.92;ReadPosRankSum=-2.857;SB=-34.40	GT:AD:DP:GQ:PL	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:9.03:0,9,125	./.	0/0:2,0:2:6.02:0,6,84	0/0:1,0:1:3.01:0,3,42	0/0:1,0:1:3.01:0,3,42	0/0:4,0:4:12.04:0,12,167	0/1:1,3:4:29.72:113,0,30	0/0:146,0:146:99:0,439,6097	0/0:140,0:140:99:0,421,5846	0/0:3,0:3:9.03:0,9,125	0/0:6,0:6:18.06:0,18,251	0/0:2,0:2:6.02:0,6,84	0/0:3,0:3:9.03:0,9,125	0/0:6,0:6:18.06:0,18,251	0/0:3,0:3:9.03:0,9,125	./.	0/0:2,0:2:6.02:0,6,84	0/0:2,0:2:6.02:0,6,84	./.	0/0:1,0:1:3.01:0,3,42
gi|293339394|gb|GU595196.1|	67356	.	G	A	171.57	.	AC=6;AF=0.158;AN=38;BaseQRankSum=0.571;DP=321;Dels=0.00;FS=10.465;HRun=0;HaplotypeScore=0.3157;InbreedingCoeff=0.6389;MQ=254.00;MQ0=0;MQRankSum=-0.038;QD=28.60;ReadPosRankSum=-2.573;SB=0.01	GT:AD:DP:GQ:PL	0/0:4,0:4:12.04:0,12,167	0/0:8,0:8:24.08:0,24,334	./.	0/0:7,0:7:21.07:0,21,292	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:5,0:5:15.05:0,15,209	1/1:0,3:3:9.03:125,9,0	0/0:129,0:129:99:0,388,5387	0/0:124,0:124:99:0,373,5178	0/0:4,0:4:12.04:0,12,167	0/0:7,0:7:21.07:0,21,292	0/0:2,0:2:6.02:0,6,84	0/0:3,0:3:9.03:0,9,125	0/0:8,0:8:24.08:0,24,334	0/0:5,0:5:15.05:0,15,209	0/0:1,0:1:3.01:0,3,42	0/0:3,0:3:9.03:0,9,125	0/0:4,0:4:12.04:0,12,167	./.	0/0:1,0:1:3.01:0,3,42
gi|293339394|gb|GU595196.1|	67377	.	C	T	514.43	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.222;DP=303;Dels=0.00;FS=10.806;HRun=1;HaplotypeScore=0.2500;InbreedingCoeff=0.8977;MQ=254.00;MQ0=0;MQRankSum=-0.606;QD=34.30;ReadPosRankSum=2.659;SB=-0.02	GT:AD:DP:GQ:PL	0/0:12,0:12:36.12:0,36,501	0/0:17,0:17:51.17:0,51,710	./.	0/0:11,0:11:33.11:0,33,459	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	0/0:11,0:11:33.11:0,33,459	1/1:0,5:5:15.05:209,15,0	0/0:72,0:72:99:0,217,3007	0/0:69,0:69:99:0,208,2881	0/0:17,0:17:51.17:0,51,710	0/0:14,0:14:42.14:0,42,585	0/0:6,0:6:18.06:0,18,251	0/0:6,0:6:18.06:0,18,251	0/0:16,0:16:48.16:0,48,668	0/0:12,0:12:36.12:0,36,501	0/0:9,0:9:27.09:0,27,376	0/0:7,0:7:21.07:0,21,292	0/0:9,0:9:27.09:0,27,376	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0
gi|293339394|gb|GU595196.1|	67382	.	T	C	126.50	.	AC=5;AF=0.125;AN=40;BaseQRankSum=-0.043;DP=292;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.2500;InbreedingCoeff=0.6380;MQ=254.00;MQ0=0;MQRankSum=0.096;QD=21.08;ReadPosRankSum=0.214;SB=-0.02	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,585	0/0:18,0:18:54.18:0,54,752	./.	0/0:11,0:11:33.11:0,33,459	0/1:1,1:2:35.74:36,0,36	0/0:4,0:4:12.04:0,12,167	0/0:16,0:16:48.16:0,48,668	0/0:5,0:5:15.05:0,15,209	0/0:56,0:56:99:0,169,2339	0/0:54,0:54:99:0,163,2255	0/0:18,0:18:54.18:0,54,752	0/0:15,0:15:45.15:0,45,626	0/0:10,0:10:30.10:0,30,418	0/0:7,0:7:21.07:0,21,292	0/0:16,0:16:48.16:0,48,668	0/0:13,0:13:39.13:0,39,543	0/0:10,0:10:30.10:0,30,418	0/0:9,0:9:27.09:0,27,376	0/0:10,0:10:30.10:0,30,418	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0
gi|293339394|gb|GU595196.1|	67411	.	A	G	353.23	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.925;DP=494;Dels=0.00;FS=0.964;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.2411;MQ=254.00;MQ0=0;MQRankSum=-1.359;QD=4.36;ReadPosRankSum=-5.778;SB=-180.44	GT:AD:DP:GQ:PL	0/0:26,0:26:78.26:0,78,1086	0/0:39,0:39:99:0,117,1629	0/0:5,0:5:15.05:0,15,209	0/1:29,5:34:99:106,0,1109	0/1:12,2:14:41.38:41,0,459	0/0:21,1:22:24.46:0,24,835	0/0:13,0:13:39.13:0,39,543	1/1:0,5:5:15.05:209,15,0	0/0:34,0:34:99:0,102,1420	0/0:33,0:33:99:0,99,1378	0/0:30,0:30:90.30:0,90,1253	0/0:25,0:25:75.25:0,75,1044	0/0:25,0:25:75.25:0,75,1044	0/0:23,0:23:69.23:0,69,960	0/0:26,0:26:78.26:0,78,1086	0/0:33,0:33:99:0,99,1378	0/0:31,0:31:93.31:0,93,1295	0/0:29,0:29:87.29:0,87,1211	0/0:19,0:19:57.19:0,57,793	0/1:12,1:13:2.63:3,0,462	0/1:12,3:15:80.13:80,0,456
gi|293339394|gb|GU595196.1|	67427	.	G	A	9935.85	.	AC=9;AF=0.214;AN=42;BaseQRankSum=-0.845;DP=1548;Dels=0.00;FS=0.489;HRun=0;HaplotypeScore=0.1428;InbreedingCoeff=0.2928;MQ=254.00;MQ0=0;MQRankSum=-0.065;QD=18.61;ReadPosRankSum=-2.105;SB=-4945.14	GT:AD:DP:GQ:PL	0/0:68,0:68:99:0,205,2840	0/0:85,0:85:99:0,256,3550	1/1:0,23:23:69.23:960,69,0	0/1:83,68:151:99:2385,0,3012	0/1:35,17:52:99:553,0,1305	0/1:38,56:94:99:2056,0,1304	0/0:9,0:9:27.09:0,27,376	1/1:0,66:66:99:2756,199,0	0/0:74,0:74:99:0,223,3090	0/0:85,0:85:99:0,256,3550	0/0:76,0:76:99:0,229,3174	0/0:88,0:88:99:0,265,3675	0/0:61,0:61:99:0,184,2547	0/0:81,0:81:99:0,244,3383	0/0:82,0:82:99:0,247,3424	0/0:82,0:82:99:0,247,3424	0/0:82,0:82:99:0,247,3424	0/0:87,0:87:99:0,262,3633	0/0:54,0:54:99:0,163,2255	0/1:44,20:64:99:643,0,1645	0/1:64,20:84:99:582,0,2420
gi|293339394|gb|GU595196.1|	67431	.	C	G	66.54	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.703;DP=1821;Dels=0.00;FS=1.011;HRun=4;HaplotypeScore=1.4760;InbreedingCoeff=-0.0492;MQ=254.00;MQ0=0;MQRankSum=-0.524;QD=0.43;ReadPosRankSum=-5.767;SB=-50.50	GT:AD:DP:GQ:PL	0/0:79,0:79:99:0,238,3299	0/0:98,0:98:99:0,295,4093	0/0:25,0:25:75.25:0,75,1044	0/0:183,0:183:99:0,551,7642	0/1:61,5:66:10.14:10,0,2349	0/0:114,0:114:99:0,343,4761	0/0:4,0:4:12.04:0,12,167	0/1:80,9:89:99:108,0,3073	0/0:97,0:97:99:0,292,4051	0/0:97,0:97:99:0,292,4051	0/0:90,0:90:99:0,271,3758	0/0:96,0:96:99:0,289,4009	0/0:73,0:73:99:0,220,3049	0/0:89,0:89:99:0,268,3717	0/0:93,0:93:99:0,280,3884	0/0:92,0:92:99:0,277,3842	0/0:90,0:90:99:0,271,3758	0/0:98,0:98:99:0,295,4093	0/0:64,0:64:99:0,193,2673	0/0:78,0:78:99:0,235,3257	0/0:106,0:106:99:0,319,4427
gi|293339394|gb|GU595196.1|	67432	.	A	C	279.25	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.687;DP=1902;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=1.7617;InbreedingCoeff=-0.0515;MQ=254.00;MQ0=0;MQRankSum=-0.219;QD=1.68;ReadPosRankSum=-6.537;SB=-137.67	GT:AD:DP:GQ:PL	0/0:79,0:79:99:0,238,3299	0/0:99,0:99:99:0,298,4134	0/0:26,0:26:78.26:0,78,1086	0/0:201,0:201:99:0,605,8394	0/1:63,8:71:99:120,0,2417	0/0:120,0:120:99:0,361,5011	0/0:4,0:4:12.04:0,12,167	0/1:83,12:95:99:215,0,3180	0/0:99,0:99:99:0,298,4134	0/0:100,0:100:99:0,301,4176	0/0:92,0:92:99:0,277,3842	0/0:101,0:101:99:0,304,4218	0/0:76,0:76:99:0,229,3174	0/0:95,0:95:99:0,286,3967	0/0:95,0:95:99:0,286,3967	0/0:95,0:95:99:0,286,3967	0/0:92,0:92:99:0,277,3842	0/0:102,0:102:99:0,307,4260	0/0:65,0:65:99:0,196,2714	0/0:84,0:84:99:0,253,3508	0/0:111,0:111:99:0,334,4635
gi|293339394|gb|GU595196.1|	67471	.	G	A	562.49	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.444;DP=2339;DS;Dels=0.00;FS=22.385;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=-0.0504;MQ=254.00;MQ0=0;MQRankSum=0.573;QD=2.01;ReadPosRankSum=-3.085;SB=-70.26	GT:AD:DP:GQ:PL	0/0:114,0:114:99:0,343,4761	0/0:125,0:125:99:0,376,5220	0/0:32,0:32:96.32:0,96,1336	0/1:134,14:148:99:139,0,5150	0/0:114,0:114:99:0,343,4761	0/0:106,0:106:99:0,319,4427	0/0:6,0:6:18.06:0,18,251	0/0:184,0:184:99:0,554,7684	0/0:128,0:128:99:0,385,5345	0/0:115,0:115:99:0,346,4802	0/0:107,0:107:99:0,322,4468	0/0:112,0:112:99:0,337,4677	0/0:107,0:107:99:0,322,4468	0/0:111,0:111:99:0,334,4635	0/0:124,0:124:99:0,373,5178	0/0:135,0:135:99:0,406,5638	0/0:110,0:110:99:0,331,4594	0/0:111,0:111:99:0,334,4635	0/0:106,0:106:99:0,319,4427	0/0:112,0:112:99:0,337,4677	0/1:111,21:132:99:480,0,4238
gi|293339394|gb|GU595196.1|	67492	.	T	C	51.60	.	AC=1;AF=0.024;AN=42;BaseQRankSum=-0.311;DP=1140;DS;Dels=0.00;FS=1.967;HRun=0;HaplotypeScore=0.4285;InbreedingCoeff=-0.0244;MQ=254.00;MQ0=0;MQRankSum=-0.412;QD=2.15;ReadPosRankSum=-2.044;SB=-23.29	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,211,2923	0/0:72,0:72:99:0,217,3007	0/0:19,0:19:57.19:0,57,793	0/0:45,0:45:99:0,135,1879	0/0:37,0:37:99:0,111,1545	0/1:20,4:24:94.80:95,0,763	0/0:22,0:22:66.22:0,66,919	0/0:90,0:90:99:0,271,3758	0/0:80,0:80:99:0,241,3341	0/0:67,0:67:99:0,202,2798	0/0:57,0:57:99:0,172,2380	0/0:55,0:55:99:0,166,2297	0/0:63,0:63:99:0,190,2631	0/0:64,0:64:99:0,193,2673	0/0:63,0:63:99:0,190,2631	0/0:68,0:68:99:0,205,2840	0/0:58,0:58:99:0,175,2422	0/0:53,0:53:99:0,160,2213	0/0:59,0:59:99:0,178,2464	0/0:42,0:42:99:0,126,1754	0/0:32,0:32:96.32:0,96,1336
gi|293339394|gb|GU595196.1|	67493	.	A	G	231.47	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.180;DP=1084;DS;Dels=0.00;FS=6.595;HRun=0;HaplotypeScore=0.4285;InbreedingCoeff=-0.0500;MQ=254.00;MQ0=0;MQRankSum=-0.307;QD=4.06;ReadPosRankSum=-4.768;SB=-124.04	GT:AD:DP:GQ:PL	0/0:67,0:67:99:0,202,2798	0/0:66,0:66:99:0,199,2756	0/0:17,0:17:51.17:0,51,710	0/0:46,0:46:99:0,138,1921	0/1:28,6:34:99:148,0,1067	0/1:18,5:23:99:140,0,682	0/0:22,0:22:66.22:0,66,919	0/0:84,0:84:99:0,253,3508	0/0:79,0:79:99:0,238,3299	0/0:65,0:65:99:0,196,2714	0/0:55,0:55:99:0,166,2297	0/0:50,0:50:99:0,151,2088	0/0:59,0:59:99:0,178,2464	0/0:58,0:58:99:0,175,2422	0/0:58,0:58:99:0,175,2422	0/0:68,0:68:99:0,205,2840	0/0:55,0:55:99:0,166,2297	0/0:53,0:53:99:0,160,2213	0/0:59,0:59:99:0,178,2464	0/0:36,0:38:99:0,108,1503	0/0:27,0:28:81.27:0,81,1128
gi|293339394|gb|GU595196.1|	67569	.	G	A	5642.16	.	AC=13;AF=0.310;AN=42;BaseQRankSum=-1.556;DP=934;Dels=0.00;FS=20.100;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8848;MQ=254.00;MQ0=0;MQRankSum=0.271;QD=33.39;ReadPosRankSum=2.161;SB=-2088.01	GT:AD:DP:GQ:PL	0/0:65,0:65:99:0,196,2714	0/0:61,0:61:99:0,184,2547	1/1:0,5:5:15.05:209,15,0	0/1:30,24:54:99:840,0,1090	1/1:0,11:11:33.11:459,33,0	1/1:0,9:9:27.09:376,27,0	0/0:52,0:52:99:0,157,2172	1/1:0,40:40:99:1670,120,0	0/0:91,0:91:99:0,274,3800	0/0:53,0:53:99:0,160,2213	0/0:54,0:54:99:0,163,2255	0/0:29,0:29:87.29:0,87,1211	0/0:26,0:26:78.26:0,78,1086	0/0:22,0:22:66.22:0,66,919	0/0:58,0:58:99:0,175,2422	0/0:50,0:50:99:0,151,2088	0/0:56,0:56:99:0,169,2339	0/0:83,0:83:99:0,250,3466	0/0:65,0:65:99:0,196,2714	1/1:0,19:19:57.19:793,57,0	1/1:0,31:31:93.31:1295,93,0
gi|293339394|gb|GU595196.1|	67607	.	C	G	138.92	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.392;DP=1071;Dels=0.00;FS=1.595;HRun=1;HaplotypeScore=0.2381;InbreedingCoeff=0.8222;MQ=254.00;MQ0=0;MQRankSum=0.718;QD=27.78;ReadPosRankSum=-4.045;SB=-97.86	GT:AD:DP:GQ:PL	0/0:75,0:75:99:0,226,3132	0/0:85,0:85:99:0,256,3550	0/0:1,0:1:3.01:0,3,42	0/0:31,1:32:54.56:0,55,1253	1/1:0,3:3:9.03:125,9,0	0/0:11,0:11:33.11:0,33,459	0/0:57,0:57:99:0,172,2380	1/1:0,2:2:6.02:84,6,0	0/0:94,0:94:99:0,283,3925	0/0:31,0:31:93.31:0,93,1295	0/0:92,0:92:99:0,277,3842	0/0:24,0:24:72.24:0,72,1002	0/0:15,0:15:45.15:0,45,626	0/0:34,0:34:99:0,102,1420	0/0:94,0:94:99:0,283,3925	0/0:90,0:90:99:0,271,3758	0/0:84,0:84:99:0,253,3508	0/0:107,0:107:99:0,322,4468	0/0:86,0:86:99:0,259,3591	0/0:9,0:9:27.09:0,27,376	0/0:45,0:45:99:0,135,1879
gi|293339394|gb|GU595196.1|	67616	.	A	T	338.51	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.255;DP=1186;Dels=0.00;FS=4.783;HRun=2;HaplotypeScore=1.1427;InbreedingCoeff=0.9579;MQ=254.00;MQ0=0;MQRankSum=-0.484;QD=33.85;ReadPosRankSum=-5.089;SB=-160.65	GT:AD:DP:GQ:PL	0/0:86,0:86:99:0,259,3591	0/0:85,0:85:99:0,256,3550	0/0:5,0:5:15.05:0,15,209	0/0:53,0:53:99:0,160,2213	1/1:0,3:3:9.03:125,9,0	0/0:19,0:19:57.19:0,57,793	0/0:56,0:56:99:0,169,2339	1/1:0,7:7:21.07:292,21,0	0/0:108,0:108:99:0,325,4510	0/0:28,0:28:84.28:0,84,1169	0/0:95,0:95:99:0,286,3967	0/0:25,0:25:75.25:0,75,1044	0/0:16,0:16:48.16:0,48,668	0/0:33,0:33:99:0,99,1378	0/0:109,0:109:99:0,328,4552	0/0:91,0:91:99:0,274,3800	0/0:91,0:91:99:0,274,3800	0/0:113,0:113:99:0,340,4719	0/0:91,0:91:99:0,274,3800	0/0:25,0:25:75.25:0,75,1044	0/0:47,0:47:99:0,141,1963
gi|293339394|gb|GU595196.1|	67617	.	G	A	502.50	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.629;DP=1209;Dels=0.00;FS=5.650;HRun=1;HaplotypeScore=1.1427;InbreedingCoeff=0.9811;MQ=254.00;MQ0=0;MQRankSum=-0.037;QD=35.89;ReadPosRankSum=-5.525;SB=-245.68	GT:AD:DP:GQ:PL	0/0:89,0:89:99:0,268,3717	0/0:84,0:84:99:0,253,3508	0/0:7,0:7:21.07:0,21,292	0/0:55,0:55:99:0,166,2297	1/1:0,4:4:12.04:167,12,0	0/0:19,0:19:57.19:0,57,793	0/0:56,0:56:99:0,169,2339	1/1:0,10:10:30.10:418,30,0	0/0:112,0:112:99:0,337,4677	0/0:29,0:29:87.29:0,87,1211	0/0:95,0:95:99:0,286,3967	0/0:26,0:26:78.26:0,78,1086	0/0:16,0:16:48.16:0,48,668	0/0:32,0:32:96.32:0,96,1336	0/0:113,0:113:99:0,340,4719	0/0:93,0:93:99:0,280,3884	0/0:91,0:91:99:0,274,3800	0/0:115,0:115:99:0,346,4802	0/0:91,0:91:99:0,274,3800	0/0:26,0:26:78.26:0,78,1086	0/0:46,0:46:99:0,138,1921
gi|293339394|gb|GU595196.1|	67618	.	G	A	4296.80	.	AC=9;AF=0.214;AN=42;BaseQRankSum=0.899;DP=1213;Dels=0.00;FS=198.445;HRun=0;HaplotypeScore=1.1427;InbreedingCoeff=0.8498;MQ=254.00;MQ0=0;MQRankSum=-0.984;QD=27.72;ReadPosRankSum=-2.815;SB=-793.17	GT:AD:DP:GQ:PL	0/0:89,0:89:99:0,268,3717	0/0:84,0:84:99:0,253,3508	1/1:0,7:7:21.07:292,21,0	0/1:48,9:57:99:204,0,1833	0/0:4,0:4:12.04:0,12,167	1/1:0,19:19:57.19:793,57,0	0/0:57,0:57:99:0,172,2380	0/0:13,0:13:39.13:0,39,543	0/0:111,0:111:99:0,334,4635	0/0:29,0:29:87.29:0,87,1211	0/0:94,0:94:99:0,283,3925	0/0:27,0:27:81.27:0,81,1128	0/0:16,0:16:48.16:0,48,668	0/0:31,0:31:93.31:0,93,1295	0/0:114,0:114:99:0,343,4761	0/0:90,0:90:99:0,271,3758	0/0:92,0:92:99:0,277,3842	0/0:117,0:117:99:0,352,4886	0/0:90,0:90:99:0,271,3758	1/1:0,26:26:78.26:1086,78,0	1/1:0,46:46:99:1921,138,0
gi|293339394|gb|GU595196.1|	67654	.	C	T	298.01	.	AC=1;AF=0.024;AN=42;BaseQRankSum=-0.239;DP=1620;Dels=0.00;FS=5.799;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=-0.0244;MQ=254.00;MQ0=0;MQRankSum=1.297;QD=4.45;ReadPosRankSum=1.270;SB=-158.96	GT:AD:DP:GQ:PL	0/0:115,0:115:99:0,346,4802	0/0:108,0:108:99:0,325,4510	0/0:19,0:19:57.19:0,57,793	0/0:99,0:99:99:0,298,4134	0/0:33,0:33:99:0,99,1378	0/0:49,0:49:99:0,147,2046	0/0:72,0:72:99:0,217,3007	0/0:101,0:101:99:0,304,4218	0/0:126,0:126:99:0,379,5262	0/0:29,0:29:87.29:0,87,1211	0/0:128,0:128:99:0,385,5345	0/0:31,0:31:93.31:0,93,1295	0/0:33,0:33:99:0,99,1378	0/0:22,0:22:66.22:0,66,919	0/0:124,0:124:99:0,373,5178	0/0:89,0:89:99:0,268,3717	0/0:115,0:115:99:0,346,4802	0/0:121,0:121:99:0,364,5053	0/0:100,0:100:99:0,301,4176	0/1:54,13:67:99:341,0,2053	0/0:39,0:39:99:0,117,1629
gi|293339394|gb|GU595196.1|	67680	.	T	C	10152.60	.	AC=9;AF=0.214;AN=42;BaseQRankSum=1.020;DP=1561;Dels=0.00;FS=324.669;HRun=0;HaplotypeScore=0.0476;InbreedingCoeff=0.2929;MQ=254.00;MQ0=0;MQRankSum=-0.514;QD=25.38;ReadPosRankSum=-2.305;SB=-2789.82	GT:AD:DP:GQ:PL	0/0:101,0:101:99:0,304,4218	0/0:114,0:114:99:0,343,4761	1/1:0,20:20:60.20:835,60,0	0/1:46,29:75:99:985,0,1695	0/1:10,38:48:99:1442,0,273	0/1:11,35:46:99:1323,0,321	0/0:82,0:82:99:0,247,3424	1/1:0,118:118:99:4928,355,0	0/0:109,0:109:99:0,328,4552	0/0:17,0:17:51.17:0,51,710	0/0:130,0:130:99:0,391,5429	0/0:29,0:29:87.29:0,87,1211	0/0:27,0:27:81.27:0,81,1128	0/0:17,0:17:51.17:0,51,710	0/0:123,0:123:99:0,370,5137	0/0:108,0:108:99:0,325,4510	0/0:107,0:107:99:0,322,4468	0/0:97,0:97:99:0,292,4051	0/0:100,0:100:99:0,301,4176	0/1:38,7:45:99:157,0,1451	0/1:33,15:48:99:482,0,1234
gi|293339394|gb|GU595196.1|	67712	.	A	T	2273.86	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.148;DP=1447;Dels=0.00;FS=338.403;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=-0.1053;MQ=254.00;MQ0=0;MQRankSum=0.616;QD=11.91;ReadPosRankSum=-1.542;SB=-40.88	GT:AD:DP:GQ:PL	0/0:92,0:92:99:0,277,3842	0/0:98,0:98:99:0,295,4093	0/0:19,0:19:57.19:0,57,793	0/1:59,19:78:99:559,0,2229	0/1:25,18:43:99:622,0,915	0/1:21,14:35:99:479,0,772	0/0:87,0:87:99:0,262,3633	0/0:119,0:119:99:0,358,4969	0/0:94,0:94:99:0,283,3925	0/0:10,0:10:30.10:0,30,418	0/0:97,0:97:99:0,292,4051	0/0:22,0:22:66.22:0,66,919	0/0:18,0:18:54.18:0,54,752	0/0:14,0:14:42.14:0,42,585	0/0:114,0:114:99:0,343,4761	0/0:114,0:114:99:0,343,4761	0/0:126,0:126:99:0,379,5262	0/0:101,0:101:99:0,304,4218	0/0:103,0:103:99:0,310,4301	0/0:28,0:28:84.28:0,84,1169	0/1:16,19:35:99:688,0,563
gi|293339394|gb|GU595196.1|	67743	.	C	T	191.97	.	AC=1;AF=0.024;AN=42;BaseQRankSum=-0.433;DP=1107;Dels=0.00;FS=53.178;HRun=0;HaplotypeScore=0.9046;InbreedingCoeff=-0.0289;MQ=254.00;MQ0=0;MQRankSum=0.111;QD=10.10;ReadPosRankSum=1.259;SB=0.24	GT:AD:DP:GQ:PL	0/0:75,0:75:99:0,226,3132	0/0:82,0:82:99:0,247,3424	0/0:5,0:5:15.05:0,15,209	0/0:24,0:24:72.24:0,72,1002	0/0:20,0:20:60.20:0,60,835	0/0:15,0:15:45.15:0,45,626	0/0:92,0:92:99:0,277,3842	0/0:89,0:89:99:0,268,3717	0/0:102,0:102:99:0,307,4260	0/0:4,0:4:12.04:0,12,167	0/0:75,0:75:99:0,226,3132	0/0:11,0:11:33.11:0,33,459	0/0:5,0:5:15.05:0,15,209	0/0:4,0:4:12.04:0,12,167	0/0:95,0:95:99:0,286,3967	0/0:99,0:99:99:0,298,4134	0/0:98,0:98:99:0,295,4093	0/0:89,0:89:99:0,268,3717	0/0:92,0:92:99:0,277,3842	0/0:12,0:12:36.12:0,36,501	0/1:12,7:19:99:235,0,444
gi|293339394|gb|GU595196.1|	67745	.	C	A	213.04	.	AC=1;AF=0.024;AN=42;BaseQRankSum=0.453;DP=1092;Dels=0.00;FS=54.725;HRun=3;HaplotypeScore=0.9999;InbreedingCoeff=-0.0289;MQ=254.00;MQ0=0;MQRankSum=0.418;QD=17.75;ReadPosRankSum=-1.071;SB=0.25	GT:AD:DP:GQ:PL	0/0:73,0:73:99:0,220,3049	0/0:80,0:80:99:0,241,3341	0/0:5,0:5:15.05:0,15,209	0/0:19,0:19:57.19:0,57,793	0/0:19,0:19:57.19:0,57,793	0/0:14,0:14:42.14:0,42,585	0/0:94,0:94:99:0,283,3925	0/0:91,0:91:99:0,274,3800	0/0:101,0:101:99:0,304,4218	0/0:4,0:4:12.04:0,12,167	0/0:79,0:79:99:0,238,3299	0/0:11,0:11:33.11:0,33,459	0/0:5,0:5:15.05:0,15,209	0/0:4,0:4:12.04:0,12,167	0/0:94,0:94:99:0,283,3925	0/0:96,0:96:99:0,289,4009	0/0:98,0:98:99:0,295,4093	0/0:83,0:83:99:0,250,3466	0/0:91,0:91:99:0,274,3800	0/1:5,7:12:99:256,0,173	0/0:19,0:19:57.19:0,57,793
gi|293339394|gb|GU595196.1|	67748	.	A	C	254.86	.	AC=1;AF=0.024;AN=42;BaseQRankSum=1.158;DP=1067;Dels=0.00;FS=65.704;HRun=0;HaplotypeScore=1.2379;InbreedingCoeff=-0.0347;MQ=254.00;MQ0=0;MQRankSum=0.059;QD=21.24;ReadPosRankSum=-1.941;SB=0.41	GT:AD:DP:GQ:PL	0/0:78,0:78:99:0,235,3257	0/0:81,0:81:99:0,244,3383	0/0:4,0:4:12.04:0,12,167	0/0:18,0:18:54.18:0,54,752	0/0:20,0:20:60.20:0,60,835	0/0:12,0:12:36.12:0,36,501	0/0:94,0:94:99:0,283,3925	0/0:92,0:92:99:0,277,3842	0/0:99,0:99:99:0,298,4134	0/0:3,0:3:9.03:0,9,125	0/0:80,0:80:99:0,241,3341	0/0:7,0:7:21.07:0,21,292	0/0:5,0:5:15.05:0,15,209	0/0:2,0:2:6.02:0,6,84	0/0:83,0:83:99:0,250,3466	0/0:93,0:93:99:0,280,3884	0/0:95,0:95:99:0,286,3967	0/0:84,0:84:99:0,253,3508	0/0:88,0:88:99:0,265,3675	0/1:4,8:12:99:298,0,131	0/0:17,0:17:51.17:0,51,710
gi|293339394|gb|GU595196.1|	67751	.	C	T	277.32	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.808;DP=1059;Dels=0.00;FS=83.985;HRun=1;HaplotypeScore=1.4284;InbreedingCoeff=-0.0660;MQ=254.00;MQ0=0;MQRankSum=-0.552;QD=9.90;ReadPosRankSum=-0.496;SB=0.68	GT:AD:DP:GQ:PL	0/0:76,0:76:99:0,229,3174	0/0:85,0:85:99:0,256,3550	0/0:4,0:4:12.04:0,12,167	0/0:14,0:14:42.14:0,42,585	0/1:11,7:18:99:238,0,405	0/1:7,3:10:95.18:95,0,262	0/0:91,0:91:99:0,274,3800	0/0:90,0:90:99:0,271,3758	0/0:97,0:97:99:0,292,4051	0/0:2,0:2:6.02:0,6,84	0/0:86,0:86:99:0,259,3591	0/0:5,0:5:15.05:0,15,209	0/0:3,0:3:9.03:0,9,125	0/0:2,0:2:6.02:0,6,84	0/0:84,0:84:99:0,253,3508	0/0:96,0:96:99:0,289,4009	0/0:93,0:93:99:0,280,3884	0/0:83,0:83:99:0,250,3466	0/0:89,0:89:99:0,268,3717	0/0:10,0:10:30.10:0,30,418	0/0:21,0:21:63.21:0,63,877
gi|293339394|gb|GU595196.1|	67758	.	G	T	701.87	.	AC=1;AF=0.024;AN=42;BaseQRankSum=-0.977;DP=1152;Dels=0.00;FS=137.568;HRun=0;HaplotypeScore=0.5237;InbreedingCoeff=-0.0412;MQ=254.00;MQ0=0;MQRankSum=-0.057;QD=23.40;ReadPosRankSum=-2.945;SB=-0.02	GT:AD:DP:GQ:PL	0/0:86,0:86:99:0,259,3591	0/0:93,0:93:99:0,280,3884	0/0:3,0:3:9.03:0,9,125	0/0:15,0:15:45.15:0,45,626	0/0:10,0:10:30.10:0,30,418	0/0:7,0:7:21.07:0,21,292	0/0:102,0:102:99:0,307,4260	0/0:86,0:86:99:0,259,3591	0/0:109,0:109:99:0,328,4552	0/0:2,0:2:6.02:0,6,84	0/0:108,0:108:99:0,325,4510	0/0:5,0:5:15.05:0,15,209	0/0:3,0:3:9.03:0,9,125	0/0:2,0:2:6.02:0,6,84	0/0:100,0:100:99:0,301,4176	0/0:109,0:109:99:0,328,4552	0/0:86,0:86:99:0,259,3591	0/0:94,0:94:99:0,283,3925	0/0:93,0:93:99:0,280,3884	0/0:9,0:9:27.09:0,27,376	0/1:10,20:30:99:745,0,327
gi|293339394|gb|GU595196.1|	67805	.	A	G	3466.13	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.359;DP=2076;Dels=0.00;FS=289.412;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9068;MQ=254.00;MQ0=0;MQRankSum=-2.050;QD=41.76;ReadPosRankSum=0.751;SB=9.20	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:160,0:160:99:0,482,6682	./.	1/1:0,30:30:90.30:1253,90,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	0/0:167,0:167:99:0,503,6974	0/0:110,0:110:99:0,331,4594	0/0:175,0:175:99:0,527,7308	0/0:43,0:43:99:0,129,1796	0/0:179,0:179:99:0,539,7475	0/0:30,0:30:90.30:0,90,1253	0/0:40,0:40:99:0,120,1670	0/0:27,0:27:81.27:0,81,1128	0/0:181,0:181:99:0,545,7559	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:189,0:189:99:0,569,7893	0/0:183,0:183:99:0,551,7642	1/1:0,12:12:36.12:501,36,0	1/1:0,39:39:99:1629,117,0
gi|293339394|gb|GU595196.1|	67822	.	T	C	1108.05	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-0.281;DP=2175;Dels=0.00;FS=103.779;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9110;MQ=254.00;MQ0=0;MQRankSum=0.035;QD=38.21;ReadPosRankSum=-6.416;SB=7.28	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	./.	1/1:0,12:12:36.12:501,36,0	./.	1/1:0,1:1:3.01:42,3,0	0/0:155,0:155:99:0,467,6473	0/0:147,0:147:99:0,442,6139	0/0:185,0:185:99:0,557,7726	0/0:74,0:74:99:0,223,3090	0/0:179,0:179:99:0,539,7475	0/0:53,0:53:99:0,160,2213	0/0:63,0:63:99:0,190,2631	0/0:56,0:56:99:0,169,2339	0/0:185,0:185:99:0,557,7726	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	0/0:194,0:194:99:0,584,8102	0/0:182,0:182:99:0,548,7600	1/1:0,2:2:6.02:84,6,0	1/1:0,14:14:42.14:585,42,0
gi|293339394|gb|GU595196.1|	72621	.	C	A	62.59	.	AC=4;AF=0.118;AN=34;BaseQRankSum=1.362;DP=2570;Dels=0.00;FS=9.323;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8287;MQ=254.00;MQ0=0;MQRankSum=-0.070;QD=20.86;ReadPosRankSum=-2.713;SB=-0.02	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:176,0:176:99:0,530,7350	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:196,0:196:99:0,590,8185	0/0:169,0:169:99:0,509,7057	0/0:143,0:143:99:0,430,5972	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:193,0:193:99:0,581,8060	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	./.	./.
gi|293339394|gb|GU595196.1|	72669	.	T	C	850.34	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-0.361;DP=2555;Dels=0.00;FS=66.263;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9711;MQ=254.00;MQ0=0;MQRankSum=0.198;QD=36.97;ReadPosRankSum=-2.789;SB=-0.02	GT:AD:DP:GQ:PL	0/0:145,0:145:99:0,436,6055	0/0:166,0:166:99:0,500,6932	./.	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:12.04:167,12,0	1/1:0,9:9:27.09:376,27,0	0/0:191,0:191:99:0,575,7976	0/0:161,0:161:99:0,485,6723	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	0/0:173,0:173:99:0,521,7225	0/0:160,0:160:99:0,482,6682	0/0:172,0:172:99:0,518,7183	0/0:189,0:189:99:0,569,7893	0/0:182,0:182:99:0,548,7600	0/0:156,0:156:99:0,470,6515	0/0:153,0:153:99:0,461,6389	0/0:181,0:181:99:0,545,7559	./.	1/1:0,7:7:21.07:292,21,0
gi|293339394|gb|GU595196.1|	72681	.	C	A	1015.55	.	AC=8;AF=0.211;AN=38;BaseQRankSum=0.065;DP=2558;Dels=0.00;FS=78.068;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9796;MQ=254.00;MQ0=0;MQRankSum=-0.262;QD=37.61;ReadPosRankSum=-4.399;SB=-0.02	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:159,0:159:99:0,479,6640	./.	1/1:0,7:7:21.07:292,21,0	1/1:0,7:7:21.07:292,21,0	1/1:0,3:3:9.03:125,9,0	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	0/0:149,0:149:99:0,448,6222	0/0:182,0:182:99:0,548,7600	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:184,0:184:99:0,554,7684	0/0:184,0:184:99:0,554,7684	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	./.	1/1:0,10:10:30.10:418,30,0
gi|293339394|gb|GU595196.1|	72686	.	T	G	1680.51	.	AC=8;AF=0.211;AN=38;BaseQRankSum=2.184;DP=2554;Dels=0.00;FS=127.587;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9969;MQ=254.00;MQ0=0;MQRankSum=-0.331;QD=39.08;ReadPosRankSum=-4.145;SB=-0.02	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:157,0:157:99:0,473,6556	./.	1/1:0,16:16:48.16:668,48,0	1/1:0,8:8:24.08:334,24,0	1/1:0,6:6:18.06:251,18,0	0/0:182,0:182:99:0,548,7600	0/0:166,0:166:99:0,500,6932	0/0:161,0:161:99:0,485,6723	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:177,0:177:99:0,533,7392	0/0:187,0:187:99:0,563,7809	0/0:182,0:182:99:0,548,7600	0/0:152,0:152:99:0,458,6348	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	./.	1/1:0,13:13:39.13:543,39,0
gi|293339394|gb|GU595196.1|	72702	.	T	A	152.25	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.610;DP=2691;Dels=0.00;FS=11.981;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9836;MQ=254.00;MQ0=0;MQRankSum=-0.367;QD=30.45;ReadPosRankSum=-1.999;SB=-0.02	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:164,0:164:99:0,494,6849	./.	0/0:35,0:35:99:0,105,1462	0/0:12,0:12:36.12:0,36,501	0/0:13,0:13:39.13:0,39,543	0/0:195,0:195:99:0,587,8143	0/0:174,0:174:99:0,524,7266	0/0:176,0:176:99:0,530,7350	0/0:181,0:181:99:0,545,7559	0/0:164,0:164:99:0,494,6849	0/0:185,0:185:99:0,557,7726	0/0:175,0:175:99:0,527,7308	0/0:157,0:157:99:0,473,6556	0/0:176,0:176:99:0,530,7350	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:182,0:182:99:0,548,7600	0/0:156,0:156:99:0,470,6515	1/1:0,5:5:15.05:209,15,0	0/0:24,0:24:72.24:0,72,1002
gi|293339394|gb|GU595196.1|	72749	.	C	T	1566.74	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-2.139;DP=2924;Dels=0.00;FS=106.342;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.338;QD=40.17;ReadPosRankSum=0.124;SB=-0.02	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	./.	0/0:72,0:72:99:0,217,3007	0/0:39,0:39:99:0,117,1629	0/0:45,0:45:99:0,135,1879	0/0:203,0:203:99:0,611,8477	0/0:185,0:185:99:0,557,7726	0/0:177,0:177:99:0,533,7392	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	0/0:191,0:191:99:0,575,7976	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:205,0:205:99:0,617,8561	1/1:0,39:39:99:1629,117,0	0/0:58,0:58:99:0,175,2422
gi|293339394|gb|GU595196.1|	72760	.	A	C	4510.13	.	AC=4;AF=0.100;AN=40;BaseQRankSum=0.138;DP=2900;Dels=0.00;FS=226.539;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.329;QD=41.76;ReadPosRankSum=-1.056;SB=-167.06	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:172,0:172:99:0,518,7183	./.	0/0:79,0:79:99:0,238,3299	1/1:0,46:46:99:1921,138,0	1/1:0,62:62:99:2589,187,0	0/0:193,0:193:99:0,581,8060	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:150,0:150:99:0,452,6264	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	0/0:179,0:179:99:0,539,7475	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:158,0:158:99:0,476,6598	0/0:167,0:167:99:0,503,6974	0/0:190,0:190:99:0,572,7934	0/0:36,0:36:99:0,108,1503	0/0:82,0:82:99:0,247,3424
gi|293339394|gb|GU595196.1|	72781	.	T	C	773.29	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.112;DP=2894;Dels=0.00;FS=50.674;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.044;QD=38.66;ReadPosRankSum=0.142;SB=-0.02	GT:AD:DP:GQ:PL	0/0:190,0:190:99:0,572,7934	0/0:169,0:169:99:0,509,7057	./.	0/0:81,0:81:99:0,244,3383	0/0:60,0:60:99:0,181,2506	0/0:70,0:70:99:0,211,2923	0/0:187,0:187:99:0,563,7809	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	0/0:157,0:157:99:0,473,6556	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:180,0:180:99:0,542,7517	0/0:184,0:184:99:0,554,7684	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	1/1:0,20:20:60.20:835,60,0	0/0:86,0:86:99:0,259,3591
gi|293339394|gb|GU595196.1|	72803	.	G	C	8727.93	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-0.047;DP=2769;Dels=0.00;FS=406.027;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9851;MQ=254.00;MQ0=0;MQRankSum=1.304;QD=41.76;ReadPosRankSum=2.954;SB=-501.14	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:173,0:173:99:0,521,7225	./.	1/1:0,54:54:99:2255,163,0	1/1:0,41:41:99:1712,123,0	1/1:0,54:54:99:2255,163,0	0/0:184,0:184:99:0,554,7684	0/0:160,0:160:99:0,482,6682	0/0:180,0:180:99:0,542,7517	0/0:146,0:146:99:0,439,6097	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	1/1:0,3:3:9.03:125,9,0	1/1:0,57:57:99:2380,172,0
gi|293339394|gb|GU595196.1|	72812	.	T	C	73.68	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.177;DP=2668;Dels=0.00;FS=5.991;HRun=0;HaplotypeScore=0.1500;InbreedingCoeff=0.9382;MQ=254.00;MQ0=0;MQRankSum=0.883;QD=24.56;ReadPosRankSum=-2.841;SB=-0.02	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:174,0:174:99:0,524,7266	./.	0/0:43,0:43:99:0,129,1796	0/0:30,0:30:90.30:0,90,1253	0/0:35,0:35:99:0,105,1462	0/0:179,0:179:99:0,539,7475	0/0:165,0:165:99:0,497,6890	0/0:185,0:185:99:0,557,7726	0/0:147,0:147:99:0,442,6139	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:152,0:152:99:0,458,6348	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:181,0:181:99:0,545,7559	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	1/1:0,3:3:9.03:125,9,0	0/0:31,0:31:93.31:0,93,1295
gi|293339394|gb|GU595196.1|	72818	.	C	T	4927.74	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-0.849;DP=2647;Dels=0.00;FS=224.636;HRun=1;HaplotypeScore=0.1500;InbreedingCoeff=0.9990;MQ=254.00;MQ0=0;MQRankSum=2.116;QD=41.76;ReadPosRankSum=-4.422;SB=-334.10	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	./.	1/1:0,37:37:99:1545,111,0	1/1:0,23:23:69.23:960,69,0	1/1:0,29:29:87.29:1211,87,0	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:192,0:192:99:0,578,8018	0/0:167,0:167:99:0,503,6974	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:146,0:146:99:0,439,6097	0/0:162,0:162:99:0,488,6765	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	0/0:156,0:156:99:0,470,6515	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	1/1:0,7:7:21.07:292,21,0	1/1:0,22:22:66.22:919,66,0
gi|293339394|gb|GU595196.1|	72872	.	G	T	193.56	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.253;DP=2541;Dels=0.00;FS=18.201;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9917;MQ=254.00;MQ0=0;MQRankSum=1.792;QD=32.26;ReadPosRankSum=-1.352;SB=-0.02	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:168,0:168:99:0,506,7016	./.	./.	./.	./.	0/0:208,0:208:99:0,626,8686	0/0:155,0:155:99:0,467,6473	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	0/0:141,0:141:99:0,424,5888	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	1/1:0,6:6:18.06:251,18,0	./.
gi|293339394|gb|GU595196.1|	72881	.	T	C	74.76	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.332;DP=2522;Dels=0.00;FS=6.026;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9375;MQ=254.00;MQ0=0;MQRankSum=-0.811;QD=24.92;ReadPosRankSum=-2.323;SB=-0.02	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	./.	./.	./.	./.	0/0:196,0:196:99:0,590,8185	0/0:159,0:159:99:0,479,6640	0/0:154,0:154:99:0,464,6431	0/0:170,0:170:99:0,512,7099	0/0:178,0:178:99:0,536,7433	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:179,0:179:99:0,539,7475	0/0:130,0:130:99:0,391,5429	0/0:179,0:179:99:0,539,7475	0/0:164,0:164:99:0,494,6849	1/1:0,3:3:9.03:125,9,0	./.
gi|293339394|gb|GU595196.1|	72898	.	A	C	242.45	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-0.497;DP=2508;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8392;MQ=254.00;MQ0=0;MQRankSum=0.266;QD=30.31;ReadPosRankSum=-4.334;SB=-140.66	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:172,0:172:99:0,518,7183	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:147,0:147:99:0,442,6139	0/0:169,0:169:99:0,509,7057	0/0:184,0:184:99:0,554,7684	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:185,0:185:99:0,557,7726	0/0:163,0:163:99:0,491,6807	0/0:179,0:179:99:0,539,7475	0/0:125,0:125:99:0,376,5220	0/0:173,0:173:99:0,521,7225	0/0:176,0:176:99:0,530,7350	./.	1/1:0,4:4:12.04:167,12,0
gi|293339394|gb|GU595196.1|	72904	.	A	G	2919.37	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-0.255;DP=2602;Dels=0.00;FS=0.430;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9994;MQ=254.00;MQ0=0;MQRankSum=0.612;QD=39.99;ReadPosRankSum=-10.681;SB=-1453.91	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:167,0:167:99:0,503,6974	./.	1/1:0,13:13:39.13:543,39,0	1/1:0,12:12:36.12:501,36,0	1/1:0,13:13:39.13:543,39,0	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	0/0:152,0:152:99:0,458,6348	0/0:180,0:180:99:0,542,7517	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	0/0:181,0:181:99:0,545,7559	0/0:126,0:126:99:0,379,5262	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	1/1:0,8:8:24.08:334,24,0	1/1:0,27:27:81.27:1128,81,0
gi|293339394|gb|GU595196.1|	72947	.	T	C	21673.63	.	AC=10;AF=0.250;AN=40;BaseQRankSum=1.088;DP=3167;Dels=0.00;FS=8.635;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.711;QD=41.76;ReadPosRankSum=2.025;SB=-10106.02	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	./.	1/1:0,130:130:99:5429,391,0	1/1:0,84:84:99:3508,253,0	1/1:0,95:95:99:3967,286,0	0/0:197,0:197:99:0,593,8227	0/0:182,0:182:99:0,548,7600	0/0:161,0:161:99:0,485,6723	0/0:193,0:193:99:0,581,8060	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:194,0:194:99:0,584,8102	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	0/0:171,0:171:99:0,515,7141	0/0:182,0:182:99:0,548,7600	0/0:167,0:167:99:0,503,6974	1/1:0,58:58:99:2422,175,0	1/1:0,152:152:99:6348,458,0
gi|293339394|gb|GU595196.1|	72983	.	G	T	13112.76	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.082;DP=3085;Dels=0.00;FS=1.158;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.735;QD=41.76;ReadPosRankSum=0.524;SB=-6347.59	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:171,0:171:99:0,515,7141	./.	1/1:0,134:134:99:5596,403,0	0/0:88,0:88:99:0,265,3675	0/0:95,0:95:99:0,286,3967	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:186,0:186:99:0,560,7767	0/0:150,0:150:99:0,452,6264	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:203,0:203:99:0,611,8477	1/1:0,56:56:99:2339,169,0	1/1:0,124:124:99:5178,373,0
gi|293339394|gb|GU595196.1|	73013	.	G	A	3028.35	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.083;DP=3060;Dels=0.00;FS=36.751;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.411;QD=40.92;ReadPosRankSum=1.468;SB=-793.47	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	./.	0/0:115,0:115:99:0,346,4802	0/0:76,0:76:99:0,229,3174	0/0:93,0:93:99:0,280,3884	0/0:193,0:193:99:0,581,8060	0/0:150,0:150:99:0,452,6264	0/0:183,0:183:99:0,551,7642	0/0:173,0:173:99:0,521,7225	0/0:203,0:203:99:0,611,8477	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:156,0:156:99:0,470,6515	0/0:177,0:177:99:0,533,7392	1/1:0,74:74:99:3090,223,0	0/0:107,0:107:99:0,322,4468
gi|293339394|gb|GU595196.1|	73048	.	G	A	14824.94	.	AC=8;AF=0.200;AN=40;BaseQRankSum=2.357;DP=2939;Dels=0.00;FS=167.187;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.855;QD=41.76;ReadPosRankSum=1.570;SB=-3883.73	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:169,0:169:99:0,509,7057	./.	1/1:0,98:98:99:4093,295,0	1/1:0,66:66:99:2756,199,0	1/1:0,82:82:99:3424,247,0	0/0:189,0:189:99:0,569,7893	0/0:143,0:143:99:0,430,5972	0/0:189,0:189:99:0,569,7893	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:195,0:195:99:0,587,8143	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:145,0:145:99:0,436,6055	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:165,0:165:99:0,497,6890	0/0:56,0:56:99:0,169,2339	1/1:0,109:109:99:4552,328,0
gi|293339394|gb|GU595196.1|	73085	.	A	C	5721.18	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.528;DP=2935;Dels=0.00;FS=72.615;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.059;QD=41.76;ReadPosRankSum=-0.329;SB=-1378.11	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	./.	0/0:104,0:104:99:0,313,4343	1/1:0,54:54:99:2255,163,0	1/1:0,83:83:99:3466,250,0	0/0:176,0:176:99:0,530,7350	0/0:146,0:146:99:0,439,6097	0/0:180,0:180:99:0,542,7517	0/0:182,0:182:99:0,548,7600	0/0:152,0:152:99:0,458,6348	0/0:175,0:175:99:0,527,7308	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:161,0:161:99:0,485,6723	0/0:58,0:58:99:0,175,2422	0/0:108,0:108:99:0,325,4510
gi|293339394|gb|GU595196.1|	73103	.	A	C	14282.05	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.220;DP=2968;Dels=0.00;FS=95.889;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.229;QD=41.76;ReadPosRankSum=1.526;SB=-4468.37	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:177,0:177:99:0,533,7392	./.	1/1:0,103:103:99:4301,310,0	1/1:0,60:60:99:2506,181,0	1/1:0,77:77:99:3216,232,0	0/0:185,0:185:99:0,557,7726	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:157,0:157:99:0,473,6556	0/0:181,0:181:99:0,545,7559	0/0:171,0:171:99:0,515,7141	0/0:183,0:183:99:0,551,7642	0/0:163,0:163:99:0,491,6807	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:178,0:178:99:0,536,7433	0/0:172,0:172:99:0,518,7183	0/0:54,0:54:99:0,163,2255	1/1:0,102:102:99:4260,307,0
gi|293339394|gb|GU595196.1|	73144	.	G	C	12110.52	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-1.471;DP=2902;Dels=0.00;FS=12.584;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.462;QD=41.76;ReadPosRankSum=1.109;SB=-5387.10	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:175,0:175:99:0,527,7308	./.	1/1:0,48:48:99:2004,144,0	1/1:0,62:62:99:2589,187,0	1/1:0,72:72:99:3007,217,0	0/0:187,0:187:99:0,563,7809	0/0:159,0:159:99:0,479,6640	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:176,0:176:99:0,530,7350	0/0:159,0:159:99:0,479,6640	0/0:201,0:201:99:0,605,8394	0/0:192,0:192:99:0,578,8018	0/0:185,0:185:99:0,557,7726	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:179,0:179:99:0,539,7475	0/0:174,0:174:99:0,524,7266	1/1:0,60:60:99:2506,181,0	1/1:0,48:48:99:2004,144,0
gi|293339394|gb|GU595196.1|	73157	.	C	A	2401.95	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.521;DP=2826;Dels=0.00;FS=9.403;HRun=0;HaplotypeScore=1.8997;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.809;QD=40.71;ReadPosRankSum=-0.044;SB=-1002.27	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:182,0:182:99:0,548,7600	./.	0/0:34,0:34:99:0,102,1420	0/0:67,0:67:99:0,202,2798	0/0:79,0:79:99:0,238,3299	0/0:183,0:183:99:0,551,7642	0/0:146,0:146:99:0,439,6097	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:181,0:181:99:0,545,7559	0/0:182,0:182:99:0,548,7600	0/0:177,0:177:99:0,533,7392	0/0:154,0:154:99:0,464,6431	0/0:163,0:163:99:0,491,6807	0/0:173,0:173:99:0,521,7225	1/1:0,59:59:99:2464,178,0	0/0:35,0:35:99:0,105,1462
gi|293339394|gb|GU595196.1|	73167	.	A	C	1501.28	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.612;DP=2770;Dels=0.00;FS=20.892;HRun=1;HaplotypeScore=2.8496;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.315;QD=39.51;ReadPosRankSum=-1.299;SB=-417.61	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:190,0:190:99:0,572,7934	./.	1/1:0,19:19:57.19:793,57,0	0/0:53,0:53:99:0,160,2213	0/0:72,0:72:99:0,217,3007	0/0:193,0:193:99:0,581,8060	0/0:147,0:147:99:0,442,6139	0/0:165,0:165:99:0,497,6890	0/0:157,0:157:99:0,473,6556	0/0:182,0:182:99:0,548,7600	0/0:161,0:161:99:0,485,6723	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	0/0:183,0:183:99:0,551,7642	0/0:179,0:179:99:0,539,7475	0/0:161,0:161:99:0,485,6723	0/0:153,0:153:99:0,461,6389	0/0:164,0:164:99:0,494,6849	0/0:67,0:67:99:0,202,2798	1/1:0,19:19:57.19:793,57,0
gi|293339394|gb|GU595196.1|	73171	.	C	A	1125.47	.	AC=4;AF=0.100;AN=40;BaseQRankSum=1.184;DP=2756;Dels=0.00;FS=36.478;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.604;QD=38.81;ReadPosRankSum=2.623;SB=-167.05	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:191,0:191:99:0,575,7976	./.	1/1:0,12:12:36.12:501,36,0	0/0:55,0:55:99:0,166,2297	0/0:69,0:69:99:0,208,2881	0/0:196,0:196:99:0,590,8185	0/0:144,0:144:99:0,433,6013	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:183,0:183:99:0,551,7642	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:63,0:63:99:0,190,2631	1/1:0,17:17:51.17:710,51,0
gi|293339394|gb|GU595196.1|	73200	.	G	A	12695.16	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-0.051;DP=2908;Dels=0.00;FS=208.298;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.880;QD=41.76;ReadPosRankSum=2.007;SB=-2756.20	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	./.	1/1:0,55:55:99:2297,166,0	1/1:0,51:51:99:2130,154,0	1/1:0,61:61:99:2547,184,0	0/0:201,0:201:99:0,605,8394	0/0:152,0:152:99:0,458,6348	0/0:155,0:155:99:0,467,6473	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	0/0:190,0:190:99:0,572,7934	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	0/0:180,0:180:99:0,542,7517	0/0:176,0:176:99:0,530,7350	1/1:0,76:76:99:3174,229,0	1/1:0,61:61:99:2547,184,0
gi|293339394|gb|GU595196.1|	73219	.	C	T	2568.99	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.080;DP=2946;Dels=0.00;FS=21.607;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.337;QD=40.78;ReadPosRankSum=2.916;SB=-751.70	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	./.	0/0:88,0:88:99:0,265,3675	0/0:51,0:51:99:0,154,2130	0/0:68,0:68:99:0,205,2840	0/0:172,0:172:99:0,518,7183	0/0:152,0:152:99:0,458,6348	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:195,0:195:99:0,587,8143	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:182,0:182:99:0,548,7600	0/0:204,0:204:99:0,614,8519	1/1:0,63:63:99:2631,190,0	0/0:92,0:92:99:0,277,3842
gi|293339394|gb|GU595196.1|	73310	.	T	C	12402.84	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-1.153;DP=2868;Dels=0.00;FS=601.162;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.134;QD=41.76;ReadPosRankSum=3.436;SB=-542.90	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	./.	1/1:0,73:73:99:3049,220,0	1/1:0,64:64:99:2673,193,0	1/1:0,51:51:99:2130,154,0	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:188,0:188:99:0,566,7851	0/0:184,0:184:99:0,554,7684	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:192,0:192:99:0,578,8018	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:156,0:156:99:0,470,6515	0/0:161,0:161:99:0,485,6723	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	1/1:0,39:39:99:1629,117,0	1/1:0,70:70:99:2923,211,0
gi|293339394|gb|GU595196.1|	73312	.	C	G	11901.71	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-1.486;DP=2853;Dels=0.00;FS=569.610;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.977;QD=41.76;ReadPosRankSum=3.567;SB=-542.90	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:159,0:159:99:0,479,6640	./.	1/1:0,70:70:99:2923,211,0	1/1:0,62:62:99:2589,187,0	1/1:0,50:50:99:2088,151,0	0/0:179,0:179:99:0,539,7475	0/0:175,0:175:99:0,527,7308	0/0:188,0:188:99:0,566,7851	0/0:185,0:185:99:0,557,7726	0/0:162,0:162:99:0,488,6765	0/0:161,0:161:99:0,485,6723	0/0:192,0:192:99:0,578,8018	0/0:163,0:163:99:0,491,6807	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	1/1:0,38:38:99:1587,114,0	1/1:0,65:65:99:2714,196,0
gi|293339394|gb|GU595196.1|	73351	.	C	T	3215.35	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.483;DP=2675;Dels=0.00;FS=148.329;HRun=0;HaplotypeScore=2.2775;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.212;QD=40.70;ReadPosRankSum=1.947;SB=-208.82	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	./.	./.	1/1:0,32:32:96.32:1336,96,0	1/1:0,47:47:99:1963,141,0	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	0/0:184,0:184:99:0,554,7684	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:200,0:200:99:0,602,8352	0/0:164,0:164:99:0,494,6849	0/0:164,0:164:99:0,494,6849	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	0/0:146,0:146:99:0,439,6097	0/0:46,0:46:99:0,138,1921	./.
gi|293339394|gb|GU595196.1|	73360	.	T	A	5888.23	.	AC=6;AF=0.167;AN=36;BaseQRankSum=-0.472;DP=2679;Dels=0.00;FS=253.939;HRun=0;HaplotypeScore=2.2775;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.862;QD=41.76;ReadPosRankSum=1.830;SB=-417.62	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:148,0:148:99:0,445,6181	./.	./.	1/1:0,37:37:99:1545,111,0	1/1:0,51:51:99:2130,154,0	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:207,0:207:99:0,623,8644	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:150,0:150:99:0,452,6264	0/0:166,0:166:99:0,500,6932	0/0:154,0:154:99:0,464,6431	1/1:0,53:53:99:2213,160,0	./.
gi|293339394|gb|GU595196.1|	73400	.	A	G	1740.86	.	AC=6;AF=0.167;AN=36;BaseQRankSum=-0.190;DP=2602;Dels=0.00;FS=69.362;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9820;MQ=254.00;MQ0=0;MQRankSum=0.688;QD=39.57;ReadPosRankSum=-0.849;SB=-207.19	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	./.	./.	1/1:0,5:5:15.05:209,15,0	1/1:0,4:4:12.04:167,12,0	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:146,0:146:99:0,439,6097	0/0:187,0:187:99:0,563,7809	0/0:186,0:186:99:0,560,7767	0/0:175,0:175:99:0,527,7308	0/0:160,0:160:99:0,482,6682	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:184,0:184:99:0,554,7684	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	1/1:0,35:35:99:1462,105,0	./.
gi|293339394|gb|GU595196.1|	73413	.	G	T	101.24	.	AC=4;AF=0.111;AN=36;BaseQRankSum=1.109;DP=2456;Dels=0.00;FS=28.954;HRun=0;HaplotypeScore=0.0555;InbreedingCoeff=0.8593;MQ=254.00;MQ0=0;MQRankSum=-0.754;QD=25.31;ReadPosRankSum=-4.071;SB=-8.72	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:181,0:181:99:0,545,7559	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	0/0:162,0:162:99:0,488,6765	0/0:162,4:166:99:0,333,6598	0/0:146,0:146:99:0,439,6097	0/0:148,0:148:99:0,445,6181	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:156,0:156:99:0,470,6515	0/0:152,0:152:99:0,458,6348	0/0:155,0:155:99:0,467,6473	0/0:175,0:175:99:0,527,7308	0/0:181,0:181:99:0,545,7559	0/0:157,0:157:99:0,473,6556	0/0:154,0:154:99:0,464,6431	0/0:20,1:21:21.45:0,21,793	./.
gi|293339394|gb|GU595196.1|	73416	.	A	G	130.85	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.086;DP=2392;Dels=0.00;FS=33.517;HRun=1;HaplotypeScore=0.0526;InbreedingCoeff=0.8273;MQ=254.00;MQ0=0;MQRankSum=-0.359;QD=26.17;ReadPosRankSum=-3.509;SB=0.52	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:173,0:173:99:0,521,7225	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	0/0:158,0:158:99:0,476,6598	0/0:155,5:160:99:0,273,6264	0/0:146,0:146:99:0,439,6097	0/0:148,0:148:99:0,445,6181	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:147,0:147:99:0,442,6139	0/0:154,0:154:99:0,464,6431	0/0:151,0:151:99:0,455,6306	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:153,0:153:99:0,461,6389	0/0:148,0:148:99:0,445,6181	0/0:23,0:23:69.23:0,69,960	./.
gi|293339394|gb|GU595196.1|	73475	.	A	T	1764.18	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-0.219;DP=1593;Dels=0.00;FS=35.718;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9963;MQ=254.00;MQ0=0;MQRankSum=0.113;QD=39.20;ReadPosRankSum=1.032;SB=-735.78	GT:AD:DP:GQ:PL	0/0:80,0:80:99:0,241,3341	0/0:115,0:115:99:0,346,4802	./.	1/1:0,7:7:21.07:292,21,0	1/1:0,13:13:39.13:543,39,0	1/1:0,19:19:57.19:793,57,0	0/0:111,0:111:99:0,334,4635	0/0:106,0:106:99:0,319,4427	0/0:110,0:110:99:0,331,4594	0/0:106,0:106:99:0,319,4427	0/0:96,0:96:99:0,289,4009	0/0:117,0:117:99:0,352,4886	0/0:101,1:102:99:0,265,4176	0/0:108,0:108:99:0,325,4510	0/0:97,0:97:99:0,292,4051	0/0:102,0:102:99:0,307,4260	0/0:99,0:99:99:0,298,4134	0/0:85,0:85:99:0,256,3550	0/0:114,0:114:99:0,343,4761	1/1:0,6:6:18.06:251,18,0	./.
gi|293339394|gb|GU595196.1|	73477	.	A	C	1722.42	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-0.096;DP=1633;Dels=0.00;FS=26.065;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9963;MQ=254.00;MQ0=0;MQRankSum=0.178;QD=39.15;ReadPosRankSum=1.959;SB=-694.02	GT:AD:DP:GQ:PL	0/0:87,0:87:99:0,262,3633	0/0:112,0:112:99:0,337,4677	./.	1/1:0,7:7:21.07:292,21,0	1/1:0,13:13:39.13:543,39,0	1/1:0,18:18:54.18:752,54,0	0/0:108,0:108:99:0,325,4510	0/0:108,0:108:99:0,325,4510	0/0:109,0:109:99:0,328,4552	0/0:107,0:107:99:0,322,4468	0/0:102,0:102:99:0,307,4260	0/0:122,0:122:99:0,367,5095	0/0:109,1:110:99:0,289,4510	0/0:114,0:114:99:0,343,4761	0/0:104,0:104:99:0,313,4343	0/0:102,0:102:99:0,307,4260	0/0:107,0:107:99:0,322,4468	0/0:83,0:83:99:0,250,3466	0/0:114,0:114:99:0,343,4761	1/1:0,6:6:18.06:251,18,0	./.
gi|293339394|gb|GU595196.1|	73545	.	C	T	1630.14	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-0.543;DP=2122;Dels=0.00;FS=74.502;HRun=1;HaplotypeScore=1.1998;InbreedingCoeff=0.6397;MQ=254.00;MQ0=0;MQRankSum=0.930;QD=8.07;ReadPosRankSum=-0.388;SB=-412.23	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:133,0:133:99:0,400,5554	./.	0/1:18,5:23:99:140,0,682	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	0/0:121,0:121:99:0,364,5053	0/1:130,18:148:99:306,0,4983	0/0:136,0:136:99:0,409,5679	0/0:134,0:134:99:0,403,5596	0/0:145,0:145:99:0,436,6055	0/0:144,0:144:99:0,433,6013	0/0:152,0:152:99:0,458,6348	0/0:141,0:141:99:0,424,5888	0/0:132,0:132:99:0,397,5512	0/0:115,0:115:99:0,346,4802	0/0:145,0:145:99:0,436,6055	0/0:140,0:140:99:0,421,5846	0/0:136,0:136:99:0,409,5679	1/1:0,24:24:72.24:1002,72,0	1/1:0,1:1:3.01:42,3,0
gi|293339394|gb|GU595196.1|	73550	.	T	C	1196.81	.	AC=5;AF=0.125;AN=40;BaseQRankSum=-0.364;DP=2160;Dels=0.00;FS=38.290;HRun=1;HaplotypeScore=1.1998;InbreedingCoeff=0.6464;MQ=254.00;MQ0=0;MQRankSum=-0.788;QD=20.28;ReadPosRankSum=1.733;SB=-333.69	GT:AD:DP:GQ:PL	0/0:142,0:142:99:0,427,5930	0/0:133,0:133:99:0,400,5554	./.	0/1:26,7:33:99:193,0,986	0/0:3,0:3:9.03:0,9,125	0/0:4,0:4:12.04:0,12,167	0/0:122,0:122:99:0,367,5095	0/0:166,0:166:99:0,500,6932	0/0:123,0:123:99:0,370,5137	0/0:147,0:147:99:0,442,6139	0/0:147,0:147:99:0,442,6139	0/0:142,0:142:99:0,427,5930	0/0:150,0:150:99:0,452,6264	0/0:141,0:141:99:0,424,5888	0/0:137,0:137:99:0,412,5721	0/0:121,0:121:99:0,364,5053	0/0:153,0:153:99:0,461,6389	0/0:135,0:135:99:0,406,5638	0/0:135,0:135:99:0,406,5638	1/1:0,25:25:75.25:1044,75,0	1/1:0,1:1:3.01:42,3,0
gi|293339394|gb|GU595196.1|	73596	.	G	A	2633.23	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.346;DP=2017;Dels=0.00;FS=58.525;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.7151;MQ=254.00;MQ0=0;MQRankSum=-0.132;QD=10.75;ReadPosRankSum=1.298;SB=-799.71	GT:AD:DP:GQ:PL	0/0:135,0:135:99:0,406,5638	0/0:159,0:159:99:0,479,6640	./.	0/1:36,6:42:99:124,0,1377	1/1:0,7:7:21.07:292,21,0	1/1:0,10:10:30.10:418,30,0	0/0:133,0:133:99:0,400,5554	0/1:128,39:167:99:1126,0,4843	0/0:125,0:125:99:0,376,5220	0/0:107,0:107:99:0,322,4468	0/0:123,0:123:99:0,370,5137	0/0:117,0:117:99:0,352,4886	0/0:111,0:111:99:0,334,4635	0/0:150,0:150:99:0,452,6264	0/0:122,0:122:99:0,367,5095	0/0:119,0:119:99:0,358,4969	0/0:141,0:141:99:0,424,5888	0/0:100,0:100:99:0,301,4176	0/0:130,0:130:99:0,391,5429	1/1:0,16:16:48.16:668,48,0	1/1:0,3:3:9.03:125,9,0
gi|293339394|gb|GU595196.1|	73622	.	G	T	141.37	.	AC=4;AF=0.118;AN=34;BaseQRankSum=0.291;DP=1049;Dels=0.00;FS=28.226;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.8784;MQ=254.00;MQ0=0;MQRankSum=0.223;QD=28.27;ReadPosRankSum=-3.960;SB=-34.07	GT:AD:DP:GQ:PL	0/0:62,0:62:99:0,187,2589	0/0:84,0:84:99:0,253,3508	./.	1/1:0,4:4:12.04:167,12,0	1/1:0,1:1:3.01:42,3,0	./.	0/0:72,0:72:99:0,217,3007	0/0:59,2:61:99:0,100,2380	0/0:78,0:78:99:0,235,3257	0/0:52,0:52:99:0,157,2172	0/0:71,0:71:99:0,214,2965	0/0:72,0:72:99:0,217,3007	0/0:49,0:49:99:0,147,2046	0/0:88,0:88:99:0,265,3675	0/0:74,0:74:99:0,223,3090	0/0:74,0:74:99:0,223,3090	0/0:75,0:75:99:0,226,3132	0/0:66,0:66:99:0,199,2756	0/0:66,0:66:99:0,199,2756	./.	./.
gi|293339394|gb|GU595196.1|	73623	.	T	C	74.76	.	AC=2;AF=0.063;AN=32;BaseQRankSum=1.219;DP=1012;Dels=0.00;FS=25.212;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9375;MQ=254.00;MQ0=0;MQRankSum=-0.764;QD=24.92;ReadPosRankSum=-2.694;SB=0.02	GT:AD:DP:GQ:PL	0/0:59,0:59:99:0,178,2464	0/0:82,0:82:99:0,247,3424	./.	1/1:0,3:3:9.03:125,9,0	./.	./.	0/0:68,0:68:99:0,205,2840	0/0:56,0:56:99:0,169,2339	0/0:78,0:78:99:0,235,3257	0/0:53,0:53:99:0,160,2213	0/0:65,0:65:99:0,196,2714	0/0:67,0:67:99:0,202,2798	0/0:48,0:48:99:0,144,2004	0/0:88,0:88:99:0,265,3675	0/0:72,0:72:99:0,217,3007	0/0:72,0:72:99:0,217,3007	0/0:75,0:75:99:0,226,3132	0/0:63,0:63:99:0,190,2631	0/0:63,0:63:99:0,190,2631	./.	./.
gi|293339394|gb|GU595196.1|	73726	.	A	T	261.29	.	AC=1;AF=0.026;AN=38;BaseQRankSum=0.339;DP=1286;Dels=0.00;FS=15.119;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=-0.0343;MQ=254.00;MQ0=0;MQRankSum=-0.561;QD=26.13;ReadPosRankSum=-0.959;SB=-16.81	GT:AD:DP:GQ:PL	0/0:70,0:70:99:0,211,2923	0/0:90,0:90:99:0,271,3758	./.	0/0:19,0:19:57.19:0,57,793	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.04:0,12,167	0/0:80,0:80:99:0,241,3341	0/0:107,0:107:99:0,322,4468	0/0:101,0:101:99:0,304,4218	0/0:66,0:66:99:0,199,2756	0/0:83,0:83:99:0,250,3466	0/0:81,0:81:99:0,244,3383	0/0:77,0:77:99:0,232,3216	0/0:100,0:100:99:0,301,4176	0/0:88,0:88:99:0,265,3675	0/0:69,0:69:99:0,208,2881	0/0:85,0:85:99:0,256,3550	0/0:72,0:72:99:0,217,3007	0/0:82,0:82:99:0,247,3424	0/1:2,8:10:53.42:304,0,53	./.
gi|293339394|gb|GU595196.1|	73738	.	G	A	1244.16	.	AC=7;AF=0.184;AN=38;BaseQRankSum=-0.724;DP=1404;Dels=0.00;FS=22.910;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.7726;MQ=254.00;MQ0=0;MQRankSum=0.184;QD=10.03;ReadPosRankSum=1.009;SB=-304.48	GT:AD:DP:GQ:PL	0/0:84,0:84:99:0,253,3508	0/0:98,0:98:99:0,295,4093	./.	0/0:18,0:18:54.18:0,54,752	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	0/0:88,0:88:99:0,265,3675	0/1:84,25:109:99:716,0,3180	0/0:110,0:110:99:0,331,4594	0/0:71,0:71:99:0,214,2965	0/0:85,0:85:99:0,256,3550	0/0:90,0:90:99:0,271,3758	0/0:77,0:77:99:0,232,3216	0/0:100,0:100:99:0,301,4176	0/0:92,0:92:99:0,277,3842	0/0:93,0:93:99:0,280,3884	0/0:95,0:95:99:0,286,3967	0/0:83,0:83:99:0,250,3466	0/0:96,0:96:99:0,289,4009	1/1:0,9:9:27.09:376,27,0	./.
gi|293339394|gb|GU595196.1|	73758	.	T	C	58494.56	.	AC=27;AF=0.750;AN=36;BaseQRankSum=0.004;DP=1568;Dels=0.00;FS=2.103;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=0.8187;MQ=254.00;MQ0=0;MQRankSum=0.603;QD=41.08;ReadPosRankSum=0.418;SB=-28305.02	GT:AD:DP:GQ:PL	1/1:0,99:99:99:4134,298,0	1/1:0,114:114:99:4761,343,0	./.	0/0:8,0:8:24.08:0,24,334	./.	0/0:2,0:2:6.02:0,6,84	1/1:0,99:99:99:4134,298,0	0/1:14,87:101:99:3329,0,281	0/0:124,0:124:99:0,373,5178	1/1:0,89:89:99:3717,268,0	1/1:0,89:89:99:3717,268,0	1/1:0,116:116:99:4844,349,0	1/1:1,88:89:99:3633,226,0	1/1:0,101:101:99:4218,304,0	1/1:0,105:105:99:4385,316,0	1/1:0,108:108:99:4510,325,0	1/1:0,108:108:99:4510,325,0	1/1:0,99:99:99:4134,298,0	1/1:0,107:107:99:4468,322,0	0/0:10,0:10:30.10:0,30,418	./.
gi|293339394|gb|GU595196.1|	73774	.	G	T	32.21	.	AC=1;AF=0.029;AN=34;BaseQRankSum=-0.042;DP=1650;Dels=0.00;FS=6.668;HRun=1;HaplotypeScore=0.0588;InbreedingCoeff=-0.0293;MQ=254.00;MQ0=0;MQRankSum=0.427;QD=10.74;ReadPosRankSum=-2.439;SB=-0.02	GT:AD:DP:GQ:PL	0/0:114,0:114:99:0,343,4761	0/0:131,0:131:99:0,394,5471	./.	0/1:1,2:3:32.73:74,0,33	./.	./.	0/0:109,0:109:99:0,328,4552	0/0:90,0:90:99:0,271,3758	0/0:125,0:125:99:0,376,5220	0/0:101,0:101:99:0,304,4218	0/0:87,0:87:99:0,262,3633	0/0:115,0:115:99:0,346,4802	0/0:104,0:104:99:0,313,4343	0/0:104,0:104:99:0,313,4343	0/0:109,0:109:99:0,328,4552	0/0:114,0:114:99:0,343,4761	0/0:108,0:108:99:0,325,4510	0/0:113,0:113:99:0,340,4719	0/0:114,0:114:99:0,343,4761	0/0:9,0:9:27.09:0,27,376	./.
gi|293339394|gb|GU595196.1|	73775	.	C	G	109.71	.	AC=1;AF=0.029;AN=34;BaseQRankSum=0.927;DP=1656;Dels=0.00;FS=13.457;HRun=1;HaplotypeScore=0.0588;InbreedingCoeff=-0.0261;MQ=254.00;MQ0=0;MQRankSum=0.831;QD=21.94;ReadPosRankSum=-3.116;SB=-0.02	GT:AD:DP:GQ:PL	0/0:114,0:114:99:0,343,4761	0/0:136,0:136:99:0,409,5679	./.	0/1:1,4:5:26.71:152,0,27	./.	./.	0/0:106,0:106:99:0,319,4427	0/0:88,0:88:99:0,265,3675	0/0:125,0:125:99:0,376,5220	0/0:97,0:97:99:0,292,4051	0/0:85,0:85:99:0,256,3550	0/0:116,0:116:99:0,349,4844	0/0:104,0:104:99:0,313,4343	0/0:108,0:108:99:0,325,4510	0/0:109,0:109:99:0,328,4552	0/0:115,0:115:99:0,346,4802	0/0:111,0:111:99:0,334,4635	0/0:114,0:114:99:0,343,4761	0/0:115,0:115:99:0,346,4802	0/0:8,0:8:24.08:0,24,334	./.
gi|293339394|gb|GU595196.1|	73787	.	G	A	585.39	.	AC=4;AF=0.105;AN=38;BaseQRankSum=0.189;DP=1717;Dels=0.00;FS=9.076;HRun=0;HaplotypeScore=0.1579;InbreedingCoeff=0.9081;MQ=254.00;MQ0=0;MQRankSum=-0.053;QD=36.59;ReadPosRankSum=-0.771;SB=-228.02	GT:AD:DP:GQ:PL	0/0:103,0:103:99:0,310,4301	0/0:143,0:143:99:0,430,5972	./.	0/0:9,0:9:27.09:0,27,376	0/0:1,0:1:3.01:0,3,42	1/1:0,6:6:18.06:251,18,0	0/0:124,0:124:99:0,373,5178	0/0:109,0:109:99:0,328,4552	0/0:124,0:124:99:0,373,5178	0/0:102,0:102:99:0,307,4260	0/0:88,0:88:99:0,265,3675	0/0:118,0:118:99:0,355,4928	0/0:100,0:100:99:0,301,4176	0/0:121,0:121:99:0,364,5053	0/0:97,0:97:99:0,292,4051	0/0:107,0:107:99:0,322,4468	0/0:113,0:113:99:0,340,4719	0/0:124,0:124:99:0,373,5178	0/0:118,0:118:99:0,355,4928	1/1:0,10:10:30.10:418,30,0	./.
gi|293339394|gb|GU595196.1|	73831	.	T	C	63433.97	.	AC=38;AF=0.950;AN=40;BaseQRankSum=0.157;DP=1614;Dels=0.00;FS=2.209;HRun=1;HaplotypeScore=0.0500;InbreedingCoeff=0.9003;MQ=254.00;MQ0=0;MQRankSum=-0.708;QD=41.76;ReadPosRankSum=2.826;SB=-13236.99	GT:AD:DP:GQ:PL	1/1:0,102:102:99:4260,307,0	1/1:0,111:111:99:4635,334,0	./.	1/1:0,21:21:63.21:877,63,0	1/1:0,13:13:39.13:543,39,0	1/1:0,27:27:81.27:1128,81,0	1/1:0,114:114:99:4761,343,0	1/1:0,115:115:99:4802,346,0	0/0:95,0:95:99:0,286,3967	1/1:0,103:103:99:4301,310,0	1/1:0,108:108:99:4510,325,0	1/1:0,96:96:99:4009,289,0	1/1:0,92:92:99:3842,277,0	1/1:0,104:104:99:4343,313,0	1/1:0,87:87:99:3633,262,0	1/1:0,97:97:99:4051,292,0	1/1:0,97:97:99:4051,292,0	1/1:0,114:114:99:4761,343,0	1/1:0,109:109:99:4552,328,0	1/1:0,7:7:21.07:292,21,0	1/1:0,2:2:6.02:84,6,0
gi|293339394|gb|GU595196.1|	73849	.	T	C	3108.77	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.490;DP=1403;Dels=0.00;FS=58.209;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.3717;MQ=254.00;MQ0=0;MQRankSum=0.739;QD=16.62;ReadPosRankSum=-1.439;SB=-1184.81	GT:AD:DP:GQ:PL	0/0:76,0:76:99:0,229,3174	0/0:89,0:89:99:0,268,3717	./.	0/1:9,23:32:99:864,0,280	0/1:4,13:17:99:492,0,116	0/1:3,23:26:47.02:882,0,47	0/0:98,0:98:99:0,295,4093	0/1:82,10:92:99:141,0,3147	0/0:78,0:78:99:0,235,3257	0/0:96,0:96:99:0,289,4009	0/0:92,0:92:99:0,277,3842	0/0:88,0:88:99:0,265,3675	0/0:70,0:70:99:0,211,2923	0/0:83,0:83:99:0,250,3466	0/0:82,0:82:99:0,247,3424	0/0:92,0:92:99:0,277,3842	0/0:87,0:87:99:0,262,3633	0/0:86,0:86:99:0,259,3591	0/0:99,0:99:99:0,298,4134	1/1:0,6:6:18.06:251,18,0	1/1:0,14:14:42.14:585,42,0
gi|293339394|gb|GU595196.1|	73881	.	A	T	1354.86	.	AC=5;AF=0.132;AN=38;BaseQRankSum=1.195;DP=533;Dels=0.00;FS=41.496;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.3153;MQ=254.00;MQ0=0;MQRankSum=-3.311;QD=28.83;ReadPosRankSum=-2.914;SB=-714.93	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,585	0/0:22,0:22:66.22:0,66,919	./.	0/1:2,20:22:17.30:769,0,17	0/1:4,3:7:99:104,0,146	0/1:4,2:6:65.46:65,0,149	0/0:21,0:21:63.21:0,63,877	0/0:29,0:29:87.29:0,87,1211	0/0:143,0:143:99:0,430,5972	0/0:25,0:25:75.25:0,75,1044	0/0:28,0:28:84.28:0,84,1169	0/0:24,0:24:72.24:0,72,1002	0/0:19,0:19:57.19:0,57,793	0/0:26,0:26:78.26:0,78,1086	0/0:24,0:24:72.24:0,72,1002	0/0:36,0:36:99:0,108,1503	0/0:28,0:28:84.28:0,84,1169	0/0:21,0:21:63.21:0,63,877	0/0:26,0:26:78.26:0,78,1086	./.	1/1:0,12:12:36.12:501,36,0
gi|293339394|gb|GU595196.1|	73892	.	C	G	2060.75	.	AC=30;AF=0.938;AN=32;BaseQRankSum=0.430;DP=214;Dels=0.00;FS=96.938;HRun=4;HaplotypeScore=0.0000;InbreedingCoeff=0.4100;MQ=254.00;MQ0=0;MQRankSum=1.386;QD=40.41;ReadPosRankSum=-9.937;SB=-41.77	GT:AD:DP:GQ:PL	1/1:0,3:3:9.03:125,9,0	1/1:0,3:3:9.03:125,9,0	./.	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,6:6:18.06:251,18,0	0/0:163,0:163:99:0,491,6807	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:12.04:167,12,0	1/1:0,8:8:24.08:334,24,0	1/1:0,2:2:6.02:84,6,0	1/1:0,6:6:18.06:251,18,0	1/1:0,1:1:3.01:42,3,0	1/1:0,5:5:15.05:209,15,0	1/1:0,1:1:3.01:42,3,0	1/1:0,4:4:12.04:167,12,0	1/1:0,2:2:6.02:84,6,0	./.	./.
gi|293339394|gb|GU595196.1|	73893	.	A	C	856.57	.	AC=20;AF=0.909;AN=22;BaseQRankSum=0.112;DP=186;Dels=0.00;FS=39.516;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.3644;MQ=254.00;MQ0=0;MQRankSum=1.170;QD=38.94;ReadPosRankSum=-7.509;SB=-41.72	GT:AD:DP:GQ:PL	./.	1/1:0,2:2:6.02:84,6,0	./.	./.	./.	./.	./.	1/1:0,3:3:9.03:125,9,0	0/0:164,0:164:99:0,494,6849	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	1/1:0,5:5:15.05:209,15,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,4:4:12.04:167,12,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	./.	./.
gi|293339394|gb|GU595196.1|	73900	.	C	A	854.81	.	AC=24;AF=0.923;AN=26;BaseQRankSum=-0.086;DP=195;Dels=0.00;FS=55.602;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.2846;MQ=254.00;MQ0=0;MQRankSum=-0.022;QD=38.86;ReadPosRankSum=-7.370;SB=-0.02	GT:AD:DP:GQ:PL	1/1:0,2:2:6.02:84,6,0	./.	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	0/0:173,0:173:99:0,521,7225	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	./.	1/1:0,2:2:6.02:84,6,0	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0
gi|293339394|gb|GU595196.1|	73901	.	A	G	2101.45	.	AC=32;AF=0.941;AN=34;BaseQRankSum=0.241;DP=224;Dels=0.00;FS=117.698;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.4133;MQ=254.00;MQ0=0;MQRankSum=1.537;QD=40.41;ReadPosRankSum=-10.218;SB=-0.02	GT:AD:DP:GQ:PL	1/1:0,5:5:15.05:209,15,0	1/1:0,3:3:9.03:125,9,0	./.	./.	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,5:5:15.05:209,15,0	1/1:0,4:4:12.04:167,12,0	0/0:172,0:172:99:0,518,7183	1/1:0,7:7:21.07:292,21,0	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	1/1:0,3:3:9.03:125,9,0	1/1:0,3:3:9.03:125,9,0	1/1:0,5:5:15.05:209,15,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0
gi|293339394|gb|GU595196.1|	73961	.	A	G	483.83	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-0.778;DP=2411;Dels=0.00;FS=33.237;HRun=1;HaplotypeScore=0.1052;InbreedingCoeff=0.9030;MQ=254.00;MQ0=0;MQRankSum=0.244;QD=34.56;ReadPosRankSum=2.222;SB=-32.80	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:157,0:157:99:0,473,6556	./.	./.	1/1:0,6:6:18.06:251,18,0	1/1:0,5:5:15.05:209,15,0	0/0:153,0:153:99:0,461,6389	0/0:153,0:153:99:0,461,6389	0/0:166,0:166:99:0,500,6932	0/0:155,0:155:99:0,467,6473	0/0:148,0:148:99:0,445,6181	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:151,0:151:99:0,455,6306	0/0:142,0:142:99:0,427,5930	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0
gi|293339394|gb|GU595196.1|	73963	.	A	C	35.22	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.674;DP=2473;Dels=0.00;FS=6.698;HRun=1;HaplotypeScore=0.1111;InbreedingCoeff=0.8597;MQ=254.00;MQ0=0;MQRankSum=-1.503;QD=17.61;ReadPosRankSum=-1.432;SB=-0.02	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:163,0:163:99:0,491,6807	./.	./.	0/0:6,0:6:18.06:0,18,251	0/0:5,0:5:15.05:0,15,209	0/0:157,0:157:99:0,473,6556	0/0:153,0:153:99:0,461,6389	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	0/0:151,0:151:99:0,455,6306	0/0:173,0:173:99:0,521,7225	0/0:176,0:176:99:0,530,7350	0/0:181,0:181:99:0,545,7559	0/0:175,0:175:99:0,527,7308	0/0:156,0:156:99:0,470,6515	0/0:146,0:146:99:0,439,6097	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	1/1:0,2:2:6.02:84,6,0	./.
gi|293339394|gb|GU595196.1|	73976	.	G	A	339.62	.	AC=4;AF=0.118;AN=34;BaseQRankSum=-1.204;DP=2542;Dels=0.00;FS=32.108;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9826;MQ=254.00;MQ0=0;MQRankSum=0.730;QD=33.96;ReadPosRankSum=-2.837;SB=-0.02	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:191,0:191:99:0,575,7976	./.	./.	1/1:0,5:5:15.05:209,15,0	1/1:0,5:5:15.05:209,15,0	0/0:180,0:180:99:0,542,7517	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:152,0:152:99:0,458,6348	0/0:183,0:183:99:0,551,7642	0/0:178,0:178:99:0,536,7433	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:167,0:167:99:0,503,6974	0/0:143,0:143:99:0,430,5972	0/0:161,0:161:99:0,485,6723	0/0:172,0:172:99:0,518,7183	./.	./.
gi|293339394|gb|GU595196.1|	73997	.	T	C	527.14	.	AC=8;AF=0.211;AN=38;BaseQRankSum=0.016;DP=2451;Dels=0.00;FS=49.395;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8990;MQ=254.00;MQ0=0;MQRankSum=-0.245;QD=35.14;ReadPosRankSum=-3.330;SB=-0.02	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:195,0:195:99:0,587,8143	./.	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	1/1:0,9:9:27.09:376,27,0	0/0:174,0:174:99:0,524,7266	0/0:139,0:139:99:0,418,5805	0/0:151,0:151:99:0,455,6306	0/0:180,0:180:99:0,542,7517	0/0:150,0:150:99:0,452,6264	0/0:178,0:178:99:0,536,7433	0/0:162,0:162:99:0,488,6765	0/0:152,0:152:99:0,458,6348	0/0:160,0:160:99:0,482,6682	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:167,0:167:99:0,503,6974	0/0:150,0:150:99:0,452,6264	./.	1/1:0,2:2:6.02:84,6,0
gi|293339394|gb|GU595196.1|	74012	.	T	A	1169.54	.	AC=4;AF=0.105;AN=38;BaseQRankSum=0.733;DP=2412;Dels=0.00;FS=99.107;HRun=4;HaplotypeScore=0.0000;InbreedingCoeff=0.9790;MQ=254.00;MQ0=0;MQRankSum=0.165;QD=38.98;ReadPosRankSum=-0.379;SB=-0.02	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:182,0:182:99:0,548,7600	./.	0/0:5,0:5:15.05:0,15,209	1/1:0,6:6:18.06:251,18,0	1/1:0,24:24:72.24:1002,72,0	0/0:159,0:159:99:0,479,6640	0/0:137,0:137:99:0,412,5721	0/0:148,0:148:99:0,445,6181	0/0:173,0:173:99:0,521,7225	0/0:150,0:150:99:0,452,6264	0/0:164,0:164:99:0,494,6849	0/0:138,0:138:99:0,415,5763	0/0:160,0:160:99:0,482,6682	0/0:148,0:148:99:0,445,6181	0/0:155,0:155:99:0,467,6473	0/0:159,0:159:99:0,479,6640	0/0:182,0:182:99:0,548,7600	0/0:156,0:156:99:0,470,6515	./.	0/0:5,0:5:15.05:0,15,209
gi|293339394|gb|GU595196.1|	74053	.	T	G	2139.23	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-0.116;DP=2278;Dels=0.00;FS=205.748;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=0.642;QD=39.62;ReadPosRankSum=1.357;SB=-0.02	GT:AD:DP:GQ:PL	0/0:144,0:144:99:0,433,6013	0/0:148,0:148:99:0,445,6181	./.	1/1:0,10:10:30.10:418,30,0	1/1:0,11:11:33.11:459,33,0	1/1:0,22:22:66.22:919,66,0	0/0:163,0:163:99:0,491,6807	0/0:143,0:143:99:0,430,5972	0/0:172,0:172:99:0,518,7183	0/0:147,0:147:99:0,442,6139	0/0:139,0:139:99:0,418,5805	0/0:145,0:145:99:0,436,6055	0/0:133,0:133:99:0,400,5554	0/0:155,0:155:99:0,467,6473	0/0:147,0:147:99:0,442,6139	0/0:141,0:141:99:0,424,5888	0/0:153,0:153:99:0,461,6389	0/0:141,0:141:99:0,424,5888	0/0:153,0:153:99:0,461,6389	./.	1/1:0,11:11:33.11:459,33,0
gi|293339394|gb|GU595196.1|	74079	.	T	A	202.41	.	AC=8;AF=0.211;AN=38;BaseQRankSum=1.288;DP=1996;Dels=0.00;FS=30.742;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.8292;MQ=254.00;MQ0=0;MQRankSum=-1.249;QD=28.92;ReadPosRankSum=-3.601;SB=-0.02	GT:AD:DP:GQ:PL	0/0:117,0:117:99:0,352,4886	0/0:115,0:115:99:0,346,4802	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	0/0:127,0:127:99:0,382,5304	0/0:136,0:136:99:0,409,5679	0/0:180,0:180:99:0,542,7517	0/0:121,0:121:99:0,364,5053	0/0:123,0:123:99:0,370,5137	0/0:128,0:128:99:0,385,5345	0/0:135,0:135:99:0,406,5638	0/0:138,0:138:99:0,415,5763	0/0:137,0:137:99:0,412,5721	0/0:134,0:134:99:0,403,5596	0/0:134,0:134:99:0,403,5596	0/0:139,0:139:99:0,418,5805	0/0:125,0:125:99:0,376,5220	./.	1/1:0,1:1:3.01:42,3,0
gi|293339394|gb|GU595196.1|	75841	.	A	C	79.77	.	AC=1;AF=0.033;AN=30;BaseQRankSum=-0.225;DP=2376;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.6666;InbreedingCoeff=-0.0345;MQ=254.00;MQ0=0;MQRankSum=-0.041;QD=2.75;ReadPosRankSum=-3.775;SB=-44.41	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:146,0:146:99:0,439,6097	./.	./.	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:152,0:152:99:0,458,6348	0/0:165,0:165:99:0,497,6890	0/1:24,5:29:99:122,0,915	0/0:150,0:150:99:0,452,6264	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:195,0:195:99:0,587,8143	0/0:177,0:177:99:0,533,7392	0/0:199,0:199:99:0,599,8310	0/0:168,0:168:99:0,506,7016	0/0:149,0:149:99:0,448,6222	0/0:169,0:169:99:0,509,7057	./.	./.
gi|293339394|gb|GU595196.1|	75842	.	C	T	160.28	.	AC=1;AF=0.033;AN=30;BaseQRankSum=0.646;DP=2372;Dels=0.00;FS=1.407;HRun=5;HaplotypeScore=0.7999;InbreedingCoeff=-0.0345;MQ=254.00;MQ0=0;MQRankSum=0.499;QD=5.34;ReadPosRankSum=-4.248;SB=-77.14	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:143,0:143:99:0,430,5972	./.	./.	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:152,0:152:99:0,458,6348	0/0:167,0:167:99:0,503,6974	0/1:23,7:30:99:202,0,870	0/0:149,0:149:99:0,448,6222	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:192,0:192:99:0,578,8018	0/0:177,0:177:99:0,533,7392	0/0:200,0:200:99:0,602,8352	0/0:169,0:169:99:0,509,7057	0/0:145,0:145:99:0,436,6055	0/0:168,0:168:99:0,506,7016	./.	./.
gi|293339394|gb|GU595196.1|	75848	.	G	T	303.24	.	AC=1;AF=0.033;AN=30;BaseQRankSum=-0.380;DP=2393;Dels=0.00;FS=6.465;HRun=5;HaplotypeScore=0.7999;InbreedingCoeff=-0.0345;MQ=254.00;MQ0=0;MQRankSum=-0.089;QD=7.98;ReadPosRankSum=-5.351;SB=-80.15	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:145,0:145:99:0,436,6055	./.	./.	./.	./.	0/0:179,0:179:99:0,539,7475	0/0:153,0:153:99:0,461,6389	0/0:170,0:170:99:0,512,7099	0/1:27,11:38:99:345,0,1013	0/0:154,0:154:99:0,464,6431	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	0/0:180,0:180:99:0,542,7517	0/0:177,0:177:99:0,533,7392	0/0:205,0:205:99:0,617,8561	0/0:164,0:164:99:0,494,6849	0/0:145,0:145:99:0,436,6055	0/0:165,0:165:99:0,497,6890	./.	./.
gi|293339394|gb|GU595196.1|	75849	.	C	G	55.69	.	AC=1;AF=0.033;AN=30;BaseQRankSum=-0.222;DP=2375;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.6666;InbreedingCoeff=-0.0345;MQ=254.00;MQ0=0;MQRankSum=0.300;QD=1.51;ReadPosRankSum=-3.753;SB=-35.38	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:146,0:146:99:0,439,6097	./.	./.	./.	./.	0/0:177,0:177:99:0,533,7392	0/0:152,0:152:99:0,458,6348	0/0:168,0:168:99:0,506,7016	0/1:32,5:37:97.43:97,0,1225	0/0:155,0:155:99:0,467,6473	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:198,0:198:99:0,596,8269	0/0:163,0:163:99:0,491,6807	0/0:144,0:144:99:0,433,6013	0/0:168,0:168:99:0,506,7016	./.	./.
gi|293339394|gb|GU595196.1|	75955	.	C	G	250.12	.	AC=6;AF=0.167;AN=36;BaseQRankSum=-0.040;DP=2489;Dels=0.00;FS=63.074;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8919;MQ=254.00;MQ0=0;MQRankSum=0.658;QD=31.27;ReadPosRankSum=5.508;SB=-0.02	GT:AD:DP:GQ:PL	0/0:190,0:190:99:0,572,7934	0/0:149,0:149:99:0,448,6222	./.	1/1:0,4:4:12.04:167,12,0	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	0/0:196,0:196:99:0,590,8185	0/0:150,0:150:99:0,452,6264	0/0:175,0:175:99:0,527,7308	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:174,2:176:99:0,446,7183	0/0:171,2:173:99:0,437,7057	0/0:149,0:149:99:0,448,6222	0/0:169,0:169:99:0,509,7057	0/0:165,2:167:99:0,419,6807	0/0:150,4:154:99:0,297,6097	0/0:167,2:169:99:0,425,6890	0/0:139,0:139:99:0,418,5805	./.	./.
gi|293339394|gb|GU595196.1|	75968	.	T	C	219.68	.	AC=4;AF=0.118;AN=34;BaseQRankSum=0.234;DP=2528;Dels=0.00;FS=55.516;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9500;MQ=254.00;MQ0=0;MQRankSum=-0.555;QD=31.38;ReadPosRankSum=1.305;SB=-0.02	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:140,0:140:99:0,421,5846	./.	1/1:0,4:4:12.04:167,12,0	1/1:0,3:3:9.03:125,9,0	./.	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:156,0:156:99:0,470,6515	0/0:167,0:167:99:0,503,6974	0/0:180,2:182:99:0,464,7433	0/0:176,1:177:99:0,491,7308	0/0:156,0:156:99:0,470,6515	0/0:179,0:179:99:0,539,7475	0/0:173,2:175:99:0,443,7141	0/0:159,4:163:99:0,324,6473	0/0:165,2:167:99:0,419,6807	0/0:158,0:158:99:0,476,6598	./.	./.
gi|293339394|gb|GU595196.1|	76041	.	T	C	56.32	.	AC=3;AF=0.088;AN=34;BaseQRankSum=2.060;DP=2075;Dels=0.00;FS=11.409;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.5331;MQ=254.00;MQ0=0;MQRankSum=0.295;QD=11.26;ReadPosRankSum=-0.672;SB=-0.02	GT:AD:DP:GQ:PL	0/0:134,0:134:99:0,403,5596	0/0:133,0:133:99:0,400,5554	./.	1/1:0,2:2:6.02:84,6,0	./.	./.	0/0:132,0:132:99:0,397,5512	0/0:125,0:125:99:0,376,5220	0/0:123,0:123:99:0,370,5137	0/0:108,0:108:99:0,325,4510	0/0:155,0:155:99:0,467,6473	0/0:150,0:150:99:0,452,6264	0/0:153,0:153:99:0,461,6389	0/0:148,0:148:99:0,445,6181	0/0:130,0:130:99:0,391,5429	0/0:142,0:142:99:0,427,5930	0/0:125,0:125:99:0,376,5220	0/0:153,0:153:99:0,461,6389	0/0:159,0:159:99:0,479,6640	0/1:2,1:3:32.73:33,0,74	./.
gi|293339394|gb|GU595196.1|	76073	.	C	T	687.69	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.254;DP=1605;Dels=0.00;FS=216.668;HRun=0;HaplotypeScore=0.1052;InbreedingCoeff=0.5740;MQ=254.00;MQ0=0;MQRankSum=-1.324;QD=5.55;ReadPosRankSum=-1.856;SB=0.05	GT:AD:DP:GQ:PL	0/0:110,0:110:99:0,331,4594	0/0:107,0:107:99:0,322,4468	./.	0/0:11,0:11:33.11:0,33,459	./.	1/1:0,4:4:12.04:167,12,0	0/1:93,17:110:99:379,0,3553	0/0:83,0:83:99:0,250,3466	0/0:118,0:118:99:0,355,4928	0/0:66,0:66:99:0,199,2756	0/0:111,0:111:99:0,334,4635	0/0:97,0:97:99:0,292,4051	0/0:99,0:99:99:0,298,4134	0/0:110,0:110:99:0,331,4594	0/0:114,0:114:99:0,343,4761	0/0:128,0:128:99:0,385,5345	0/0:102,0:102:99:0,307,4260	0/0:115,0:115:99:0,346,4802	0/0:110,0:110:99:0,331,4594	0/1:4,2:6:65.46:65,0,149	1/1:0,4:4:12.04:167,12,0
gi|293339394|gb|GU595196.1|	76079	.	T	C	486.72	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.582;DP=1509;Dels=0.00;FS=207.730;HRun=0;HaplotypeScore=0.1052;InbreedingCoeff=0.5814;MQ=254.00;MQ0=0;MQRankSum=0.981;QD=3.99;ReadPosRankSum=0.254;SB=0.19	GT:AD:DP:GQ:PL	0/0:100,0:100:99:0,301,4176	0/0:103,0:103:99:0,310,4301	./.	0/0:11,0:11:33.11:0,33,459	./.	1/1:0,4:4:12.04:167,12,0	0/1:96,10:106:98.54:99,0,3690	0/0:83,0:83:99:0,250,3466	0/0:103,0:103:99:0,310,4301	0/0:70,0:70:99:0,211,2923	0/0:100,0:100:99:0,301,4176	0/0:94,0:94:99:0,283,3925	0/0:90,0:90:99:0,271,3758	0/0:103,0:103:99:0,310,4301	0/0:107,0:107:99:0,322,4468	0/0:120,0:120:99:0,361,5011	0/0:106,0:106:99:0,319,4427	0/0:100,0:100:99:0,301,4176	0/0:97,0:97:99:0,292,4051	0/1:4,3:7:99:104,0,146	1/1:0,5:5:15.05:209,15,0
gi|293339394|gb|GU595196.1|	76099	.	C	T	332.68	.	AC=3;AF=0.079;AN=38;BaseQRankSum=0.526;DP=1352;Dels=0.00;FS=117.793;HRun=0;HaplotypeScore=0.1052;InbreedingCoeff=0.6162;MQ=254.00;MQ0=0;MQRankSum=0.937;QD=27.72;ReadPosRankSum=-0.845;SB=1.28	GT:AD:DP:GQ:PL	0/0:89,0:89:99:0,268,3717	0/0:92,0:92:99:0,277,3842	./.	1/1:0,7:7:21.07:292,21,0	./.	0/0:4,0:4:12.04:0,12,167	0/0:95,0:95:99:0,286,3967	0/0:79,0:79:99:0,238,3299	0/0:92,0:92:99:0,277,3842	0/0:66,0:66:99:0,199,2756	0/0:79,0:79:99:0,238,3299	0/0:87,0:87:99:0,262,3633	0/0:87,0:87:99:0,262,3633	0/0:86,0:86:99:0,259,3591	0/0:100,0:100:99:0,301,4176	0/0:110,0:110:99:0,331,4594	0/0:91,0:91:99:0,274,3800	0/0:94,0:94:99:0,283,3925	0/0:83,0:83:99:0,250,3466	0/1:2,3:5:68.47:110,0,68	0/0:6,0:6:18.06:0,18,251
gi|293339394|gb|GU595196.1|	76108	.	G	A	74.07	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-0.100;DP=1326;Dels=0.00;FS=39.687;HRun=0;HaplotypeScore=0.1579;InbreedingCoeff=0.7702;MQ=254.00;MQ0=0;MQRankSum=0.503;QD=24.69;ReadPosRankSum=-1.358;SB=0.96	GT:AD:DP:GQ:PL	0/0:92,0:92:99:0,277,3842	0/0:85,0:85:99:0,256,3550	./.	1/1:0,3:3:9.03:125,9,0	./.	0/0:1,0:1:3.01:0,3,42	0/0:97,0:97:99:0,292,4051	0/0:81,0:81:99:0,244,3383	0/0:91,0:91:99:0,274,3800	0/0:65,0:65:99:0,196,2714	0/0:84,0:84:99:0,253,3508	0/0:94,0:94:99:0,283,3925	0/0:85,0:85:99:0,256,3550	0/0:78,0:78:99:0,235,3257	0/0:99,0:99:99:0,298,4134	0/0:112,0:112:99:0,337,4677	0/0:86,0:86:99:0,259,3591	0/0:87,0:87:99:0,262,3633	0/0:75,0:75:99:0,226,3132	0/0:5,0:5:15.05:0,15,209	0/0:6,0:6:18.06:0,18,251
gi|293339394|gb|GU595196.1|	76117	.	G	A	74.34	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.214;DP=1249;Dels=0.00;FS=46.201;HRun=0;HaplotypeScore=0.0555;InbreedingCoeff=0.7644;MQ=254.00;MQ0=0;MQRankSum=0.943;QD=24.78;ReadPosRankSum=-1.244;SB=2.20	GT:AD:DP:GQ:PL	0/0:91,0:91:99:0,274,3800	0/0:84,0:84:99:0,253,3508	./.	0/0:1,0:1:3.01:0,3,42	./.	./.	0/0:92,0:92:99:0,277,3842	0/0:75,0:75:99:0,226,3132	0/0:84,0:84:99:0,253,3508	0/0:68,0:68:99:0,205,2840	0/0:78,0:78:99:0,235,3257	0/0:86,0:86:99:0,259,3591	0/0:84,0:84:99:0,253,3508	0/0:75,0:75:99:0,226,3132	0/0:92,0:92:99:0,277,3842	0/0:94,0:94:99:0,283,3925	0/0:88,0:88:99:0,265,3675	0/0:76,0:76:99:0,229,3174	0/0:74,0:74:99:0,223,3090	1/1:0,3:3:9.03:125,9,0	0/0:4,0:4:12.04:0,12,167
gi|293339394|gb|GU595196.1|	76176	.	A	T	131.67	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.090;DP=1534;Dels=0.00;FS=2.236;HRun=0;HaplotypeScore=0.5262;InbreedingCoeff=0.8258;MQ=254.00;MQ0=0;MQRankSum=-0.080;QD=21.95;ReadPosRankSum=1.140;SB=35.31	GT:AD:DP:GQ:PL	0/0:104,0:105:99:0,313,4343	0/0:105,0:107:99:0,316,4385	./.	1/1:0,1:2:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	0/0:102,0:103:99:0,307,4260	0/0:90,0:90:99:0,271,3758	0/0:94,0:94:99:0,283,3925	0/0:117,0:117:99:0,352,4886	0/0:102,0:103:99:0,307,4260	0/0:102,0:104:99:0,307,4260	0/0:107,0:110:99:0,322,4468	0/0:104,0:105:99:0,313,4343	0/0:92,0:92:99:0,277,3842	0/0:90,0:90:99:0,271,3758	0/0:91,0:94:99:0,274,3800	0/0:103,0:106:99:0,310,4301	0/0:100,0:101:99:0,301,4176	./.	0/0:7,0:7:21.07:0,21,292
gi|293339394|gb|GU595196.1|	76178	.	A	C	219.57	.	AC=7;AF=0.175;AN=40;BaseQRankSum=-0.777;DP=1663;Dels=0.00;FS=4.180;HRun=0;HaplotypeScore=0.6499;InbreedingCoeff=0.7142;MQ=254.00;MQ0=0;MQRankSum=-0.628;QD=14.64;ReadPosRankSum=-0.586;SB=-110.00	GT:AD:DP:GQ:PL	0/0:117,0:117:99:0,352,4886	0/0:115,0:115:99:0,346,4802	./.	0/1:7,1:8:17.68:18,0,268	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	0/0:106,0:106:99:0,319,4427	0/0:92,0:92:99:0,277,3842	0/0:99,0:99:99:0,298,4134	0/0:120,0:120:99:0,361,5011	0/0:108,0:108:99:0,325,4510	0/0:115,0:115:99:0,346,4802	0/0:117,0:117:99:0,352,4886	0/0:111,0:111:99:0,334,4635	0/0:103,0:103:99:0,310,4301	0/0:103,0:103:99:0,310,4301	0/0:101,0:101:99:0,304,4218	0/0:119,0:119:99:0,358,4969	0/0:114,0:114:99:0,343,4761	1/1:0,3:3:9.03:125,9,0	0/0:8,0:8:24.08:0,24,334
gi|293339394|gb|GU595196.1|	76216	.	C	A,G	25724.72	.	AC=17,5;AF=0.425,0.125;AN=40;BaseQRankSum=0.485;DP=2037;Dels=0.00;FS=765.453;HaplotypeScore=0.0000;InbreedingCoeff=-0.2042;MQ=254.00;MQ0=0;MQRankSum=-0.709;QD=14.48;ReadPosRankSum=20.281;SB=-7076.53	GT:AD:DP:GQ:PL	0/1:86,36,0:122:99:1136,0,3224,1395,3333,4728	0/1:110,42,0:152:99:1296,0,4136,1628,4263,5890	./.	1/1:2,43,0:45:51.93:1712,52,0,1718,129,1796	2/2:0,0,24:24:72.24:1002,1002,1002,72,72,0	2/2:0,0,31:31:93.31:1295,1295,1295,93,93,0	0/1:88,46,0:134:99:1518,0,3272,1783,3410,5193	0/0:81,0,0:81:99:0,244,3383,244,3383,3383	0/0:88,0,0:88:99:0,265,3675,265,3675,3675	0/0:92,0,0:92:99:0,277,3842,277,3842,3842	0/1:82,48,0:130:99:1613,0,3033,1860,3178,5038	0/1:97,48,0:145:99:1568,0,3614,1860,3759,5619	0/1:97,54,0:151:99:1801,0,3596,2093,3759,5851	0/1:70,45,0:115:99:1533,0,2577,1744,2713,4456	0/1:84,56,0:140:99:1917,0,3086,2170,3255,5425	0/1:72,35,0:107:99:1140,0,2685,1356,2790,4146	0/1:73,51,0:124:99:1757,0,2675,1976,2829,4805	0/1:89,45,0:134:99:1476,0,3313,1744,3449,5193	0/1:90,51,0:141:99:1705,0,3334,1976,3488,5464	1/2:0,27,15:42:99:1628,581,500,1046,0,1001	1/1:0,39,0:39:99:1629,117,0,1629,117,1629
gi|293339394|gb|GU595196.1|	76222	.	G	A	2677.57	.	AC=5;AF=0.125;AN=40;BaseQRankSum=-1.005;DP=1923;Dels=0.00;FS=230.464;HRun=2;HaplotypeScore=6.9991;InbreedingCoeff=0.7714;MQ=254.00;MQ0=0;MQRankSum=0.129;QD=25.26;ReadPosRankSum=4.134;SB=-223.48	GT:AD:DP:GQ:PL	0/0:117,0:117:99:0,352,4886	0/0:134,0:134:99:0,403,5596	./.	0/0:47,0:47:99:0,141,1963	1/1:0,24:24:72.24:1002,72,0	1/1:0,31:31:93.31:1295,93,0	0/0:126,0:126:99:0,379,5262	0/0:73,0:73:99:0,220,3049	0/0:74,0:74:99:0,223,3090	0/0:89,0:89:99:0,268,3717	0/0:118,0:118:99:0,355,4928	0/0:138,0:138:99:0,415,5763	0/0:134,0:134:99:0,403,5596	0/0:110,0:110:99:0,331,4594	0/0:131,0:131:99:0,394,5471	0/0:103,0:103:99:0,310,4301	0/0:118,0:118:99:0,355,4928	0/0:127,0:127:99:0,382,5304	0/0:134,0:134:99:0,403,5596	0/1:36,15:51:99:473,0,1350	0/0:44,0:44:99:0,132,1837
gi|293339394|gb|GU595196.1|	76250	.	C	T	1461.56	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-1.143;DP=761;Dels=0.00;FS=143.541;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9695;MQ=254.00;MQ0=0;MQRankSum=0.146;QD=39.50;ReadPosRankSum=-2.457;SB=-416.21	GT:AD:DP:GQ:PL	0/0:39,0:39:99:0,117,1629	0/0:50,0:50:99:0,151,2088	./.	0/0:3,0:3:9.03:0,9,125	./.	./.	0/0:57,0:57:99:0,172,2380	0/0:33,0:33:99:0,99,1378	0/0:42,0:42:99:0,126,1754	0/0:38,0:38:99:0,114,1587	0/0:54,0:54:99:0,163,2255	0/0:72,0:72:99:0,217,3007	0/0:46,0:46:99:0,138,1921	0/0:42,0:42:99:0,126,1754	0/0:52,0:52:99:0,157,2172	0/0:43,0:43:99:0,129,1796	0/0:53,0:53:99:0,160,2213	0/0:51,0:51:99:0,154,2130	0/0:49,0:49:99:0,147,2046	1/1:0,18:18:54.18:752,54,0	1/1:0,19:19:57.19:793,57,0
gi|293339394|gb|GU595196.1|	76255	.	T	C	585.48	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.069;DP=679;Dels=0.00;FS=80.124;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9667;MQ=254.00;MQ0=0;MQRankSum=1.168;QD=36.59;ReadPosRankSum=1.358;SB=-81.97	GT:AD:DP:GQ:PL	0/0:31,0:31:93.31:0,93,1295	0/0:47,0:47:99:0,141,1963	./.	0/0:3,0:3:9.03:0,9,125	./.	./.	0/0:47,0:47:99:0,141,1963	0/0:35,0:35:99:0,105,1462	0/0:39,0:39:99:0,117,1629	0/0:34,0:34:99:0,102,1420	0/0:47,0:47:99:0,141,1963	0/0:71,0:71:99:0,214,2965	0/0:40,0:40:99:0,120,1670	0/0:40,0:40:99:0,120,1670	0/0:48,0:48:99:0,144,2004	0/0:43,0:43:99:0,129,1796	0/0:47,0:47:99:0,141,1963	0/0:49,0:49:99:0,147,2046	0/0:42,0:42:99:0,126,1754	1/1:0,9:9:27.09:376,27,0	1/1:0,7:7:21.07:292,21,0
gi|293339394|gb|GU595196.1|	76327	.	T	C	53.17	.	AC=6;AF=0.167;AN=36;BaseQRankSum=-1.419;DP=280;Dels=0.00;FS=18.016;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.7676;MQ=254.00;MQ0=0;MQRankSum=-0.366;QD=17.72;ReadPosRankSum=-2.889;SB=1.20	GT:AD:DP:GQ:PL	0/0:13,0:13:39.13:0,39,543	0/0:17,0:17:51.17:0,51,710	./.	./.	./.	1/1:0,1:1:3.01:42,3,0	0/0:15,0:15:45.15:0,45,626	0/0:19,0:19:57.19:0,57,793	0/0:17,0:17:51.17:0,51,710	0/0:21,0:21:63.21:0,63,877	0/0:20,0:20:60.20:0,60,835	0/0:24,0:24:72.24:0,72,1002	0/0:28,0:28:84.28:0,84,1169	0/0:11,0:11:33.11:0,33,459	0/0:21,0:21:63.21:0,63,877	0/0:15,0:15:45.15:0,45,626	0/0:19,0:19:57.19:0,57,793	0/0:23,0:23:69.23:0,69,960	0/0:14,0:14:42.14:0,42,585	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0
gi|293339394|gb|GU595196.1|	76329	.	C	T	86.12	.	AC=9;AF=0.237;AN=38;BaseQRankSum=0.844;DP=270;Dels=0.00;FS=30.108;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.6646;MQ=254.00;MQ0=0;MQRankSum=-0.012;QD=5.07;ReadPosRankSum=-2.555;SB=-2.29	GT:AD:DP:GQ:PL	0/0:14,0:14:42.14:0,42,585	0/0:17,0:17:51.17:0,51,710	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	0/0:13,0:13:39.13:0,39,543	0/0:20,0:20:60.20:0,60,835	0/0:17,0:17:51.17:0,51,710	0/0:19,0:19:57.19:0,57,793	0/0:20,0:20:60.20:0,60,835	0/0:21,0:21:63.21:0,63,877	0/0:26,0:26:78.26:0,78,1086	0/1:12,1:13:2.63:3,0,462	0/0:19,0:19:57.19:0,57,793	0/0:12,0:12:36.12:0,36,501	0/0:18,0:18:54.18:0,54,752	0/0:22,0:22:66.22:0,66,919	0/0:15,0:15:45.15:0,45,626	1/1:0,1:1:3.01:42,3,0	./.
gi|293339394|gb|GU595196.1|	76439	.	C	T	2737.12	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.075;DP=1183;Dels=0.00;FS=19.571;HRun=0;HaplotypeScore=3.5233;InbreedingCoeff=0.9814;MQ=254.00;MQ0=0;MQRankSum=0.202;QD=35.55;ReadPosRankSum=0.776;SB=-334.68	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2380	0/0:71,0:71:99:0,214,2965	0/0:5,0:5:15.05:0,15,209	0/0:20,0:20:60.20:0,60,835	0/0:11,0:11:33.11:0,33,459	0/0:17,0:17:51.17:0,51,710	1/1:5,72:77:22.97:2798,23,0	0/0:65,0:65:99:0,196,2714	0/0:66,0:66:99:0,199,2756	0/0:56,0:56:99:0,169,2339	0/0:61,0:61:99:0,184,2547	0/0:67,0:67:99:0,202,2798	0/0:80,0:80:99:0,241,3341	0/0:74,0:74:99:0,223,3090	0/0:86,0:86:99:0,259,3591	0/0:89,0:89:99:0,268,3717	0/0:73,0:73:99:0,220,3049	0/0:76,0:76:99:0,229,3174	0/0:82,0:82:99:0,247,3424	0/0:26,0:26:78.26:0,78,1086	0/0:24,0:24:72.24:0,72,1002
gi|293339394|gb|GU595196.1|	76442	.	G	A	4009.01	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.409;DP=1162;Dels=0.00;FS=293.682;HRun=0;HaplotypeScore=3.3805;InbreedingCoeff=0.9964;MQ=254.00;MQ0=0;MQRankSum=-0.065;QD=41.76;ReadPosRankSum=2.305;SB=-1031.07	GT:AD:DP:GQ:PL	0/0:57,0:57:99:0,172,2380	0/0:68,0:68:99:0,205,2840	1/1:0,5:5:15.05:209,15,0	1/1:0,17:17:51.17:710,51,0	1/1:0,11:11:33.11:459,33,0	1/1:0,16:16:48.16:668,48,0	0/0:83,0:83:99:0,250,3466	0/0:64,0:64:99:0,193,2673	0/0:61,0:61:99:0,184,2547	0/0:54,0:54:99:0,163,2255	0/0:63,0:63:99:0,190,2631	0/0:66,0:66:99:0,199,2756	0/0:82,0:82:99:0,247,3424	0/0:72,0:72:99:0,217,3007	0/0:83,0:83:99:0,250,3466	0/0:89,0:89:99:0,268,3717	0/0:72,0:72:99:0,217,3007	0/0:76,0:76:99:0,229,3174	0/0:76,0:76:99:0,229,3174	1/1:0,24:24:72.24:1002,72,0	1/1:0,23:23:69.23:960,69,0
gi|293339394|gb|GU595196.1|	76491	.	G	A	2208.16	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.519;DP=1356;Dels=0.00;FS=14.979;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9715;MQ=254.00;MQ0=0;MQRankSum=2.416;QD=39.43;ReadPosRankSum=-4.785;SB=-404.02	GT:AD:DP:GQ:PL	0/0:88,0:88:99:0,265,3675	0/0:93,0:93:99:0,280,3884	1/1:0,7:7:21.07:292,21,0	1/1:0,22:22:66.22:919,66,0	0/0:2,0:2:6.02:0,6,84	1/1:0,8:8:24.08:334,24,0	0/0:93,0:93:99:0,280,3884	0/0:78,0:78:99:0,235,3257	0/0:84,0:84:99:0,253,3508	0/0:88,0:88:99:0,265,3675	0/0:92,0:92:99:0,277,3842	0/0:79,0:79:99:0,238,3299	0/0:88,0:88:99:0,265,3675	0/0:83,0:83:99:0,250,3466	0/0:91,0:91:99:0,274,3800	0/0:88,0:88:99:0,265,3675	0/0:86,0:86:99:0,259,3591	0/0:91,0:91:99:0,274,3800	0/0:76,0:76:99:0,229,3174	1/1:0,12:12:36.12:501,36,0	1/1:0,7:7:21.07:292,21,0
gi|293339394|gb|GU595196.1|	76535	.	T	C	9187.29	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.039;DP=1770;Dels=0.00;FS=158.760;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9604;MQ=254.00;MQ0=0;MQRankSum=-0.193;QD=41.76;ReadPosRankSum=-0.758;SB=-119.17	GT:AD:DP:GQ:PL	0/0:92,0:92:99:0,277,3842	0/0:108,0:108:99:0,325,4510	1/1:0,44:44:99:1837,132,0	1/1:0,71:71:99:2965,214,0	1/1:0,38:38:99:1587,114,0	1/1:0,36:36:99:1503,108,0	0/0:109,0:109:99:0,328,4552	0/0:125,0:125:99:0,376,5220	0/0:92,0:92:99:0,277,3842	0/0:100,0:100:99:0,301,4176	0/0:106,0:106:99:0,319,4427	0/0:110,0:110:99:0,331,4594	0/0:106,0:106:99:0,319,4427	0/0:90,1:91:99:0,232,3717	0/0:110,0:110:99:0,331,4594	0/0:105,0:105:99:0,316,4385	0/0:103,0:103:99:0,310,4301	0/0:91,0:91:99:0,274,3800	0/0:102,0:102:99:0,307,4260	1/1:0,30:30:90.30:1253,90,0	1/1:0,1:1:3.01:42,3,0
gi|293339394|gb|GU595196.1|	76553	.	T	C	7516.88	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.377;DP=1655;Dels=0.00;FS=104.376;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.400;QD=41.76;ReadPosRankSum=2.824;SB=-0.02	GT:AD:DP:GQ:PL	0/0:83,0:83:99:0,250,3466	0/0:102,0:102:99:0,307,4260	1/1:0,50:50:99:2088,151,0	1/1:0,56:56:99:2339,169,0	1/1:0,39:39:99:1629,117,0	1/1:0,35:35:99:1462,105,0	0/0:92,0:92:99:0,277,3842	0/0:113,0:113:99:0,340,4719	0/0:88,0:88:99:0,265,3675	0/0:94,0:94:99:0,283,3925	0/0:100,0:100:99:0,301,4176	0/0:93,0:93:99:0,280,3884	0/0:101,0:101:99:0,304,4218	0/0:84,0:84:99:0,253,3508	0/0:105,0:105:99:0,316,4385	0/0:99,0:99:99:0,298,4134	0/0:101,0:101:99:0,304,4218	0/0:88,0:88:99:0,265,3675	0/0:102,0:102:99:0,307,4260	0/0:30,0:30:90.30:0,90,1253	./.
gi|293339394|gb|GU595196.1|	76590	.	C	A	150.10	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-1.354;DP=2307;Dels=0.00;FS=18.838;HRun=1;HaplotypeScore=0.3000;InbreedingCoeff=-0.1202;MQ=254.00;MQ0=0;MQRankSum=0.103;QD=4.06;ReadPosRankSum=-4.981;SB=-0.02	GT:AD:DP:GQ:PL	0/0:138,0:138:99:0,415,5763	0/0:161,0:161:99:0,485,6723	0/0:14,1:15:3.39:0,3,543	0/1:10,4:14:99:125,0,375	0/1:7,2:9:56.43:56,0,265	0/1:5,1:6:23.70:24,0,191	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:144,0:144:99:0,433,6013	0/0:137,0:137:99:0,412,5721	0/0:139,0:139:99:0,418,5805	0/0:155,0:155:99:0,467,6473	0/0:130,0:130:99:0,391,5429	0/0:149,0:149:99:0,448,6222	0/0:153,0:153:99:0,461,6389	0/0:151,0:151:99:0,455,6306	0/0:150,0:150:99:0,452,6264	0/0:144,0:144:99:0,433,6013	0/1:7,1:8:17.68:18,0,268	./.
gi|293339394|gb|GU595196.1|	76591	.	A	G	395.89	.	AC=5;AF=0.125;AN=40;BaseQRankSum=-0.563;DP=2297;Dels=0.00;FS=34.282;HRun=4;HaplotypeScore=0.3000;InbreedingCoeff=-0.1427;MQ=254.00;MQ0=0;MQRankSum=-0.488;QD=7.92;ReadPosRankSum=-6.208;SB=-0.02	GT:AD:DP:GQ:PL	0/0:137,0:137:99:0,412,5721	0/0:159,0:159:99:0,479,6640	0/1:12,5:17:99:158,0,450	0/1:8,4:12:99:131,0,298	0/1:5,3:8:99:101,0,185	0/1:5,2:7:62.45:62,0,188	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:142,0:142:99:0,427,5930	0/0:138,0:138:99:0,415,5763	0/0:138,0:138:99:0,415,5763	0/0:157,0:157:99:0,473,6556	0/0:131,0:131:99:0,394,5471	0/0:149,0:149:99:0,448,6222	0/0:154,0:154:99:0,464,6431	0/0:150,0:150:99:0,452,6264	0/0:147,0:147:99:0,442,6139	0/0:142,0:142:99:0,427,5930	0/1:5,1:6:23.70:24,0,191	./.
gi|293339394|gb|GU595196.1|	76596	.	C	G	30.11	.	AC=3;AF=0.075;AN=40;BaseQRankSum=-0.289;DP=2288;Dels=0.00;FS=10.914;HRun=4;HaplotypeScore=0.3000;InbreedingCoeff=-0.0950;MQ=254.00;MQ0=0;MQRankSum=0.337;QD=1.25;ReadPosRankSum=-3.732;SB=-0.02	GT:AD:DP:GQ:PL	0/0:135,0:135:99:0,406,5638	0/0:160,0:160:99:0,482,6682	0/1:11,2:13:44.39:44,0,420	0/0:13,1:14:0.38:0,0,501	0/1:6,1:7:20.69:21,0,229	0/0:10,0:10:30.10:0,30,418	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:143,0:143:99:0,430,5972	0/0:137,0:137:99:0,412,5721	0/0:145,0:145:99:0,436,6055	0/0:162,0:162:99:0,488,6765	0/0:128,0:128:99:0,385,5345	0/0:147,0:147:99:0,442,6139	0/0:153,0:153:99:0,461,6389	0/0:148,0:148:99:0,445,6181	0/0:142,0:142:99:0,427,5930	0/0:137,0:137:99:0,412,5721	0/1:3,1:4:29.72:30,0,113	./.
gi|293339394|gb|GU595196.1|	76605	.	C	A	191.80	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.013;DP=2298;Dels=0.00;FS=10.485;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9918;MQ=254.00;MQ0=0;MQRankSum=-0.198;QD=31.97;ReadPosRankSum=-4.184;SB=-0.02	GT:AD:DP:GQ:PL	0/0:133,0:133:99:0,400,5554	0/0:143,0:143:99:0,430,5972	0/0:21,0:21:63.21:0,63,877	0/0:28,0:28:84.28:0,84,1169	0/0:25,0:25:75.25:0,75,1044	0/0:18,0:18:54.18:0,54,752	0/0:157,0:157:99:0,473,6556	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:133,0:133:99:0,400,5554	0/0:128,0:128:99:0,385,5345	0/0:138,0:138:99:0,415,5763	0/0:157,0:157:99:0,473,6556	0/0:138,0:138:99:0,415,5763	0/0:153,0:153:99:0,461,6389	0/0:148,0:148:99:0,445,6181	0/0:145,0:145:99:0,436,6055	0/0:146,0:146:99:0,439,6097	0/0:142,0:142:99:0,427,5930	0/0:14,0:14:42.14:0,42,585	1/1:0,6:6:18.06:251,18,0
gi|293339394|gb|GU595196.1|	76606	.	A	C	314.15	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.236;DP=2295;Dels=0.00;FS=15.092;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9990;MQ=254.00;MQ0=0;MQRankSum=-1.529;QD=34.91;ReadPosRankSum=-4.716;SB=-0.02	GT:AD:DP:GQ:PL	0/0:133,0:133:99:0,400,5554	0/0:146,0:146:99:0,439,6097	0/0:22,0:22:66.22:0,66,919	0/0:29,0:29:87.29:0,87,1211	0/0:25,0:25:75.25:0,75,1044	0/0:19,0:19:57.19:0,57,793	0/0:156,0:156:99:0,470,6515	0/0:158,0:158:99:0,476,6598	0/0:159,0:159:99:0,479,6640	0/0:134,0:134:99:0,403,5596	0/0:127,0:127:99:0,382,5304	0/0:139,0:139:99:0,418,5805	0/0:157,0:157:99:0,473,6556	0/0:140,0:140:99:0,421,5846	0/0:155,0:155:99:0,467,6473	0/0:147,0:147:99:0,442,6139	0/0:139,0:139:99:0,418,5805	0/0:143,0:143:99:0,430,5972	0/0:142,0:142:99:0,427,5930	0/0:16,0:16:48.16:0,48,668	1/1:0,9:9:27.09:376,27,0
gi|293339394|gb|GU595196.1|	76660	.	T	A	2615.40	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-1.130;DP=2467;Dels=0.00;FS=54.286;HRun=6;HaplotypeScore=0.0000;InbreedingCoeff=0.9979;MQ=254.00;MQ0=0;MQRankSum=-0.000;QD=39.63;ReadPosRankSum=-10.100;SB=-500.94	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:163,0:163:99:0,491,6807	1/1:0,12:12:36.12:501,36,0	1/1:0,16:16:48.16:668,48,0	1/1:0,12:12:36.12:501,36,0	1/1:0,6:6:18.06:251,18,0	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:159,0:159:99:0,479,6640	0/0:167,0:167:99:0,503,6974	0/0:157,0:157:99:0,473,6556	0/0:153,0:153:99:0,461,6389	0/0:175,0:175:99:0,527,7308	0/0:143,0:143:99:0,430,5972	0/0:198,0:198:99:0,596,8269	0/0:132,0:132:99:0,397,5512	0/0:141,0:141:99:0,424,5888	0/0:137,0:137:99:0,412,5721	1/1:0,10:10:30.10:418,30,0	1/1:0,10:10:30.10:418,30,0
gi|293339394|gb|GU595196.1|	76666	.	A	T	875.20	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.924;DP=2553;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=2.2854;InbreedingCoeff=0.9155;MQ=254.00;MQ0=0;MQRankSum=0.791;QD=36.47;ReadPosRankSum=-7.992;SB=-474.89	GT:AD:DP:GQ:PL	0/0:190,0:190:99:0,572,7934	0/0:166,0:166:99:0,500,6932	1/1:0,6:6:18.06:251,18,0	1/1:0,5:5:15.05:209,15,0	1/1:0,7:7:21.07:292,21,0	1/1:0,1:1:3.01:42,3,0	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:151,0:151:99:0,455,6306	0/0:183,0:183:99:0,551,7642	0/0:151,0:151:99:0,455,6306	0/0:209,0:209:99:0,629,8728	0/0:148,0:148:99:0,445,6181	0/0:150,0:150:99:0,452,6264	0/0:155,0:155:99:0,467,6473	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0
gi|293339394|gb|GU595196.1|	76672	.	A	G	7182.80	.	AC=2;AF=0.067;AN=30;BaseQRankSum=0.595;DP=2524;Dels=0.00;FS=2.362;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.042;QD=41.76;ReadPosRankSum=-0.541;SB=-3424.37	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	./.	./.	./.	./.	0/0:179,0:179:99:0,539,7475	1/1:0,172:172:99:7183,518,0	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:150,0:150:99:0,452,6264	0/0:183,0:183:99:0,551,7642	0/0:149,0:149:99:0,448,6222	0/0:200,0:200:99:0,602,8352	0/0:159,0:159:99:0,479,6640	0/0:155,0:155:99:0,467,6473	0/0:163,0:163:99:0,491,6807	./.	./.
gi|293339394|gb|GU595196.1|	76688	.	A	T	4217.81	.	AC=12;AF=0.286;AN=42;BaseQRankSum=1.754;DP=2662;Dels=0.00;FS=31.317;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-0.731;QD=41.76;ReadPosRankSum=-9.826;SB=-1376.82	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	1/1:0,14:14:42.14:585,42,0	1/1:0,20:20:60.20:835,60,0	1/1:0,8:8:24.08:334,24,0	1/1:0,20:20:60.20:835,60,0	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:164,0:164:99:0,494,6849	0/0:190,0:190:99:0,572,7934	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	0/0:186,0:186:99:0,560,7767	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	0/0:152,0:152:99:0,458,6348	1/1:0,20:20:60.20:835,60,0	1/1:0,19:19:57.19:793,57,0
gi|293339394|gb|GU595196.1|	76691	.	A	T	5554.14	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.494;DP=2703;Dels=0.00;FS=45.988;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.934;QD=41.76;ReadPosRankSum=-8.981;SB=-1753.85	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	1/1:0,20:20:60.20:835,60,0	1/1:0,26:26:78.26:1086,78,0	1/1:0,13:13:39.13:543,39,0	1/1:0,26:26:78.26:1086,78,0	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:195,0:195:99:0,587,8143	0/0:175,0:175:99:0,527,7308	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:182,0:182:99:0,548,7600	0/0:185,0:185:99:0,557,7726	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:154,0:154:99:0,464,6431	1/1:0,27:27:81.27:1128,81,0	1/1:0,21:21:63.21:877,63,0
gi|293339394|gb|GU595196.1|	76739	.	A	G	3111.44	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.620;DP=3172;Dels=0.00;FS=28.217;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.388;QD=40.94;ReadPosRankSum=-1.451;SB=-876.99	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:164,0:164:99:0,494,6849	0/0:93,0:93:99:0,280,3884	0/0:168,0:168:99:0,506,7016	0/0:85,0:85:99:0,256,3550	0/0:98,0:98:99:0,295,4093	0/0:153,0:153:99:0,461,6389	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:188,0:188:99:0,566,7851	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	1/1:0,76:76:99:3174,229,0	0/0:107,0:107:99:0,322,4468
gi|293339394|gb|GU595196.1|	76763	.	A	G	9855.46	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.029;DP=3159;Dels=0.00;FS=68.265;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.095;QD=41.76;ReadPosRankSum=1.322;SB=-3048.52	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:97,0:97:99:0,292,4051	0/0:153,0:153:99:0,461,6389	1/1:0,77:77:99:3216,232,0	1/1:0,84:84:99:3508,253,0	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:159,0:159:99:0,479,6640	0/0:171,0:171:99:0,515,7141	0/0:151,0:151:99:0,455,6306	0/0:190,0:190:99:0,572,7934	0/0:165,0:165:99:0,497,6890	0/0:183,0:183:99:0,551,7642	0/0:181,0:181:99:0,545,7559	0/0:180,0:180:99:0,542,7517	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	1/1:0,75:75:99:3132,226,0	0/0:109,0:109:99:0,328,4552
gi|293339394|gb|GU595196.1|	77126	.	G	T	12486.36	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.286;DP=3336;Dels=0.00;FS=0.675;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.142;QD=41.76;ReadPosRankSum=-2.792;SB=-6138.79	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	1/1:0,138:138:99:5763,415,0	1/1:0,161:161:99:6723,485,0	0/0:81,0:81:99:0,244,3383	0/0:123,0:123:99:0,370,5137	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	0/0:182,0:182:99:0,548,7600	0/0:170,0:170:99:0,512,7099	0/0:186,0:186:99:0,560,7767	0/0:155,0:155:99:0,467,6473	0/0:168,0:168:99:0,506,7016	0/0:157,0:157:99:0,473,6556	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:184,0:184:99:0,554,7684	0/0:188,0:188:99:0,566,7851	0/0:93,0:93:99:0,280,3884	0/0:169,0:169:99:0,509,7057
gi|293339394|gb|GU595196.1|	77157	.	C	T	15117.26	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.873;DP=3289;Dels=0.00;FS=0.197;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.437;QD=41.76;ReadPosRankSum=-0.357;SB=-7516.88	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:136,0:136:99:0,409,5679	0/0:164,0:164:99:0,494,6849	1/1:0,88:88:99:3675,265,0	1/1:0,111:111:99:4635,334,0	0/0:169,0:169:99:0,509,7057	1/1:0,163:163:99:6807,491,0	0/0:164,0:164:99:0,494,6849	0/0:184,0:184:99:0,554,7684	0/0:155,0:155:99:0,467,6473	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:169,0:169:99:0,509,7057	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	0/0:175,0:175:99:0,527,7308	0/0:92,0:92:99:0,277,3842	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	77208	.	G	A	20044.98	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.026;DP=3325;Dels=0.00;FS=0.356;HRun=0;HaplotypeScore=4.3804;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.106;QD=41.76;ReadPosRankSum=-0.448;SB=-9897.22	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:163,0:163:99:0,491,6807	0/0:122,0:122:99:0,367,5095	0/0:180,0:180:99:0,542,7517	1/1:0,97:97:99:4051,292,0	1/1:0,118:118:99:4928,355,0	0/0:183,0:183:99:0,551,7642	1/1:0,170:170:99:7099,512,0	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:139,0:139:99:0,418,5805	0/0:178,0:178:99:0,536,7433	0/0:184,0:184:99:0,554,7684	0/0:165,0:165:99:0,497,6890	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:182,0:182:99:0,548,7600	0/0:181,0:181:99:0,545,7559	1/1:0,95:95:99:3967,286,0	0/0:184,0:184:99:0,554,7684
gi|293339394|gb|GU595196.1|	77210	.	C	A	4050.77	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.044;DP=3329;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=4.6184;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.322;QD=41.76;ReadPosRankSum=-0.813;SB=-1962.75	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:127,0:127:99:0,382,5304	0/0:178,0:178:99:0,536,7433	0/0:93,0:93:99:0,280,3884	0/0:121,0:121:99:0,364,5053	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:147,0:147:99:0,442,6139	0/0:183,0:183:99:0,551,7642	0/0:185,0:185:99:0,557,7726	0/0:162,0:162:99:0,488,6765	0/0:155,0:155:99:0,467,6473	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:174,0:174:99:0,524,7266	0/0:181,0:181:99:0,545,7559	1/1:0,97:97:99:4051,292,0	0/0:181,0:181:99:0,545,7559
gi|293339394|gb|GU595196.1|	77229	.	C	A	4593.66	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.420;DP=3356;Dels=0.00;FS=1.560;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.837;QD=41.76;ReadPosRankSum=1.675;SB=-2129.80	GT:AD:DP:GQ:PL	0/0:145,0:145:99:0,436,6055	0/0:173,0:173:99:0,521,7225	0/0:132,0:132:99:0,397,5512	0/0:174,0:174:99:0,524,7266	0/0:102,0:102:99:0,307,4260	1/1:0,110:110:99:4594,331,0	0/0:182,0:182:99:0,548,7600	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	0/0:158,0:158:99:0,476,6598	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:196,0:196:99:0,590,8185	0/0:103,0:103:99:0,310,4301	0/0:171,0:171:99:0,515,7141
gi|293339394|gb|GU595196.1|	77334	.	G	T	15618.38	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.042;DP=3197;Dels=0.00;FS=4.216;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.643;QD=41.76;ReadPosRankSum=0.398;SB=-7433.36	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:113,0:113:99:0,340,4719	0/0:165,0:165:99:0,497,6890	1/1:0,91:91:99:3800,274,0	1/1:0,98:98:99:4093,295,0	0/0:166,0:166:99:0,500,6932	1/1:0,185:185:99:7726,557,0	0/0:147,0:147:99:0,442,6139	0/0:157,0:157:99:0,473,6556	0/0:145,0:145:99:0,436,6055	0/0:191,0:191:99:0,575,7976	0/0:149,0:149:99:0,448,6222	0/0:157,0:157:99:0,473,6556	0/0:133,0:133:99:0,400,5554	0/0:191,0:191:99:0,575,7976	0/0:160,0:160:99:0,482,6682	0/0:154,0:154:99:0,464,6431	0/0:185,0:185:99:0,557,7726	0/0:74,0:74:99:0,223,3090	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	77444	.	C	T	19919.70	.	AC=8;AF=0.190;AN=42;BaseQRankSum=1.096;DP=3397;Dels=0.00;FS=5.917;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.410;QD=41.76;ReadPosRankSum=1.147;SB=-9646.66	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:181,0:181:99:0,545,7559	0/0:131,0:131:99:0,394,5471	0/0:148,0:148:99:0,445,6181	1/1:0,83:83:99:3466,250,0	1/1:0,122:122:99:5095,367,0	0/0:185,0:185:99:0,557,7726	1/1:0,172:172:99:7183,518,0	0/0:181,0:181:99:0,545,7559	0/0:160,0:160:99:0,482,6682	0/0:143,0:143:99:0,430,5972	0/0:180,0:180:99:0,542,7517	0/0:155,0:155:99:0,467,6473	0/0:175,0:175:99:0,527,7308	0/0:160,0:160:99:0,482,6682	0/0:177,0:177:99:0,533,7392	0/0:189,0:189:99:0,569,7893	0/0:185,0:185:99:0,557,7726	0/0:177,0:177:99:0,533,7392	1/1:0,100:100:99:4176,301,0	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	77456	.	T	C	21339.55	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.534;DP=3415;Dels=0.00;FS=8.632;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.067;QD=41.76;ReadPosRankSum=0.112;SB=-10147.78	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:180,0:180:99:0,542,7517	0/0:120,0:120:99:0,361,5011	0/0:155,0:155:99:0,467,6473	1/1:0,86:86:99:3591,259,0	1/1:0,143:143:99:5972,430,0	0/0:171,0:171:99:0,515,7141	1/1:0,177:177:99:7392,533,0	0/0:191,0:191:99:0,575,7976	0/0:171,0:171:99:0,515,7141	0/0:152,0:152:99:0,458,6348	0/0:180,0:180:99:0,542,7517	0/0:148,0:148:99:0,445,6181	0/0:183,0:183:99:0,551,7642	0/0:150,0:150:99:0,452,6264	0/0:170,0:170:99:0,512,7099	0/0:195,0:195:99:0,587,8143	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	1/1:0,105:105:99:4385,316,0	0/0:213,0:213:99:0,641,8895
gi|293339394|gb|GU595196.1|	77495	.	C	T	4009.01	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.185;DP=3442;Dels=0.00;FS=1.211;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.337;QD=41.76;ReadPosRankSum=-0.920;SB=-1962.75	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:177,0:177:99:0,533,7392	0/0:125,0:125:99:0,376,5220	0/0:191,0:191:99:0,575,7976	0/0:97,0:97:99:0,292,4051	0/0:108,0:108:99:0,325,4510	0/0:164,0:164:99:0,494,6849	0/0:181,0:181:99:0,545,7559	0/0:184,0:184:99:0,554,7684	0/0:177,0:177:99:0,533,7392	0/0:184,0:184:99:0,554,7684	0/0:180,0:180:99:0,542,7517	0/0:185,0:185:99:0,557,7726	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	1/1:0,96:96:99:4009,289,0	0/0:224,0:224:99:0,674,9354
gi|293339394|gb|GU595196.1|	77713	.	G	A	4301.33	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.868;DP=3465;Dels=0.00;FS=0.360;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.018;QD=41.76;ReadPosRankSum=-0.323;SB=-2129.80	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:195,0:195:99:0,587,8143	0/0:134,0:134:99:0,403,5596	0/0:192,0:192:99:0,578,8018	0/0:96,0:96:99:0,289,4009	0/0:100,0:100:99:0,301,4176	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	0/0:187,0:187:99:0,563,7809	0/0:169,0:169:99:0,509,7057	0/0:188,0:188:99:0,566,7851	0/0:168,0:168:99:0,506,7016	0/0:174,0:174:99:0,524,7266	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	0/0:177,0:177:99:0,533,7392	0/0:146,0:146:99:0,439,6097	0/0:204,0:204:99:0,614,8519	0/0:163,0:163:99:0,491,6807	1/1:0,103:103:99:4301,310,0	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	77781	.	A	C	5595.90	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.554;DP=3149;Dels=0.00;FS=2.702;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.767;QD=41.76;ReadPosRankSum=-0.284;SB=-2630.92	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	1/1:0,41:41:99:1712,123,0	1/1:0,93:93:99:3884,280,0	0/0:86,0:86:99:0,259,3591	0/0:110,0:110:99:0,331,4594	0/0:177,0:177:99:0,533,7392	0/0:157,0:157:99:0,473,6556	0/0:174,0:174:99:0,524,7266	0/0:183,0:183:99:0,551,7642	0/0:172,0:172:99:0,518,7183	0/0:187,0:187:99:0,563,7809	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:156,0:156:99:0,470,6515	0/0:183,0:183:99:0,551,7642	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:102,0:102:99:0,307,4260	0/0:200,0:200:99:0,602,8352
gi|293339394|gb|GU595196.1|	77785	.	C	T	5387.10	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.799;DP=3154;Dels=0.00;FS=4.912;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.039;QD=41.76;ReadPosRankSum=-4.578;SB=-2422.12	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	1/1:0,41:41:99:1712,123,0	1/1:0,88:88:99:3675,265,0	0/0:87,0:87:99:0,262,3633	0/0:105,0:105:99:0,316,4385	0/0:164,0:164:99:0,494,6849	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:183,0:183:99:0,551,7642	0/0:164,0:164:99:0,494,6849	0/0:187,0:187:99:0,563,7809	0/0:172,0:172:99:0,518,7183	0/0:165,0:165:99:0,497,6890	0/0:158,0:158:99:0,476,6598	0/0:190,0:190:99:0,572,7934	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	0/0:98,0:98:99:0,295,4093	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	77797	.	C	T	3841.97	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.447;DP=3147;Dels=0.00;FS=8.602;HRun=0;HaplotypeScore=4.2851;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.591;QD=41.76;ReadPosRankSum=0.938;SB=-1670.43	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:54,0:54:99:0,163,2255	0/0:80,0:80:99:0,241,3341	0/0:90,0:90:99:0,271,3758	0/0:89,0:89:99:0,268,3717	0/0:175,0:175:99:0,527,7308	0/0:157,0:157:99:0,473,6556	0/0:167,0:167:99:0,503,6974	0/0:187,0:187:99:0,563,7809	0/0:154,0:154:99:0,464,6431	0/0:186,0:186:99:0,560,7767	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:193,0:193:99:0,581,8060	0/0:157,0:157:99:0,473,6556	0/0:162,0:162:99:0,488,6765	0/0:156,0:156:99:0,470,6515	1/1:0,92:92:99:3842,277,0	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	77806	.	C	T	5637.66	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.722;DP=3151;Dels=0.00;FS=1.801;HRun=0;HaplotypeScore=3.3329;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.086;QD=41.76;ReadPosRankSum=-0.093;SB=-2797.96	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:185,0:185:99:0,557,7726	1/1:0,60:60:99:2506,181,0	1/1:0,75:75:99:3132,226,0	0/0:87,0:87:99:0,262,3633	0/0:83,0:83:99:0,250,3466	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	0/0:186,0:186:99:0,560,7767	0/0:170,0:170:99:0,512,7099	0/0:178,0:178:99:0,536,7433	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	0/0:86,0:86:99:0,259,3591	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	77868	.	A	G	3027.92	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.034;DP=3321;Dels=0.00;FS=1.943;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.344;QD=40.92;ReadPosRankSum=-0.908;SB=-1378.11	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:180,0:180:99:0,542,7517	0/0:142,0:142:99:0,427,5930	0/0:170,0:170:99:0,512,7099	0/0:114,0:114:99:0,343,4761	0/0:104,0:104:99:0,313,4343	0/0:183,0:183:99:0,551,7642	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:140,0:140:99:0,421,5846	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:189,0:189:99:0,569,7893	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	1/1:0,74:74:99:3090,223,0	0/0:167,0:167:99:0,503,6974
gi|293339394|gb|GU595196.1|	77904	.	T	C	31612.59	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-1.273;DP=3312;Dels=0.00;FS=6.080;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.239;QD=41.76;ReadPosRankSum=-0.867;SB=-15576.62	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	1/1:0,119:119:99:4969,358,0	1/1:0,155:155:99:6473,467,0	1/1:0,93:93:99:3884,280,0	1/1:0,107:107:99:4468,322,0	0/0:162,0:162:99:0,488,6765	1/1:0,195:195:99:8143,587,0	0/0:194,0:194:99:0,584,8102	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:138,0:138:99:0,415,5763	0/0:154,0:154:99:0,464,6431	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:199,0:199:99:0,599,8310	0/0:186,0:186:99:0,560,7767	0/0:174,0:174:99:0,524,7266	1/1:0,88:88:99:3675,265,0	0/0:171,0:171:99:0,515,7141
gi|293339394|gb|GU595196.1|	78207	.	C	G	5804.71	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.152;DP=3272;Dels=0.00;FS=1.373;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.067;QD=41.76;ReadPosRankSum=-1.233;SB=-2756.20	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	1/1:0,139:139:99:5805,418,0	0/0:162,0:162:99:0,488,6765	0/0:82,0:82:99:0,247,3424	0/0:107,0:107:99:0,322,4468	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:183,0:183:99:0,551,7642	0/0:156,0:156:99:0,470,6515	0/0:155,0:155:99:0,467,6473	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:182,0:182:99:0,548,7600	0/0:135,0:135:99:0,406,5638	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:88,0:88:99:0,265,3675	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	78235	.	C	A	14699.66	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.226;DP=3253;Dels=0.00;FS=3.670;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.991;QD=41.76;ReadPosRankSum=-0.721;SB=-7099.28	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	0/0:119,0:119:99:0,358,4969	0/0:161,0:161:99:0,485,6723	1/1:0,76:76:99:3174,229,0	1/1:0,108:108:99:4510,325,0	0/0:180,0:180:99:0,542,7517	1/1:0,168:168:99:7016,506,0	0/0:188,0:188:99:0,566,7851	0/0:175,0:175:99:0,527,7308	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	0/0:155,0:155:99:0,467,6473	0/0:179,0:179:99:0,539,7475	0/0:138,0:138:99:0,415,5763	0/0:181,0:181:99:0,545,7559	0/0:144,0:144:99:0,433,6013	0/0:156,0:156:99:0,470,6515	0/0:178,0:178:99:0,536,7433	0/0:86,0:86:99:0,259,3591	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	78258	.	G	C	10607.14	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.350;DP=3167;Dels=0.00;FS=18.161;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.522;QD=41.76;ReadPosRankSum=-1.133;SB=-4301.33	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:162,0:162:99:0,488,6765	1/1:0,97:97:99:4051,292,0	1/1:0,157:157:99:6556,473,0	0/0:70,0:70:99:0,211,2923	0/0:97,0:97:99:0,292,4051	0/0:174,0:174:99:0,524,7266	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	0/0:146,0:146:99:0,439,6097	0/0:161,0:161:99:0,485,6723	0/0:183,0:183:99:0,551,7642	0/0:167,0:167:99:0,503,6974	0/0:187,0:187:99:0,563,7809	0/0:130,0:130:99:0,391,5429	0/0:175,0:175:99:0,527,7308	0/0:164,0:164:99:0,494,6849	0/0:154,0:154:99:0,464,6431	0/0:176,0:176:99:0,530,7350	0/0:67,0:67:99:0,202,2798	0/0:188,0:188:99:0,566,7851
gi|293339394|gb|GU595196.1|	78383	.	A	G	4635.42	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-2.115;DP=2997;Dels=0.00;FS=259.109;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.613;QD=41.76;ReadPosRankSum=0.627;SB=-83.54	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:177,0:177:99:0,533,7392	0/0:74,0:74:99:0,223,3090	0/0:89,0:89:99:0,268,3717	1/1:0,35:35:99:1462,105,0	1/1:0,48:48:99:2004,144,0	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:197,0:197:99:0,593,8227	0/0:173,0:173:99:0,521,7225	0/0:177,0:177:99:0,533,7392	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	0/0:180,0:180:99:0,542,7517	0/0:160,0:160:99:0,482,6682	0/0:175,0:175:99:0,527,7308	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:172,0:172:99:0,518,7183	1/1:0,28:28:84.28:1169,84,0	0/0:97,0:97:99:0,292,4051
gi|293339394|gb|GU595196.1|	78412	.	A	G	1232.23	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.123;DP=2949;Dels=0.00;FS=76.426;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.258;QD=39.75;ReadPosRankSum=0.307;SB=-0.02	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:180,0:180:99:0,542,7517	0/0:64,0:64:99:0,193,2673	0/0:75,0:75:99:0,226,3132	0/0:42,0:42:99:0,126,1754	0/0:62,0:62:99:0,187,2589	0/0:180,0:180:99:0,542,7517	0/0:153,0:153:99:0,461,6389	0/0:180,0:180:99:0,542,7517	0/0:182,0:182:99:0,548,7600	0/0:189,0:189:99:0,569,7893	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	0/0:156,0:156:99:0,470,6515	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:174,0:174:99:0,524,7266	1/1:0,31:31:93.31:1295,93,0	0/0:102,0:102:99:0,307,4260
gi|293339394|gb|GU595196.1|	78418	.	G	A	1399.27	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.949;DP=2950;Dels=0.00;FS=83.524;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.285;QD=39.98;ReadPosRankSum=2.013;SB=-0.02	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:175,0:175:99:0,527,7308	0/0:63,0:63:99:0,190,2631	0/0:75,0:75:99:0,226,3132	0/0:45,0:45:99:0,135,1879	0/0:64,0:64:99:0,193,2673	0/0:187,0:187:99:0,563,7809	0/0:149,0:149:99:0,448,6222	0/0:186,0:186:99:0,560,7767	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:183,0:183:99:0,551,7642	0/0:170,0:170:99:0,512,7099	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:149,0:149:99:0,448,6222	0/0:184,0:184:99:0,554,7684	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	1/1:0,35:35:99:1462,105,0	0/0:98,0:98:99:0,295,4093
gi|293339394|gb|GU595196.1|	78479	.	C	G	4050.77	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.178;DP=2838;Dels=0.00;FS=244.344;HRun=0;HaplotypeScore=7.5704;InbreedingCoeff=0.9985;MQ=254.00;MQ0=0;MQRankSum=0.384;QD=41.76;ReadPosRankSum=1.524;SB=-0.02	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:176,0:176:99:0,530,7350	0/0:39,0:39:99:0,117,1629	0/0:62,0:62:99:0,187,2589	1/1:0,48:48:99:2004,144,0	1/1:0,42:42:99:1754,126,0	0/0:177,0:177:99:0,533,7392	0/0:152,0:152:99:0,458,6348	0/0:183,0:183:99:0,551,7642	0/0:150,0:150:99:0,452,6264	0/0:187,0:187:99:0,563,7809	0/0:179,0:179:99:0,539,7475	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:156,0:156:99:0,470,6515	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:180,0:180:99:0,542,7517	1/1:0,7:7:21.07:292,21,0	0/0:91,0:91:99:0,274,3800
gi|293339394|gb|GU595196.1|	78487	.	C	A	3424.37	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.049;DP=2774;Dels=0.00;FS=211.099;HRun=0;HaplotypeScore=3.8090;InbreedingCoeff=0.9600;MQ=254.00;MQ0=0;MQRankSum=-0.023;QD=41.76;ReadPosRankSum=1.997;SB=-0.02	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:176,0:176:99:0,530,7350	1/1:0,31:31:93.31:1295,93,0	1/1:0,49:49:99:2046,147,0	0/0:41,0:41:99:0,123,1712	0/0:37,0:37:99:0,111,1545	0/0:196,0:196:99:0,590,8185	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	0/0:147,0:147:99:0,442,6139	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:149,0:149:99:0,448,6222	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:185,0:185:99:0,557,7726	1/1:0,2:2:6.02:84,6,0	0/0:77,0:77:99:0,232,3216
gi|293339394|gb|GU595196.1|	78489	.	C	T	3129.93	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.029;DP=2783;Dels=0.00;FS=200.945;HRun=0;HaplotypeScore=3.6995;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.893;QD=40.65;ReadPosRankSum=1.277;SB=-0.02	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:177,0:177:99:0,533,7392	1/1:0,30:30:90.30:1253,90,0	1/1:0,47:47:99:1963,141,0	0/0:39,0:39:99:0,117,1629	0/0:35,0:35:99:0,105,1462	0/0:198,0:198:99:0,596,8269	0/0:160,0:160:99:0,482,6682	0/0:168,0:168:99:0,506,7016	0/0:153,0:153:99:0,461,6389	0/0:183,0:183:99:0,551,7642	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:149,0:149:99:0,448,6222	0/0:154,0:154:99:0,464,6431	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	0/0:185,0:185:99:0,557,7726	./.	0/0:71,0:71:99:0,214,2965
gi|293339394|gb|GU595196.1|	78515	.	T	G	440.04	.	AC=2;AF=0.053;AN=38;BaseQRankSum=0.441;DP=2476;Dels=0.00;FS=32.977;HRun=0;HaplotypeScore=0.1579;InbreedingCoeff=0.7819;MQ=254.00;MQ0=0;MQRankSum=-0.372;QD=36.67;ReadPosRankSum=-5.278;SB=-0.02	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:159,0:159:99:0,479,6640	./.	0/0:2,0:2:6.02:0,6,84	0/0:3,0:3:9.03:0,9,125	0/0:2,0:2:6.02:0,6,84	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:151,0:151:99:0,455,6306	0/0:143,0:143:99:0,430,5972	0/0:160,0:160:99:0,482,6682	0/0:181,0:181:99:0,545,7559	0/0:156,0:156:99:0,470,6515	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:144,0:144:99:0,433,6013	0/0:166,0:166:99:0,500,6932	0/0:194,0:194:99:0,584,8102	0/0:171,0:171:99:0,515,7141	./.	1/1:0,12:12:36.12:501,36,0
gi|293339394|gb|GU595196.1|	78516	.	A	G	357.15	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.570;DP=2473;Dels=0.00;FS=27.076;HRun=0;HaplotypeScore=0.1666;InbreedingCoeff=0.8209;MQ=254.00;MQ0=0;MQRankSum=-0.372;QD=35.72;ReadPosRankSum=-5.172;SB=-0.02	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:166,0:166:99:0,500,6932	./.	./.	0/0:2,0:2:6.02:0,6,84	0/0:2,0:2:6.02:0,6,84	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	0/0:150,0:150:99:0,452,6264	0/0:142,0:142:99:0,427,5930	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:141,0:141:99:0,424,5888	0/0:165,0:165:99:0,497,6890	0/0:196,0:196:99:0,590,8185	0/0:171,0:171:99:0,515,7141	./.	1/1:0,10:10:30.10:418,30,0
gi|293339394|gb|GU595196.1|	78518	.	C	T	62.59	.	AC=4;AF=0.118;AN=34;BaseQRankSum=0.262;DP=2463;Dels=0.00;FS=6.025;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8287;MQ=254.00;MQ0=0;MQRankSum=-0.319;QD=20.86;ReadPosRankSum=-2.937;SB=-0.02	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	./.	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:172,0:172:99:0,518,7183	0/0:155,0:155:99:0,467,6473	0/0:152,0:152:99:0,458,6348	0/0:149,0:149:99:0,448,6222	0/0:160,0:160:99:0,482,6682	0/0:185,0:185:99:0,557,7726	0/0:152,0:152:99:0,458,6348	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	0/0:141,0:141:99:0,424,5888	0/0:166,0:166:99:0,500,6932	0/0:201,0:201:99:0,605,8394	0/0:167,0:167:99:0,503,6974	./.	./.
gi|293339394|gb|GU595196.1|	80475	.	G	C	441.24	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.867;DP=2624;Dels=0.00;FS=33.064;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.484;QD=36.77;ReadPosRankSum=-1.916;SB=-0.02	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	./.	./.	./.	1/1:0,12:12:36.12:501,36,0	0/0:206,0:206:99:0,620,8603	0/0:152,0:152:99:0,458,6348	0/0:174,0:174:99:0,524,7266	0/0:197,0:197:99:0,593,8227	0/0:185,0:185:99:0,557,7726	0/0:174,0:174:99:0,524,7266	0/0:188,0:188:99:0,566,7851	0/0:161,0:161:99:0,485,6723	0/0:182,0:182:99:0,548,7600	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:158,0:158:99:0,476,6598	./.	./.
gi|293339394|gb|GU595196.1|	80525	.	A	T	1526.95	.	AC=2;AF=0.063;AN=32;BaseQRankSum=1.333;DP=2648;Dels=0.00;FS=111.520;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.217;QD=40.18;ReadPosRankSum=0.042;SB=-0.02	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	./.	./.	./.	1/1:0,38:38:99:1587,114,0	0/0:179,0:179:99:0,539,7475	0/0:198,0:198:99:0,596,8269	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:153,0:153:99:0,461,6389	0/0:168,0:168:99:0,506,7016	0/0:193,0:193:99:0,581,8060	0/0:190,0:190:99:0,572,7934	0/0:171,0:171:99:0,515,7141	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:179,0:179:99:0,539,7475	0/0:182,0:182:99:0,548,7600	./.	./.
gi|293339394|gb|GU595196.1|	80574	.	A	T	130.58	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.713;DP=2587;Dels=0.00;FS=11.961;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=0.8383;MQ=254.00;MQ0=0;MQRankSum=-0.568;QD=26.12;ReadPosRankSum=-3.757;SB=-0.02	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:150,0:150:99:0,452,6264	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	./.	0/0:50,0:50:99:0,151,2088	0/0:174,0:174:99:0,524,7266	0/0:147,0:147:99:0,442,6139	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	0/0:154,0:154:99:0,464,6431	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	0/0:185,0:185:99:0,557,7726	0/0:179,0:179:99:0,539,7475	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	1/1:0,2:2:6.02:84,6,0	./.
gi|293339394|gb|GU595196.1|	80575	.	T	C	112.97	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.676;DP=2569;Dels=0.00;FS=8.963;HRun=0;HaplotypeScore=0.2000;InbreedingCoeff=0.7705;MQ=254.00;MQ0=0;MQRankSum=0.987;QD=28.24;ReadPosRankSum=-3.405;SB=-0.02	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:150,0:150:99:0,452,6264	0/0:2,0:2:6.02:0,6,84	0/0:4,0:4:12.04:0,12,167	./.	0/0:50,0:50:99:0,151,2088	0/0:173,0:173:99:0,521,7225	0/0:148,0:148:99:0,445,6181	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:179,0:179:99:0,539,7475	0/0:153,0:153:99:0,461,6389	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:185,0:185:99:0,557,7726	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	0/0:162,0:162:99:0,488,6765	0/0:2,0:2:6.02:0,6,84	1/1:0,4:4:12.04:167,12,0
gi|293339394|gb|GU595196.1|	80578	.	A	T	1015.80	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.186;DP=2583;Dels=0.00;FS=75.751;HRun=3;HaplotypeScore=0.3999;InbreedingCoeff=0.9649;MQ=254.00;MQ0=0;MQRankSum=-0.506;QD=37.62;ReadPosRankSum=-6.953;SB=-0.02	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	1/1:0,6:6:18.06:251,18,0	1/1:0,11:11:33.11:459,33,0	./.	0/0:52,0:52:99:0,157,2172	0/0:175,0:175:99:0,527,7308	0/0:148,0:148:99:0,445,6181	0/0:174,0:174:99:0,524,7266	0/0:179,0:179:99:0,539,7475	0/0:158,0:158:99:0,476,6598	0/0:180,0:180:99:0,542,7517	0/0:152,0:152:99:0,458,6348	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	0/0:180,0:180:99:0,542,7517	0/0:155,0:155:99:0,467,6473	1/1:0,2:2:6.02:84,6,0	1/1:0,8:8:24.08:334,24,0
gi|293339394|gb|GU595196.1|	80628	.	C	T	6431.11	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.453;DP=2743;Dels=0.00;FS=442.154;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.196;QD=41.76;ReadPosRankSum=4.212;SB=-0.02	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	1/1:0,38:38:99:1587,114,0	1/1:0,42:42:99:1754,126,0	./.	0/0:30,0:30:90.30:0,90,1253	0/0:179,0:179:99:0,539,7475	0/0:161,0:161:99:0,485,6723	0/0:158,0:158:99:0,476,6598	0/0:168,0:168:99:0,506,7016	0/0:184,0:184:99:0,554,7684	0/0:190,0:190:99:0,572,7934	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:153,0:153:99:0,461,6389	0/0:176,0:176:99:0,530,7350	1/1:0,25:25:75.25:1044,75,0	1/1:0,49:49:99:2046,147,0
gi|293339394|gb|GU595196.1|	80645	.	G	A	439.29	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.550;DP=2753;Dels=0.00;FS=13.942;HRun=0;HaplotypeScore=0.5999;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.782;QD=36.61;ReadPosRankSum=-2.896;SB=-83.30	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:163,0:163:99:0,491,6807	0/0:43,0:43:99:0,129,1796	0/0:39,0:39:99:0,117,1629	./.	1/1:0,12:12:36.12:501,36,0	0/0:189,0:189:99:0,569,7893	0/0:157,0:157:99:0,473,6556	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	0/0:184,0:184:99:0,554,7684	0/0:201,0:201:99:0,605,8394	0/0:144,0:144:99:0,433,6013	0/0:166,0:166:99:0,500,6932	0/0:182,0:182:99:0,548,7600	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:162,0:162:99:0,488,6765	0/0:29,0:29:87.29:0,87,1211	0/0:58,0:58:99:0,175,2422
gi|293339394|gb|GU595196.1|	80652	.	C	A	6973.99	.	AC=10;AF=0.250;AN=40;BaseQRankSum=1.567;DP=2709;Dels=0.00;FS=484.757;HRun=0;HaplotypeScore=0.3500;InbreedingCoeff=0.9990;MQ=254.00;MQ0=0;MQRankSum=-1.186;QD=41.76;ReadPosRankSum=-3.945;SB=-0.02	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:169,0:169:99:0,509,7057	1/1:0,40:40:99:1670,120,0	1/1:0,32:32:96.32:1336,96,0	./.	1/1:0,7:7:21.07:292,21,0	0/0:191,0:191:99:0,575,7976	0/0:152,0:152:99:0,458,6348	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/0:186,0:186:99:0,560,7767	0/0:195,0:195:99:0,587,8143	0/0:140,0:140:99:0,421,5846	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:181,0:181:99:0,545,7559	0/0:160,0:160:99:0,482,6682	1/1:0,29:29:87.29:1211,87,0	1/1:0,59:59:99:2464,178,0
gi|293339394|gb|GU595196.1|	80657	.	T	C	6932.23	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-1.744;DP=2706;Dels=0.00;FS=442.034;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=0.037;QD=41.76;ReadPosRankSum=1.824;SB=-83.21	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:171,0:171:99:0,515,7141	1/1:0,43:43:99:1796,129,0	1/1:0,28:28:84.28:1169,84,0	./.	1/1:0,8:8:24.08:334,24,0	0/0:199,0:199:99:0,599,8310	0/0:156,0:156:99:0,470,6515	0/0:169,0:169:99:0,509,7057	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:193,0:193:99:0,581,8060	0/0:146,0:146:99:0,439,6097	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:163,0:163:99:0,491,6807	1/1:0,31:31:93.31:1295,93,0	1/1:0,56:56:99:2339,169,0
gi|293339394|gb|GU595196.1|	80689	.	T	C	2443.71	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.258;DP=2882;Dels=0.00;FS=5.285;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.514;QD=40.73;ReadPosRankSum=2.094;SB=-960.51	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:163,0:163:99:0,491,6807	0/0:66,0:66:99:0,199,2756	0/0:74,0:74:99:0,223,3090	./.	1/1:0,60:60:99:2506,181,0	0/0:188,0:188:99:0,566,7851	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	0/0:188,0:188:99:0,566,7851	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:131,0:131:99:0,394,5471	0/0:155,0:155:99:0,467,6473	0/0:172,0:172:99:0,518,7183	0/0:177,0:177:99:0,533,7392	0/0:48,0:48:99:0,144,2004	0/0:100,0:100:99:0,301,4176
gi|293339394|gb|GU595196.1|	80822	.	T	C	21297.79	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.361;DP=3013;Dels=0.00;FS=124.876;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.769;QD=41.76;ReadPosRankSum=1.542;SB=-7141.04	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	1/1:0,104:104:99:4343,313,0	1/1:0,108:108:99:4510,325,0	./.	1/1:0,82:82:99:3424,247,0	0/0:184,0:184:99:0,554,7684	0/0:150,0:150:99:0,452,6264	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:179,0:179:99:0,539,7475	0/0:160,0:160:99:0,482,6682	0/0:192,0:192:99:0,578,8018	0/0:159,0:159:99:0,479,6640	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	1/1:0,65:65:99:2714,196,0	1/1:0,151:151:99:6306,455,0
gi|293339394|gb|GU595196.1|	80846	.	A	G	6890.47	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.473;DP=3101;Dels=0.00;FS=28.843;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.285;QD=41.76;ReadPosRankSum=-0.943;SB=-2505.64	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:126,0:126:99:0,379,5262	0/0:136,0:136:99:0,409,5679	./.	0/0:77,0:77:99:0,232,3216	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	0/0:197,0:197:99:0,593,8227	0/0:177,0:177:99:0,533,7392	0/0:156,0:156:99:0,470,6515	0/0:153,0:153:99:0,461,6389	0/0:162,0:162:99:0,488,6765	0/0:159,0:159:99:0,479,6640	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	0/0:64,0:64:99:0,193,2673	1/1:0,165:165:99:6890,497,0
gi|293339394|gb|GU595196.1|	81048	.	T	C	2903.07	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.684;DP=3290;Dels=0.00;FS=1.988;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.327;QD=40.89;ReadPosRankSum=-0.971;SB=-1461.63	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:161,0:161:99:0,485,6723	0/0:143,0:143:99:0,430,5972	0/0:178,0:178:99:0,536,7433	./.	0/0:117,0:117:99:0,352,4886	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:183,0:183:99:0,551,7642	0/0:190,0:190:99:0,572,7934	0/0:194,0:194:99:0,584,8102	0/0:149,0:149:99:0,448,6222	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	1/1:0,71:71:99:2965,214,0	0/0:224,0:224:99:0,674,9354
gi|293339394|gb|GU595196.1|	81111	.	T	A	8477.37	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.447;DP=3165;Dels=0.00;FS=4.608;HRun=0;HaplotypeScore=1.0999;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.725;QD=41.76;ReadPosRankSum=0.346;SB=-3925.49	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:127,0:127:99:0,382,5304	0/0:179,0:179:99:0,539,7475	./.	0/0:27,0:27:81.27:0,81,1128	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:187,0:187:99:0,563,7809	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:154,0:154:99:0,464,6431	0/0:161,0:161:99:0,485,6723	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:191,0:191:99:0,575,7976	0/0:155,0:155:99:0,467,6473	0/0:95,0:95:99:0,286,3967	1/1:0,203:203:99:8477,611,0
gi|293339394|gb|GU595196.1|	81117	.	C	T	606.26	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.040;DP=3144;Dels=0.00;FS=6.798;HRun=0;HaplotypeScore=1.0999;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.867;QD=37.89;ReadPosRankSum=-5.498;SB=-208.66	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:179,0:179:99:0,539,7475	0/0:123,0:123:99:0,370,5137	0/0:183,0:183:99:0,551,7642	./.	1/1:0,16:16:48.16:668,48,0	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:183,0:183:99:0,551,7642	0/0:171,0:171:99:0,515,7141	0/0:157,0:157:99:0,473,6556	0/0:149,0:149:99:0,448,6222	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:156,0:156:99:0,470,6515	0/0:163,0:163:99:0,491,6807	0/0:195,0:195:99:0,587,8143	0/0:163,0:163:99:0,491,6807	0/0:88,0:88:99:0,265,3675	0/0:206,0:206:99:0,620,8603
gi|293339394|gb|GU595196.1|	81120	.	A	G	192.11	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-1.509;DP=3142;Dels=0.00;FS=1.629;HRun=1;HaplotypeScore=0.5999;InbreedingCoeff=0.9918;MQ=254.00;MQ0=0;MQRankSum=-0.850;QD=32.02;ReadPosRankSum=-3.635;SB=-79.31	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:181,0:181:99:0,545,7559	0/0:118,0:118:99:0,355,4928	0/0:185,0:185:99:0,557,7726	./.	1/1:0,6:6:18.06:251,18,0	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:172,0:172:99:0,518,7183	0/0:162,0:162:99:0,488,6765	0/0:154,0:154:99:0,464,6431	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:156,0:156:99:0,470,6515	0/0:167,0:167:99:0,503,6974	0/0:195,0:195:99:0,587,8143	0/0:167,0:167:99:0,503,6974	0/0:91,0:91:99:0,274,3800	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	81124	.	T	G	152.25	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-1.138;DP=3168;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9838;MQ=254.00;MQ0=0;MQRankSum=1.604;QD=30.45;ReadPosRankSum=-3.178;SB=-78.59	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:186,0:186:99:0,560,7767	0/0:119,0:119:99:0,358,4969	0/0:191,0:191:99:0,575,7976	./.	1/1:0,5:5:15.05:209,15,0	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:149,0:149:99:0,448,6222	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:189,0:189:99:0,569,7893	0/0:168,0:168:99:0,506,7016	0/0:87,0:87:99:0,262,3633	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	81131	.	T	C	481.01	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.033;DP=3146;Dels=0.00;FS=2.364;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=1.564;QD=37.00;ReadPosRankSum=-3.466;SB=-207.71	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:178,0:178:99:0,536,7433	0/0:119,0:119:99:0,358,4969	0/0:181,0:181:99:0,545,7559	./.	1/1:0,13:13:39.13:543,39,0	0/0:178,0:178:99:0,536,7433	0/0:169,0:169:99:0,509,7057	0/0:180,0:180:99:0,542,7517	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:87,0:87:99:0,262,3633	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	81195	.	G	A	3507.89	.	AC=2;AF=0.050;AN=40;BaseQRankSum=1.136;DP=3217;Dels=0.00;FS=7.340;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.565;QD=41.76;ReadPosRankSum=-0.749;SB=-1503.39	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:173,0:173:99:0,521,7225	0/0:128,0:128:99:0,385,5345	0/0:166,0:166:99:0,500,6932	./.	0/0:111,0:111:99:0,334,4635	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	0/0:155,0:155:99:0,467,6473	0/0:182,0:182:99:0,548,7600	0/0:178,0:178:99:0,536,7433	0/0:171,0:171:99:0,515,7141	0/0:177,0:177:99:0,533,7392	0/0:157,0:157:99:0,473,6556	0/0:149,0:149:99:0,448,6222	0/0:181,0:181:99:0,545,7559	0/0:181,0:181:99:0,545,7559	0/0:164,0:164:99:0,494,6849	1/1:0,84:84:99:3508,253,0	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	81463	.	T	A	5220.06	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.155;DP=3294;Dels=0.00;FS=23.422;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.202;QD=41.76;ReadPosRankSum=-1.134;SB=-1962.75	GT:AD:DP:GQ:PL	0/0:201,0:201:99:0,605,8394	0/0:159,0:159:99:0,479,6640	0/0:119,0:119:99:0,358,4969	0/0:197,0:197:99:0,593,8227	1/1:0,51:51:99:2130,154,0	1/1:0,74:74:99:3090,223,0	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:193,0:193:99:0,581,8060	0/0:155,0:155:99:0,467,6473	0/0:193,0:193:99:0,581,8060	0/0:165,0:165:99:0,497,6890	0/0:175,0:175:99:0,527,7308	0/0:192,0:192:99:0,578,8018	0/0:130,0:130:99:0,391,5429	0/0:197,0:197:99:0,593,8227	0/0:168,0:168:99:0,506,7016	0/0:146,0:146:99:0,439,6097	0/0:54,0:54:99:0,163,2255	0/0:219,0:219:99:0,659,9146
gi|293339394|gb|GU595196.1|	81466	.	A	C	5261.82	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.613;DP=3286;Dels=0.00;FS=25.713;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.119;QD=41.76;ReadPosRankSum=-0.566;SB=-1962.75	GT:AD:DP:GQ:PL	0/0:200,0:200:99:0,602,8352	0/0:154,0:154:99:0,464,6431	0/0:121,0:121:99:0,364,5053	0/0:198,0:198:99:0,596,8269	1/1:0,53:53:99:2213,160,0	1/1:0,73:73:99:3049,220,0	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:191,0:191:99:0,575,7976	0/0:151,0:151:99:0,455,6306	0/0:199,0:199:99:0,599,8310	0/0:163,0:163:99:0,491,6807	0/0:175,0:175:99:0,527,7308	0/0:184,0:184:99:0,554,7684	0/0:134,0:134:99:0,403,5596	0/0:190,0:190:99:0,572,7934	0/0:171,0:171:99:0,515,7141	0/0:148,0:148:99:0,445,6181	0/0:52,0:52:99:0,157,2172	0/0:217,0:217:99:0,653,9062
gi|293339394|gb|GU595196.1|	81499	.	C	T	2276.24	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.614;DP=3308;Dels=0.00;FS=16.588;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.008;QD=40.65;ReadPosRankSum=0.332;SB=-835.22	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	0/0:143,0:143:99:0,430,5972	0/0:189,0:189:99:0,569,7893	0/0:60,0:60:99:0,181,2506	0/0:80,0:80:99:0,241,3341	0/0:170,0:170:99:0,512,7099	0/0:137,0:137:99:0,412,5721	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:216,0:216:99:0,650,9020	0/0:159,0:159:99:0,479,6640	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:188,0:188:99:0,566,7851	0/0:159,0:159:99:0,479,6640	0/0:190,0:190:99:0,572,7934	1/1:0,56:56:99:2339,169,0	0/0:200,0:200:99:0,602,8352
gi|293339394|gb|GU595196.1|	81529	.	C	T	29065.21	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.370;DP=3193;Dels=0.00;FS=9.857;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.349;QD=41.76;ReadPosRankSum=0.278;SB=-13739.17	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	1/1:0,127:127:99:5304,382,0	1/1:0,174:174:99:7266,524,0	1/1:0,71:71:99:2965,214,0	1/1:0,82:82:99:3424,247,0	0/0:190,0:190:99:0,572,7934	0/0:138,0:138:99:0,415,5763	0/0:174,0:174:99:0,524,7266	0/0:149,0:149:99:0,448,6222	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:154,0:154:99:0,464,6431	0/0:148,0:148:99:0,445,6181	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:180,0:180:99:0,542,7517	0/0:145,0:145:99:0,436,6055	0/0:194,0:194:99:0,584,8102	1/1:0,56:56:99:2339,169,0	1/1:0,186:186:99:7767,560,0
gi|293339394|gb|GU595196.1|	81586	.	A	T	4050.77	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.137;DP=3076;Dels=0.00;FS=1.673;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.945;QD=41.76;ReadPosRankSum=-1.059;SB=-2004.50	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:176,0:176:99:0,530,7350	0/0:110,0:110:99:0,331,4594	0/0:184,0:184:99:0,554,7684	1/1:0,27:27:81.27:1128,81,0	1/1:0,42:42:99:1754,126,0	0/0:178,0:178:99:0,536,7433	0/0:138,0:138:99:0,415,5763	0/0:181,0:181:99:0,545,7559	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:180,0:180:99:0,542,7517	0/0:145,0:145:99:0,436,6055	0/0:164,0:164:99:0,494,6849	0/0:148,0:148:99:0,445,6181	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:189,0:189:99:0,569,7893	0/0:166,0:166:99:0,500,6932	1/1:0,28:28:84.28:1169,84,0	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	81607	.	C	T	247.20	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.470;DP=2952;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9046;MQ=254.00;MQ0=0;MQRankSum=0.229;QD=30.90;ReadPosRankSum=-4.777;SB=-134.14	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:156,0:156:99:0,470,6515	0/0:114,0:114:99:0,343,4761	0/0:165,0:165:99:0,497,6890	1/1:0,2:2:6.02:84,6,0	1/1:0,4:4:12.04:167,12,0	0/0:192,0:192:99:0,578,8018	0/0:147,0:147:99:0,442,6139	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:176,0:176:99:0,530,7350	0/0:152,0:152:99:0,458,6348	0/0:152,0:152:99:0,458,6348	0/0:177,0:177:99:0,533,7392	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	1/1:0,2:2:6.02:84,6,0	0/0:182,0:182:99:0,548,7600
gi|293339394|gb|GU595196.1|	81608	.	T	G	246.83	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.080;DP=2945;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9127;MQ=254.00;MQ0=0;MQRankSum=-0.568;QD=30.85;ReadPosRankSum=-4.811;SB=-146.65	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:158,0:158:99:0,476,6598	0/0:117,0:117:99:0,352,4886	0/0:169,0:169:99:0,509,7057	1/1:0,3:3:9.03:125,9,0	1/1:0,3:3:9.03:125,9,0	0/0:193,0:193:99:0,581,8060	0/0:148,0:148:99:0,445,6181	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:150,0:150:99:0,452,6264	0/0:150,0:150:99:0,452,6264	0/0:177,0:177:99:0,533,7392	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	1/1:0,2:2:6.02:84,6,0	0/0:175,0:175:99:0,527,7308
gi|293339394|gb|GU595196.1|	81622	.	C	A	3466.13	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.344;DP=3033;Dels=0.00;FS=1.828;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.510;QD=41.76;ReadPosRankSum=-6.463;SB=-1586.90	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:157,0:157:99:0,473,6556	0/0:116,0:116:99:0,349,4844	0/0:177,0:177:99:0,533,7392	1/1:0,29:29:87.29:1211,87,0	1/1:0,31:31:93.31:1295,93,0	0/0:183,0:183:99:0,551,7642	0/0:157,0:157:99:0,473,6556	0/0:164,0:164:99:0,494,6849	0/0:185,0:185:99:0,557,7726	0/0:181,0:181:99:0,545,7559	0/0:153,0:153:99:0,461,6389	0/0:160,0:160:99:0,482,6682	0/0:184,0:184:99:0,554,7684	0/0:163,0:163:99:0,491,6807	0/0:158,0:158:99:0,476,6598	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:156,0:156:99:0,470,6515	1/1:0,23:23:69.23:960,69,0	0/0:166,0:166:99:0,500,6932
gi|293339394|gb|GU595196.1|	81674	.	T	G	6347.59	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.198;DP=3208;Dels=0.00;FS=13.356;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.305;QD=41.76;ReadPosRankSum=-0.958;SB=-2547.40	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:160,0:160:99:0,482,6682	0/0:115,0:115:99:0,346,4802	0/0:175,0:175:99:0,527,7308	0/0:88,0:88:99:0,265,3675	1/1:0,46:46:99:1921,138,0	0/0:174,0:174:99:0,524,7266	1/1:0,67:67:99:2798,202,0	0/0:147,0:147:99:0,442,6139	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:204,0:204:99:0,614,8519	0/0:182,0:182:99:0,548,7600	0/0:197,0:197:99:0,593,8227	0/0:196,0:196:99:0,590,8185	0/0:176,0:176:99:0,530,7350	0/0:185,0:185:99:0,557,7726	0/0:185,0:185:99:0,557,7726	0/0:168,0:168:99:0,506,7016	1/1:0,39:39:99:1629,117,0	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	81691	.	G	C	1690.86	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.210;DP=3091;Dels=0.00;FS=0.562;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9996;MQ=254.00;MQ0=0;MQRankSum=-0.067;QD=39.32;ReadPosRankSum=-8.550;SB=-825.80	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:170,0:170:99:0,512,7099	0/0:116,0:116:99:0,349,4844	0/0:166,0:166:99:0,500,6932	0/0:83,0:83:99:0,250,3466	1/1:0,15:15:45.15:626,45,0	0/0:180,0:180:99:0,542,7517	1/1:0,19:19:57.19:793,57,0	0/0:167,0:167:99:0,503,6974	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:197,0:197:99:0,593,8227	0/0:183,0:183:99:0,551,7642	0/0:188,0:188:99:0,566,7851	0/0:186,0:186:99:0,560,7767	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	1/1:0,9:9:27.09:376,27,0	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	81697	.	G	C	774.31	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.384;DP=3063;Dels=0.00;FS=7.066;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9922;MQ=254.00;MQ0=0;MQRankSum=0.423;QD=36.87;ReadPosRankSum=-6.220;SB=-286.23	GT:AD:DP:GQ:PL	0/0:191,0:191:99:0,575,7976	0/0:172,0:172:99:0,518,7183	0/0:114,0:114:99:0,343,4761	0/0:170,0:170:99:0,512,7099	0/0:81,0:81:99:0,244,3383	1/1:0,5:5:15.05:209,15,0	0/0:173,0:173:99:0,521,7225	1/1:0,9:9:27.09:376,27,0	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	0/0:185,0:185:99:0,557,7726	0/0:192,0:192:99:0,578,8018	0/0:178,0:178:99:0,536,7433	0/0:187,0:187:99:0,563,7809	0/0:185,0:185:99:0,557,7726	0/0:165,0:165:99:0,497,6890	0/0:175,0:175:99:0,527,7308	0/0:181,0:181:99:0,545,7559	1/1:0,7:7:21.07:292,21,0	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	81703	.	C	G	2275.40	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.282;DP=3092;Dels=0.00;FS=12.207;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.310;QD=39.92;ReadPosRankSum=-7.966;SB=-834.64	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:180,0:180:99:0,542,7517	0/0:117,0:117:99:0,352,4886	0/0:172,0:172:99:0,518,7183	0/0:81,0:81:99:0,244,3383	1/1:0,15:15:45.15:626,45,0	0/0:177,0:177:99:0,533,7392	1/1:0,30:30:90.30:1253,90,0	0/0:168,0:168:99:0,506,7016	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:197,0:197:99:0,593,8227	0/0:174,0:174:99:0,524,7266	0/0:180,0:180:99:0,542,7517	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:182,0:182:99:0,548,7600	1/1:0,12:12:36.12:501,36,0	0/0:188,0:188:99:0,566,7851
gi|293339394|gb|GU595196.1|	81787	.	C	T	8477.37	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.026;DP=3200;Dels=0.00;FS=8.920;HRun=1;HaplotypeScore=7.3800;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.442;QD=41.76;ReadPosRankSum=-0.728;SB=-3925.49	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:163,0:163:99:0,491,6807	0/0:117,0:117:99:0,352,4886	0/0:171,0:171:99:0,515,7141	0/0:92,0:92:99:0,277,3842	1/1:0,52:52:99:2172,157,0	0/0:173,0:173:99:0,521,7225	1/1:0,108:108:99:4510,325,0	0/0:181,0:181:99:0,545,7559	0/0:196,0:196:99:0,590,8185	0/0:159,0:159:99:0,479,6640	0/0:185,0:185:99:0,557,7726	0/0:163,0:163:99:0,491,6807	0/0:194,0:194:99:0,584,8102	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	0/0:177,0:177:99:0,533,7392	0/0:178,0:178:99:0,536,7433	0/0:165,0:165:99:0,497,6890	1/1:0,43:43:99:1796,129,0	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	81793	.	C	A	7475.12	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.815;DP=3245;Dels=0.00;FS=23.637;HRun=1;HaplotypeScore=8.5227;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.800;QD=41.76;ReadPosRankSum=1.145;SB=-2797.96	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:163,0:163:99:0,491,6807	0/0:127,0:127:99:0,382,5304	0/0:177,0:177:99:0,533,7392	0/0:94,0:94:99:0,283,3925	0/0:56,0:56:99:0,169,2339	0/0:180,0:180:99:0,542,7517	0/0:115,0:115:99:0,346,4802	0/0:181,0:181:99:0,545,7559	0/0:194,0:194:99:0,584,8102	0/0:155,0:155:99:0,467,6473	0/0:182,0:182:99:0,548,7600	0/0:173,0:173:99:0,521,7225	0/0:194,0:194:99:0,584,8102	0/0:178,0:178:99:0,536,7433	0/0:160,0:160:99:0,482,6682	0/0:189,0:189:99:0,569,7893	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:46,0:46:99:0,138,1921	1/1:0,179:179:99:7475,539,0
gi|293339394|gb|GU595196.1|	81832	.	G	A	13029.24	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.493;DP=3339;Dels=0.00;FS=11.889;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.816;QD=41.76;ReadPosRankSum=-0.496;SB=-6264.07	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:179,0:179:99:0,539,7475	1/1:0,142:142:99:5930,427,0	1/1:0,170:170:99:7099,512,0	0/0:94,0:94:99:0,283,3925	0/0:64,0:64:99:0,193,2673	0/0:197,0:197:99:0,593,8227	0/0:128,0:128:99:0,385,5345	0/0:172,0:172:99:0,518,7183	0/0:195,0:195:99:0,587,8143	0/0:185,0:185:99:0,557,7726	0/0:184,0:184:99:0,554,7684	0/0:177,0:177:99:0,533,7392	0/0:189,0:189:99:0,569,7893	0/0:191,0:191:99:0,575,7976	0/0:153,0:153:99:0,461,6389	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	0/0:174,0:174:99:0,524,7266	0/0:58,0:58:99:0,175,2422	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	81884	.	C	T	1315.75	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.118;DP=3245;Dels=0.00;FS=9.438;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.760;QD=39.87;ReadPosRankSum=1.222;SB=-459.38	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:123,0:123:99:0,370,5137	0/0:174,0:174:99:0,524,7266	0/0:80,0:80:99:0,241,3341	0/0:66,0:66:99:0,199,2756	0/0:179,0:179:99:0,539,7475	0/0:108,0:108:99:0,325,4510	0/0:157,0:157:99:0,473,6556	0/0:185,0:185:99:0,557,7726	0/0:172,0:172:99:0,518,7183	0/0:182,0:182:99:0,548,7600	0/0:179,0:179:99:0,539,7475	0/0:181,0:181:99:0,545,7559	0/0:189,0:189:99:0,569,7893	0/0:168,0:168:99:0,506,7016	0/0:150,0:150:99:0,452,6264	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	1/1:0,33:33:99:1378,99,0	0/0:213,0:213:99:0,641,8895
gi|293339394|gb|GU595196.1|	81898	.	T	C	21214.27	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.820;DP=3207;Dels=0.00;FS=2.014;HRun=1;HaplotypeScore=0.4285;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.027;QD=41.76;ReadPosRankSum=-1.243;SB=-10523.62	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	1/1:0,122:122:99:5095,367,0	1/1:0,183:183:99:7642,551,0	0/0:90,0:90:99:0,271,3758	0/0:42,0:42:99:0,126,1754	0/0:186,0:186:99:0,560,7767	0/0:76,0:76:99:0,229,3174	0/0:182,0:182:99:0,548,7600	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:187,0:187:99:0,563,7809	0/0:180,0:180:99:0,542,7517	0/0:202,0:202:99:0,608,8436	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:180,0:180:99:0,542,7517	0/0:20,0:20:60.20:0,60,835	1/1:0,203:203:99:8477,611,0
gi|293339394|gb|GU595196.1|	81905	.	C	T	314.15	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.380;DP=3154;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=3.2377;InbreedingCoeff=0.9990;MQ=254.00;MQ0=0;MQRankSum=-1.456;QD=34.91;ReadPosRankSum=-3.208;SB=-162.19	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:121,0:121:99:0,364,5053	0/0:173,0:173:99:0,521,7225	0/0:89,0:89:99:0,268,3717	0/0:35,0:35:99:0,105,1462	0/0:187,0:187:99:0,563,7809	0/0:65,0:65:99:0,196,2714	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:191,0:191:99:0,575,7976	0/0:178,0:178:99:0,536,7433	0/0:210,0:210:99:0,632,8770	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	1/1:0,9:9:27.09:376,27,0	0/0:195,0:195:99:0,587,8143
gi|293339394|gb|GU595196.1|	81914	.	C	A	2378.25	.	AC=4;AF=0.100;AN=40;BaseQRankSum=0.909;DP=3137;Dels=0.00;FS=10.489;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.132;QD=40.31;ReadPosRankSum=-4.116;SB=-960.48	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:130,0:130:99:0,391,5429	0/0:171,0:171:99:0,515,7141	0/0:92,0:92:99:0,277,3842	1/1:0,17:17:51.17:710,51,0	0/0:195,0:195:99:0,587,8143	1/1:0,42:42:99:1754,126,0	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:184,0:184:99:0,554,7684	0/0:174,0:174:99:0,524,7266	0/0:206,0:206:99:0,620,8603	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	./.	0/0:217,0:217:99:0,653,9062
gi|293339394|gb|GU595196.1|	81923	.	C	T	1167.25	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.802;DP=3085;Dels=0.00;FS=2.344;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.244;QD=38.91;ReadPosRankSum=-7.010;SB=-542.34	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:122,0:122:99:0,367,5095	0/0:169,0:169:99:0,509,7057	0/0:95,0:95:99:0,286,3967	1/1:0,11:11:33.11:459,33,0	0/0:191,0:191:99:0,575,7976	1/1:0,19:19:57.19:793,57,0	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	0/0:190,0:190:99:0,572,7934	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:187,0:187:99:0,563,7809	0/0:186,0:186:99:0,560,7767	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	./.	0/0:230,0:230:99:0,692,9605
gi|293339394|gb|GU595196.1|	81956	.	C	A,G	22467.08	.	AC=4,2;AF=0.111,0.056;AN=36;BaseQRankSum=1.830;DP=3066;Dels=0.00;FS=5.384;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.796;QD=41.76;ReadPosRankSum=-1.743;SB=-10801.87	GT:AD:DP:GQ:PL	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:155,0,0:155:99:0,467,6473,467,6473,6473	1/1:0,135,0:135:99:5638,406,0,5638,406,5638	1/1:0,190,0:190:99:7934,572,0,7934,572,7934	0/0:108,0,0:108:99:0,325,4510,325,4510,4510	./.	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	./.	0/0:180,0,0:180:99:0,542,7517,542,7517,7517	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	0/0:158,0,0:158:99:0,476,6598,476,6598,6598	0/0:184,0,0:184:99:0,554,7684,554,7684,7684	0/0:185,0,0:185:99:0,557,7726,557,7726,7726	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:158,0,0:158:99:0,476,6598,476,6598,6598	0/0:197,0,0:197:99:0,593,8227,593,8227,8227	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	./.	2/2:0,0,213:213:99:8895,8895,8895,641,641,0
gi|293339394|gb|GU595196.1|	81965	.	T	C	1983.06	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.310;DP=3071;Dels=0.00;FS=4.063;HRun=0;HaplotypeScore=9.9987;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.048;QD=39.66;ReadPosRankSum=-8.178;SB=-918.18	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:165,0:165:99:0,497,6890	0/0:136,0:136:99:0,409,5679	0/0:190,0:190:99:0,572,7934	0/0:102,0:102:99:0,307,4260	1/1:0,14:14:42.14:585,42,0	0/0:171,0:171:99:0,515,7141	1/1:0,22:22:66.22:919,66,0	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:151,0:151:99:0,455,6306	0/0:188,0:188:99:0,566,7851	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	0/0:180,0:180:99:0,542,7517	1/1:0,14:14:42.14:585,42,0	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	81998	.	C	T	10607.14	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.873;DP=3277;Dels=0.00;FS=5.293;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.243;QD=41.76;ReadPosRankSum=3.417;SB=-4593.66	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:147,0:147:99:0,442,6139	0/0:181,0:181:99:0,545,7559	0/0:96,0:96:99:0,289,4009	1/1:0,64:64:99:2673,193,0	0/0:175,0:175:99:0,527,7308	1/1:0,112:112:99:4677,337,0	0/0:170,0:170:99:0,512,7099	0/0:186,0:186:99:0,560,7767	0/0:151,0:151:99:0,455,6306	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:181,0:181:99:0,545,7559	1/1:0,78:78:99:3257,235,0	0/0:202,0:202:99:0,608,8436
gi|293339394|gb|GU595196.1|	82022	.	A	C	11108.27	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.067;DP=3311;Dels=0.00;FS=2.480;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=3.066;QD=41.76;ReadPosRankSum=1.234;SB=-5428.86	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:157,0:157:99:0,473,6556	1/1:0,109:109:99:4552,328,0	1/1:0,157:157:99:6556,473,0	0/0:113,0:113:99:0,340,4719	0/0:82,0:82:99:0,247,3424	0/0:167,0:167:99:0,503,6974	0/0:131,0:131:99:0,394,5471	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	0/0:190,0:190:99:0,572,7934	0/0:179,0:179:99:0,539,7475	0/0:169,0:169:99:0,509,7057	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:87,0:87:99:0,262,3633	0/0:219,0:219:99:0,659,9146
gi|293339394|gb|GU595196.1|	82055	.	T	C	8936.73	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.630;DP=3261;Dels=0.00;FS=3.600;HRun=0;HaplotypeScore=2.5235;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.204;QD=41.76;ReadPosRankSum=1.761;SB=-4343.09	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:154,0:154:99:0,464,6431	0/0:118,0:118:99:0,355,4928	0/0:155,0:155:99:0,467,6473	0/0:113,0:113:99:0,340,4719	1/1:0,61:61:99:2547,184,0	0/0:171,0:171:99:0,515,7141	1/1:0,95:95:99:3967,286,0	0/0:167,0:167:99:0,503,6974	0/0:189,0:189:99:0,569,7893	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:188,0:188:99:0,566,7851	0/0:191,0:191:99:0,575,7976	0/0:195,0:195:99:0,587,8143	0/0:149,0:149:99:0,448,6222	0/0:176,0:176:99:0,530,7350	0/0:205,0:205:99:0,617,8561	0/0:179,0:179:99:0,539,7475	1/1:0,58:58:99:2422,175,0	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	82058	.	C	T	6639.91	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.685;DP=3228;Dels=0.00;FS=0.928;HRun=0;HaplotypeScore=4.3328;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.015;QD=41.76;ReadPosRankSum=-0.465;SB=-3299.09	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:152,0:152:99:0,458,6348	0/0:120,0:120:99:0,361,5011	0/0:154,0:154:99:0,464,6431	0/0:108,0:108:99:0,325,4510	1/1:0,64:64:99:2673,193,0	0/0:180,0:180:99:0,542,7517	1/1:0,95:95:99:3967,286,0	0/0:158,0:158:99:0,476,6598	0/0:190,0:190:99:0,572,7934	0/0:157,0:157:99:0,473,6556	0/0:166,0:166:99:0,500,6932	0/0:188,0:188:99:0,566,7851	0/0:183,0:183:99:0,551,7642	0/0:195,0:195:99:0,587,8143	0/0:143,0:143:99:0,430,5972	0/0:175,0:175:99:0,527,7308	0/0:211,0:211:99:0,635,8811	0/0:176,0:176:99:0,530,7350	0/0:56,0:56:99:0,169,2339	0/0:203,0:203:99:0,611,8477
gi|293339394|gb|GU595196.1|	82067	.	C	T	1942.15	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.827;DP=3197;Dels=0.00;FS=10.974;HRun=0;HaplotypeScore=2.2854;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.317;QD=40.46;ReadPosRankSum=-1.497;SB=-751.70	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:150,0:150:99:0,452,6264	0/0:116,0:116:99:0,349,4844	0/0:153,0:153:99:0,461,6389	0/0:95,0:95:99:0,286,3967	0/0:58,0:58:99:0,175,2422	0/0:187,0:187:99:0,563,7809	0/0:88,0:88:99:0,265,3675	0/0:162,0:162:99:0,488,6765	0/0:190,0:190:99:0,572,7934	0/0:155,0:155:99:0,467,6473	0/0:160,0:160:99:0,482,6682	0/0:180,0:180:99:0,542,7517	0/0:180,0:180:99:0,542,7517	0/0:193,0:193:99:0,581,8060	0/0:145,0:145:99:0,436,6055	0/0:170,0:170:99:0,512,7099	0/0:207,0:207:99:0,623,8644	0/0:179,0:179:99:0,539,7475	1/1:0,48:48:99:2004,144,0	0/0:214,0:214:99:0,644,8937
gi|293339394|gb|GU595196.1|	82091	.	T	C	7892.72	.	AC=6;AF=0.143;AN=42;BaseQRankSum=2.243;DP=3216;Dels=0.00;FS=32.684;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.060;QD=41.76;ReadPosRankSum=4.038;SB=-2965.00	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:148,0:148:99:0,445,6181	0/0:121,0:121:99:0,364,5053	0/0:136,0:136:99:0,409,5679	0/0:79,0:79:99:0,238,3299	1/1:0,56:56:99:2339,169,0	0/0:192,0:192:99:0,578,8018	1/1:0,86:86:99:3591,259,0	0/0:151,0:151:99:0,455,6306	0/0:171,0:171:99:0,515,7141	0/0:156,0:156:99:0,470,6515	0/0:163,0:163:99:0,491,6807	0/0:190,0:190:99:0,572,7934	0/0:177,0:177:99:0,533,7392	0/0:195,0:195:99:0,587,8143	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:198,0:198:99:0,596,8269	0/0:202,0:202:99:0,608,8436	1/1:0,47:47:99:1963,141,0	0/0:223,0:223:99:0,671,9313
gi|293339394|gb|GU595196.1|	82151	.	G	A	6097.03	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.085;DP=3099;Dels=0.00;FS=21.830;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.429;QD=41.76;ReadPosRankSum=0.102;SB=-2338.60	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:111,0:111:99:0,334,4635	0/0:138,0:138:99:0,415,5763	0/0:113,0:113:99:0,340,4719	1/1:0,49:49:99:2046,147,0	0/0:190,0:190:99:0,572,7934	1/1:0,97:97:99:4051,292,0	0/0:167,0:167:99:0,503,6974	0/0:156,0:156:99:0,470,6515	0/0:138,0:138:99:0,415,5763	0/0:181,0:181:99:0,545,7559	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	0/0:51,0:51:99:0,154,2130	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	82223	.	G	A	832.37	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.100;DP=2936;Dels=0.00;FS=4.036;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=-1.087;QD=37.84;ReadPosRankSum=-6.312;SB=-373.60	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:157,0:157:99:0,473,6556	0/0:107,0:107:99:0,322,4468	0/0:148,0:148:99:0,445,6181	0/0:87,0:87:99:0,262,3633	1/1:0,10:10:30.10:418,30,0	0/0:177,0:177:99:0,533,7392	1/1:0,12:12:36.12:501,36,0	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:157,0:157:99:0,473,6556	0/0:144,0:144:99:0,433,6013	0/0:177,0:177:99:0,533,7392	0/0:161,0:161:99:0,485,6723	0/0:166,0:166:99:0,500,6932	0/0:191,0:191:99:0,575,7976	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:48,0:48:99:0,144,2004	0/0:174,0:174:99:0,524,7266
gi|293339394|gb|GU595196.1|	82226	.	T	G	417.79	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.868;DP=2971;Dels=0.00;FS=1.107;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=0.9914;MQ=254.00;MQ0=0;MQRankSum=0.123;QD=34.82;ReadPosRankSum=-5.535;SB=-200.51	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:162,0:162:99:0,488,6765	0/0:110,0:110:99:0,331,4594	0/0:151,0:151:99:0,455,6306	0/0:85,0:85:99:0,256,3550	1/1:0,6:6:18.06:251,18,0	0/0:175,0:175:99:0,527,7308	1/1:0,6:6:18.06:251,18,0	0/0:182,0:182:99:0,548,7600	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	0/0:145,0:145:99:0,436,6055	0/0:185,0:185:99:0,557,7726	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:191,0:191:99:0,575,7976	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	0/0:59,0:59:99:0,178,2464	0/0:182,0:182:99:0,548,7600
gi|293339394|gb|GU595196.1|	82229	.	C	A	707.28	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.806;DP=2999;Dels=0.00;FS=6.010;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9992;MQ=254.00;MQ0=0;MQRankSum=1.414;QD=37.23;ReadPosRankSum=-6.499;SB=-289.51	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:108,0:108:99:0,325,4510	0/0:150,0:150:99:0,452,6264	0/0:91,0:91:99:0,274,3800	1/1:0,10:10:30.10:418,30,0	0/0:181,0:181:99:0,545,7559	1/1:0,9:9:27.09:376,27,0	0/0:183,0:183:99:0,551,7642	0/0:170,0:170:99:0,512,7099	0/0:160,0:160:99:0,482,6682	0/0:147,0:147:99:0,442,6139	0/0:184,0:184:99:0,554,7684	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:192,0:192:99:0,578,8018	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:163,0:163:99:0,491,6807	0/0:58,0:58:99:0,175,2422	0/0:187,0:187:99:0,563,7809
gi|293339394|gb|GU595196.1|	82253	.	A	G	5428.86	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.017;DP=3145;Dels=0.00;FS=3.764;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.165;QD=41.76;ReadPosRankSum=0.187;SB=-2505.64	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	0/0:99,0:99:99:0,298,4134	0/0:148,0:148:99:0,445,6181	0/0:99,0:99:99:0,298,4134	1/1:0,61:61:99:2547,184,0	0/0:186,0:186:99:0,560,7767	1/1:0,69:69:99:2881,208,0	0/0:192,0:192:99:0,578,8018	0/0:157,0:157:99:0,473,6556	0/0:152,0:152:99:0,458,6348	0/0:158,0:158:99:0,476,6598	0/0:199,0:199:99:0,599,8310	0/0:170,0:170:99:0,512,7099	0/0:191,0:191:99:0,575,7976	0/0:177,0:177:99:0,533,7392	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:173,0:173:99:0,521,7225	0/0:72,0:72:99:0,217,3007	0/0:188,0:188:99:0,566,7851
gi|293339394|gb|GU595196.1|	82289	.	G	T	7892.72	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.293;DP=3198;Dels=0.00;FS=2.217;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.252;QD=41.76;ReadPosRankSum=-0.774;SB=-3716.69	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:110,0:110:99:0,331,4594	0/0:159,0:159:99:0,479,6640	0/0:80,0:80:99:0,241,3341	0/0:85,0:85:99:0,256,3550	0/0:182,0:182:99:0,548,7600	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:136,0:136:99:0,409,5679	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:162,0:162:99:0,488,6765	0/0:194,0:194:99:0,584,8102	0/0:161,0:161:99:0,485,6723	0/0:156,0:156:99:0,470,6515	0/0:157,0:157:99:0,473,6556	0/0:173,0:173:99:0,521,7225	0/0:84,0:84:99:0,253,3508	1/1:0,189:189:99:7893,569,0
gi|293339394|gb|GU595196.1|	82304	.	T	C	17956.96	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.706;DP=3236;Dels=0.00;FS=17.665;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.391;QD=41.76;ReadPosRankSum=1.260;SB=-7809.20	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:162,0:162:99:0,488,6765	0/0:122,0:122:99:0,367,5095	0/0:154,0:154:99:0,464,6431	0/0:77,0:77:99:0,232,3216	1/1:0,85:85:99:3550,256,0	0/0:190,0:190:99:0,572,7934	1/1:0,168:168:99:7016,506,0	0/0:153,0:153:99:0,461,6389	0/0:191,0:191:99:0,575,7976	0/0:162,0:162:99:0,488,6765	0/0:155,0:155:99:0,467,6473	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:186,0:186:99:0,560,7767	0/0:171,0:171:99:0,515,7141	0/0:144,0:144:99:0,433,6013	0/0:159,0:159:99:0,479,6640	0/0:169,0:169:99:0,509,7057	0/0:84,0:84:99:0,253,3508	1/1:0,177:177:99:7392,533,0
gi|293339394|gb|GU595196.1|	82321	.	A	G	3466.13	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.577;DP=3348;Dels=0.00;FS=1.312;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.216;QD=41.76;ReadPosRankSum=0.856;SB=-1628.67	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:122,0:122:99:0,367,5095	0/0:152,0:152:99:0,458,6348	0/0:80,0:80:99:0,241,3341	0/0:85,0:85:99:0,256,3550	0/0:205,0:205:99:0,617,8561	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:192,0:192:99:0,578,8018	0/0:181,0:181:99:0,545,7559	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:204,0:204:99:0,614,8519	0/0:173,0:173:99:0,521,7225	0/0:150,0:150:99:0,452,6264	0/0:180,0:180:99:0,542,7517	0/0:170,0:170:99:0,512,7099	1/1:0,83:83:99:3466,250,0	0/0:184,0:184:99:0,554,7684
gi|293339394|gb|GU595196.1|	82346	.	T	C	7516.88	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.719;DP=3321;Dels=0.00;FS=1.895;HRun=1;HaplotypeScore=2.4759;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.310;QD=41.76;ReadPosRankSum=-0.357;SB=-3633.17	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:151,0:151:99:0,455,6306	0/0:131,0:131:99:0,394,5471	0/0:159,0:159:99:0,479,6640	0/0:100,0:100:99:0,301,4176	0/0:84,0:84:99:0,253,3508	0/0:194,0:194:99:0,584,8102	0/0:150,0:150:99:0,452,6264	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:184,0:184:99:0,554,7684	0/0:208,0:208:99:0,626,8686	0/0:167,0:167:99:0,503,6974	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:188,0:188:99:0,566,7851	0/0:159,0:159:99:0,479,6640	0/0:66,0:66:99:0,199,2756	1/1:0,180:180:99:7517,542,0
gi|293339394|gb|GU595196.1|	82355	.	G	A	2109.20	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.689;DP=3238;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=2.4759;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.715;QD=40.56;ReadPosRankSum=1.492;SB=-1085.79	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	0/0:121,0:121:99:0,364,5053	0/0:164,0:164:99:0,494,6849	0/0:96,0:96:99:0,289,4009	0/0:80,0:80:99:0,241,3341	0/0:189,0:189:99:0,569,7893	0/0:152,0:152:99:0,458,6348	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:203,0:203:99:0,611,8477	0/0:163,0:163:99:0,491,6807	0/0:181,0:181:99:0,545,7559	0/0:170,0:170:99:0,512,7099	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:148,0:148:99:0,445,6181	1/1:0,52:52:99:2172,157,0	0/0:181,0:181:99:0,545,7559
gi|293339394|gb|GU595196.1|	82391	.	C	T	6389.35	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.821;DP=2802;Dels=0.00;FS=4.980;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9960;MQ=254.00;MQ0=0;MQRankSum=-0.385;QD=41.76;ReadPosRankSum=-7.782;SB=-2713.70	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:156,0:156:99:0,470,6515	1/1:0,34:34:99:1420,102,0	1/1:0,48:48:99:2004,144,0	0/0:96,0:96:99:0,289,4009	1/1:0,23:23:69.23:960,69,0	0/0:190,0:190:99:0,572,7934	1/1:0,43:43:99:1796,129,0	0/0:152,0:152:99:0,458,6348	0/0:162,0:162:99:0,488,6765	0/0:151,0:151:99:0,455,6306	0/0:185,0:185:99:0,557,7726	0/0:177,0:177:99:0,533,7392	0/0:176,0:176:99:0,530,7350	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:180,0:180:99:0,542,7517	0/0:153,0:153:99:0,461,6389	0/0:163,0:163:99:0,491,6807	1/1:0,5:5:15.05:209,15,0	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	82392	.	A	C	5762.94	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.171;DP=2778;Dels=0.00;FS=2.675;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9552;MQ=254.00;MQ0=0;MQRankSum=-0.691;QD=41.76;ReadPosRankSum=-7.703;SB=-2505.64	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:157,0:157:99:0,473,6556	1/1:0,30:30:90.30:1253,90,0	1/1:0,46:46:99:1921,138,0	0/0:94,0:94:99:0,283,3925	1/1:0,21:21:63.21:877,63,0	0/0:191,0:191:99:0,575,7976	1/1:0,40:40:99:1670,120,0	0/0:151,0:151:99:0,455,6306	0/0:159,0:159:99:0,479,6640	0/0:150,0:150:99:0,452,6264	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	0/0:153,0:153:99:0,461,6389	0/0:164,0:164:99:0,494,6849	1/1:0,1:1:3.01:42,3,0	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	82409	.	C	T	1417.01	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.486;DP=2702;Dels=0.00;FS=0.611;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9825;MQ=254.00;MQ0=0;MQRankSum=0.391;QD=38.30;ReadPosRankSum=-9.195;SB=-701.67	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	1/1:0,8:8:24.08:334,24,0	1/1:0,10:10:30.10:418,30,0	0/0:96,0:96:99:0,289,4009	1/1:0,3:3:9.03:125,9,0	0/0:197,0:197:99:0,593,8227	1/1:0,10:10:30.10:418,30,0	0/0:150,0:150:99:0,452,6264	0/0:153,0:153:99:0,461,6389	0/0:163,0:163:99:0,491,6807	0/0:184,0:184:99:0,554,7684	0/0:195,0:195:99:0,587,8143	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:180,0:180:99:0,542,7517	0/0:145,0:145:99:0,436,6055	0/0:161,0:161:99:0,485,6723	1/1:0,6:6:18.06:251,18,0	0/0:183,0:183:99:0,551,7642
gi|293339394|gb|GU595196.1|	82421	.	C	T	7850.96	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.040;DP=2837;Dels=0.00;FS=1.866;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.589;QD=41.76;ReadPosRankSum=-9.159;SB=-3758.45	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:184,0:184:99:0,554,7684	1/1:0,46:46:99:1921,138,0	1/1:0,48:48:99:2004,144,0	0/0:98,0:98:99:0,295,4093	1/1:0,27:27:81.27:1128,81,0	0/0:198,0:198:99:0,596,8269	1/1:0,33:33:99:1378,99,0	0/0:151,0:151:99:0,455,6306	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:179,0:179:99:0,539,7475	0/0:184,0:184:99:0,554,7684	0/0:175,0:175:99:0,527,7308	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	1/1:0,34:34:99:1420,102,0	0/0:135,0:135:99:0,406,5638
gi|293339394|gb|GU595196.1|	82439	.	C	T	2443.28	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.568;DP=2931;Dels=0.00;FS=3.587;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.080;QD=40.72;ReadPosRankSum=-5.325;SB=-1127.55	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:107,0:107:99:0,322,4468	0/0:104,0:104:99:0,313,4343	0/0:90,0:90:99:0,271,3758	0/0:56,0:56:99:0,169,2339	0/0:186,0:186:99:0,560,7767	0/0:74,0:74:99:0,223,3090	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:177,0:177:99:0,533,7392	0/0:181,0:181:99:0,545,7559	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:59,0:59:99:0,178,2464	1/1:0,60:60:99:2506,181,0
gi|293339394|gb|GU595196.1|	82442	.	T	C	2693.84	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.145;DP=2975;Dels=0.00;FS=0.948;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.083;QD=40.82;ReadPosRankSum=-8.570;SB=-1336.35	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:114,0:114:99:0,343,4761	0/0:114,0:114:99:0,343,4761	0/0:88,0:88:99:0,265,3675	0/0:59,0:59:99:0,178,2464	0/0:188,0:188:99:0,566,7851	0/0:83,0:83:99:0,250,3466	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:61,0:61:99:0,184,2547	1/1:0,66:66:99:2756,199,0
gi|293339394|gb|GU595196.1|	82455	.	G	C	3069.68	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.560;DP=3141;Dels=0.00;FS=0.882;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.753;QD=40.93;ReadPosRankSum=-4.210;SB=-1503.39	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:148,0:148:99:0,445,6181	0/0:159,0:159:99:0,479,6640	0/0:93,0:93:99:0,280,3884	0/0:79,0:79:99:0,238,3299	0/0:184,0:184:99:0,554,7684	0/0:114,0:114:99:0,343,4761	0/0:173,0:173:99:0,521,7225	0/0:181,0:181:99:0,545,7559	0/0:156,0:156:99:0,470,6515	0/0:155,0:155:99:0,467,6473	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:166,0:166:99:0,500,6932	0/0:94,0:94:99:0,283,3925	1/1:0,75:75:99:3132,226,0
gi|293339394|gb|GU595196.1|	82466	.	G	T	8602.65	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.298;DP=3229;Dels=0.00;FS=24.064;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.551;QD=41.76;ReadPosRankSum=0.656;SB=-3382.61	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:167,0:167:99:0,503,6974	0/0:151,0:151:99:0,455,6306	0/0:159,0:159:99:0,479,6640	0/0:89,0:89:99:0,268,3717	1/1:0,81:81:99:3383,244,0	0/0:175,0:175:99:0,527,7308	1/1:0,125:125:99:5220,376,0	0/0:192,0:192:99:0,578,8018	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	0/0:170,0:170:99:0,512,7099	0/0:179,0:179:99:0,539,7475	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:155,0:155:99:0,467,6473	0/0:168,0:168:99:0,506,7016	0/0:186,0:186:99:0,560,7767	0/0:176,0:176:99:0,530,7350	0/0:91,0:91:99:0,274,3800	0/0:123,0:123:99:0,370,5137
gi|293339394|gb|GU595196.1|	82523	.	G	A	9688.42	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.455;DP=3207;Dels=0.00;FS=0.498;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.461;QD=41.76;ReadPosRankSum=-0.025;SB=-4635.42	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:152,0:152:99:0,458,6348	0/0:109,0:109:99:0,328,4552	0/0:171,0:171:99:0,515,7141	0/0:84,0:84:99:0,253,3508	1/1:0,92:92:99:3842,277,0	0/0:188,0:188:99:0,566,7851	1/1:0,140:140:99:5846,421,0	0/0:171,0:171:99:0,515,7141	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:190,0:190:99:0,572,7934	0/0:179,0:179:99:0,539,7475	0/0:157,0:157:99:0,473,6556	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	0/0:146,0:146:99:0,439,6097	0/0:156,0:156:99:0,470,6515	0/0:152,0:152:99:0,458,6348	0/0:86,0:86:99:0,259,3591	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	82584	.	A	G	9730.18	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.800;DP=3216;Dels=0.00;FS=24.691;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.011;QD=41.76;ReadPosRankSum=-0.842;SB=-3800.21	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:159,0:159:99:0,479,6640	0/0:109,0:109:99:0,328,4552	0/0:140,0:140:99:0,421,5846	0/0:80,0:80:99:0,241,3341	1/1:0,91:91:99:3800,274,0	0/0:187,0:187:99:0,563,7809	1/1:0,142:142:99:5930,427,0	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:197,0:197:99:0,593,8227	0/0:190,0:190:99:0,572,7934	0/0:178,0:178:99:0,536,7433	0/0:169,0:169:99:0,509,7057	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	0/0:156,0:156:99:0,470,6515	0/0:60,0:60:99:0,181,2506	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	82669	.	A	C	14156.77	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.255;DP=3250;Dels=0.00;FS=1.361;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.161;QD=41.76;ReadPosRankSum=0.400;SB=-6932.23	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:150,0:150:99:0,452,6264	0/0:98,0:98:99:0,295,4093	0/0:164,0:164:99:0,494,6849	0/0:95,0:95:99:0,286,3967	1/1:0,96:96:99:4009,289,0	0/0:180,0:180:99:0,542,7517	1/1:0,155:155:99:6473,467,0	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:182,0:182:99:0,548,7600	0/0:197,0:197:99:0,593,8227	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:147,0:147:99:0,442,6139	1/1:0,88:88:99:3675,265,0	0/0:187,0:187:99:0,563,7809
gi|293339394|gb|GU595196.1|	82870	.	C	A	11609.39	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.099;DP=3259;Dels=0.00;FS=0.702;HRun=1;HaplotypeScore=13.2363;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.108;QD=41.76;ReadPosRankSum=1.549;SB=-5762.94	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	1/1:0,116:116:99:4844,349,0	1/1:0,162:162:99:6765,488,0	0/0:87,0:87:99:0,262,3633	0/0:100,0:100:99:0,301,4176	0/0:180,0:180:99:0,542,7517	0/0:152,0:152:99:0,458,6348	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:154,0:154:99:0,464,6431	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:160,0:160:99:0,482,6682	0/0:152,0:152:99:0,458,6348	0/0:92,0:92:99:0,277,3842	0/0:219,0:219:99:0,659,9146
gi|293339394|gb|GU595196.1|	82873	.	G	A	25097.98	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.439;DP=3265;Dels=0.00;FS=1.859;HRun=0;HaplotypeScore=12.3317;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.376;QD=41.76;ReadPosRankSum=2.657;SB=-12528.12	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	1/1:0,113:113:99:4719,340,0	1/1:0,164:164:99:6849,494,0	0/0:88,0:88:99:0,265,3675	1/1:0,91:91:99:3800,274,0	0/0:185,0:185:99:0,557,7726	1/1:0,145:145:99:6055,436,0	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:154,0:154:99:0,464,6431	0/0:159,0:159:99:0,479,6640	0/0:186,0:186:99:0,560,7767	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:151,0:151:99:0,455,6306	1/1:0,88:88:99:3675,265,0	0/0:218,0:218:99:0,656,9104
gi|293339394|gb|GU595196.1|	82890	.	C	G	10231.30	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.184;DP=3251;Dels=0.00;FS=12.669;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.996;QD=41.76;ReadPosRankSum=-3.737;SB=-4384.85	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:168,0:168:99:0,506,7016	0/0:112,0:112:99:0,337,4677	0/0:168,0:168:99:0,506,7016	0/0:88,0:88:99:0,265,3675	1/1:0,97:97:99:4051,292,0	0/0:200,0:200:99:0,602,8352	1/1:0,148:148:99:6181,445,0	0/0:161,0:161:99:0,485,6723	0/0:150,0:150:99:0,452,6264	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:180,0:180:99:0,542,7517	0/0:184,0:184:99:0,554,7684	0/0:165,0:165:99:0,497,6890	0/0:156,0:156:99:0,470,6515	0/0:90,0:90:99:0,271,3758	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	82915	.	G	A	21172.51	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.241;DP=3049;Dels=0.00;FS=8.011;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.736;QD=41.76;ReadPosRankSum=6.529;SB=-9604.90	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	1/1:0,75:75:99:3132,226,0	1/1:0,130:130:99:5429,391,0	0/0:90,0:90:99:0,271,3758	1/1:0,87:87:99:3633,262,0	0/0:183,0:183:99:0,551,7642	1/1:0,129:129:99:5387,388,0	0/0:144,0:144:99:0,433,6013	0/0:144,0:144:99:0,433,6013	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	0/0:158,0:158:99:0,476,6598	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:163,0:163:99:0,491,6807	0/0:152,0:152:99:0,458,6348	1/1:0,86:86:99:3591,259,0	0/0:179,0:179:99:0,539,7475
gi|293339394|gb|GU595196.1|	82944	.	A	C	9229.05	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.870;DP=3140;Dels=0.00;FS=0.510;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.102;QD=41.76;ReadPosRankSum=0.131;SB=-4551.90	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:100,0:100:99:0,301,4176	0/0:143,0:143:99:0,430,5972	0/0:99,0:99:99:0,298,4134	0/0:91,0:91:99:0,274,3800	0/0:159,0:159:99:0,479,6640	0/0:118,0:118:99:0,355,4928	0/0:151,0:151:99:0,455,6306	0/0:160,0:160:99:0,482,6682	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:155,0:155:99:0,467,6473	0/0:152,0:152:99:0,458,6348	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:73,0:73:99:0,220,3049	1/1:0,221:221:99:9229,665,0
gi|293339394|gb|GU595196.1|	82955	.	G	T	10356.58	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.859;DP=3174;Dels=0.00;FS=8.375;HRun=0;HaplotypeScore=11.8079;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.912;QD=41.76;ReadPosRankSum=2.622;SB=-4551.90	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	1/1:0,105:105:99:4385,316,0	1/1:0,143:143:99:5972,430,0	0/0:101,0:101:99:0,304,4218	0/0:83,0:83:99:0,250,3466	0/0:167,0:167:99:0,503,6974	0/0:121,0:121:99:0,364,5053	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:136,0:136:99:0,409,5679	0/0:144,0:144:99:0,433,6013	0/0:179,0:179:99:0,539,7475	0/0:186,0:186:99:0,560,7767	0/0:73,0:73:99:0,220,3049	0/0:216,0:216:99:0,650,9020
gi|293339394|gb|GU595196.1|	82957	.	A	G	31111.47	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.694;DP=3163;Dels=0.00;FS=1.139;HRun=0;HaplotypeScore=11.3318;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.731;QD=41.76;ReadPosRankSum=2.774;SB=-15075.50	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	1/1:0,104:104:99:4343,313,0	1/1:0,142:142:99:5930,427,0	0/0:99,0:99:99:0,298,4134	1/1:0,84:84:99:3508,253,0	0/0:166,0:166:99:0,500,6932	1/1:0,121:121:99:5053,364,0	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:179,0:179:99:0,539,7475	0/0:169,0:169:99:0,509,7057	0/0:140,0:140:99:0,421,5846	0/0:151,0:151:99:0,455,6306	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	1/1:0,76:76:99:3174,229,0	1/1:0,218:218:99:9104,656,0
gi|293339394|gb|GU595196.1|	83185	.	C	T	2210.33	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.822;DP=2613;Dels=0.00;FS=45.216;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.693;QD=40.19;ReadPosRankSum=-5.361;SB=-542.90	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:183,0:183:99:0,551,7642	0/0:118,0:118:99:0,355,4928	0/0:166,0:166:99:0,500,6932	0/0:93,0:93:99:0,280,3884	1/1:0,22:22:66.22:919,66,0	0/0:172,0:172:99:0,518,7183	1/1:0,33:33:99:1378,99,0	0/0:170,0:170:99:0,512,7099	0/0:67,0:67:99:0,202,2798	0/0:161,0:161:99:0,485,6723	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:68,0:68:99:0,205,2840	0/0:47,0:47:99:0,141,1963	0/0:50,0:50:99:0,151,2088	0/0:152,0:152:99:0,458,6348	0/0:163,0:163:99:0,491,6807	0/0:90,0:90:99:0,271,3758	0/0:180,0:180:99:0,542,7517
gi|293339394|gb|GU595196.1|	83192	.	G	A	976.66	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.899;DP=2544;Dels=0.00;FS=0.000;HRun=3;HaplotypeScore=5.7135;InbreedingCoeff=-0.1053;MQ=254.00;MQ0=0;MQRankSum=-0.293;QD=5.49;ReadPosRankSum=-9.220;SB=-498.84	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:170,0:170:99:0,512,7099	0/0:111,0:111:99:0,334,4635	0/0:161,0:161:99:0,485,6723	0/0:91,0:91:99:0,274,3800	0/0:29,0:29:87.29:0,87,1211	0/0:159,0:159:99:0,479,6640	0/0:34,0:34:99:0,102,1420	0/0:181,0:181:99:0,545,7559	0/1:48,6:54:88.02:88,0,1842	0/0:160,0:160:99:0,482,6682	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	0/1:44,13:57:99:371,0,1666	0/1:26,12:38:99:387,0,971	0/1:22,7:29:99:205,0,831	0/0:157,0:157:99:0,473,6556	0/0:174,0:174:99:0,524,7266	0/0:93,0:93:99:0,280,3884	0/0:172,0:172:99:0,518,7183
gi|293339394|gb|GU595196.1|	83194	.	A	G	1895.39	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.414;DP=2552;Dels=0.00;FS=0.475;HRun=2;HaplotypeScore=6.7610;InbreedingCoeff=-0.1053;MQ=254.00;MQ0=0;MQRankSum=2.156;QD=10.65;ReadPosRankSum=-10.077;SB=-910.44	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:112,0:112:99:0,337,4677	0/0:165,0:165:99:0,497,6890	0/0:95,0:95:99:0,286,3967	0/0:29,0:29:87.29:0,87,1211	0/0:162,0:162:99:0,488,6765	0/0:32,0:32:96.32:0,96,1336	0/0:181,0:181:99:0,545,7559	0/1:37,10:47:99:276,0,1404	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:182,0:182:99:0,548,7600	0/1:41,15:56:99:458,0,1544	0/1:24,24:48:99:858,0,858	0/1:16,11:27:99:378,0,587	0/0:155,0:155:99:0,467,6473	0/0:174,0:174:99:0,524,7266	0/0:90,0:90:99:0,271,3758	0/0:170,0:170:99:0,512,7099
gi|293339394|gb|GU595196.1|	83197	.	A	G	2085.05	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.392;DP=2572;Dels=0.00;FS=31.956;HRun=0;HaplotypeScore=6.6658;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.731;QD=40.10;ReadPosRankSum=-5.137;SB=-626.42	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:110,0:110:99:0,331,4594	0/0:164,0:164:99:0,494,6849	0/0:95,0:95:99:0,286,3967	1/1:0,25:25:75.25:1044,75,0	0/0:163,0:163:99:0,491,6807	1/1:0,27:27:81.27:1128,81,0	0/0:173,0:173:99:0,521,7225	0/0:49,0:49:99:0,147,2046	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:186,0:186:99:0,560,7767	0/0:52,0:52:99:0,157,2172	0/0:54,0:54:99:0,163,2255	0/0:27,0:27:81.27:0,81,1128	0/0:154,0:154:99:0,464,6431	0/0:177,0:177:99:0,533,7392	0/0:96,0:96:99:0,289,4009	0/0:167,0:167:99:0,503,6974
gi|293339394|gb|GU595196.1|	83201	.	A	C,G	2793.43	.	AC=4,4;AF=0.095,0.095;AN=42;BaseQRankSum=0.191;DP=2570;Dels=0.00;FS=13.633;HaplotypeScore=2.0950;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.080;QD=11.17;ReadPosRankSum=-7.644;SB=-1151.97	GT:AD:DP:GQ:PL	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	0/0:108,0,0:108:99:0,325,4510,325,4510,4510	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:92,0,0:92:99:0,277,3842,277,3842,3842	2/2:0,0,25:25:75.25:1044,1044,1044,75,75,0	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	2/2:0,0,32:32:96.32:1336,1336,1336,96,96,0	0/0:178,0,0:178:99:0,536,7433,536,7433,7433	0/1:40,8,0:48:99:190,0,1526,310,1550,1860	0/0:169,0,0:169:99:0,509,7057,509,7057,7057	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	0/0:182,0,0:182:99:0,548,7600,548,7600,7600	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/1:39,12,0:51:99:348,0,1475,465,1511,1976	0/1:58,6,0:64:57.92:58,0,2229,233,2248,2480	0/1:25,5,0:30:99:119,0,954,194,969,1163	0/0:146,0,0:146:99:0,439,6097,439,6097,6097	0/0:186,0,0:186:99:0,560,7767,560,7767,7767	0/0:89,0,0:89:99:0,268,3717,268,3717,3717	0/0:170,0,0:170:99:0,512,7099,512,7099,7099
gi|293339394|gb|GU595196.1|	83202	.	C	G	53.87	.	AC=1;AF=0.024;AN=42;BaseQRankSum=0.285;DP=2585;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=6.0468;InbreedingCoeff=-0.0268;MQ=254.00;MQ0=0;MQRankSum=0.525;QD=1.06;ReadPosRankSum=-6.070;SB=-23.17	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	0/0:109,0:109:99:0,328,4552	0/0:169,0:169:99:0,509,7057	0/0:96,0:96:99:0,289,4009	0/0:25,0:25:75.25:0,75,1044	0/0:163,0:163:99:0,491,6807	0/0:32,0:32:96.32:0,96,1336	0/0:178,0:178:99:0,536,7433	0/0:44,2:46:54.94:0,55,1754	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	0/0:185,0:185:99:0,557,7726	0/0:176,0:176:99:0,530,7350	0/1:45,6:51:97.05:97,0,1726	0/0:60,3:63:64.35:0,64,2380	0/0:29,2:31:9.79:0,10,1128	0/0:147,0:147:99:0,442,6139	0/0:187,0:187:99:0,563,7809	0/0:90,0:90:99:0,271,3758	0/0:170,0:170:99:0,512,7099
gi|293339394|gb|GU595196.1|	83245	.	T	C	22091.24	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.448;DP=3312;Dels=0.00;FS=5.270;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.026;QD=41.76;ReadPosRankSum=0.972;SB=-10398.34	GT:AD:DP:GQ:PL	0/0:194,0:194:99:0,584,8102	0/0:170,0:170:99:0,512,7099	1/1:0,116:116:99:4844,349,0	1/1:0,181:181:99:7559,545,0	0/0:106,0:106:99:0,319,4427	1/1:0,103:103:99:4301,310,0	0/0:185,0:185:99:0,557,7726	1/1:0,129:129:99:5387,388,0	0/0:156,0:156:99:0,470,6515	0/0:182,0:182:99:0,548,7600	0/0:166,0:166:99:0,500,6932	0/0:145,0:145:99:0,436,6055	0/0:185,0:185:99:0,557,7726	0/0:159,0:159:99:0,479,6640	0/0:164,0:164:99:0,494,6849	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:93,0:93:99:0,280,3884	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	83296	.	A	C	6097.03	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.377;DP=3161;Dels=0.00;FS=6.913;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.307;QD=41.76;ReadPosRankSum=2.344;SB=-2672.68	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:126,0:126:99:0,379,5262	0/0:165,0:165:99:0,497,6890	0/0:88,0:88:99:0,265,3675	1/1:0,57:57:99:2380,172,0	0/0:179,0:179:99:0,539,7475	1/1:0,89:89:99:3717,268,0	0/0:162,0:162:99:0,488,6765	0/0:189,0:189:99:0,569,7893	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:151,0:151:99:0,455,6306	0/0:191,0:191:99:0,575,7976	0/0:145,0:145:99:0,436,6055	0/0:166,0:166:99:0,500,6932	0/0:154,0:154:99:0,464,6431	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	0/0:81,0:81:99:0,244,3383	0/0:206,0:206:99:0,620,8603
gi|293339394|gb|GU595196.1|	83312	.	T	C	5554.14	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.178;DP=3201;Dels=0.00;FS=1.017;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.740;QD=41.76;ReadPosRankSum=-6.396;SB=-2714.44	GT:AD:DP:GQ:PL	0/0:192,0:192:99:0,578,8018	0/0:154,0:154:99:0,464,6431	0/0:126,0:126:99:0,379,5262	0/0:179,0:179:99:0,539,7475	0/0:84,0:84:99:0,253,3508	1/1:0,52:52:99:2172,157,0	0/0:187,0:187:99:0,563,7809	1/1:0,81:81:99:3383,244,0	0/0:164,0:164:99:0,494,6849	0/0:177,0:177:99:0,533,7392	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:161,0:161:99:0,485,6723	0/0:181,0:181:99:0,545,7559	0/0:152,0:152:99:0,458,6348	0/0:168,0:168:99:0,506,7016	0/0:147,0:147:99:0,442,6139	0/0:182,0:182:99:0,548,7600	0/0:158,0:158:99:0,476,6598	0/0:84,0:84:99:0,253,3508	0/0:214,0:214:99:0,644,8937
gi|293339394|gb|GU595196.1|	83323	.	T	C	20044.98	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.553;DP=3112;Dels=0.00;FS=2.326;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.901;QD=41.76;ReadPosRankSum=3.686;SB=-9771.94	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:166,0:166:99:0,500,6932	1/1:0,120:120:99:5011,361,0	1/1:0,184:184:99:7684,554,0	0/0:88,0:88:99:0,265,3675	1/1:0,35:35:99:1462,105,0	0/0:186,0:186:99:0,560,7767	1/1:0,51:51:99:2130,154,0	0/0:164,0:164:99:0,494,6849	0/0:186,0:186:99:0,560,7767	0/0:164,0:164:99:0,494,6849	0/0:185,0:185:99:0,557,7726	0/0:160,0:160:99:0,482,6682	0/0:176,0:176:99:0,530,7350	0/0:141,0:141:99:0,424,5888	0/0:156,0:156:99:0,470,6515	0/0:153,0:153:99:0,461,6389	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	1/1:0,90:90:99:3758,271,0	0/0:199,0:199:99:0,599,8310
gi|293339394|gb|GU595196.1|	83356	.	C	T	832.47	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.307;DP=2977;Dels=0.00;FS=4.063;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9994;MQ=254.00;MQ0=0;MQRankSum=-0.042;QD=37.84;ReadPosRankSum=-3.325;SB=-332.37	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	0/0:127,0:127:99:0,382,5304	0/0:172,0:172:99:0,518,7183	0/0:97,0:97:99:0,292,4051	1/1:0,9:9:27.09:376,27,0	0/0:174,0:174:99:0,524,7266	1/1:0,13:13:39.13:543,39,0	0/0:154,0:154:99:0,464,6431	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:182,0:182:99:0,548,7600	0/0:153,0:153:99:0,461,6389	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:144,0:144:99:0,433,6013	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:86,0:86:99:0,259,3591	0/0:160,0:160:99:0,482,6682
gi|293339394|gb|GU595196.1|	83386	.	A	G	3883.73	.	AC=2;AF=0.053;AN=38;BaseQRankSum=0.607;DP=2946;Dels=0.00;FS=1.711;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.644;QD=41.76;ReadPosRankSum=-0.725;SB=-1920.99	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:166,0:166:99:0,500,6932	0/0:124,0:124:99:0,373,5178	0/0:157,0:157:99:0,473,6556	0/0:83,0:83:99:0,250,3466	./.	0/0:172,0:172:99:0,518,7183	./.	0/0:172,0:172:99:0,518,7183	0/0:139,0:139:99:0,418,5805	0/0:187,0:187:99:0,563,7809	0/0:176,0:176:99:0,530,7350	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:129,0:129:99:0,388,5387	0/0:154,0:154:99:0,464,6431	0/0:149,0:149:99:0,448,6222	0/0:179,0:179:99:0,539,7475	0/0:171,0:171:99:0,515,7141	1/1:0,93:93:99:3884,280,0	0/0:151,0:151:99:0,455,6306
gi|293339394|gb|GU595196.1|	83410	.	A	G	500.12	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.119;DP=3003;Dels=0.00;FS=7.259;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9946;MQ=254.00;MQ0=0;MQRankSum=-0.623;QD=35.72;ReadPosRankSum=-6.025;SB=-163.41	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	0/0:124,0:124:99:0,373,5178	0/0:159,0:159:99:0,479,6640	0/0:85,0:85:99:0,256,3550	1/1:0,6:6:18.06:251,18,0	0/0:191,0:191:99:0,575,7976	1/1:0,8:8:24.08:334,24,0	0/0:175,0:175:99:0,527,7308	0/0:137,0:137:99:0,412,5721	0/0:185,0:185:99:0,557,7726	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	0/0:164,0:164:99:0,494,6849	0/0:134,0:134:99:0,403,5596	0/0:146,0:146:99:0,439,6097	0/0:156,0:156:99:0,470,6515	0/0:198,0:198:99:0,596,8269	0/0:193,0:193:99:0,581,8060	0/0:88,0:88:99:0,265,3675	0/0:168,0:168:99:0,506,7016
gi|293339394|gb|GU595196.1|	83431	.	C	T	4050.77	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.487;DP=3084;Dels=0.00;FS=6.657;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.967;QD=41.76;ReadPosRankSum=-1.534;SB=-1670.43	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:179,0:179:99:0,539,7475	0/0:120,0:120:99:0,361,5011	0/0:170,0:170:99:0,512,7099	0/0:95,0:95:99:0,286,3967	1/1:0,34:34:99:1420,102,0	0/0:179,0:179:99:0,539,7475	1/1:0,63:63:99:2631,190,0	0/0:162,0:162:99:0,488,6765	0/0:148,0:148:99:0,445,6181	0/0:188,0:188:99:0,566,7851	0/0:164,0:164:99:0,494,6849	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:136,0:136:99:0,409,5679	0/0:156,0:156:99:0,470,6515	0/0:184,0:184:99:0,554,7684	0/0:172,0:172:99:0,518,7183	0/0:83,0:83:99:0,250,3466	0/0:173,0:173:99:0,521,7225
gi|293339394|gb|GU595196.1|	83486	.	A	G	35036.94	.	AC=12;AF=0.286;AN=42;BaseQRankSum=3.272;DP=3276;Dels=0.00;FS=0.141;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.706;QD=41.76;ReadPosRankSum=0.418;SB=-17163.52	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:148,0:148:99:0,445,6181	1/1:0,124:124:99:5178,373,0	1/1:0,183:183:99:7642,551,0	0/0:90,0:90:99:0,271,3758	1/1:0,94:94:99:3925,283,0	0/0:201,0:201:99:0,605,8394	1/1:0,143:143:99:5972,430,0	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:185,0:185:99:0,557,7726	0/0:184,0:184:99:0,554,7684	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	0/0:140,0:140:99:0,421,5846	0/0:172,0:172:99:0,518,7183	0/0:177,0:177:99:0,533,7392	1/1:0,90:90:99:3758,271,0	1/1:0,205:205:99:8561,617,0
gi|293339394|gb|GU595196.1|	83587	.	T	C	3633.17	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.426;DP=3175;Dels=0.00;FS=62.159;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.154;QD=41.76;ReadPosRankSum=1.852;SB=-835.23	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:172,0:172:99:0,518,7183	0/0:140,0:140:99:0,421,5846	0/0:153,0:153:99:0,461,6389	0/0:95,0:95:99:0,286,3967	1/1:0,37:37:99:1545,111,0	0/0:186,0:186:99:0,560,7767	1/1:0,50:50:99:2088,151,0	0/0:177,0:177:99:0,533,7392	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	0/0:193,0:193:99:0,581,8060	0/0:164,0:164:99:0,494,6849	0/0:163,0:163:99:0,491,6807	0/0:197,0:197:99:0,593,8227	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:97,0:97:99:0,292,4051	0/0:177,0:177:99:0,533,7392
gi|293339394|gb|GU595196.1|	83602	.	G	C	3716.69	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.746;DP=3117;Dels=0.00;FS=32.860;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.085;QD=41.76;ReadPosRankSum=-5.486;SB=-1169.31	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:136,0:136:99:0,409,5679	0/0:157,0:157:99:0,473,6556	0/0:97,0:97:99:0,292,4051	1/1:0,31:31:93.31:1295,93,0	0/0:175,0:175:99:0,527,7308	1/1:0,58:58:99:2422,175,0	0/0:177,0:177:99:0,533,7392	0/0:152,0:152:99:0,458,6348	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:159,0:159:99:0,479,6640	0/0:176,0:176:99:0,530,7350	0/0:152,0:152:99:0,458,6348	0/0:168,0:168:99:0,506,7016	0/0:191,0:191:99:0,575,7976	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:97,0:97:99:0,292,4051	0/0:188,0:188:99:0,566,7851
gi|293339394|gb|GU595196.1|	83617	.	T	A	4259.57	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.019;DP=3144;Dels=0.00;FS=7.189;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.291;QD=41.76;ReadPosRankSum=1.418;SB=-1837.47	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:180,0:180:99:0,542,7517	0/0:129,0:129:99:0,388,5387	0/0:170,0:170:99:0,512,7099	0/0:103,0:103:99:0,310,4301	1/1:0,35:35:99:1462,105,0	0/0:178,0:178:99:0,536,7433	1/1:0,67:67:99:2798,202,0	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:158,0:158:99:0,476,6598	0/0:155,0:155:99:0,467,6473	0/0:149,0:149:99:0,448,6222	0/0:178,0:178:99:0,536,7433	0/0:183,0:183:99:0,551,7642	0/0:175,0:175:99:0,527,7308	0/0:157,0:157:99:0,473,6556	0/0:74,0:74:99:0,223,3090	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	83635	.	C	A	2819.12	.	AC=2;AF=0.048;AN=42;BaseQRankSum=2.231;DP=3240;Dels=0.00;FS=34.567;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.905;QD=40.86;ReadPosRankSum=-1.080;SB=-835.23	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:168,0:168:99:0,506,7016	0/0:125,0:125:99:0,376,5220	0/0:178,0:178:99:0,536,7433	0/0:105,0:105:99:0,316,4385	0/0:60,0:60:99:0,181,2506	0/0:173,0:173:99:0,521,7225	0/0:112,0:112:99:0,337,4677	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	0/0:157,0:157:99:0,473,6556	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	0/0:153,0:153:99:0,461,6389	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:179,0:179:99:0,539,7475	0/0:183,0:183:99:0,551,7642	1/1:0,69:69:99:2881,208,0	0/0:213,0:213:99:0,641,8895
gi|293339394|gb|GU595196.1|	83656	.	C	T	9354.33	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.295;DP=3319;Dels=0.00;FS=3.102;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.268;QD=41.76;ReadPosRankSum=-0.884;SB=-4426.61	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:179,0:179:99:0,539,7475	0/0:114,0:114:99:0,343,4761	0/0:167,0:167:99:0,503,6974	0/0:91,0:91:99:0,274,3800	1/1:0,86:86:99:3591,259,0	0/0:161,0:161:99:0,485,6723	1/1:0,138:138:99:5763,415,0	0/0:170,0:170:99:0,512,7099	0/0:185,0:185:99:0,557,7726	0/0:187,0:187:99:0,563,7809	0/0:183,0:183:99:0,551,7642	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:178,0:178:99:0,536,7433	0/0:161,0:161:99:0,485,6723	0/0:184,0:184:99:0,554,7684	0/0:70,0:70:99:0,211,2923	0/0:220,0:220:99:0,662,9187
gi|293339394|gb|GU595196.1|	83671	.	G	T	10314.82	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.757;DP=3318;Dels=0.00;FS=4.084;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.073;QD=41.76;ReadPosRankSum=0.950;SB=-4927.74	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:107,0:107:99:0,322,4468	0/0:141,0:141:99:0,424,5888	0/0:85,0:85:99:0,256,3550	1/1:0,102:102:99:4260,307,0	0/0:167,0:167:99:0,503,6974	1/1:0,145:145:99:6055,436,0	0/0:176,0:176:99:0,530,7350	0/0:186,0:186:99:0,560,7767	0/0:190,0:190:99:0,572,7934	0/0:199,0:199:99:0,599,8310	0/0:189,0:189:99:0,569,7893	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:152,0:152:99:0,458,6348	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:78,0:78:99:0,235,3257	0/0:200,0:200:99:0,602,8352
gi|293339394|gb|GU595196.1|	83704	.	G	A	3549.65	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.341;DP=3220;Dels=0.00;FS=1.289;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.163;QD=41.76;ReadPosRankSum=0.301;SB=-1712.19	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:156,0:156:99:0,470,6515	0/0:108,0:108:99:0,325,4510	0/0:127,0:127:99:0,382,5304	0/0:80,0:80:99:0,241,3341	0/0:102,0:102:99:0,307,4260	0/0:180,0:180:99:0,542,7517	0/0:156,0:156:99:0,470,6515	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	0/0:200,0:200:99:0,602,8352	0/0:170,0:170:99:0,512,7099	0/0:179,0:179:99:0,539,7475	0/0:161,0:161:99:0,485,6723	0/0:144,0:144:99:0,433,6013	0/0:178,0:178:99:0,536,7433	0/0:163,0:163:99:0,491,6807	0/0:157,0:157:99:0,473,6556	1/1:0,85:85:99:3550,256,0	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	83708	.	A	G	3507.89	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.878;DP=3246;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.823;QD=41.76;ReadPosRankSum=0.313;SB=-1753.95	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:114,0:114:99:0,343,4761	0/0:132,0:132:99:0,397,5512	0/0:83,0:83:99:0,250,3466	0/0:97,0:97:99:0,292,4051	0/0:177,0:177:99:0,533,7392	0/0:154,0:154:99:0,464,6431	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:178,0:178:99:0,536,7433	0/0:194,0:194:99:0,584,8102	0/0:171,0:171:99:0,515,7141	0/0:187,0:187:99:0,563,7809	0/0:165,0:165:99:0,497,6890	0/0:148,0:148:99:0,445,6181	0/0:185,0:185:99:0,557,7726	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	1/1:0,84:84:99:3508,253,0	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	83731	.	C	T	9897.22	.	AC=4;AF=0.095;AN=42;BaseQRankSum=2.205;DP=3301;Dels=0.00;FS=1.637;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.293;QD=41.76;ReadPosRankSum=-0.737;SB=-4760.70	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:136,0:136:99:0,409,5679	0/0:132,0:132:99:0,397,5512	0/0:106,0:106:99:0,319,4427	1/1:0,87:87:99:3633,262,0	0/0:180,0:180:99:0,542,7517	1/1:0,150:150:99:6264,452,0	0/0:185,0:185:99:0,557,7726	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:183,0:183:99:0,551,7642	0/0:159,0:159:99:0,479,6640	0/0:151,0:151:99:0,455,6306	0/0:193,0:193:99:0,581,8060	0/0:149,0:149:99:0,448,6222	0/0:173,0:173:99:0,521,7225	0/0:77,0:77:99:0,232,3216	0/0:207,0:207:99:0,623,8644
gi|293339394|gb|GU595196.1|	83767	.	C	T	7057.52	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.310;DP=3182;Dels=0.00;FS=3.671;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.779;QD=41.76;ReadPosRankSum=3.504;SB=-3090.28	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:132,0:132:99:0,397,5512	0/0:113,0:113:99:0,340,4719	0/0:111,0:111:99:0,334,4635	1/1:0,69:69:99:2881,208,0	0/0:189,0:189:99:0,569,7893	1/1:0,100:100:99:4176,301,0	0/0:193,0:193:99:0,581,8060	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:150,0:150:99:0,452,6264	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	0/0:75,0:75:99:0,226,3132	0/0:190,0:190:99:0,572,7934
gi|293339394|gb|GU595196.1|	83779	.	T	C	20587.86	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.470;DP=3080;Dels=0.00;FS=29.401;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.385;QD=41.76;ReadPosRankSum=0.262;SB=-8226.80	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:181,0:181:99:0,545,7559	1/1:0,121:121:99:5053,364,0	1/1:0,117:117:99:4886,352,0	0/0:112,0:112:99:0,337,4677	0/0:54,0:54:99:0,163,2255	0/0:159,0:159:99:0,479,6640	0/0:69,0:69:99:0,208,2881	0/0:195,0:195:99:0,587,8143	0/0:153,0:153:99:0,461,6389	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:152,0:152:99:0,458,6348	1/1:0,74:74:99:3090,223,0	1/1:0,181:181:99:7559,545,0
gi|293339394|gb|GU595196.1|	83800	.	C	T	1416.91	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.049;DP=2913;Dels=0.00;FS=1.306;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.773;QD=39.36;ReadPosRankSum=-6.176;SB=-661.93	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:95,0:95:99:0,286,3967	0/0:129,0:129:99:0,388,5387	0/0:111,0:111:99:0,334,4635	1/1:0,24:24:72.24:1002,72,0	0/0:139,0:139:99:0,418,5805	1/1:0,12:12:36.12:501,36,0	0/0:182,0:182:99:0,548,7600	0/0:154,0:154:99:0,464,6431	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:161,0:161:99:0,485,6723	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:151,0:151:99:0,455,6306	0/0:144,0:144:99:0,433,6013	0/0:63,0:63:99:0,190,2631	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	83812	.	G	C	1918	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.592;DP=2961;Dels=0.00;FS=36.652;HRun=1;HaplotypeScore=4.5708;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.005;QD=39.96;ReadPosRankSum=-6.446;SB=-417.62	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:186,0:186:99:0,560,7767	0/0:87,0:87:99:0,262,3633	0/0:152,0:152:99:0,458,6348	0/0:109,0:109:99:0,328,4552	1/1:0,23:23:69.23:960,69,0	0/0:121,0:121:99:0,364,5053	1/1:0,25:25:75.25:1044,75,0	0/0:179,0:179:99:0,539,7475	0/0:156,0:156:99:0,470,6515	0/0:182,0:182:99:0,548,7600	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:183,0:183:99:0,551,7642	0/0:169,0:169:99:0,509,7057	0/0:156,0:156:99:0,470,6515	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:140,0:140:99:0,421,5846	0/0:64,0:64:99:0,193,2673	0/0:186,0:186:99:0,560,7767
gi|293339394|gb|GU595196.1|	83815	.	T	C	2252.09	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.813;DP=2949;Dels=0.00;FS=39.521;HRun=0;HaplotypeScore=4.9517;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.116;QD=40.22;ReadPosRankSum=-5.127;SB=-501.14	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:90,0:90:99:0,271,3758	0/0:151,0:151:99:0,455,6306	0/0:111,0:111:99:0,334,4635	1/1:0,24:24:72.24:1002,72,0	0/0:119,0:119:99:0,358,4969	1/1:0,32:32:96.32:1336,96,0	0/0:178,0:178:99:0,536,7433	0/0:154,0:154:99:0,464,6431	0/0:180,0:180:99:0,542,7517	0/0:158,0:158:99:0,476,6598	0/0:169,0:169:99:0,509,7057	0/0:180,0:180:99:0,542,7517	0/0:164,0:164:99:0,494,6849	0/0:153,0:153:99:0,461,6389	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:146,0:146:99:0,439,6097	0/0:63,0:63:99:0,190,2631	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	83821	.	G	A	12277.56	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.637;DP=2989;Dels=0.00;FS=127.139;HRun=1;HaplotypeScore=4.9517;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.376;QD=41.76;ReadPosRankSum=0.910;SB=-3257.32	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:194,0:194:99:0,584,8102	1/1:0,88:88:99:3675,265,0	1/1:0,149:149:99:6222,448,0	0/0:112,0:112:99:0,337,4677	0/0:31,0:31:93.31:0,93,1295	0/0:129,0:129:99:0,388,5387	0/0:50,0:50:99:0,151,2088	0/0:169,0:169:99:0,509,7057	0/0:152,0:152:99:0,458,6348	0/0:180,0:180:99:0,542,7517	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	0/0:153,0:153:99:0,461,6389	0/0:180,0:180:99:0,542,7517	0/0:163,0:163:99:0,491,6807	0/0:147,0:147:99:0,442,6139	1/1:0,57:57:99:2380,172,0	0/0:180,0:180:99:0,542,7517
gi|293339394|gb|GU595196.1|	83857	.	G	A	1315.75	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.046;DP=2974;Dels=0.00;FS=37.640;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.009;QD=39.87;ReadPosRankSum=0.284;SB=-208.82	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:156,0:156:99:0,470,6515	0/0:55,0:55:99:0,166,2297	0/0:91,0:91:99:0,274,3800	0/0:106,0:106:99:0,319,4427	0/0:59,0:59:99:0,178,2464	0/0:172,0:172:99:0,518,7183	0/0:113,0:113:99:0,340,4719	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:154,0:154:99:0,464,6431	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:182,0:182:99:0,548,7600	0/0:155,0:155:99:0,467,6473	0/0:163,0:163:99:0,491,6807	1/1:0,33:33:99:1378,99,0	0/0:184,0:184:99:0,554,7684
gi|293339394|gb|GU595196.1|	83871	.	G	A	19376.81	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.553;DP=2910;Dels=0.00;FS=139.604;HRun=0;HaplotypeScore=2.3330;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.388;QD=41.76;ReadPosRankSum=-1.755;SB=-5762.94	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:156,0:156:99:0,470,6515	1/1:0,31:31:93.31:1295,93,0	1/1:0,55:55:99:2297,166,0	0/0:102,0:102:99:0,307,4260	1/1:0,56:56:99:2339,169,0	0/0:180,0:180:99:0,542,7517	1/1:0,96:96:99:4009,289,0	0/0:182,0:182:99:0,548,7600	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:186,0:186:99:0,560,7767	0/0:154,0:154:99:0,464,6431	0/0:152,0:152:99:0,458,6348	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:148,0:148:99:0,445,6181	0/0:176,0:176:99:0,530,7350	1/1:0,20:20:60.20:835,60,0	1/1:0,206:206:99:8603,620,0
gi|293339394|gb|GU595196.1|	83880	.	C	A	3967.25	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.987;DP=2976;Dels=0.00;FS=36.642;HRun=0;HaplotypeScore=4.5232;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.412;QD=41.76;ReadPosRankSum=-8.793;SB=-1085.79	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:164,0:164:99:0,494,6849	1/1:0,43:43:99:1796,129,0	1/1:0,52:52:99:2172,157,0	0/0:103,0:103:99:0,310,4301	0/0:51,0:51:99:0,154,2130	0/0:184,0:184:99:0,554,7684	0/0:93,0:93:99:0,280,3884	0/0:187,0:187:99:0,563,7809	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:204,0:204:99:0,614,8519	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:140,0:140:99:0,421,5846	0/0:189,0:189:99:0,569,7893	0/0:19,0:19:57.19:0,57,793	0/0:200,0:200:99:0,602,8352
gi|293339394|gb|GU595196.1|	83893	.	C	A	11484.11	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.380;DP=2977;Dels=0.00;FS=235.259;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.382;QD=41.76;ReadPosRankSum=-2.889;SB=-2088.04	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:172,0:172:99:0,518,7183	1/1:0,61:61:99:2547,184,0	1/1:0,61:61:99:2547,184,0	0/0:98,0:98:99:0,295,4093	1/1:0,55:55:99:2297,166,0	0/0:189,0:189:99:0,569,7893	1/1:0,74:74:99:3090,223,0	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:166,0:166:99:0,500,6932	0/0:210,0:210:99:0,632,8770	0/0:167,0:167:99:0,503,6974	0/0:155,0:155:99:0,467,6473	0/0:153,0:153:99:0,461,6389	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:138,0:138:99:0,415,5763	0/0:188,0:188:99:0,566,7851	1/1:0,24:24:72.24:1002,72,0	0/0:195,0:195:99:0,587,8143
gi|293339394|gb|GU595196.1|	83912	.	G	A	1524.55	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.159;DP=3068;Dels=0.00;FS=101.615;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.936;QD=40.12;ReadPosRankSum=2.445;SB=-0.02	GT:AD:DP:GQ:PL	0/0:212,0:212:99:0,638,8853	0/0:163,0:163:99:0,491,6807	0/0:88,0:88:99:0,265,3675	0/0:122,0:122:99:0,367,5095	0/0:95,0:95:99:0,286,3967	0/0:44,0:44:99:0,132,1837	0/0:171,0:171:99:0,515,7141	0/0:77,0:77:99:0,232,3216	0/0:180,0:180:99:0,542,7517	0/0:183,0:183:99:0,551,7642	0/0:153,0:153:99:0,461,6389	0/0:198,0:198:99:0,596,8269	0/0:178,0:178:99:0,536,7433	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:150,0:150:99:0,452,6264	0/0:165,0:165:99:0,497,6890	0/0:149,0:149:99:0,448,6222	0/0:173,0:173:99:0,521,7225	1/1:0,38:38:99:1587,114,0	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	83971	.	G	T	16704.15	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.487;DP=3113;Dels=0.00;FS=90.972;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.650;QD=41.76;ReadPosRankSum=1.611;SB=-5637.66	GT:AD:DP:GQ:PL	0/0:192,0:192:99:0,578,8018	0/0:150,0:150:99:0,452,6264	1/1:0,127:127:99:5304,382,0	1/1:0,146:146:99:6097,439,0	0/0:106,0:106:99:0,319,4427	1/1:0,32:32:96.32:1336,96,0	0/0:184,0:184:99:0,554,7684	1/1:0,58:58:99:2422,175,0	0/0:197,0:197:99:0,593,8227	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:184,0:184:99:0,554,7684	0/0:150,0:150:99:0,452,6264	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	1/1:0,37:37:99:1545,111,0	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	84016	.	A	G	60.58	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.103;DP=2664;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.1428;InbreedingCoeff=0.8312;MQ=254.00;MQ0=0;MQRankSum=0.451;QD=20.19;ReadPosRankSum=-2.903;SB=-38.96	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	0/0:93,0:93:99:0,280,3884	0/0:18,0:18:54.18:0,54,752	0/0:180,0:180:99:0,542,7517	0/0:8,0:8:24.08:0,24,334	0/0:160,0:160:99:0,482,6682	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:157,0:157:99:0,473,6556	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:159,0:159:99:0,479,6640	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	0/0:160,0:160:99:0,482,6682	0/0:155,0:155:99:0,467,6473	0/0:15,0:15:45.15:0,45,626	0/0:177,0:177:99:0,533,7392
gi|293339394|gb|GU595196.1|	84023	.	T	C	942.91	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-2.970;DP=2639;Dels=0.00;FS=76.967;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9961;MQ=254.00;MQ0=0;MQRankSum=0.427;QD=37.72;ReadPosRankSum=-4.845;SB=-0.02	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	./.	./.	0/0:97,0:97:99:0,292,4051	1/1:0,11:11:33.11:459,33,0	0/0:182,0:182:99:0,548,7600	1/1:0,6:6:18.06:251,18,0	0/0:156,0:156:99:0,470,6515	0/0:166,0:166:99:0,500,6932	0/0:182,0:182:99:0,548,7600	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:156,0:156:99:0,470,6515	0/0:166,0:166:99:0,500,6932	0/0:157,0:157:99:0,473,6556	0/0:153,0:153:99:0,461,6389	1/1:0,8:8:24.08:334,24,0	0/0:178,0:178:99:0,536,7433
gi|293339394|gb|GU595196.1|	84029	.	G	T	408.11	.	AC=6;AF=0.158;AN=38;BaseQRankSum=0.365;DP=2675;Dels=0.00;FS=36.920;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9592;MQ=254.00;MQ0=0;MQRankSum=0.198;QD=34.01;ReadPosRankSum=-5.050;SB=-0.02	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	./.	./.	0/0:105,0:105:99:0,316,4385	1/1:0,5:5:15.05:209,15,0	0/0:171,0:171:99:0,515,7141	1/1:0,3:3:9.03:125,9,0	0/0:166,0:166:99:0,500,6932	0/0:179,0:179:99:0,539,7475	0/0:185,0:185:99:0,557,7726	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:156,0:156:99:0,470,6515	1/1:0,4:4:12.04:167,12,0	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	84101	.	A	G	34.84	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.557;DP=2673;Dels=0.00;FS=3.009;HRun=0;HaplotypeScore=0.1500;InbreedingCoeff=0.7359;MQ=254.00;MQ0=0;MQRankSum=-1.709;QD=17.42;ReadPosRankSum=-2.045;SB=-0.02	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:16,0:16:48.16:0,48,668	0/0:33,0:33:99:0,99,1378	0/0:90,0:90:99:0,271,3758	1/1:0,2:2:6.02:84,6,0	0/0:175,0:175:99:0,527,7308	./.	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:153,0:153:99:0,461,6389	0/0:145,0:145:99:0,436,6055	0/0:170,0:170:99:0,512,7099	0/0:1,0:1:3.01:0,3,42	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	84105	.	T	A	2586.75	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.925;DP=2694;Dels=0.00;FS=1.521;HRun=5;HaplotypeScore=0.1428;InbreedingCoeff=0.8812;MQ=254.00;MQ0=0;MQRankSum=0.756;QD=40.42;ReadPosRankSum=-3.446;SB=-1211.06	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	1/1:0,24:24:72.24:1002,72,0	1/1:0,40:40:99:1670,120,0	0/0:89,0:89:99:0,268,3717	0/0:3,0:3:9.03:0,9,125	0/0:171,0:171:99:0,515,7141	0/0:1,0:1:3.01:0,3,42	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	0/0:140,0:140:99:0,421,5846	0/0:174,0:174:99:0,524,7266	0/0:5,0:5:15.05:0,15,209	0/0:202,0:202:99:0,608,8436
gi|293339394|gb|GU595196.1|	84129	.	C	T	5888.23	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.440;DP=2889;Dels=0.00;FS=9.184;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9798;MQ=254.00;MQ0=0;MQRankSum=1.023;QD=41.76;ReadPosRankSum=3.161;SB=-2586.44	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	1/1:0,61:61:99:2547,184,0	1/1:0,80:80:99:3341,241,0	0/0:90,0:90:99:0,271,3758	0/0:6,0:6:18.06:0,18,251	0/0:185,0:185:99:0,557,7726	0/0:4,0:4:12.04:0,12,167	0/0:184,0:184:99:0,554,7684	0/0:196,0:196:99:0,590,8185	0/0:156,0:156:99:0,470,6515	0/0:191,0:191:99:0,575,7976	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:153,0:153:99:0,461,6389	0/0:160,0:160:99:0,482,6682	0/0:171,0:171:99:0,515,7141	0/0:21,0:21:63.21:0,63,877	0/0:221,0:221:99:0,665,9229
gi|293339394|gb|GU595196.1|	84163	.	G	A	8018	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.021;DP=2950;Dels=0.00;FS=5.800;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9731;MQ=254.00;MQ0=0;MQRankSum=-0.031;QD=41.76;ReadPosRankSum=0.137;SB=-3631.56	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:160,0:160:99:0,482,6682	1/1:0,68:68:99:2840,205,0	1/1:0,90:90:99:3758,271,0	0/0:99,0:99:99:0,298,4134	1/1:0,9:9:27.09:376,27,0	0/0:189,0:189:99:0,569,7893	1/1:0,2:2:6.02:84,6,0	0/0:217,0:217:99:0,653,9062	0/0:187,0:187:99:0,563,7809	0/0:148,0:148:99:0,445,6181	0/0:166,0:166:99:0,500,6932	0/0:178,0:178:99:0,536,7433	0/0:184,0:184:99:0,554,7684	0/0:165,0:165:99:0,497,6890	0/0:157,0:157:99:0,473,6556	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	1/1:0,23:23:69.23:960,69,0	0/0:232,0:232:99:0,698,9688
gi|293339394|gb|GU595196.1|	84186	.	C	T	786.46	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.333;DP=2852;Dels=0.00;FS=64.185;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9078;MQ=254.00;MQ0=0;MQRankSum=0.157;QD=37.45;ReadPosRankSum=-1.756;SB=-0.02	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:156,0:156:99:0,470,6515	0/0:63,0:63:99:0,190,2631	0/0:90,0:90:99:0,271,3758	0/0:101,0:101:99:0,304,4218	1/1:0,3:3:9.03:125,9,0	0/0:185,0:185:99:0,557,7726	1/1:0,1:1:3.01:42,3,0	0/0:204,0:204:99:0,614,8519	0/0:157,0:157:99:0,473,6556	0/0:174,0:174:99:0,524,7266	0/0:141,0:141:99:0,424,5888	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:176,0:176:99:0,530,7350	0/0:154,0:154:99:0,464,6431	0/0:162,0:162:99:0,488,6765	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	1/1:0,17:17:51.17:710,51,0	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	84201	.	T	C	564.95	.	AC=2;AF=0.053;AN=38;BaseQRankSum=0.138;DP=2800;Dels=0.00;FS=46.689;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.101;QD=37.66;ReadPosRankSum=-1.025;SB=-0.02	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:172,0:172:99:0,518,7183	0/0:60,0:60:99:0,181,2506	0/0:88,0:88:99:0,265,3675	0/0:99,0:99:99:0,298,4134	./.	0/0:189,0:189:99:0,569,7893	./.	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:164,0:164:99:0,494,6849	0/0:137,0:137:99:0,412,5721	0/0:146,0:146:99:0,439,6097	0/0:166,0:166:99:0,500,6932	0/0:181,0:181:99:0,545,7559	0/0:155,0:155:99:0,467,6473	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/0:160,0:160:99:0,482,6682	1/1:0,15:15:45.15:626,45,0	0/0:181,0:181:99:0,545,7559
gi|293339394|gb|GU595196.1|	84249	.	G	A	138.67	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.075;DP=2888;Dels=0.00;FS=15.677;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9075;MQ=254.00;MQ0=0;MQRankSum=0.594;QD=27.73;ReadPosRankSum=2.374;SB=0.22	GT:AD:DP:GQ:PL	0/0:198,0:198:99:0,596,8269	0/0:179,0:179:99:0,539,7475	0/0:47,0:47:99:0,141,1963	0/0:77,0:77:99:0,232,3216	0/0:91,0:91:99:0,274,3800	1/1:0,2:2:6.02:84,6,0	0/0:187,0:187:99:0,563,7809	1/1:0,3:3:9.03:125,9,0	0/0:155,0:155:99:0,467,6473	0/0:159,0:159:99:0,479,6640	0/0:202,0:202:99:0,608,8436	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:40,0:40:99:0,120,1670	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	84267	.	G	T	585.90	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.478;DP=2890;Dels=0.00;FS=52.121;HRun=0;HaplotypeScore=0.7618;InbreedingCoeff=0.9835;MQ=254.00;MQ0=0;MQRankSum=1.306;QD=36.62;ReadPosRankSum=-1.471;SB=-0.01	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:179,0:179:99:0,539,7475	0/0:50,0:50:99:0,151,2088	0/0:89,0:89:99:0,268,3717	0/0:92,0:92:99:0,277,3842	1/1:0,12:12:36.12:501,36,0	0/0:179,0:179:99:0,539,7475	1/1:0,4:4:12.04:167,12,0	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:197,0:197:99:0,593,8227	0/0:168,0:168:99:0,506,7016	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:141,0:141:99:0,424,5888	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:43,0:43:99:0,129,1796	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	84276	.	A	G	8018	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.912;DP=2892;Dels=0.00;FS=90.902;HRun=1;HaplotypeScore=2.6663;InbreedingCoeff=0.9885;MQ=254.00;MQ0=0;MQRankSum=-0.501;QD=41.76;ReadPosRankSum=0.979;SB=-2127.10	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:190,0:190:99:0,572,7934	1/1:0,58:58:99:2422,175,0	1/1:0,89:89:99:3717,268,0	0/0:99,0:99:99:0,298,4134	0/0:10,0:10:30.10:0,30,418	0/0:170,0:170:99:0,512,7099	0/0:4,0:4:12.04:0,12,167	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:187,0:187:99:0,563,7809	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	0/0:174,0:174:99:0,524,7266	0/0:144,0:144:99:0,433,6013	1/1:0,45:45:99:1879,135,0	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	84281	.	A	T	2025.78	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.007;DP=2890;Dels=0.00;FS=46.989;HRun=0;HaplotypeScore=2.9520;InbreedingCoeff=0.9036;MQ=254.00;MQ0=0;MQRankSum=-0.734;QD=40.52;ReadPosRankSum=-0.663;SB=-375.09	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:190,0:190:99:0,572,7934	0/0:69,0:69:99:0,208,2881	0/0:97,0:97:99:0,292,4051	0/0:98,0:98:99:0,295,4093	0/0:10,0:10:30.10:0,30,418	0/0:164,0:164:99:0,494,6849	0/0:2,0:2:6.02:0,6,84	0/0:161,0:161:99:0,485,6723	0/0:198,0:198:99:0,596,8269	0/0:178,0:178:99:0,536,7433	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:161,0:161:99:0,485,6723	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:153,0:153:99:0,461,6389	0/0:167,0:167:99:0,503,6974	0/0:142,0:142:99:0,427,5930	1/1:0,50:50:99:2088,151,0	0/0:182,0:182:99:0,548,7600
gi|293339394|gb|GU595196.1|	84291	.	T	C	423.54	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.979;DP=2912;Dels=0.00;FS=37.422;HRun=0;HaplotypeScore=0.5714;InbreedingCoeff=0.9418;MQ=254.00;MQ0=0;MQRankSum=0.089;QD=35.30;ReadPosRankSum=1.698;SB=-0.02	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:186,0:186:99:0,560,7767	0/0:76,0:76:99:0,229,3174	0/0:107,0:107:99:0,322,4468	0/0:106,0:106:99:0,319,4427	1/1:0,10:10:30.10:418,30,0	0/0:166,0:166:99:0,500,6932	1/1:0,2:2:6.02:84,6,0	0/0:160,0:160:99:0,482,6682	0/0:197,0:197:99:0,593,8227	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:145,0:145:99:0,436,6055	0/0:48,0:48:99:0,144,2004	0/0:174,0:174:99:0,524,7266
gi|293339394|gb|GU595196.1|	84340	.	A	G	3466.13	.	AC=4;AF=0.105;AN=38;BaseQRankSum=-0.299;DP=2855;Dels=0.00;FS=8.270;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.494;QD=41.76;ReadPosRankSum=-6.042;SB=-1503.38	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:171,0:171:99:0,515,7141	1/1:0,26:26:78.26:1086,78,0	1/1:0,57:57:99:2380,172,0	0/0:99,0:99:99:0,298,4134	./.	0/0:169,0:169:99:0,509,7057	./.	0/0:193,0:193:99:0,581,8060	0/0:159,0:159:99:0,479,6640	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	0/0:191,0:191:99:0,575,7976	0/0:195,0:195:99:0,587,8143	0/0:146,0:146:99:0,439,6097	0/0:172,0:172:99:0,518,7183	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:55,0:55:99:0,166,2297	0/0:222,0:222:99:0,668,9271
gi|293339394|gb|GU595196.1|	84354	.	G	T	1530	.	AC=6;AF=0.158;AN=38;BaseQRankSum=1.548;DP=2650;Dels=0.00;FS=1.263;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9852;MQ=254.00;MQ0=0;MQRankSum=-0.297;QD=39.23;ReadPosRankSum=-3.211;SB=-746.30	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:147,0:147:99:0,442,6139	1/1:0,4:4:12.04:167,12,0	1/1:0,6:6:18.06:251,18,0	0/0:93,0:93:99:0,280,3884	./.	0/0:184,0:184:99:0,554,7684	./.	0/0:187,0:187:99:0,563,7809	0/0:150,0:150:99:0,452,6264	0/0:148,0:148:99:0,445,6181	0/0:159,0:159:99:0,479,6640	0/0:179,0:179:99:0,539,7475	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	0/0:160,0:160:99:0,482,6682	0/0:160,0:160:99:0,482,6682	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	1/1:0,29:29:87.29:1211,87,0	0/0:210,0:210:99:0,632,8770
gi|293339394|gb|GU595196.1|	84362	.	A	T	732.97	.	AC=2;AF=0.059;AN=34;BaseQRankSum=0.243;DP=2567;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.141;QD=38.58;ReadPosRankSum=-3.635;SB=-375.59	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:146,0:146:99:0,439,6097	./.	./.	0/0:98,0:98:99:0,295,4093	./.	0/0:190,0:190:99:0,572,7934	./.	0/0:178,0:178:99:0,536,7433	0/0:148,0:148:99:0,445,6181	0/0:144,0:144:99:0,433,6013	0/0:160,0:160:99:0,482,6682	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:152,0:152:99:0,458,6348	0/0:148,0:148:99:0,445,6181	0/0:157,0:157:99:0,473,6556	0/0:159,0:159:99:0,479,6640	1/1:0,19:19:57.19:793,57,0	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	84413	.	A	G	2278.19	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.414;DP=2728;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-1.780;QD=39.97;ReadPosRankSum=-8.888;SB=-1167.81	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:180,0:180:99:0,542,7517	1/1:0,22:22:66.22:919,66,0	1/1:0,24:24:72.24:1002,72,0	0/0:100,0:100:99:0,301,4176	./.	0/0:187,0:187:99:0,563,7809	./.	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:154,0:154:99:0,464,6431	0/0:148,0:148:99:0,445,6181	0/0:157,0:157:99:0,473,6556	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	0/0:155,0:155:99:0,467,6473	0/0:182,0:182:99:0,548,7600	0/0:176,0:176:99:0,530,7350	1/1:0,11:11:33.11:459,33,0	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	84417	.	T	A	3633.17	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.412;DP=2737;Dels=0.00;FS=2.319;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=4.475;QD=41.76;ReadPosRankSum=-8.528;SB=-1670.01	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:184,0:184:99:0,554,7684	1/1:0,36:36:99:1503,108,0	1/1:0,35:35:99:1462,105,0	0/0:102,0:102:99:0,307,4260	./.	0/0:184,0:184:99:0,554,7684	./.	0/0:180,0:180:99:0,542,7517	0/0:176,0:176:99:0,530,7350	0/0:153,0:153:99:0,461,6389	0/0:145,0:145:99:0,436,6055	0/0:157,0:157:99:0,473,6556	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	1/1:0,16:16:48.16:668,48,0	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	84467	.	C	T	11734.67	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.178;DP=2992;Dels=0.00;FS=9.314;HRun=0;HaplotypeScore=1.1051;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.366;QD=41.76;ReadPosRankSum=-2.016;SB=-5387.10	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:167,0:167:99:0,503,6974	1/1:0,45:45:99:1879,135,0	1/1:0,158:158:99:6598,476,0	0/0:108,0:108:99:0,325,4510	./.	0/0:180,0:180:99:0,542,7517	./.	0/0:192,0:192:99:0,578,8018	0/0:162,0:162:99:0,488,6765	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:170,0:170:99:0,512,7099	0/0:182,0:182:99:0,548,7600	0/0:191,0:191:99:0,575,7976	0/0:161,0:161:99:0,485,6723	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	1/1:0,78:78:99:3257,235,0	0/0:174,0:174:99:0,524,7266
gi|293339394|gb|GU595196.1|	84476	.	A	G	1817.75	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-0.520;DP=2956;Dels=0.00;FS=6.313;HRun=1;HaplotypeScore=5.3151;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.077;QD=40.39;ReadPosRankSum=-8.393;SB=-793.47	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:155,0:155:99:0,467,6473	1/1:0,45:45:99:1879,135,0	0/0:151,0:151:99:0,455,6306	0/0:106,0:106:99:0,319,4427	./.	0/0:182,0:182:99:0,548,7600	./.	0/0:182,0:182:99:0,548,7600	0/0:169,0:169:99:0,509,7057	0/0:159,0:159:99:0,479,6640	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:195,0:195:99:0,587,8143	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:150,0:150:99:0,452,6264	0/0:74,0:74:99:0,223,3090	0/0:175,0:175:99:0,527,7308
gi|293339394|gb|GU595196.1|	84482	.	A	G	7475.12	.	AC=4;AF=0.105;AN=38;BaseQRankSum=1.394;DP=2921;Dels=0.00;FS=12.675;HRun=1;HaplotypeScore=1.2630;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.249;QD=41.76;ReadPosRankSum=-0.859;SB=-3257.32	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:156,0:156:99:0,470,6515	1/1:0,32:32:96.32:1336,96,0	1/1:0,147:147:99:6139,442,0	0/0:110,0:110:99:0,331,4594	./.	0/0:169,0:169:99:0,509,7057	./.	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:181,0:181:99:0,545,7559	0/0:186,0:186:99:0,560,7767	0/0:171,0:171:99:0,515,7141	0/0:152,0:152:99:0,458,6348	0/0:79,0:79:99:0,238,3299	0/0:173,0:173:99:0,521,7225
gi|293339394|gb|GU595196.1|	84576	.	T	C	15451.34	.	AC=8;AF=0.211;AN=38;BaseQRankSum=1.356;DP=2754;Dels=0.00;FS=12.405;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.310;QD=41.76;ReadPosRankSum=0.297;SB=-6890.44	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	1/1:0,60:60:99:2506,181,0	1/1:0,86:86:99:3591,259,0	0/0:92,0:92:99:0,277,3842	./.	0/0:200,0:200:99:0,602,8352	./.	0/0:143,0:143:99:0,430,5972	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:141,0:141:99:0,424,5888	0/0:151,0:151:99:0,455,6306	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:152,0:152:99:0,458,6348	0/0:153,0:153:99:0,461,6389	0/0:163,0:163:99:0,491,6807	0/0:175,0:175:99:0,527,7308	1/1:0,25:25:75.25:1044,75,0	1/1:0,199:199:99:8310,599,0
gi|293339394|gb|GU595196.1|	84579	.	T	A,G	15242.54	.	AC=4,8;AF=0.095,0.190;AN=42;BaseQRankSum=0.916;DP=2777;Dels=0.00;FS=10.494;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.345;QD=41.76;ReadPosRankSum=0.247;SB=-6723.36	GT:AD:DP:GQ:PL	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	2/2:0,0,56:56:99:2339,2339,2339,169,169,0	2/2:0,0,78:78:99:3257,3257,3257,235,235,0	0/0:99,0,0:99:99:0,298,4134,298,4134,4134	1/1:0,4,0:4:12.04:167,12,0,167,12,167	0/0:200,0,0:200:99:0,602,8352,602,8352,8352	1/1:0,3,0:3:9.03:125,9,0,125,9,125	0/0:143,0,0:143:99:0,430,5972,430,5972,5972	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:162,0,0:162:99:0,488,6765,488,6765,6765	0/0:151,0,0:151:99:0,455,6306,455,6306,6306	0/0:144,0,0:144:99:0,433,6013,433,6013,6013	0/0:169,0,0:169:99:0,509,7057,509,7057,7057	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	0/0:164,0,0:164:99:0,494,6849,494,6849,6849	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	2/2:0,0,24:24:72.24:1002,1002,1002,72,72,0	2/2:0,0,200:200:99:8352,8352,8352,602,602,0
gi|293339394|gb|GU595196.1|	84591	.	A	C	418.19	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.019;DP=2827;Dels=0.00;FS=32.756;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9894;MQ=254.00;MQ0=0;MQRankSum=0.142;QD=34.85;ReadPosRankSum=-0.334;SB=-0.02	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:44,0:44:99:0,132,1837	0/0:69,0:69:99:0,208,2881	0/0:98,0:98:99:0,295,4093	1/1:0,5:5:15.05:209,15,0	0/0:200,0:200:99:0,602,8352	1/1:0,7:7:21.07:292,21,0	0/0:156,0:156:99:0,470,6515	0/0:167,0:167:99:0,503,6974	0/0:155,0:155:99:0,467,6473	0/0:173,0:173:99:0,521,7225	0/0:149,0:149:99:0,448,6222	0/0:170,0:170:99:0,512,7099	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:25,0:25:75.25:0,75,1044	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	84633	.	C	T	13071	.	AC=12;AF=0.286;AN=42;BaseQRankSum=1.712;DP=2807;Dels=0.00;FS=17.859;HRun=1;HaplotypeScore=5.3326;InbreedingCoeff=0.9929;MQ=254.00;MQ0=0;MQRankSum=-1.376;QD=41.76;ReadPosRankSum=2.375;SB=-5488.44	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	1/1:0,27:27:81.27:1128,81,0	1/1:0,61:61:99:2547,184,0	0/0:88,0:88:99:0,265,3675	1/1:0,4:4:12.04:167,12,0	0/0:182,0:182:99:0,548,7600	1/1:0,9:9:27.09:376,27,0	0/0:185,0:185:99:0,557,7726	0/0:182,0:182:99:0,548,7600	0/0:174,0:174:99:0,524,7266	0/0:153,0:153:99:0,461,6389	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:183,0:183:99:0,551,7642	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	1/1:0,29:29:87.29:1211,87,0	1/1:0,183:183:99:7642,551,0
gi|293339394|gb|GU595196.1|	84634	.	T	G	7934.48	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.768;DP=2797;Dels=0.00;FS=6.396;HRun=0;HaplotypeScore=5.3326;InbreedingCoeff=0.9881;MQ=254.00;MQ0=0;MQRankSum=-0.336;QD=41.76;ReadPosRankSum=3.417;SB=-3716.64	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:25,0:25:75.25:0,75,1044	0/0:62,0:62:99:0,187,2589	0/0:87,0:87:99:0,262,3633	1/1:0,4:4:12.04:167,12,0	0/0:184,0:184:99:0,554,7684	1/1:0,9:9:27.09:376,27,0	0/0:184,0:184:99:0,554,7684	0/0:180,0:180:99:0,542,7517	0/0:178,0:178:99:0,536,7433	0/0:151,0:151:99:0,455,6306	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:178,0:178:99:0,536,7433	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:28,0:28:84.28:0,84,1169	1/1:0,177:177:99:7392,533,0
gi|293339394|gb|GU595196.1|	84657	.	A	G	5679.42	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.674;DP=2722;Dels=0.00;FS=196.815;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9082;MQ=254.00;MQ0=0;MQRankSum=-0.112;QD=41.76;ReadPosRankSum=-0.817;SB=-652.49	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	1/1:0,34:34:99:1420,102,0	1/1:0,62:62:99:2589,187,0	0/0:99,0:99:99:0,298,4134	1/1:0,1:1:3.01:42,3,0	0/0:178,0:178:99:0,536,7433	1/1:0,1:1:3.01:42,3,0	0/0:172,0:172:99:0,518,7183	0/0:188,0:188:99:0,566,7851	0/0:160,0:160:99:0,482,6682	0/0:149,0:149:99:0,448,6222	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	1/1:0,38:38:99:1587,114,0	0/0:132,0:132:99:0,397,5512
gi|293339394|gb|GU595196.1|	84678	.	A	G	2025.94	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.398;DP=2652;Dels=0.00;FS=2.453;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8069;MQ=254.00;MQ0=0;MQRankSum=1.988;QD=40.52;ReadPosRankSum=0.328;SB=-1001.23	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:163,0:163:99:0,491,6807	0/0:34,0:34:99:0,102,1420	0/0:74,0:74:99:0,223,3090	0/0:93,0:93:99:0,280,3884	0/0:1,0:1:3.01:0,3,42	0/0:167,0:167:99:0,503,6974	0/0:3,0:3:9.03:0,9,125	0/0:167,0:167:99:0,503,6974	0/0:190,0:190:99:0,572,7934	0/0:154,0:154:99:0,464,6431	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:191,0:191:99:0,575,7976	0/0:175,0:175:99:0,527,7308	0/0:176,0:176:99:0,530,7350	0/0:147,0:147:99:0,442,6139	0/0:163,0:163:99:0,491,6807	0/0:157,0:157:99:0,473,6556	0/0:37,0:37:99:0,111,1545	1/1:0,50:50:99:2088,151,0
gi|293339394|gb|GU595196.1|	84680	.	A	C	2694.11	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.060;DP=2666;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8069;MQ=254.00;MQ0=0;MQRankSum=0.167;QD=40.82;ReadPosRankSum=-4.509;SB=-1293.98	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:37,0:37:99:0,111,1545	0/0:76,0:76:99:0,229,3174	0/0:98,0:98:99:0,295,4093	0/0:1,0:1:3.01:0,3,42	0/0:168,0:168:99:0,506,7016	0/0:3,0:3:9.03:0,9,125	0/0:163,0:163:99:0,491,6807	0/0:190,0:190:99:0,572,7934	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:188,0:188:99:0,566,7851	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:149,0:149:99:0,448,6222	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:38,0:38:99:0,114,1587	1/1:0,66:66:99:2756,199,0
gi|293339394|gb|GU595196.1|	84699	.	G	A	10022.50	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.764;DP=2709;Dels=0.00;FS=198.853;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9713;MQ=254.00;MQ0=0;MQRankSum=1.154;QD=41.76;ReadPosRankSum=-1.810;SB=-1904.68	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	1/1:0,54:54:99:2255,163,0	1/1:0,87:87:99:3633,262,0	0/0:97,0:97:99:0,292,4051	1/1:0,2:2:6.02:84,6,0	0/0:172,0:172:99:0,518,7183	1/1:0,6:6:18.06:251,18,0	0/0:156,0:156:99:0,470,6515	0/0:182,0:182:99:0,548,7600	0/0:147,0:147:99:0,442,6139	0/0:152,0:152:99:0,458,6348	0/0:176,0:176:99:0,530,7350	0/0:203,0:203:99:0,611,8477	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:143,0:143:99:0,430,5972	0/0:166,0:166:99:0,500,6932	0/0:155,0:155:99:0,467,6473	0/0:35,0:35:99:0,105,1462	1/1:0,91:91:99:3800,274,0
gi|293339394|gb|GU595196.1|	84717	.	C	T	502.49	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.423;DP=2769;Dels=0.00;FS=15.477;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9832;MQ=254.00;MQ0=0;MQRankSum=-1.191;QD=35.89;ReadPosRankSum=0.756;SB=-120.61	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	0/0:55,0:55:99:0,166,2297	0/0:84,0:84:99:0,253,3508	0/0:84,0:84:99:0,253,3508	1/1:0,4:4:12.04:167,12,0	0/0:165,0:165:99:0,497,6890	1/1:0,10:10:30.10:418,30,0	0/0:153,0:153:99:0,461,6389	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:153,0:153:99:0,461,6389	0/0:186,0:186:99:0,560,7767	0/0:185,0:185:99:0,557,7726	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	0/0:175,0:175:99:0,527,7308	0/0:158,0:158:99:0,476,6598	0/0:23,0:23:69.23:0,69,960	0/0:168,0:168:99:0,506,7016
gi|293339394|gb|GU595196.1|	84729	.	A	G	480.60	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.512;DP=2793;Dels=0.00;FS=35.137;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9840;MQ=254.00;MQ0=0;MQRankSum=0.426;QD=36.97;ReadPosRankSum=-2.371;SB=0.18	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:65,0:65:99:0,196,2714	0/0:82,0:82:99:0,247,3424	0/0:81,0:81:99:0,244,3383	0/0:5,0:5:15.05:0,15,209	0/0:156,0:156:99:0,470,6515	0/0:11,0:11:33.11:0,33,459	0/0:155,0:155:99:0,467,6473	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:140,0:140:99:0,421,5846	0/0:178,0:178:99:0,536,7433	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:155,0:155:99:0,467,6473	1/1:0,13:13:39.13:543,39,0	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	84738	.	G	A	151.98	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.287;DP=2823;Dels=0.00;FS=12.010;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9828;MQ=254.00;MQ0=0;MQRankSum=0.264;QD=30.40;ReadPosRankSum=-2.631;SB=0.02	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:58,0:58:99:0,175,2422	0/0:76,0:76:99:0,229,3174	0/0:81,0:81:99:0,244,3383	0/0:9,0:9:27.09:0,27,376	0/0:158,0:158:99:0,476,6598	0/0:15,0:15:45.15:0,45,626	0/0:155,0:155:99:0,467,6473	0/0:173,0:173:99:0,521,7225	0/0:178,0:178:99:0,536,7433	0/0:142,0:142:99:0,427,5930	0/0:192,0:192:99:0,578,8018	0/0:188,0:188:99:0,566,7851	0/0:186,0:186:99:0,560,7767	0/0:177,0:177:99:0,533,7392	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:157,0:157:99:0,473,6556	1/1:0,5:5:15.05:209,15,0	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	84749	.	A	C,T	6890.47	.	AC=2,8;AF=0.048,0.190;AN=42;BaseQRankSum=0.624;DP=2818;Dels=0.00;FS=251.078;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=1.567;QD=41.76;ReadPosRankSum=-0.333;SB=-634.00	GT:AD:DP:GQ:PL	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:161,0,0:161:99:0,485,6723,485,6723,6723	2/2:0,0,50:50:99:2088,2088,2088,151,151,0	2/2:0,0,79:79:99:3299,3299,3299,238,238,0	0/0:78,0,0:78:99:0,235,3257,235,3257,3257	2/2:0,0,9:9:27.09:376,376,376,27,27,0	0/0:158,0,0:158:99:0,476,6598,476,6598,6598	2/2:0,0,20:20:60.20:835,835,835,60,60,0	0/0:148,0,0:148:99:0,445,6181,445,6181,6181	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:180,0,0:180:99:0,542,7517,542,7517,7517	0/0:148,0,0:148:99:0,445,6181,445,6181,6181	0/0:185,0,0:185:99:0,557,7726,557,7726,7726	0/0:184,0,0:184:99:0,554,7684,554,7684,7684	0/0:180,0,0:180:99:0,542,7517,542,7517,7517	0/0:183,0,0:183:99:0,551,7642,551,7642,7642	0/0:179,0,0:179:99:0,539,7475,539,7475,7475	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:162,0,0:162:99:0,488,6765,488,6765,6765	1/1:0,7,0:7:21.07:292,21,0,292,21,292	0/0:205,0,0:205:99:0,617,8561,617,8561,8561
gi|293339394|gb|GU595196.1|	84763	.	T	A	1709.21	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.539;DP=2844;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.052;QD=39.75;ReadPosRankSum=1.051;SB=-835.01	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:156,0:156:99:0,470,6515	0/0:50,0:50:99:0,151,2088	0/0:73,0:73:99:0,220,3049	0/0:85,0:85:99:0,256,3550	1/1:0,15:15:45.15:626,45,0	0/0:152,0:152:99:0,458,6348	1/1:0,28:28:84.28:1169,84,0	0/0:151,0:151:99:0,455,6306	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:197,0:197:99:0,593,8227	0/0:183,0:183:99:0,551,7642	0/0:184,0:184:99:0,554,7684	0/0:177,0:177:99:0,533,7392	0/0:184,0:184:99:0,554,7684	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:13,0:13:39.13:0,39,543	0/0:209,0:209:99:0,629,8728
gi|293339394|gb|GU595196.1|	84806	.	G	T	217.40	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.186;DP=2644;Dels=0.00;FS=18.079;HRun=1;HaplotypeScore=0.4761;InbreedingCoeff=0.9051;MQ=254.00;MQ0=0;MQRankSum=0.080;QD=31.06;ReadPosRankSum=-4.227;SB=0.06	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:167,0:167:99:0,503,6974	1/1:0,4:4:12.04:167,12,0	1/1:0,3:3:9.03:125,9,0	0/0:97,0:97:99:0,292,4051	0/0:3,0:3:9.03:0,9,125	0/0:181,0:181:99:0,545,7559	0/0:8,0:8:24.08:0,24,334	0/0:165,0:165:99:0,497,6890	0/0:147,0:147:99:0,442,6139	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:148,0:148:99:0,445,6181	0/0:146,0:146:99:0,439,6097	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:4,0:4:12.04:0,12,167	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	84807	.	A	C	60.84	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.677;DP=2641;Dels=0.00;FS=6.021;HRun=0;HaplotypeScore=0.2857;InbreedingCoeff=0.7350;MQ=254.00;MQ0=0;MQRankSum=-0.254;QD=20.28;ReadPosRankSum=-2.832;SB=0.23	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:98,0:98:99:0,295,4093	0/0:1,0:1:3.01:0,3,42	0/0:182,0:182:99:0,548,7600	0/0:8,0:8:24.08:0,24,334	0/0:163,0:163:99:0,491,6807	0/0:144,0:144:99:0,433,6013	0/0:174,0:174:99:0,524,7266	0/0:181,0:181:99:0,545,7559	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:149,0:149:99:0,448,6222	0/0:147,0:147:99:0,442,6139	0/0:168,0:168:99:0,506,7016	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:4,0:4:12.04:0,12,167	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	84809	.	C	A	249.18	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.104;DP=2617;Dels=0.00;FS=1.388;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.8929;MQ=254.00;MQ0=0;MQRankSum=-0.015;QD=31.15;ReadPosRankSum=-3.360;SB=-108.97	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	./.	./.	0/0:94,0:94:99:0,283,3925	1/1:0,1:1:3.01:42,3,0	0/0:183,0:183:99:0,551,7642	1/1:0,4:4:12.04:167,12,0	0/0:160,0:160:99:0,482,6682	0/0:147,0:147:99:0,442,6139	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:149,0:149:99:0,448,6222	0/0:152,0:152:99:0,458,6348	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	1/1:0,3:3:9.03:125,9,0	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	84811	.	T	G	169.96	.	AC=6;AF=0.158;AN=38;BaseQRankSum=0.783;DP=2594;Dels=0.00;FS=1.628;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8599;MQ=254.00;MQ0=0;MQRankSum=0.204;QD=28.33;ReadPosRankSum=-3.424;SB=-68.74	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:171,0:171:99:0,515,7141	./.	./.	0/0:93,0:93:99:0,280,3884	1/1:0,1:1:3.01:42,3,0	0/0:183,0:183:99:0,551,7642	1/1:0,2:2:6.02:84,6,0	0/0:165,0:165:99:0,497,6890	0/0:142,0:142:99:0,427,5930	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	0/0:149,0:149:99:0,448,6222	0/0:150,0:150:99:0,452,6264	0/0:177,0:177:99:0,533,7392	0/0:179,0:179:99:0,539,7475	0/0:165,0:165:99:0,497,6890	1/1:0,3:3:9.03:125,9,0	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	84957	.	C	A	179.77	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.290;DP=2615;Dels=0.00;FS=6.609;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9228;MQ=254.00;MQ0=0;MQRankSum=-0.568;QD=29.96;ReadPosRankSum=-3.413;SB=-39.03	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:160,0:160:99:0,482,6682	./.	./.	0/0:89,0:89:99:0,268,3717	1/1:0,2:2:6.02:84,6,0	0/0:167,0:167:99:0,503,6974	1/1:0,4:4:12.04:167,12,0	0/0:158,0:158:99:0,476,6598	0/0:181,0:181:99:0,545,7559	0/0:152,0:152:99:0,458,6348	0/0:161,0:161:99:0,485,6723	0/0:191,0:191:99:0,575,7976	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	0/0:184,0:184:99:0,554,7684	0/0:147,0:147:99:0,442,6139	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	./.	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	84984	.	G	T	11066.51	.	AC=6;AF=0.167;AN=36;BaseQRankSum=1.029;DP=2703;Dels=0.00;FS=3.219;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.190;QD=41.76;ReadPosRankSum=3.286;SB=-5512.28	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	./.	./.	0/0:98,0:98:99:0,295,4093	1/1:0,20:20:60.20:835,60,0	0/0:157,0:157:99:0,473,6556	1/1:0,40:40:99:1670,120,0	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	0/0:157,0:157:99:0,473,6556	0/0:155,0:155:99:0,467,6473	0/0:174,0:174:99:0,524,7266	0/0:189,0:189:99:0,569,7893	0/0:151,0:151:99:0,455,6306	0/0:197,0:197:99:0,593,8227	0/0:143,0:143:99:0,430,5972	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	./.	1/1:0,205:205:99:8561,617,0
gi|293339394|gb|GU595196.1|	85019	.	A	T	878.07	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.188;DP=2643;Dels=0.00;FS=0.776;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9957;MQ=254.00;MQ0=0;MQRankSum=-0.949;QD=38.18;ReadPosRankSum=-4.999;SB=-452.40	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:179,0:179:99:0,539,7475	./.	./.	0/0:88,0:88:99:0,265,3675	1/1:0,6:6:18.06:251,18,0	0/0:159,0:159:99:0,479,6640	1/1:0,17:17:51.17:710,51,0	0/0:172,0:172:99:0,518,7183	0/0:153,0:153:99:0,461,6389	0/0:180,0:180:99:0,542,7517	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	./.	0/0:168,0:168:99:0,506,7016
gi|293339394|gb|GU595196.1|	85075	.	A	G	301.24	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.158;DP=2620;Dels=0.00;FS=14.118;HRun=0;HaplotypeScore=0.9999;InbreedingCoeff=0.9388;MQ=254.00;MQ0=0;MQRankSum=0.223;QD=33.47;ReadPosRankSum=1.776;SB=-39.09	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:151,0:151:99:0,455,6306	./.	./.	0/0:96,0:96:99:0,289,4009	1/1:0,2:2:6.02:84,6,0	0/0:176,0:176:99:0,530,7350	1/1:0,7:7:21.07:292,21,0	0/0:165,0:165:99:0,497,6890	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:150,0:150:99:0,452,6264	0/0:177,0:177:99:0,533,7392	0/0:155,0:155:99:0,467,6473	0/0:155,0:155:99:0,467,6473	0/0:167,0:167:99:0,503,6974	./.	0/0:215,0:215:99:0,647,8978
gi|293339394|gb|GU595196.1|	85076	.	T	A	301.24	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.065;DP=2625;Dels=0.00;FS=16.745;HRun=3;HaplotypeScore=0.9999;InbreedingCoeff=0.9388;MQ=254.00;MQ0=0;MQRankSum=-1.114;QD=33.47;ReadPosRankSum=1.375;SB=-39.09	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:153,0:153:99:0,461,6389	./.	./.	0/0:95,0:95:99:0,286,3967	1/1:0,2:2:6.02:84,6,0	0/0:175,0:175:99:0,527,7308	1/1:0,7:7:21.07:292,21,0	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:165,0:165:99:0,497,6890	0/0:147,0:147:99:0,442,6139	0/0:178,0:178:99:0,536,7433	0/0:154,0:154:99:0,464,6431	0/0:157,0:157:99:0,473,6556	0/0:163,0:163:99:0,491,6807	./.	0/0:214,0:214:99:0,644,8937
gi|293339394|gb|GU595196.1|	85083	.	G	A	8560.89	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-1.515;DP=2657;Dels=0.00;FS=5.103;HRun=1;HaplotypeScore=0.9999;InbreedingCoeff=0.8997;MQ=254.00;MQ0=0;MQRankSum=0.842;QD=41.76;ReadPosRankSum=0.071;SB=-3924.85	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:159,0:159:99:0,479,6640	./.	./.	0/0:100,0:100:99:0,301,4176	0/0:2,0:2:6.02:0,6,84	0/0:170,0:170:99:0,512,7099	0/0:7,0:7:21.07:0,21,292	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:160,0:160:99:0,482,6682	0/0:155,0:155:99:0,467,6473	0/0:177,0:177:99:0,533,7392	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	./.	1/1:0,205:205:99:8561,617,0
gi|293339394|gb|GU595196.1|	85113	.	G	A	61.78	.	AC=4;AF=0.105;AN=38;BaseQRankSum=0.132;DP=2683;Dels=0.00;FS=9.128;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.7466;MQ=254.00;MQ0=0;MQRankSum=-0.091;QD=20.59;ReadPosRankSum=-0.370;SB=0.24	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:179,0:179:99:0,539,7475	./.	./.	0/0:108,0:108:99:0,325,4510	1/1:0,2:2:6.02:84,6,0	0/0:191,0:191:99:0,575,7976	1/1:0,1:1:3.01:42,3,0	0/0:165,0:165:99:0,497,6890	0/0:186,0:186:99:0,560,7767	0/0:175,0:175:99:0,527,7308	0/0:164,0:164:99:0,494,6849	0/0:152,0:152:99:0,458,6348	0/0:160,0:160:99:0,482,6682	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:185,0:185:99:0,557,7726	0/0:160,0:160:99:0,482,6682	0/0:1,0:1:3.01:0,3,42	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	85130	.	A	G	249.18	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-1.518;DP=2693;Dels=0.00;FS=11.549;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8929;MQ=254.00;MQ0=0;MQRankSum=-0.991;QD=31.15;ReadPosRankSum=1.090;SB=-30.18	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	./.	./.	0/0:108,0:108:99:0,325,4510	1/1:0,3:3:9.03:125,9,0	0/0:166,0:166:99:0,500,6932	1/1:0,4:4:12.04:167,12,0	0/0:156,0:156:99:0,470,6515	0/0:180,0:180:99:0,542,7517	0/0:187,0:187:99:0,563,7809	0/0:164,0:164:99:0,494,6849	0/0:149,0:149:99:0,448,6222	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:166,0:166:99:0,500,6932	1/1:0,1:1:3.01:42,3,0	0/0:206,0:206:99:0,620,8603
gi|293339394|gb|GU595196.1|	85207	.	A	G	465.05	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.999;DP=2689;Dels=0.00;FS=41.082;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9677;MQ=254.00;MQ0=0;MQRankSum=0.646;QD=35.77;ReadPosRankSum=-3.607;SB=-0.02	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:169,0:169:99:0,509,7057	./.	./.	0/0:71,0:71:99:0,214,2965	1/1:0,3:3:9.03:125,9,0	0/0:181,0:181:99:0,545,7559	1/1:0,10:10:30.10:418,30,0	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:182,0:182:99:0,548,7600	0/0:153,0:153:99:0,461,6389	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	./.	0/0:190,0:190:99:0,572,7934
gi|293339394|gb|GU595196.1|	85214	.	G	A	74.46	.	AC=2;AF=0.059;AN=34;BaseQRankSum=0.019;DP=2622;Dels=0.00;FS=9.626;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9377;MQ=254.00;MQ0=0;MQRankSum=0.357;QD=24.82;ReadPosRankSum=-2.227;SB=-0.02	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:160,0:160:99:0,482,6682	./.	./.	0/0:68,0:68:99:0,205,2840	./.	0/0:177,0:177:99:0,533,7392	1/1:0,3:3:9.03:125,9,0	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:151,0:151:99:0,455,6306	0/0:172,0:172:99:0,518,7183	0/0:185,0:185:99:0,557,7726	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	./.	0/0:190,0:190:99:0,572,7934
gi|293339394|gb|GU595196.1|	85225	.	C	A	8101.52	.	AC=2;AF=0.063;AN=32;BaseQRankSum=1.051;DP=2569;Dels=0.00;FS=1.844;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.596;QD=41.76;ReadPosRankSum=-0.633;SB=-3716.69	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:163,0:163:99:0,491,6807	./.	./.	0/0:74,0:74:99:0,223,3090	./.	0/0:165,0:165:99:0,497,6890	./.	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:163,0:163:99:0,491,6807	0/0:156,0:156:99:0,470,6515	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:152,0:152:99:0,458,6348	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	0/0:150,0:150:99:0,452,6264	./.	1/1:0,194:194:99:8102,584,0
gi|293339394|gb|GU595196.1|	85321	.	T	C	7600.40	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.989;DP=2641;Dels=0.00;FS=7.160;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.259;QD=41.76;ReadPosRankSum=-0.656;SB=-3382.61	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:176,0:176:99:0,530,7350	./.	./.	0/0:94,0:94:99:0,283,3925	./.	0/0:193,0:193:99:0,581,8060	./.	0/0:179,0:179:99:0,539,7475	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:150,0:150:99:0,452,6264	0/0:155,0:155:99:0,467,6473	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	./.	1/1:0,182:182:99:7600,548,0
gi|293339394|gb|GU595196.1|	85360	.	G	T	6556.39	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.628;DP=2676;Dels=0.00;FS=35.537;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.470;QD=41.76;ReadPosRankSum=-0.931;SB=-2255.08	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	./.	./.	0/0:100,0:100:99:0,301,4176	./.	0/0:202,0:202:99:0,608,8436	./.	0/0:164,0:164:99:0,494,6849	0/0:144,0:144:99:0,433,6013	0/0:190,0:190:99:0,572,7934	0/0:176,0:176:99:0,530,7350	0/0:158,0:158:99:0,476,6598	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	0/0:187,0:187:99:0,563,7809	0/0:169,0:169:99:0,509,7057	./.	1/1:0,157:157:99:6556,473,0
gi|293339394|gb|GU595196.1|	85385	.	A	G	4593.66	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.823;DP=2640;Dels=0.00;FS=16.080;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.328;QD=41.76;ReadPosRankSum=4.700;SB=-1712.19	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:155,0:155:99:0,467,6473	./.	./.	0/0:96,0:96:99:0,289,4009	./.	0/0:197,0:197:99:0,593,8227	./.	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	0/0:185,0:185:99:0,557,7726	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:192,0:192:99:0,578,8018	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:177,0:177:99:0,533,7392	./.	1/1:0,110:110:99:4594,331,0
gi|293339394|gb|GU595196.1|	85394	.	A	G	818.06	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.394;DP=2664;Dels=0.00;FS=70.895;HRun=0;HaplotypeScore=1.0999;InbreedingCoeff=0.8832;MQ=254.00;MQ0=0;MQRankSum=-0.273;QD=37.18;ReadPosRankSum=-4.260;SB=-0.02	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:155,0:155:99:0,467,6473	1/1:0,5:5:15.05:209,15,0	1/1:0,15:15:45.15:626,45,0	0/0:94,0:94:99:0,283,3925	1/1:0,1:1:3.01:42,3,0	0/0:189,0:189:99:0,569,7893	1/1:0,1:1:3.01:42,3,0	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:181,0:181:99:0,545,7559	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:198,0:198:99:0,596,8269	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:187,0:187:99:0,563,7809	0/0:172,0:172:99:0,518,7183	./.	0/0:115,0:115:99:0,346,4802
gi|293339394|gb|GU595196.1|	85412	.	T	A,G	7809.20	.	AC=2,10;AF=0.048,0.238;AN=42;BaseQRankSum=0.315;DP=2647;Dels=0.00;FS=3.514;HaplotypeScore=0.1428;InbreedingCoeff=0.9856;MQ=254.00;MQ0=0;MQRankSum=0.747;QD=41.76;ReadPosRankSum=-1.959;SB=-3716.14	GT:AD:DP:GQ:PL	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	2/2:0,0,17:17:51.17:710,710,710,51,51,0	2/2:0,0,35:35:99:1462,1462,1462,105,105,0	0/0:82,0,0:82:99:0,247,3424,247,3424,3424	2/2:0,0,4:4:12.04:167,167,167,12,12,0	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	2/2:0,0,4:4:12.04:167,167,167,12,12,0	0/0:161,0,0:161:99:0,485,6723,485,6723,6723	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	0/0:164,0,0:164:99:0,494,6849,494,6849,6849	0/0:182,0,0:182:99:0,548,7600,548,7600,7600	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:191,0,0:191:99:0,575,7976,575,7976,7976	0/0:183,0,0:183:99:0,551,7642,551,7642,7642	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:176,0,0:176:99:0,530,7350,530,7350,7350	0/0:153,0,0:153:99:0,461,6389,461,6389,6389	1/1:0,3,0:3:9.03:125,9,0,125,9,125	2/2:0,0,124:124:99:5178,5178,5178,373,373,0
gi|293339394|gb|GU595196.1|	85422	.	A	G	4844.22	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.215;DP=2642;Dels=0.00;FS=82.468;HRun=0;HaplotypeScore=2.9996;InbreedingCoeff=0.9532;MQ=254.00;MQ0=0;MQRankSum=-0.297;QD=41.76;ReadPosRankSum=3.658;SB=-1125.19	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:25,0:25:75.25:0,75,1044	0/0:45,0:45:99:0,135,1879	0/0:79,0:79:99:0,238,3299	0/0:5,0:5:15.05:0,15,209	0/0:144,0:144:99:0,433,6013	0/0:4,0:4:12.04:0,12,167	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	0/0:188,0:188:99:0,566,7851	0/0:188,0:188:99:0,566,7851	0/0:179,0:179:99:0,539,7475	0/0:174,0:174:99:0,524,7266	0/0:141,0:141:99:0,424,5888	0/0:8,0:8:24.08:0,24,334	1/1:0,116:116:99:4844,349,0
gi|293339394|gb|GU595196.1|	85442	.	T	A	3549.65	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.783;DP=2617;Dels=0.00;FS=262.436;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9811;MQ=254.00;MQ0=0;MQRankSum=1.689;QD=41.76;ReadPosRankSum=3.702;SB=-0.02	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:178,0:178:99:0,536,7433	1/1:0,27:27:81.27:1128,81,0	1/1:0,40:40:99:1670,120,0	0/0:81,0:81:99:0,244,3383	1/1:0,5:5:15.05:209,15,0	0/0:136,0:136:99:0,409,5679	1/1:0,3:3:9.03:125,9,0	0/0:174,0:174:99:0,524,7266	0/0:149,0:149:99:0,448,6222	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:176,0:176:99:0,530,7350	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:153,0:153:99:0,461,6389	1/1:0,10:10:30.10:418,30,0	0/0:147,0:147:99:0,442,6139
gi|293339394|gb|GU595196.1|	85477	.	A	C	1318.55	.	AC=6;AF=0.158;AN=38;BaseQRankSum=0.648;DP=2595;Dels=0.00;FS=105.450;HRun=0;HaplotypeScore=0.2631;InbreedingCoeff=0.9968;MQ=254.00;MQ0=0;MQRankSum=-0.062;QD=38.78;ReadPosRankSum=-1.324;SB=-0.02	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:172,0:172:99:0,518,7183	1/1:0,18:18:54.18:752,54,0	1/1:0,10:10:30.10:418,30,0	0/0:98,0:98:99:0,295,4093	./.	0/0:189,0:189:99:0,569,7893	./.	0/0:161,0:161:99:0,485,6723	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:171,0:171:99:0,515,7141	0/0:151,0:151:99:0,455,6306	0/0:140,0:140:99:0,421,5846	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	1/1:0,6:6:18.06:251,18,0	0/0:124,0:124:99:0,373,5178
gi|293339394|gb|GU595196.1|	85484	.	A	G,T	882.81	.	AC=4,2;AF=0.105,0.053;AN=38;BaseQRankSum=0.553;DP=2598;Dels=0.00;FS=61.647;HaplotypeScore=0.0000;InbreedingCoeff=0.9979;MQ=254.00;MQ0=0;MQRankSum=0.139;QD=35.31;ReadPosRankSum=1.672;SB=-0.02	GT:AD:DP:GQ:PL	0/0:153,0,0:153:99:0,461,6389,461,6389,6389	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	1/1:0,13,0:13:39.13:543,39,0,543,39,543	1/1:0,7,0:7:21.07:292,21,0,292,21,292	0/0:94,0,0:94:99:0,283,3925,283,3925,3925	./.	0/0:187,0,0:187:99:0,563,7809,563,7809,7809	./.	0/0:161,0,0:161:99:0,485,6723,485,6723,6723	0/0:186,0,0:186:99:0,560,7767,560,7767,7767	0/0:180,0,0:180:99:0,542,7517,542,7517,7517	0/0:187,0,0:187:99:0,563,7809,563,7809,7809	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	0/0:169,0,0:169:99:0,509,7057,509,7057,7057	0/0:158,0,0:158:99:0,476,6598,476,6598,6598	0/0:144,0,0:144:99:0,433,6013,433,6013,6013	0/0:160,0,0:160:99:0,482,6682,482,6682,6682	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	2/2:0,0,5:5:15.05:209,209,209,15,15,0	0/0:112,0,0:112:99:0,337,4677,337,4677,4677
gi|293339394|gb|GU595196.1|	85532	.	C	A	459.05	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.217;DP=2546;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9222;MQ=254.00;MQ0=0;MQRankSum=0.512;QD=35.31;ReadPosRankSum=-1.059;SB=-241.14	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:173,0:173:99:0,521,7225	0/0:4,0:4:12.04:0,12,167	0/0:6,0:6:18.06:0,18,251	0/0:81,0:81:99:0,244,3383	1/1:0,6:6:18.06:251,18,0	0/0:198,0:198:99:0,596,8269	1/1:0,7:7:21.07:292,21,0	0/0:157,0:157:99:0,473,6556	0/0:146,0:146:99:0,439,6097	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:198,0:198:99:0,596,8269	0/0:190,0:190:99:0,572,7934	0/0:184,0:184:99:0,554,7684	0/0:167,0:167:99:0,503,6974	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	0/0:150,0:150:99:0,452,6264	0/0:2,0:2:6.02:0,6,84	0/0:59,0:59:99:0,178,2464
gi|293339394|gb|GU595196.1|	85544	.	G	A	1441.14	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.935;DP=2465;Dels=0.00;FS=105.538;HRun=1;HaplotypeScore=0.9999;InbreedingCoeff=0.8995;MQ=254.00;MQ0=0;MQRankSum=0.671;QD=40.03;ReadPosRankSum=-2.928;SB=0.02	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:163,0:163:99:0,491,6807	0/0:7,0:7:21.07:0,21,292	0/0:11,0:11:33.11:0,33,459	0/0:70,0:70:99:0,211,2923	0/0:12,0:12:36.12:0,36,501	0/0:191,0:191:99:0,575,7976	0/0:9,0:9:27.09:0,27,376	0/0:146,0:146:99:0,439,6097	0/0:132,0:132:99:0,397,5512	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	0/0:179,0:179:99:0,539,7475	0/0:193,0:193:99:0,581,8060	0/0:186,0:186:99:0,560,7767	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:154,0:154:99:0,464,6431	0/0:2,0:2:6.02:0,6,84	1/1:0,36:36:99:1503,108,0
gi|293339394|gb|GU595196.1|	85546	.	G	A	790.95	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.134;DP=2440;Dels=0.00;FS=0.814;HRun=1;HaplotypeScore=1.8569;InbreedingCoeff=0.9426;MQ=254.00;MQ0=0;MQRankSum=1.061;QD=37.66;ReadPosRankSum=-0.373;SB=-410.67	GT:AD:DP:GQ:PL	0/0:140,0:140:99:0,421,5846	0/0:161,0:161:99:0,485,6723	0/0:6,0:6:18.06:0,18,251	0/0:13,0:13:39.13:0,39,543	0/0:76,0:76:99:0,229,3174	1/1:0,12:12:36.12:501,36,0	0/0:186,0:186:99:0,560,7767	1/1:0,9:9:27.09:376,27,0	0/0:139,0:139:99:0,418,5805	0/0:135,0:135:99:0,406,5638	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	0/0:173,0:173:99:0,521,7225	0/0:187,0:187:99:0,563,7809	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	0/0:167,0:167:99:0,503,6974	0/0:153,0:153:99:0,461,6389	0/0:2,0:2:6.02:0,6,84	0/0:32,0:32:96.32:0,96,1336
gi|293339394|gb|GU595196.1|	85556	.	G	A	1348.67	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.676;DP=2440;Dels=0.00;FS=103.173;HRun=0;HaplotypeScore=0.8570;InbreedingCoeff=0.9628;MQ=254.00;MQ0=0;MQRankSum=0.790;QD=38.53;ReadPosRankSum=-1.821;SB=0.21	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:160,0:160:99:0,482,6682	1/1:0,5:5:15.05:209,15,0	1/1:0,16:16:48.16:668,48,0	0/0:75,0:75:99:0,226,3132	0/0:10,0:10:30.10:0,30,418	0/0:184,0:184:99:0,554,7684	0/0:8,0:8:24.08:0,24,334	0/0:155,0:155:99:0,467,6473	0/0:137,0:137:99:0,412,5721	0/0:162,0:162:99:0,488,6765	0/0:185,0:185:99:0,557,7726	0/0:173,0:173:99:0,521,7225	0/0:181,0:181:99:0,545,7559	0/0:175,0:175:99:0,527,7308	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:157,0:157:99:0,473,6556	0/0:156,0:156:99:0,470,6515	1/1:0,2:2:6.02:84,6,0	1/1:0,12:12:36.12:501,36,0
gi|293339394|gb|GU595196.1|	85567	.	G	A	2359.51	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.959;DP=2493;Dels=0.00;FS=78.018;HRun=1;HaplotypeScore=1.2855;InbreedingCoeff=0.9584;MQ=254.00;MQ0=0;MQRankSum=-1.586;QD=39.99;ReadPosRankSum=-3.517;SB=-333.75	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:163,0:163:99:0,491,6807	1/1:0,8:8:24.08:334,24,0	1/1:0,23:23:69.23:960,69,0	0/0:86,0:86:99:0,259,3591	0/0:10,0:10:30.10:0,30,418	0/0:178,0:178:99:0,536,7433	0/0:6,0:6:18.06:0,18,251	0/0:157,0:157:99:0,473,6556	0/0:140,0:140:99:0,421,5846	0/0:159,0:159:99:0,479,6640	0/0:182,0:182:99:0,548,7600	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:153,0:153:99:0,461,6389	0/0:2,0:2:6.02:0,6,84	1/1:0,28:28:84.28:1169,84,0
gi|293339394|gb|GU595196.1|	85576	.	G	A	1858.72	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.424;DP=2516;Dels=0.00;FS=35.519;HRun=0;HaplotypeScore=1.2855;InbreedingCoeff=0.9165;MQ=254.00;MQ0=0;MQRankSum=1.202;QD=40.41;ReadPosRankSum=-1.648;SB=-417.42	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:170,0:170:99:0,512,7099	0/0:17,0:17:51.17:0,51,710	0/0:26,0:26:78.26:0,78,1086	0/0:89,0:89:99:0,268,3717	0/0:9,0:9:27.09:0,27,376	0/0:184,0:184:99:0,554,7684	0/0:4,0:4:12.04:0,12,167	0/0:154,0:154:99:0,464,6431	0/0:141,0:141:99:0,424,5888	0/0:161,0:161:99:0,485,6723	0/0:194,0:194:99:0,584,8102	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:184,0:184:99:0,554,7684	0/0:159,0:159:99:0,479,6640	0/0:159,0:159:99:0,479,6640	0/0:152,0:152:99:0,458,6348	0/0:3,0:3:9.03:0,9,125	1/1:0,46:46:99:1921,138,0
gi|293339394|gb|GU595196.1|	85599	.	A	G	2922.06	.	AC=4;AF=0.105;AN=38;BaseQRankSum=1.930;DP=2705;Dels=0.00;FS=79.453;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=1.385;QD=40.58;ReadPosRankSum=2.680;SB=-459.38	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	1/1:0,29:29:87.29:1211,87,0	1/1:0,43:43:99:1796,129,0	0/0:102,0:102:99:0,307,4260	./.	0/0:181,0:181:99:0,545,7559	./.	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:177,0:177:99:0,533,7392	0/0:193,0:193:99:0,581,8060	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	0/0:179,0:179:99:0,539,7475	0/0:157,0:157:99:0,473,6556	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	0/0:11,0:11:33.11:0,33,459	0/0:117,0:117:99:0,352,4886
gi|293339394|gb|GU595196.1|	85619	.	A	G	4551.90	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-1.055;DP=2662;Dels=0.00;FS=44.785;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.769;QD=41.76;ReadPosRankSum=4.196;SB=-1294.59	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	0/0:39,0:39:99:0,117,1629	0/0:47,0:47:99:0,141,1963	0/0:94,0:94:99:0,283,3925	./.	0/0:166,0:166:99:0,500,6932	./.	0/0:143,0:143:99:0,430,5972	0/0:177,0:177:99:0,533,7392	0/0:177,0:177:99:0,533,7392	0/0:169,0:169:99:0,509,7057	0/0:188,0:188:99:0,566,7851	0/0:165,0:165:99:0,497,6890	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	0/0:14,0:14:42.14:0,42,585	1/1:0,109:109:99:4552,328,0
gi|293339394|gb|GU595196.1|	85649	.	T	C	2349.87	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-0.536;DP=2503;Dels=0.00;FS=30.644;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9906;MQ=254.00;MQ0=0;MQRankSum=0.981;QD=39.83;ReadPosRankSum=-6.709;SB=-709.90	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:177,0:177:99:0,533,7392	1/1:0,16:16:48.16:668,48,0	1/1:0,15:15:45.15:626,45,0	0/0:71,0:71:99:0,214,2965	./.	0/0:177,0:177:99:0,533,7392	./.	0/0:151,0:151:99:0,455,6306	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:193,0:193:99:0,581,8060	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:187,0:187:99:0,563,7809	1/1:0,4:4:12.04:167,12,0	1/1:0,24:24:72.24:1002,72,0
gi|293339394|gb|GU595196.1|	85658	.	G	C	535.54	.	AC=6;AF=0.167;AN=36;BaseQRankSum=0.216;DP=2413;Dels=0.00;FS=17.403;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9259;MQ=254.00;MQ0=0;MQRankSum=0.911;QD=35.70;ReadPosRankSum=-5.684;SB=-123.75	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:179,0:179:99:0,539,7475	1/1:0,6:6:18.06:251,18,0	1/1:0,8:8:24.08:334,24,0	0/0:70,0:70:99:0,211,2923	./.	0/0:175,0:175:99:0,527,7308	./.	0/0:163,0:163:99:0,491,6807	0/0:154,0:154:99:0,464,6431	0/0:172,0:172:99:0,518,7183	0/0:147,0:147:99:0,442,6139	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	0/0:155,0:155:99:0,467,6473	0/0:157,0:157:99:0,473,6556	0/0:143,0:143:99:0,430,5972	0/0:175,0:175:99:0,527,7308	0/0:190,0:190:99:0,572,7934	1/1:0,1:1:3.01:42,3,0	./.
gi|293339394|gb|GU595196.1|	85814	.	G	A	10231.30	.	AC=10;AF=0.250;AN=40;BaseQRankSum=1.678;DP=2815;Dels=0.00;FS=153.144;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.505;QD=41.76;ReadPosRankSum=5.652;SB=-2338.56	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:158,0:158:99:0,476,6598	1/1:0,17:17:51.17:710,51,0	1/1:0,18:18:54.18:752,54,0	0/0:96,0:96:99:0,289,4009	1/1:0,38:38:99:1587,114,0	0/0:172,0:172:99:0,518,7183	1/1:0,65:65:99:2714,196,0	0/0:185,0:185:99:0,557,7726	0/0:165,0:165:99:0,497,6890	0/0:183,0:183:99:0,551,7642	0/0:184,0:184:99:0,554,7684	0/0:207,0:207:99:0,623,8644	0/0:167,0:167:99:0,503,6974	0/0:180,0:180:99:0,542,7517	0/0:149,0:149:99:0,448,6222	0/0:177,0:177:99:0,533,7392	0/0:195,0:195:99:0,587,8143	0/0:171,0:171:99:0,515,7141	./.	1/1:0,107:107:99:4468,322,0
gi|293339394|gb|GU595196.1|	85823	.	G	A	11400.59	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.611;DP=2854;Dels=0.00;FS=180.831;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.486;QD=41.76;ReadPosRankSum=4.054;SB=-2422.08	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:172,0:172:99:0,518,7183	1/1:0,17:17:51.17:710,51,0	1/1:0,18:18:54.18:752,54,0	0/0:99,0:99:99:0,298,4134	1/1:0,47:47:99:1963,141,0	0/0:170,0:170:99:0,512,7099	1/1:0,77:77:99:3216,232,0	0/0:188,0:188:99:0,566,7851	0/0:175,0:175:99:0,527,7308	0/0:184,0:184:99:0,554,7684	0/0:185,0:185:99:0,557,7726	0/0:200,0:200:99:0,602,8352	0/0:157,0:157:99:0,473,6556	0/0:175,0:175:99:0,527,7308	0/0:150,0:150:99:0,452,6264	0/0:183,0:183:99:0,551,7642	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	./.	1/1:0,114:114:99:4761,343,0
gi|293339394|gb|GU595196.1|	85864	.	C	A	233.23	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.426;DP=2482;Dels=0.00;FS=11.858;HRun=0;HaplotypeScore=0.2222;InbreedingCoeff=0.9947;MQ=254.00;MQ0=0;MQRankSum=0.673;QD=33.32;ReadPosRankSum=-3.465;SB=-40.46	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:179,0:179:99:0,539,7475	./.	./.	0/0:90,0:90:99:0,271,3758	0/0:9,0:9:27.09:0,27,376	0/0:175,0:175:99:0,527,7308	0/0:12,0:12:36.12:0,36,501	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:158,0:158:99:0,476,6598	0/0:153,0:153:99:0,461,6389	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	./.	1/1:0,7:7:21.07:292,21,0
gi|293339394|gb|GU595196.1|	85869	.	T	G	101.81	.	AC=4;AF=0.118;AN=34;BaseQRankSum=0.547;DP=2443;Dels=0.00;FS=12.609;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8604;MQ=254.00;MQ0=0;MQRankSum=-1.106;QD=25.45;ReadPosRankSum=-3.394;SB=-0.02	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:171,0:171:99:0,515,7141	./.	./.	0/0:92,0:92:99:0,277,3842	1/1:0,1:1:3.01:42,3,0	0/0:182,0:182:99:0,548,7600	1/1:0,3:3:9.03:125,9,0	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:157,0:157:99:0,473,6556	0/0:151,0:151:99:0,455,6306	0/0:182,0:182:99:0,548,7600	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:186,0:186:99:0,560,7767	0/0:166,0:166:99:0,500,6932	./.	./.
gi|293339394|gb|GU595196.1|	85882	.	A	C	4176.05	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.068;DP=2616;Dels=0.00;FS=190.815;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=1.145;QD=41.76;ReadPosRankSum=-9.980;SB=-334.10	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:156,0:156:99:0,470,6515	1/1:0,19:19:57.19:793,57,0	1/1:0,28:28:84.28:1169,84,0	0/0:86,0:86:99:0,259,3591	1/1:0,9:9:27.09:376,27,0	0/0:190,0:190:99:0,572,7934	1/1:0,18:18:54.18:752,54,0	0/0:186,0:186:99:0,560,7767	0/0:170,0:170:99:0,512,7099	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:180,0:180:99:0,542,7517	0/0:182,0:182:99:0,548,7600	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	0/0:187,0:187:99:0,563,7809	0/0:161,0:161:99:0,485,6723	./.	1/1:0,26:26:78.26:1086,78,0
gi|293339394|gb|GU595196.1|	85893	.	A	T	8226.80	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.654;DP=2704;Dels=0.00;FS=386.425;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.083;QD=41.76;ReadPosRankSum=-3.313;SB=-501.14	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	1/1:0,36:36:99:1503,108,0	1/1:0,42:42:99:1754,126,0	0/0:80,0:80:99:0,241,3341	1/1:0,22:22:66.22:919,66,0	0/0:183,0:183:99:0,551,7642	1/1:0,43:43:99:1796,129,0	0/0:183,0:183:99:0,551,7642	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:194,0:194:99:0,584,8102	0/0:165,0:165:99:0,497,6890	0/0:184,0:184:99:0,554,7684	0/0:171,0:171:99:0,515,7141	0/0:157,0:157:99:0,473,6556	0/0:180,0:180:99:0,542,7517	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	1/1:0,10:10:30.10:418,30,0	1/1:0,44:44:99:1837,132,0
gi|293339394|gb|GU595196.1|	85910	.	A	G	731.11	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.987;DP=2846;Dels=0.00;FS=47.627;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.524;QD=38.48;ReadPosRankSum=2.285;SB=-0.02	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:60,0:60:99:0,181,2506	0/0:72,0:72:99:0,217,3007	0/0:85,0:85:99:0,256,3550	0/0:36,0:36:99:0,108,1503	0/0:182,0:182:99:0,548,7600	0/0:67,0:67:99:0,202,2798	0/0:190,0:190:99:0,572,7934	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:195,0:195:99:0,587,8143	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:182,0:182:99:0,548,7600	0/0:155,0:155:99:0,467,6473	0/0:178,0:178:99:0,536,7433	0/0:153,0:153:99:0,461,6389	0/0:181,0:181:99:0,545,7559	1/1:0,19:19:57.19:793,57,0	0/0:82,0:82:99:0,247,3424
gi|293339394|gb|GU595196.1|	85965	.	G	A	4677.18	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.734;DP=2925;Dels=0.00;FS=63.073;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.465;QD=41.76;ReadPosRankSum=1.072;SB=-1002.27	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:184,0:184:99:0,554,7684	0/0:57,0:57:99:0,172,2380	0/0:79,0:79:99:0,238,3299	0/0:75,0:75:99:0,226,3132	1/1:0,41:41:99:1712,123,0	0/0:177,0:177:99:0,533,7392	1/1:0,71:71:99:2965,214,0	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:208,0:208:99:0,626,8686	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:176,0:176:99:0,530,7350	0/0:157,0:157:99:0,473,6556	0/0:184,0:184:99:0,554,7684	0/0:43,0:43:99:0,129,1796	0/0:117,0:117:99:0,352,4886
gi|293339394|gb|GU595196.1|	86037	.	G	A	1691.59	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.149;DP=2879;Dels=0.00;FS=87.250;HRun=0;HaplotypeScore=1.9997;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.056;QD=40.28;ReadPosRankSum=0.662;SB=-83.54	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:155,0:155:99:0,467,6473	0/0:70,0:70:99:0,211,2923	0/0:106,0:106:99:0,319,4427	0/0:81,0:81:99:0,244,3383	0/0:44,0:44:99:0,132,1837	0/0:159,0:159:99:0,479,6640	0/0:74,0:74:99:0,223,3090	0/0:163,0:163:99:0,491,6807	0/0:153,0:153:99:0,461,6389	0/0:146,0:146:99:0,439,6097	0/0:156,0:156:99:0,470,6515	0/0:175,0:175:99:0,527,7308	0/0:170,0:170:99:0,512,7099	0/0:182,0:182:99:0,548,7600	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:143,0:143:99:0,430,5972	1/1:0,42:42:99:1754,126,0	0/0:172,0:172:99:0,518,7183
gi|293339394|gb|GU595196.1|	86046	.	A	C	22258.28	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.316;DP=2901;Dels=0.00;FS=171.553;HRun=0;HaplotypeScore=1.7141;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.572;QD=41.76;ReadPosRankSum=0.005;SB=-6681.67	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:156,0:156:99:0,470,6515	1/1:0,75:75:99:3132,226,0	1/1:0,114:114:99:4761,343,0	0/0:82,0:82:99:0,247,3424	1/1:0,52:52:99:2172,157,0	0/0:172,0:172:99:0,518,7183	1/1:0,84:84:99:3508,253,0	0/0:170,0:170:99:0,512,7099	0/0:141,0:141:99:0,424,5888	0/0:157,0:157:99:0,473,6556	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:180,0:180:99:0,542,7517	0/0:154,0:154:99:0,464,6431	0/0:180,0:180:99:0,542,7517	0/0:180,0:180:99:0,542,7517	0/0:139,0:139:99:0,418,5805	1/1:0,45:45:99:1879,135,0	1/1:0,163:163:99:6807,491,0
gi|293339394|gb|GU595196.1|	86082	.	C	G	4176.05	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.420;DP=2976;Dels=0.00;FS=50.554;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.131;QD=41.76;ReadPosRankSum=2.255;SB=-1294.59	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:106,0:106:99:0,319,4427	0/0:125,0:125:99:0,376,5220	0/0:78,0:78:99:0,235,3257	1/1:0,33:33:99:1378,99,0	0/0:213,0:213:99:0,641,8895	1/1:0,67:67:99:2798,202,0	0/0:206,0:206:99:0,620,8603	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:150,0:150:99:0,452,6264	0/0:166,0:166:99:0,500,6932	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:151,0:151:99:0,455,6306	0/0:37,0:37:99:0,111,1545	0/0:156,0:156:99:0,470,6515
gi|293339394|gb|GU595196.1|	86096	.	C	T	3129.05	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.797;DP=3029;Dels=0.00;FS=44.073;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.196;QD=40.64;ReadPosRankSum=-2.221;SB=-918.75	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:171,0:171:99:0,515,7141	0/0:113,0:113:99:0,340,4719	0/0:141,0:141:99:0,424,5888	0/0:73,0:73:99:0,220,3049	1/1:0,26:26:78.26:1086,78,0	0/0:216,0:216:99:0,650,9020	1/1:0,51:51:99:2130,154,0	0/0:199,0:199:99:0,599,8310	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:176,0:176:99:0,530,7350	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	0/0:44,0:44:99:0,132,1837	0/0:166,0:166:99:0,500,6932
gi|293339394|gb|GU595196.1|	86117	.	G	A	2878.49	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.544;DP=3096;Dels=0.00;FS=52.208;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.135;QD=40.54;ReadPosRankSum=1.180;SB=-709.94	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:157,0:157:99:0,473,6556	0/0:101,0:101:99:0,304,4218	0/0:144,0:144:99:0,433,6013	0/0:72,0:72:99:0,217,3007	1/1:0,19:19:57.19:793,57,0	0/0:229,0:229:99:0,689,9563	1/1:0,52:52:99:2172,157,0	0/0:200,0:200:99:0,602,8352	0/0:182,0:182:99:0,548,7600	0/0:174,0:174:99:0,524,7266	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:66,0:66:99:0,199,2756	0/0:179,0:179:99:0,539,7475
gi|293339394|gb|GU595196.1|	86135	.	G	A	9145.53	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.532;DP=3159;Dels=0.00;FS=15.225;HRun=0;HaplotypeScore=11.5223;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.364;QD=41.76;ReadPosRankSum=0.322;SB=-4050.55	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:182,0:182:99:0,548,7600	1/1:0,82:82:99:3424,247,0	1/1:0,137:137:99:5721,412,0	0/0:96,0:96:99:0,289,4009	0/0:36,0:36:99:0,108,1503	0/0:202,0:202:99:0,608,8436	0/0:80,0:80:99:0,241,3341	0/0:185,0:185:99:0,557,7726	0/0:187,0:187:99:0,563,7809	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:200,0:200:99:0,602,8352	0/0:189,0:189:99:0,569,7893	0/0:184,0:184:99:0,554,7684	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:70,0:70:99:0,211,2923	0/0:168,0:168:99:0,506,7016
gi|293339394|gb|GU595196.1|	86140	.	C	G	4760.70	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.001;DP=3168;Dels=0.00;FS=197.702;HRun=0;HaplotypeScore=13.3792;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.882;QD=41.76;ReadPosRankSum=0.958;SB=-417.62	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	0/0:81,0:81:99:0,244,3383	0/0:143,0:143:99:0,430,5972	0/0:91,0:91:99:0,274,3800	1/1:0,33:33:99:1378,99,0	0/0:201,0:201:99:0,605,8394	1/1:0,81:81:99:3383,244,0	0/0:185,0:185:99:0,557,7726	0/0:183,0:183:99:0,551,7642	0/0:169,0:169:99:0,509,7057	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	0/0:197,0:197:99:0,593,8227	0/0:186,0:186:99:0,560,7767	0/0:183,0:183:99:0,551,7642	0/0:164,0:164:99:0,494,6849	0/0:155,0:155:99:0,467,6473	0/0:175,0:175:99:0,527,7308	0/0:73,0:73:99:0,220,3049	0/0:179,0:179:99:0,539,7475
gi|293339394|gb|GU595196.1|	86144	.	G	A	7308.08	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.007;DP=3169;Dels=0.00;FS=5.574;HRun=1;HaplotypeScore=13.7601;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.855;QD=41.76;ReadPosRankSum=-1.096;SB=-3465.91	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:83,0:83:99:0,250,3466	0/0:135,0:135:99:0,406,5638	0/0:90,0:90:99:0,271,3758	0/0:38,0:38:99:0,114,1587	0/0:197,0:197:99:0,593,8227	0/0:90,0:90:99:0,271,3758	0/0:183,0:183:99:0,551,7642	0/0:182,0:182:99:0,548,7600	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:173,0:173:99:0,521,7225	0/0:200,0:200:99:0,602,8352	0/0:184,0:184:99:0,554,7684	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	0/0:176,0:176:99:0,530,7350	0/0:76,0:76:99:0,229,3174	1/1:0,175:175:99:7308,527,0
gi|293339394|gb|GU595196.1|	86208	.	G	A	915.87	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.312;DP=2970;Dels=0.00;FS=67.502;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=1.096;QD=38.16;ReadPosRankSum=-5.098;SB=-0.02	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:181,0:181:99:0,545,7559	0/0:98,0:98:99:0,295,4093	0/0:134,0:134:99:0,403,5596	0/0:92,0:92:99:0,277,3842	1/1:0,10:10:30.10:418,30,0	0/0:178,0:178:99:0,536,7433	1/1:0,14:14:42.14:585,42,0	0/0:170,0:170:99:0,512,7099	0/0:154,0:154:99:0,464,6431	0/0:152,0:152:99:0,458,6348	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:183,0:183:99:0,551,7642	0/0:188,0:188:99:0,566,7851	0/0:186,0:186:99:0,560,7767	0/0:179,0:179:99:0,539,7475	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:58,0:58:99:0,175,2422	0/0:151,0:151:99:0,455,6306
gi|293339394|gb|GU595196.1|	86210	.	T	C	707.28	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.860;DP=2960;Dels=0.00;FS=53.448;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9992;MQ=254.00;MQ0=0;MQRankSum=0.606;QD=37.23;ReadPosRankSum=-5.083;SB=-0.02	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:179,0:179:99:0,539,7475	0/0:94,0:94:99:0,283,3925	0/0:135,0:135:99:0,406,5638	0/0:90,0:90:99:0,271,3758	1/1:0,9:9:27.09:376,27,0	0/0:182,0:182:99:0,548,7600	1/1:0,10:10:30.10:418,30,0	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:152,0:152:99:0,458,6348	0/0:154,0:154:99:0,464,6431	0/0:164,0:164:99:0,494,6849	0/0:179,0:179:99:0,539,7475	0/0:181,0:181:99:0,545,7559	0/0:186,0:186:99:0,560,7767	0/0:182,0:182:99:0,548,7600	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:52,0:52:99:0,157,2172	0/0:154,0:154:99:0,464,6431
gi|293339394|gb|GU595196.1|	86228	.	G	A	1291.61	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.429;DP=2850;Dels=0.00;FS=89.275;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.491;QD=39.14;ReadPosRankSum=-6.109;SB=-0.02	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:75,0:75:99:0,226,3132	0/0:129,0:129:99:0,388,5387	0/0:80,0:80:99:0,241,3341	1/1:0,13:13:39.13:543,39,0	0/0:180,0:180:99:0,542,7517	1/1:0,20:20:60.20:835,60,0	0/0:178,0:178:99:0,536,7433	0/0:148,0:148:99:0,445,6181	0/0:159,0:159:99:0,479,6640	0/0:152,0:152:99:0,458,6348	0/0:162,0:162:99:0,488,6765	0/0:187,0:187:99:0,563,7809	0/0:170,0:170:99:0,512,7099	0/0:180,0:180:99:0,542,7517	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:157,0:157:99:0,473,6556	0/0:52,0:52:99:0,157,2172	0/0:143,0:143:99:0,430,5972
gi|293339394|gb|GU595196.1|	86237	.	G	A	2001.53	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.276;DP=2848;Dels=0.00;FS=137.227;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.366;QD=40.03;ReadPosRankSum=-1.930;SB=-0.02	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:167,0:167:99:0,503,6974	0/0:73,0:73:99:0,220,3049	0/0:122,0:122:99:0,367,5095	0/0:79,0:79:99:0,238,3299	1/1:0,22:22:66.22:919,66,0	0/0:189,0:189:99:0,569,7893	1/1:0,28:28:84.28:1169,84,0	0/0:166,0:166:99:0,500,6932	0/0:156,0:156:99:0,470,6515	0/0:163,0:163:99:0,491,6807	0/0:158,0:158:99:0,476,6598	0/0:159,0:159:99:0,479,6640	0/0:199,0:199:99:0,599,8310	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:148,0:148:99:0,445,6181	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:49,0:49:99:0,147,2046	0/0:132,0:132:99:0,397,5512
gi|293339394|gb|GU595196.1|	86303	.	T	A	340.47	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.295;DP=2643;Dels=0.00;FS=21.698;HRun=0;HaplotypeScore=0.4761;InbreedingCoeff=0.9409;MQ=254.00;MQ0=0;MQRankSum=-0.413;QD=34.05;ReadPosRankSum=-4.332;SB=-0.02	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:156,0:156:99:0,470,6515	0/0:56,0:56:99:0,169,2339	0/0:86,0:86:99:0,259,3591	0/0:56,0:56:99:0,169,2339	1/1:0,2:2:6.02:84,6,0	0/0:192,0:192:99:0,578,8018	1/1:0,8:8:24.08:334,24,0	0/0:180,0:180:99:0,542,7517	0/0:138,0:138:99:0,415,5763	0/0:175,0:175:99:0,527,7308	0/0:150,0:150:99:0,452,6264	0/0:185,0:185:99:0,557,7726	0/0:179,0:179:99:0,539,7475	0/0:130,0:130:99:0,391,5429	0/0:158,0:158:99:0,476,6598	0/0:138,0:138:99:0,415,5763	0/0:158,0:158:99:0,476,6598	0/0:144,0:144:99:0,433,6013	0/0:43,0:43:99:0,129,1796	0/0:129,0:129:99:0,388,5387
gi|293339394|gb|GU595196.1|	86306	.	G	T	13279.80	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-1.856;DP=2648;Dels=0.00;FS=567.999;HRun=0;HaplotypeScore=0.2500;InbreedingCoeff=0.9960;MQ=254.00;MQ0=0;MQRankSum=1.170;QD=41.76;ReadPosRankSum=0.205;SB=-626.42	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	1/1:0,60:60:99:2506,181,0	1/1:0,82:82:99:3424,247,0	0/0:58,0:58:99:0,175,2422	./.	0/0:196,0:196:99:0,590,8185	1/1:0,5:5:15.05:209,15,0	0/0:175,0:175:99:0,527,7308	0/0:137,0:137:99:0,412,5721	0/0:182,0:182:99:0,548,7600	0/0:151,0:151:99:0,455,6306	0/0:193,0:193:99:0,581,8060	0/0:182,0:182:99:0,548,7600	0/0:130,0:130:99:0,391,5429	0/0:151,0:151:99:0,455,6306	0/0:135,0:135:99:0,406,5638	0/0:153,0:153:99:0,461,6389	0/0:146,0:146:99:0,439,6097	1/1:0,44:44:99:1837,132,0	1/1:0,127:127:99:5304,382,0
gi|293339394|gb|GU595196.1|	86362	.	G	T	1567.19	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-1.821;DP=2713;Dels=0.00;FS=93.204;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.776;QD=40.18;ReadPosRankSum=-0.132;SB=-0.02	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:162,0:162:99:0,488,6765	0/0:59,0:59:99:0,178,2464	0/0:94,0:94:99:0,283,3925	0/0:80,0:80:99:0,241,3341	./.	0/0:200,0:200:99:0,602,8352	./.	0/0:179,0:179:99:0,539,7475	0/0:151,0:151:99:0,455,6306	0/0:181,0:181:99:0,545,7559	0/0:161,0:161:99:0,485,6723	0/0:157,0:157:99:0,473,6556	0/0:188,0:188:99:0,566,7851	0/0:165,0:165:99:0,497,6890	0/0:144,0:144:99:0,433,6013	0/0:154,0:154:99:0,464,6431	0/0:158,0:158:99:0,476,6598	0/0:150,0:150:99:0,452,6264	1/1:0,39:39:99:1629,117,0	0/0:108,0:108:99:0,325,4510
gi|293339394|gb|GU595196.1|	86417	.	A	G	2640.31	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-0.037;DP=2489;Dels=0.00;FS=170.788;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9998;MQ=254.00;MQ0=0;MQRankSum=0.004;QD=40.00;ReadPosRankSum=-7.276;SB=-41.78	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:180,0:180:99:0,542,7517	1/1:0,16:16:48.16:668,48,0	1/1:0,20:20:60.20:835,60,0	0/0:89,0:89:99:0,268,3717	./.	0/0:187,0:187:99:0,563,7809	./.	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:181,0:181:99:0,545,7559	0/0:158,0:158:99:0,476,6598	0/0:143,0:143:99:0,430,5972	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:156,0:156:99:0,470,6515	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:154,0:154:99:0,464,6431	1/1:0,10:10:30.10:418,30,0	1/1:0,20:20:60.20:835,60,0
gi|293339394|gb|GU595196.1|	86523	.	C	T	1202.47	.	AC=8;AF=0.267;AN=30;BaseQRankSum=-0.639;DP=1544;Dels=0.00;FS=2.264;HRun=9;HaplotypeScore=7.7323;InbreedingCoeff=-0.3636;MQ=254.00;MQ0=0;MQRankSum=-0.188;QD=3.44;ReadPosRankSum=-11.511;SB=-652.57	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/1:53,9:62:99:189,0,2027	./.	./.	0/1:21,3:24:53.04:53,0,805	./.	0/0:197,0:197:99:0,593,8227	./.	0/0:171,0:171:99:0,515,7141	0/1:26,7:33:99:193,0,986	0/0:201,0:201:99:0,605,8394	0/1:46,7:53:99:133,0,1761	0/0:181,0:181:99:0,545,7559	0/0:207,0:207:99:0,623,8644	0/1:34,14:48:99:440,0,1275	0/1:46,8:54:99:172,0,1758	0/1:27,3:30:34.98:35,0,1037	0/0:52,2:54:79.02:0,79,2088	0/1:41,5:46:70.34:70,0,1574	./.	./.
gi|293339394|gb|GU595196.1|	86524	.	T	C	2649.14	.	AC=9;AF=0.300;AN=30;BaseQRankSum=-2.097;DP=1548;Dels=0.00;FS=1.728;HRun=1;HaplotypeScore=10.1986;InbreedingCoeff=-0.4286;MQ=254.00;MQ0=0;MQRankSum=0.032;QD=6.46;ReadPosRankSum=-14.312;SB=-1326.24	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/1:49,13:62:99:356,0,1860	./.	./.	0/1:20,8:28:99:250,0,751	./.	0/0:195,0:195:99:0,587,8143	./.	0/0:170,0:170:99:0,512,7099	0/1:24,10:34:99:315,0,900	0/0:200,0:200:99:0,602,8352	0/1:40,11:51:99:306,0,1517	0/0:182,0:182:99:0,548,7600	0/0:207,0:207:99:0,623,8644	0/1:32,19:51:99:640,0,1183	0/1:43,10:53:99:258,0,1636	0/1:27,7:34:99:190,0,1025	0/1:45,8:53:99:175,0,1720	0/1:35,9:44:99:243,0,1329	./.	./.
gi|293339394|gb|GU595196.1|	86532	.	T	G	3060.34	.	AC=9;AF=0.300;AN=30;BaseQRankSum=-0.715;DP=1531;Dels=0.00;FS=1.176;HRun=2;HaplotypeScore=10.8652;InbreedingCoeff=-0.4286;MQ=254.00;MQ0=0;MQRankSum=-0.602;QD=7.18;ReadPosRankSum=-13.756;SB=-1494.85	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/1:39,19:58:99:619,0,1454	./.	./.	0/1:23,5:28:99:125,0,876	./.	0/0:199,0:199:99:0,599,8310	./.	0/0:163,0:163:99:0,491,6807	0/1:45,7:52:99:136,0,1723	0/0:188,0:188:99:0,566,7851	0/1:41,15:56:99:458,0,1544	0/0:184,0:184:99:0,554,7684	0/0:197,0:197:99:0,593,8227	0/1:45,15:60:99:446,0,1699	0/1:34,11:45:99:324,0,1284	0/1:38,10:48:99:273,0,1442	0/1:26,15:41:99:503,0,962	0/1:29,9:38:99:261,0,1097	./.	./.
gi|293339394|gb|GU595196.1|	86534	.	G	T	1138.88	.	AC=8;AF=0.267;AN=30;BaseQRankSum=-0.769;DP=1521;Dels=0.00;FS=3.789;HRun=2;HaplotypeScore=7.5990;InbreedingCoeff=-0.3636;MQ=254.00;MQ0=0;MQRankSum=-0.486;QD=2.96;ReadPosRankSum=-11.744;SB=-490.82	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/1:44,8:52:99:178,0,1681	./.	./.	0/1:26,4:30:76.74:77,0,995	./.	0/0:202,0:202:99:0,608,8436	./.	0/0:161,0:161:99:0,485,6723	0/0:51,0:51:99:0,154,2130	0/0:182,0:182:99:0,548,7600	0/1:51,10:61:99:234,0,1946	0/0:179,0:179:99:0,539,7475	0/0:190,0:190:99:0,572,7934	0/1:54,8:62:99:147,0,2068	0/1:44,6:50:99:100,0,1687	0/1:42,5:47:67.33:67,0,1612	0/1:37,10:47:99:276,0,1404	0/1:30,6:36:99:142,0,1144	./.	./.
gi|293339394|gb|GU595196.1|	86569	.	T	C	649.98	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.898;DP=2431;Dels=0.00;FS=47.720;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.483;QD=38.23;ReadPosRankSum=-4.274;SB=-0.02	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	./.	./.	0/0:84,0:84:99:0,253,3508	./.	0/0:171,0:171:99:0,515,7141	./.	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:173,0:173:99:0,521,7225	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:149,0:149:99:0,448,6222	0/0:155,0:155:99:0,467,6473	0/0:148,0:148:99:0,445,6181	./.	1/1:0,17:17:51.17:710,51,0
gi|293339394|gb|GU595196.1|	86588	.	C	T	900.54	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.339;DP=2475;Dels=0.00;FS=64.931;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.187;QD=39.15;ReadPosRankSum=6.369;SB=-0.02	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	./.	./.	0/0:85,0:85:99:0,256,3550	./.	0/0:150,0:150:99:0,452,6264	./.	0/0:164,0:164:99:0,494,6849	0/0:187,0:187:99:0,563,7809	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	0/0:196,0:196:99:0,590,8185	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	./.	1/1:0,23:23:69.23:960,69,0
gi|293339394|gb|GU595196.1|	86619	.	G	T	193.56	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.553;DP=2465;Dels=0.00;FS=15.001;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9917;MQ=254.00;MQ0=0;MQRankSum=0.938;QD=32.26;ReadPosRankSum=-3.920;SB=-0.02	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:158,0:158:99:0,476,6598	./.	./.	0/0:94,0:94:99:0,283,3925	./.	0/0:166,0:166:99:0,500,6932	./.	0/0:157,0:157:99:0,473,6556	0/0:187,0:187:99:0,563,7809	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:184,0:184:99:0,554,7684	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:181,0:181:99:0,545,7559	0/0:157,0:157:99:0,473,6556	./.	1/1:0,6:6:18.06:251,18,0
gi|293339394|gb|GU595196.1|	86696	.	T	C	1223.55	.	AC=8;AF=0.211;AN=38;BaseQRankSum=0.022;DP=2255;Dels=0.00;FS=83.936;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9854;MQ=254.00;MQ0=0;MQRankSum=-0.170;QD=38.24;ReadPosRankSum=-4.798;SB=-0.02	GT:AD:DP:GQ:PL	0/0:144,0:144:99:0,433,6013	0/0:138,0:138:99:0,415,5763	1/1:0,9:9:27.09:376,27,0	1/1:0,14:14:42.14:585,42,0	0/0:77,0:77:99:0,232,3216	./.	0/0:157,0:157:99:0,473,6556	./.	0/0:158,0:158:99:0,476,6598	0/0:145,0:145:99:0,436,6055	0/0:166,0:166:99:0,500,6932	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:147,0:147:99:0,442,6139	0/0:139,0:139:99:0,418,5805	0/0:140,0:140:99:0,421,5846	0/0:139,0:139:99:0,418,5805	1/1:0,4:4:12.04:167,12,0	1/1:0,5:5:15.05:209,15,0
gi|293339394|gb|GU595196.1|	86730	.	G	T	4009.01	.	AC=8;AF=0.211;AN=38;BaseQRankSum=0.192;DP=2317;Dels=0.00;FS=241.580;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.016;QD=41.76;ReadPosRankSum=3.175;SB=-0.02	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:138,0:138:99:0,415,5763	1/1:0,19:19:57.19:793,57,0	1/1:0,36:36:99:1503,108,0	0/0:73,0:73:99:0,220,3049	./.	0/0:177,0:177:99:0,533,7392	./.	0/0:175,0:175:99:0,527,7308	0/0:152,0:152:99:0,458,6348	0/0:180,0:180:99:0,542,7517	0/0:154,0:154:99:0,464,6431	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:146,0:146:99:0,439,6097	0/0:163,0:163:99:0,491,6807	0/0:135,0:135:99:0,406,5638	0/0:116,0:116:99:0,349,4844	0/0:110,0:110:99:0,331,4594	1/1:0,14:14:42.14:585,42,0	1/1:0,27:27:81.27:1128,81,0
gi|293339394|gb|GU595196.1|	86763	.	C	A	3507.89	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-0.890;DP=2384;Dels=0.00;FS=224.271;HRun=5;HaplotypeScore=0.0000;InbreedingCoeff=0.9894;MQ=254.00;MQ0=0;MQRankSum=0.225;QD=41.76;ReadPosRankSum=-2.862;SB=-0.02	GT:AD:DP:GQ:PL	0/0:147,0:147:99:0,442,6139	0/0:152,0:152:99:0,458,6348	1/1:0,4:4:12.04:167,12,0	1/1:0,12:12:36.12:501,36,0	0/0:77,0:77:99:0,232,3216	./.	0/0:178,0:178:99:0,536,7433	./.	0/0:180,0:180:99:0,542,7517	0/0:156,0:156:99:0,470,6515	0/0:157,0:157:99:0,473,6556	0/0:150,0:150:99:0,452,6264	0/0:180,0:180:99:0,542,7517	0/0:182,0:182:99:0,548,7600	0/0:153,0:153:99:0,461,6389	0/0:164,0:164:99:0,494,6849	0/0:153,0:153:99:0,461,6389	0/0:146,0:146:99:0,439,6097	0/0:125,0:125:99:0,376,5220	1/1:0,7:7:21.07:292,21,0	1/1:0,61:61:99:2547,184,0
gi|293339394|gb|GU595196.1|	86782	.	A	C	5804.71	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-0.879;DP=2477;Dels=0.00;FS=385.301;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.682;QD=41.76;ReadPosRankSum=-0.099;SB=-0.02	GT:AD:DP:GQ:PL	0/0:147,0:147:99:0,442,6139	0/0:151,0:151:99:0,455,6306	1/1:0,14:14:42.14:585,42,0	1/1:0,43:43:99:1796,129,0	0/0:92,0:92:99:0,277,3842	./.	0/0:170,0:170:99:0,512,7099	./.	0/0:189,0:189:99:0,569,7893	0/0:155,0:155:99:0,467,6473	0/0:155,0:155:99:0,467,6473	0/0:149,0:149:99:0,448,6222	0/0:179,0:179:99:0,539,7475	0/0:190,0:190:99:0,572,7934	0/0:154,0:154:99:0,464,6431	0/0:156,0:156:99:0,470,6515	0/0:152,0:152:99:0,458,6348	0/0:157,0:157:99:0,473,6556	0/0:142,0:142:99:0,427,5930	1/1:0,17:17:51.17:710,51,0	1/1:0,65:65:99:2714,196,0
gi|293339394|gb|GU595196.1|	86821	.	C	T	1625.68	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.858;DP=2660;Dels=0.00;FS=100.001;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.539;QD=39.65;ReadPosRankSum=-1.799;SB=-0.02	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:152,0:152:99:0,458,6348	0/0:58,0:58:99:0,175,2422	0/0:89,0:89:99:0,268,3717	0/0:92,0:92:99:0,277,3842	1/1:0,17:17:51.17:710,51,0	0/0:154,0:154:99:0,464,6431	1/1:0,24:24:72.24:1002,72,0	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:146,0:146:99:0,439,6097	0/0:169,0:169:99:0,509,7057	0/0:179,0:179:99:0,539,7475	0/0:165,0:165:99:0,497,6890	0/0:157,0:157:99:0,473,6556	0/0:180,0:180:99:0,542,7517	0/0:161,0:161:99:0,485,6723	0/0:156,0:156:99:0,470,6515	0/0:159,0:159:99:0,479,6640	0/0:39,0:39:99:0,117,1629	0/0:62,0:62:99:0,187,2589
gi|293339394|gb|GU595196.1|	86824	.	C	A	1918	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.576;DP=2668;Dels=0.00;FS=115.565;HRun=0;HaplotypeScore=4.2375;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.346;QD=39.96;ReadPosRankSum=-0.658;SB=-0.02	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:154,0:154:99:0,464,6431	0/0:58,0:58:99:0,175,2422	0/0:95,0:95:99:0,286,3967	0/0:92,0:92:99:0,277,3842	1/1:0,22:22:66.22:919,66,0	0/0:156,0:156:99:0,470,6515	1/1:0,26:26:78.26:1086,78,0	0/0:172,0:172:99:0,518,7183	0/0:172,0:172:99:0,518,7183	0/0:142,0:142:99:0,427,5930	0/0:172,0:172:99:0,518,7183	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	0/0:149,0:149:99:0,448,6222	0/0:177,0:177:99:0,533,7392	0/0:169,0:169:99:0,509,7057	0/0:149,0:149:99:0,448,6222	0/0:161,0:161:99:0,485,6723	0/0:39,0:39:99:0,117,1629	0/0:65,0:65:99:0,196,2714
gi|293339394|gb|GU595196.1|	86832	.	T	C	10231.30	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.910;DP=2681;Dels=0.00;FS=431.512;HRun=0;HaplotypeScore=2.2854;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.377;QD=41.76;ReadPosRankSum=3.867;SB=-501.14	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:147,0:147:99:0,442,6139	1/1:0,59:59:99:2464,178,0	1/1:0,85:85:99:3550,256,0	0/0:88,0:88:99:0,265,3675	0/0:24,0:24:72.24:0,72,1002	0/0:146,0:146:99:0,439,6097	0/0:36,0:36:99:0,108,1503	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:150,0:150:99:0,452,6264	0/0:178,0:178:99:0,536,7433	0/0:155,0:155:99:0,467,6473	0/0:161,0:161:99:0,485,6723	0/0:157,0:157:99:0,473,6556	0/0:185,0:185:99:0,557,7726	0/0:175,0:175:99:0,527,7308	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	1/1:0,41:41:99:1712,123,0	1/1:0,60:60:99:2506,181,0
gi|293339394|gb|GU595196.1|	86847	.	C	A	7558.64	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.787;DP=2663;Dels=0.00;FS=295.950;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.477;QD=41.76;ReadPosRankSum=3.212;SB=-501.14	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:142,0:142:99:0,427,5930	1/1:0,40:40:99:1670,120,0	1/1:0,68:68:99:2840,205,0	0/0:86,0:86:99:0,259,3591	0/0:24,0:24:72.24:0,72,1002	0/0:162,0:162:99:0,488,6765	0/0:36,0:36:99:0,108,1503	0/0:166,0:166:99:0,500,6932	0/0:194,0:194:99:0,584,8102	0/0:148,0:148:99:0,445,6181	0/0:176,0:176:99:0,530,7350	0/0:157,0:157:99:0,473,6556	0/0:179,0:179:99:0,539,7475	0/0:164,0:164:99:0,494,6849	0/0:187,0:187:99:0,563,7809	0/0:176,0:176:99:0,530,7350	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	1/1:0,33:33:99:1378,99,0	1/1:0,40:40:99:1670,120,0
gi|293339394|gb|GU595196.1|	86877	.	C	A	220.44	.	AC=4;AF=0.118;AN=34;BaseQRankSum=0.216;DP=2397;Dels=0.00;FS=21.792;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9313;MQ=254.00;MQ0=0;MQRankSum=-0.281;QD=31.49;ReadPosRankSum=-3.782;SB=-0.02	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:143,0:143:99:0,430,5972	./.	./.	0/0:87,0:87:99:0,262,3633	1/1:0,2:2:6.02:84,6,0	0/0:159,0:159:99:0,479,6640	1/1:0,5:5:15.05:209,15,0	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	0/0:157,0:157:99:0,473,6556	0/0:158,0:158:99:0,476,6598	0/0:157,0:157:99:0,473,6556	./.	./.
gi|293339394|gb|GU595196.1|	86917	.	G	C	3466.13	.	AC=6;AF=0.167;AN=36;BaseQRankSum=-1.036;DP=2536;Dels=0.00;FS=23.054;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.042;QD=41.76;ReadPosRankSum=-6.765;SB=-1127.52	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:173,0:173:99:0,521,7225	1/1:0,32:32:96.32:1336,96,0	1/1:0,34:34:99:1420,102,0	0/0:90,0:90:99:0,271,3758	./.	0/0:191,0:191:99:0,575,7976	./.	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:181,0:181:99:0,545,7559	0/0:179,0:179:99:0,539,7475	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:142,0:142:99:0,427,5930	1/1:0,17:17:51.17:710,51,0	./.
gi|293339394|gb|GU595196.1|	86926	.	C	T	5762.94	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-1.483;DP=2592;Dels=0.00;FS=36.752;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9952;MQ=254.00;MQ0=0;MQRankSum=-0.568;QD=41.76;ReadPosRankSum=-1.427;SB=-1831.19	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	1/1:0,41:41:99:1712,123,0	1/1:0,59:59:99:2464,178,0	0/0:88,0:88:99:0,265,3675	./.	0/0:201,0:201:99:0,605,8394	./.	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:148,0:148:99:0,445,6181	0/0:160,0:160:99:0,482,6682	0/0:168,0:168:99:0,506,7016	0/0:198,0:198:99:0,596,8269	0/0:178,0:178:99:0,536,7433	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:151,0:151:99:0,455,6306	0/0:143,0:143:99:0,430,5972	1/1:0,33:33:99:1378,99,0	1/1:0,5:5:15.05:209,15,0
gi|293339394|gb|GU595196.1|	86949	.	C	T	1525.43	.	AC=2;AF=0.053;AN=38;BaseQRankSum=0.213;DP=2734;Dels=0.00;FS=2.046;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.820;QD=40.14;ReadPosRankSum=3.720;SB=-751.70	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:184,0:184:99:0,554,7684	0/0:83,0:83:99:0,250,3466	0/0:125,0:125:99:0,376,5220	0/0:76,0:76:99:0,229,3174	./.	0/0:183,0:183:99:0,551,7642	./.	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:143,0:143:99:0,430,5972	0/0:169,0:169:99:0,509,7057	0/0:155,0:155:99:0,467,6473	0/0:204,0:204:99:0,614,8519	0/0:158,0:158:99:0,476,6598	0/0:191,0:191:99:0,575,7976	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	0/0:142,0:142:99:0,427,5930	0/0:60,0:60:99:0,181,2506	1/1:0,38:38:99:1587,114,0
gi|293339394|gb|GU595196.1|	86968	.	C	T	16161.27	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-0.687;DP=2805;Dels=0.00;FS=78.277;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.146;QD=41.76;ReadPosRankSum=-0.807;SB=-5721.18	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:180,0:180:99:0,542,7517	1/1:0,82:82:99:3424,247,0	1/1:0,130:130:99:5429,391,0	0/0:85,0:85:99:0,256,3550	./.	0/0:180,0:180:99:0,542,7517	./.	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:150,0:150:99:0,452,6264	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:197,0:197:99:0,593,8227	0/0:152,0:152:99:0,458,6348	0/0:182,0:182:99:0,548,7600	0/0:164,0:164:99:0,494,6849	0/0:155,0:155:99:0,467,6473	0/0:157,0:157:99:0,473,6556	1/1:0,75:75:99:3132,226,0	1/1:0,100:100:99:4176,301,0
gi|293339394|gb|GU595196.1|	86976	.	A	C	73.68	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.051;DP=2815;Dels=0.00;FS=6.017;HRun=0;HaplotypeScore=0.1500;InbreedingCoeff=0.9382;MQ=254.00;MQ0=0;MQRankSum=1.102;QD=24.56;ReadPosRankSum=-2.862;SB=-0.02	GT:AD:DP:GQ:PL	0/0:144,0:144:99:0,433,6013	0/0:194,0:194:99:0,584,8102	0/0:94,0:94:99:0,283,3925	0/0:130,0:130:99:0,391,5429	0/0:84,0:84:99:0,253,3508	./.	0/0:167,0:167:99:0,503,6974	1/1:0,3:3:9.03:125,9,0	0/0:171,0:171:99:0,515,7141	0/0:156,0:156:99:0,470,6515	0/0:157,0:157:99:0,473,6556	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:173,0:173:99:0,521,7225	0/0:153,0:153:99:0,461,6389	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:146,0:146:99:0,439,6097	0/0:157,0:157:99:0,473,6556	0/0:70,0:70:99:0,211,2923	0/0:131,0:131:99:0,394,5471
gi|293339394|gb|GU595196.1|	86988	.	C	T	5637.66	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.279;DP=2809;Dels=0.00;FS=9.499;HRun=6;HaplotypeScore=0.0000;InbreedingCoeff=0.9994;MQ=254.00;MQ0=0;MQRankSum=-1.325;QD=41.76;ReadPosRankSum=3.681;SB=-2505.48	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:191,0:191:99:0,575,7976	0/0:87,0:87:99:0,262,3633	0/0:127,0:127:99:0,382,5304	0/0:91,0:91:99:0,274,3800	0/0:10,0:10:30.10:0,30,418	0/0:170,0:170:99:0,512,7099	0/0:13,0:13:39.13:0,39,543	0/0:153,0:153:99:0,461,6389	0/0:155,0:155:99:0,467,6473	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:177,0:177:99:0,533,7392	0/0:155,0:155:99:0,467,6473	0/0:174,0:174:99:0,524,7266	0/0:157,0:157:99:0,473,6556	0/0:150,0:150:99:0,452,6264	0/0:154,0:154:99:0,464,6431	0/0:68,0:68:99:0,205,2840	1/1:0,135:135:99:5638,406,0
gi|293339394|gb|GU595196.1|	87007	.	G	A	2210.33	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.481;DP=2946;Dels=0.00;FS=7.606;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.359;QD=40.19;ReadPosRankSum=2.076;SB=-876.98	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:95,0:95:99:0,286,3967	0/0:137,0:137:99:0,412,5721	0/0:95,0:95:99:0,286,3967	1/1:0,25:25:75.25:1044,75,0	0/0:167,0:167:99:0,503,6974	1/1:0,30:30:90.30:1253,90,0	0/0:144,0:144:99:0,433,6013	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:183,0:183:99:0,551,7642	0/0:176,0:176:99:0,530,7350	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:155,0:155:99:0,467,6473	0/0:144,0:144:99:0,433,6013	0/0:68,0:68:99:0,205,2840	0/0:179,0:179:99:0,539,7475
gi|293339394|gb|GU595196.1|	87065	.	T	G	2526.80	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.655;DP=2906;Dels=0.00;FS=11.393;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.392;QD=40.75;ReadPosRankSum=-1.887;SB=-918.75	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:156,0:156:99:0,470,6515	0/0:86,0:86:99:0,259,3591	0/0:135,0:135:99:0,406,5638	0/0:93,0:93:99:0,280,3884	0/0:28,0:28:84.28:0,84,1169	0/0:162,0:162:99:0,488,6765	0/0:44,0:44:99:0,132,1837	0/0:184,0:184:99:0,554,7684	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:211,0:211:99:0,635,8811	0/0:163,0:163:99:0,491,6807	0/0:159,0:159:99:0,479,6640	0/0:177,0:177:99:0,533,7392	0/0:164,0:164:99:0,494,6849	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:70,0:70:99:0,211,2923	1/1:0,62:62:99:2589,187,0
gi|293339394|gb|GU595196.1|	87066	.	A	T	2526.80	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.670;DP=2898;Dels=0.00;FS=11.409;HRun=4;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.511;QD=40.75;ReadPosRankSum=-2.902;SB=-918.75	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:155,0:155:99:0,467,6473	0/0:86,0:86:99:0,259,3591	0/0:132,0:132:99:0,397,5512	0/0:95,0:95:99:0,286,3967	0/0:28,0:28:84.28:0,84,1169	0/0:166,0:166:99:0,500,6932	0/0:42,0:42:99:0,126,1754	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:207,0:207:99:0,623,8644	0/0:162,0:162:99:0,488,6765	0/0:158,0:158:99:0,476,6598	0/0:179,0:179:99:0,539,7475	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	0/0:74,0:74:99:0,223,3090	1/1:0,62:62:99:2589,187,0
gi|293339394|gb|GU595196.1|	87091	.	T	C	12528.12	.	AC=8;AF=0.190;AN=42;BaseQRankSum=1.144;DP=2756;Dels=0.00;FS=90.362;HRun=0;HaplotypeScore=0.5714;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.514;QD=41.76;ReadPosRankSum=-0.543;SB=-3716.64	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	1/1:0,83:83:99:3466,250,0	1/1:0,138:138:99:5763,415,0	0/0:95,0:95:99:0,286,3967	0/0:15,0:15:45.15:0,45,626	0/0:156,0:156:99:0,470,6515	0/0:23,0:23:69.23:0,69,960	0/0:150,0:150:99:0,452,6264	0/0:187,0:187:99:0,563,7809	0/0:150,0:150:99:0,452,6264	0/0:155,0:155:99:0,467,6473	0/0:180,0:180:99:0,542,7517	0/0:166,0:166:99:0,500,6932	0/0:147,0:147:99:0,442,6139	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:177,0:177:99:0,533,7392	0/0:181,0:181:99:0,545,7559	1/1:0,67:67:99:2798,202,0	1/1:0,12:12:36.12:501,36,0
gi|293339394|gb|GU595196.1|	87097	.	C	A	1148.71	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.052;DP=2739;Dels=0.00;FS=35.508;HRun=2;HaplotypeScore=3.0948;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-1.196;QD=39.61;ReadPosRankSum=-5.542;SB=-167.05	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:88,0:88:99:0,265,3675	0/0:142,0:142:99:0,427,5930	0/0:91,0:91:99:0,274,3800	0/0:13,0:13:39.13:0,39,543	0/0:161,0:161:99:0,485,6723	0/0:14,0:14:42.14:0,42,585	0/0:149,0:149:99:0,448,6222	0/0:181,0:181:99:0,545,7559	0/0:148,0:148:99:0,445,6181	0/0:151,0:151:99:0,455,6306	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:140,0:140:99:0,421,5846	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:166,0:166:99:0,500,6932	0/0:70,0:70:99:0,211,2923	1/1:0,29:29:87.29:1211,87,0
gi|293339394|gb|GU595196.1|	87104	.	A	C	749.16	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.310;DP=2784;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=1.7141;InbreedingCoeff=0.9989;MQ=254.00;MQ0=0;MQRankSum=0.403;QD=37.46;ReadPosRankSum=-3.634;SB=-371.08	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:88,0:88:99:0,265,3675	0/0:146,0:146:99:0,439,6097	0/0:90,0:90:99:0,271,3758	1/1:0,8:8:24.08:334,24,0	0/0:174,0:174:99:0,524,7266	1/1:0,12:12:36.12:501,36,0	0/0:156,0:156:99:0,470,6515	0/0:177,0:177:99:0,533,7392	0/0:145,0:145:99:0,436,6055	0/0:145,0:145:99:0,436,6055	0/0:179,0:179:99:0,539,7475	0/0:163,0:163:99:0,491,6807	0/0:151,0:151:99:0,455,6306	0/0:181,0:181:99:0,545,7559	0/0:160,0:160:99:0,482,6682	0/0:185,0:185:99:0,557,7726	0/0:172,0:172:99:0,518,7183	0/0:72,0:72:99:0,217,3007	0/0:44,0:44:99:0,132,1837
gi|293339394|gb|GU595196.1|	87106	.	G	A	707.28	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.096;DP=2797;Dels=0.00;FS=3.056;HRun=0;HaplotypeScore=1.6664;InbreedingCoeff=0.9992;MQ=254.00;MQ0=0;MQRankSum=0.734;QD=37.23;ReadPosRankSum=-4.299;SB=-289.51	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:85,0:85:99:0,256,3550	0/0:150,0:150:99:0,452,6264	0/0:88,0:88:99:0,265,3675	1/1:0,10:10:30.10:418,30,0	0/0:169,0:169:99:0,509,7057	1/1:0,9:9:27.09:376,27,0	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	0/0:144,0:144:99:0,433,6013	0/0:149,0:149:99:0,448,6222	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:148,0:148:99:0,445,6181	0/0:182,0:182:99:0,548,7600	0/0:163,0:163:99:0,491,6807	0/0:182,0:182:99:0,548,7600	0/0:179,0:179:99:0,539,7475	0/0:72,0:72:99:0,217,3007	0/0:54,0:54:99:0,163,2255
gi|293339394|gb|GU595196.1|	87118	.	T	G	1041.09	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.405;DP=2862;Dels=0.00;FS=17.394;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.604;QD=38.56;ReadPosRankSum=-4.415;SB=-250.39	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:102,0:102:99:0,307,4260	0/0:143,0:143:99:0,430,5972	0/0:91,0:91:99:0,274,3800	1/1:0,11:11:33.11:459,33,0	0/0:166,0:166:99:0,500,6932	1/1:0,16:16:48.16:668,48,0	0/0:160,0:160:99:0,482,6682	0/0:176,0:176:99:0,530,7350	0/0:151,0:151:99:0,455,6306	0/0:155,0:155:99:0,467,6473	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:156,0:156:99:0,470,6515	0/0:186,0:186:99:0,560,7767	0/0:153,0:153:99:0,461,6389	0/0:184,0:184:99:0,554,7684	0/0:175,0:175:99:0,527,7308	0/0:68,0:68:99:0,205,2840	0/0:89,0:89:99:0,268,3717
gi|293339394|gb|GU595196.1|	87144	.	C	T	13154.52	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.542;DP=3079;Dels=0.00;FS=13.111;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.487;QD=41.76;ReadPosRankSum=-1.189;SB=-5345.34	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	1/1:0,103:103:99:4301,310,0	1/1:0,145:145:99:6055,436,0	0/0:91,0:91:99:0,274,3800	0/0:47,0:47:99:0,141,1963	0/0:200,0:200:99:0,602,8352	0/0:61,0:61:99:0,184,2547	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:184,0:184:99:0,554,7684	0/0:172,0:172:99:0,518,7183	0/0:199,0:199:99:0,599,8310	0/0:164,0:164:99:0,494,6849	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	1/1:0,67:67:99:2798,202,0	0/0:136,0:136:99:0,409,5679
gi|293339394|gb|GU595196.1|	87165	.	T	C	3925.49	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.082;DP=3098;Dels=0.00;FS=94.232;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.933;QD=41.76;ReadPosRankSum=3.130;SB=-668.18	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:182,0:182:99:0,548,7600	0/0:108,0:108:99:0,325,4510	0/0:156,0:156:99:0,470,6515	0/0:96,0:96:99:0,289,4009	1/1:0,38:38:99:1587,114,0	0/0:214,0:214:99:0,644,8937	1/1:0,56:56:99:2339,169,0	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:197,0:197:99:0,593,8227	0/0:160,0:160:99:0,482,6682	0/0:198,0:198:99:0,596,8269	0/0:163,0:163:99:0,491,6807	0/0:146,0:146:99:0,439,6097	0/0:158,0:158:99:0,476,6598	0/0:81,0:81:99:0,244,3383	0/0:128,0:128:99:0,385,5345
gi|293339394|gb|GU595196.1|	87171	.	A	T	3129.05	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.043;DP=3087;Dels=0.00;FS=86.949;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.691;QD=40.64;ReadPosRankSum=0.586;SB=-501.14	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:186,0:186:99:0,560,7767	0/0:103,0:103:99:0,310,4301	0/0:167,0:167:99:0,503,6974	0/0:96,0:96:99:0,289,4009	1/1:0,33:33:99:1378,99,0	0/0:211,0:211:99:0,635,8811	1/1:0,44:44:99:1837,132,0	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:198,0:198:99:0,596,8269	0/0:161,0:161:99:0,485,6723	0/0:195,0:195:99:0,587,8143	0/0:166,0:166:99:0,500,6932	0/0:149,0:149:99:0,448,6222	0/0:153,0:153:99:0,461,6389	0/0:81,0:81:99:0,244,3383	0/0:133,0:133:99:0,400,5554
gi|293339394|gb|GU595196.1|	87195	.	A	T	24930.94	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-1.851;DP=3064;Dels=0.00;FS=13.955;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.083;QD=41.76;ReadPosRankSum=0.672;SB=-11442.35	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	1/1:0,121:121:99:5053,364,0	1/1:0,171:171:99:7141,515,0	0/0:96,0:96:99:0,289,4009	1/1:0,32:32:96.32:1336,96,0	0/0:184,0:184:99:0,554,7684	1/1:0,48:48:99:2004,144,0	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:183,0:183:99:0,551,7642	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:139,0:139:99:0,418,5805	0/0:178,0:178:99:0,536,7433	0/0:148,0:148:99:0,445,6181	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	1/1:0,82:82:99:3424,247,0	1/1:0,143:143:99:5972,430,0
gi|293339394|gb|GU595196.1|	87207	.	A	C	5387.10	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.289;DP=3088;Dels=0.00;FS=71.754;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.296;QD=41.76;ReadPosRankSum=2.946;SB=-1419.87	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:119,0:119:99:0,358,4969	0/0:180,0:180:99:0,542,7517	0/0:86,0:86:99:0,259,3591	1/1:0,58:58:99:2422,175,0	0/0:163,0:163:99:0,491,6807	1/1:0,71:71:99:2965,214,0	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:174,0:174:99:0,524,7266	0/0:145,0:145:99:0,436,6055	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:71,0:71:99:0,214,2965	0/0:142,0:142:99:0,427,5930
gi|293339394|gb|GU595196.1|	87243	.	A	G	3883.73	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.046;DP=3108;Dels=0.00;FS=34.980;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.304;QD=41.76;ReadPosRankSum=1.377;SB=-1169.31	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	0/0:129,0:129:99:0,388,5387	0/0:168,0:168:99:0,506,7016	0/0:88,0:88:99:0,265,3675	1/1:0,45:45:99:1879,135,0	0/0:167,0:167:99:0,503,6974	1/1:0,48:48:99:2004,144,0	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:182,0:182:99:0,548,7600	0/0:155,0:155:99:0,467,6473	0/0:187,0:187:99:0,563,7809	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	0/0:157,0:157:99:0,473,6556	0/0:166,0:166:99:0,500,6932	0/0:90,0:90:99:0,271,3758	0/0:157,0:157:99:0,473,6556
gi|293339394|gb|GU595196.1|	87256	.	C	T	1750.96	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.731;DP=3082;Dels=0.00;FS=10.118;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.550;QD=39.79;ReadPosRankSum=-4.641;SB=-668.13	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:134,0:134:99:0,403,5596	0/0:178,0:178:99:0,536,7433	0/0:98,0:98:99:0,295,4093	1/1:0,19:19:57.19:793,57,0	0/0:181,0:181:99:0,545,7559	1/1:0,25:25:75.25:1044,75,0	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	0/0:179,0:179:99:0,539,7475	0/0:145,0:145:99:0,436,6055	0/0:177,0:177:99:0,533,7392	0/0:157,0:157:99:0,473,6556	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:184,0:184:99:0,554,7684	0/0:92,0:92:99:0,277,3842	0/0:159,0:159:99:0,479,6640
gi|293339394|gb|GU595196.1|	87270	.	C	T	13071	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.518;DP=2953;Dels=0.00;FS=5.908;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.045;QD=41.76;ReadPosRankSum=5.119;SB=-6222.31	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:150,0:150:99:0,452,6264	1/1:0,108:108:99:4510,325,0	1/1:0,138:138:99:5763,415,0	0/0:95,0:95:99:0,286,3967	./.	0/0:180,0:180:99:0,542,7517	./.	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:150,0:150:99:0,452,6264	0/0:175,0:175:99:0,527,7308	0/0:191,0:191:99:0,575,7976	0/0:158,0:158:99:0,476,6598	0/0:187,0:187:99:0,563,7809	0/0:172,0:172:99:0,518,7183	0/0:159,0:159:99:0,479,6640	0/0:156,0:156:99:0,470,6515	0/0:190,0:190:99:0,572,7934	1/1:0,67:67:99:2798,202,0	0/0:166,0:166:99:0,500,6932
gi|293339394|gb|GU595196.1|	87306	.	G	A	13112.76	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.378;DP=3004;Dels=0.00;FS=1.698;HRun=0;HaplotypeScore=1.2379;InbreedingCoeff=0.9992;MQ=254.00;MQ0=0;MQRankSum=-1.082;QD=41.76;ReadPosRankSum=3.991;SB=-6347.41	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:147,0:147:99:0,442,6139	1/1:0,97:97:99:4051,292,0	1/1:0,142:142:99:5930,427,0	0/0:93,0:93:99:0,280,3884	0/0:8,0:8:24.08:0,24,334	0/0:185,0:185:99:0,557,7726	0/0:18,0:18:54.18:0,54,752	0/0:177,0:177:99:0,533,7392	0/0:198,0:198:99:0,596,8269	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	0/0:179,0:179:99:0,539,7475	0/0:193,0:193:99:0,581,8060	0/0:166,0:166:99:0,500,6932	0/0:182,0:182:99:0,548,7600	0/0:155,0:155:99:0,467,6473	0/0:163,0:163:99:0,491,6807	0/0:159,0:159:99:0,479,6640	1/1:0,75:75:99:3132,226,0	0/0:167,0:167:99:0,503,6974
gi|293339394|gb|GU595196.1|	87308	.	A	T	13906.21	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.735;DP=3005;Dels=0.00;FS=0.206;HRun=0;HaplotypeScore=1.2379;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-0.319;QD=41.76;ReadPosRankSum=5.408;SB=-6845.75	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:152,0:152:99:0,458,6348	1/1:0,95:95:99:3967,286,0	1/1:0,136:136:99:5679,409,0	0/0:94,0:94:99:0,283,3925	1/1:0,8:8:24.08:334,24,0	0/0:179,0:179:99:0,539,7475	1/1:0,18:18:54.18:752,54,0	0/0:175,0:175:99:0,527,7308	0/0:199,0:199:99:0,599,8310	0/0:178,0:178:99:0,536,7433	0/0:163,0:163:99:0,491,6807	0/0:183,0:183:99:0,551,7642	0/0:191,0:191:99:0,575,7976	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	0/0:157,0:157:99:0,473,6556	1/1:0,76:76:99:3174,229,0	0/0:163,0:163:99:0,491,6807
gi|293339394|gb|GU595196.1|	87320	.	G	C	3424.37	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.966;DP=3132;Dels=0.00;FS=2.979;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.077;QD=41.76;ReadPosRankSum=-3.507;SB=-1586.91	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:126,0:126:99:0,379,5262	0/0:189,0:189:99:0,569,7893	0/0:89,0:89:99:0,268,3717	1/1:0,34:34:99:1420,102,0	0/0:173,0:173:99:0,521,7225	1/1:0,48:48:99:2004,144,0	0/0:170,0:170:99:0,512,7099	0/0:198,0:198:99:0,596,8269	0/0:175,0:175:99:0,527,7308	0/0:155,0:155:99:0,467,6473	0/0:181,0:181:99:0,545,7559	0/0:187,0:187:99:0,563,7809	0/0:162,0:162:99:0,488,6765	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:145,0:145:99:0,436,6055	0/0:94,0:94:99:0,283,3925	0/0:176,0:176:99:0,530,7350
gi|293339394|gb|GU595196.1|	87353	.	G	T	8393.85	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.609;DP=3230;Dels=0.00;FS=20.637;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.448;QD=41.76;ReadPosRankSum=3.230;SB=-3340.85	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:191,0:191:99:0,575,7976	0/0:120,0:120:99:0,361,5011	0/0:195,0:195:99:0,587,8143	0/0:86,0:86:99:0,259,3591	1/1:0,80:80:99:3341,241,0	0/0:157,0:157:99:0,473,6556	1/1:0,121:121:99:5053,364,0	0/0:143,0:143:99:0,430,5972	0/0:177,0:177:99:0,533,7392	0/0:181,0:181:99:0,545,7559	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	0/0:144,0:144:99:0,433,6013	0/0:78,0:78:99:0,235,3257	0/0:181,0:181:99:0,545,7559
gi|293339394|gb|GU595196.1|	87405	.	T	C	8644.41	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.871;DP=3279;Dels=0.00;FS=24.959;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.012;QD=41.76;ReadPosRankSum=-0.203;SB=-3466.13	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:151,0:151:99:0,455,6306	0/0:126,0:126:99:0,379,5262	0/0:179,0:179:99:0,539,7475	0/0:99,0:99:99:0,298,4134	1/1:0,87:87:99:3633,262,0	0/0:160,0:160:99:0,482,6682	1/1:0,120:120:99:5011,361,0	0/0:180,0:180:99:0,542,7517	0/0:164,0:164:99:0,494,6849	0/0:190,0:190:99:0,572,7934	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	0/0:193,0:193:99:0,581,8060	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:160,0:160:99:0,482,6682	0/0:68,0:68:99:0,205,2840	0/0:203,0:203:99:0,611,8477
gi|293339394|gb|GU595196.1|	87437	.	G	T	7600.40	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.554;DP=3283;Dels=0.00;FS=50.796;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.650;QD=41.76;ReadPosRankSum=-1.738;SB=-2463.88	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:119,0:119:99:0,358,4969	0/0:168,0:168:99:0,506,7016	0/0:92,0:92:99:0,277,3842	1/1:0,80:80:99:3341,241,0	0/0:191,0:191:99:0,575,7976	1/1:0,102:102:99:4260,307,0	0/0:179,0:179:99:0,539,7475	0/0:183,0:183:99:0,551,7642	0/0:177,0:177:99:0,533,7392	0/0:182,0:182:99:0,548,7600	0/0:163,0:163:99:0,491,6807	0/0:178,0:178:99:0,536,7433	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:151,0:151:99:0,455,6306	0/0:181,0:181:99:0,545,7559	0/0:175,0:175:99:0,527,7308	0/0:89,0:89:99:0,268,3717	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	87459	.	A	G	6556.39	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.160;DP=3227;Dels=0.00;FS=39.513;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.663;QD=41.76;ReadPosRankSum=0.110;SB=-2171.56	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:175,0:175:99:0,527,7308	0/0:128,0:128:99:0,385,5345	0/0:161,0:161:99:0,485,6723	0/0:82,0:82:99:0,247,3424	1/1:0,73:73:99:3049,220,0	0/0:220,0:220:99:0,662,9187	1/1:0,84:84:99:3508,253,0	0/0:157,0:157:99:0,473,6556	0/0:183,0:183:99:0,551,7642	0/0:169,0:169:99:0,509,7057	0/0:191,0:191:99:0,575,7976	0/0:153,0:153:99:0,461,6389	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:152,0:152:99:0,458,6348	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:176,0:176:99:0,530,7350	0/0:104,0:104:99:0,313,4343	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	87548	.	A	C	30485.06	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.127;DP=3129;Dels=0.00;FS=1.526;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.784;QD=41.76;ReadPosRankSum=-0.084;SB=-14950.22	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	1/1:0,127:127:99:5304,382,0	1/1:0,190:190:99:7934,572,0	0/0:89,0:89:99:0,268,3717	1/1:0,48:48:99:2004,144,0	0/0:171,0:171:99:0,515,7141	1/1:0,84:84:99:3508,253,0	0/0:175,0:175:99:0,527,7308	0/0:170,0:170:99:0,512,7099	0/0:171,0:171:99:0,515,7141	0/0:145,0:145:99:0,436,6055	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:189,0:189:99:0,569,7893	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:159,0:159:99:0,479,6640	0/0:131,0:131:99:0,394,5471	1/1:0,72:72:99:3007,217,0	1/1:0,209:209:99:8728,629,0
gi|293339394|gb|GU595196.1|	87611	.	C	T	8059.76	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.197;DP=3308;Dels=0.00;FS=57.555;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.303;QD=41.76;ReadPosRankSum=-1.383;SB=-2672.68	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:138,0:138:99:0,415,5763	0/0:164,0:164:99:0,494,6849	0/0:88,0:88:99:0,265,3675	1/1:0,82:82:99:3424,247,0	0/0:194,0:194:99:0,584,8102	1/1:0,111:111:99:4635,334,0	0/0:187,0:187:99:0,563,7809	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	0/0:190,0:190:99:0,572,7934	0/0:191,0:191:99:0,575,7976	0/0:183,0:183:99:0,551,7642	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:87,0:87:99:0,262,3633	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	87635	.	C	T	7642.16	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.653;DP=3326;Dels=0.00;FS=29.767;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.116;QD=41.76;ReadPosRankSum=4.461;SB=-2923.24	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/0:135,0:135:99:0,406,5638	0/0:173,0:173:99:0,521,7225	0/0:87,0:87:99:0,262,3633	1/1:0,67:67:99:2798,202,0	0/0:192,0:192:99:0,578,8018	1/1:0,116:116:99:4844,349,0	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:147,0:147:99:0,442,6139	0/0:195,0:195:99:0,587,8143	0/0:175,0:175:99:0,527,7308	0/0:184,0:184:99:0,554,7684	0/0:168,0:168:99:0,506,7016	0/0:188,0:188:99:0,566,7851	0/0:169,0:169:99:0,509,7057	0/0:83,0:83:99:0,250,3466	0/0:210,0:210:99:0,632,8770
gi|293339394|gb|GU595196.1|	87665	.	C	T	8185.04	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.976;DP=3250;Dels=0.00;FS=25.056;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.307;QD=41.76;ReadPosRankSum=-0.303;SB=-3173.80	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:147,0:147:99:0,442,6139	0/0:126,0:126:99:0,379,5262	0/0:193,0:193:99:0,581,8060	0/0:91,0:91:99:0,274,3800	1/1:0,78:78:99:3257,235,0	0/0:173,0:173:99:0,521,7225	1/1:0,118:118:99:4928,355,0	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:154,0:154:99:0,464,6431	0/0:157,0:157:99:0,473,6556	0/0:166,0:166:99:0,500,6932	0/0:194,0:194:99:0,584,8102	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:179,0:179:99:0,539,7475	0/0:88,0:88:99:0,265,3675	0/0:214,0:214:99:0,644,8937
gi|293339394|gb|GU595196.1|	87680	.	T	C	6639.91	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.222;DP=3217;Dels=0.00;FS=17.365;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.785;QD=41.76;ReadPosRankSum=6.843;SB=-2589.16	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:122,0:122:99:0,367,5095	0/0:177,0:177:99:0,533,7392	0/0:99,0:99:99:0,298,4134	1/1:0,66:66:99:2756,199,0	0/0:172,0:172:99:0,518,7183	1/1:0,93:93:99:3884,280,0	0/0:166,0:166:99:0,500,6932	0/0:187,0:187:99:0,563,7809	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	0/0:152,0:152:99:0,458,6348	0/0:197,0:197:99:0,593,8227	0/0:158,0:158:99:0,476,6598	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	0/0:85,0:85:99:0,256,3550	0/0:219,0:219:99:0,659,9146
gi|293339394|gb|GU595196.1|	87718	.	C	A	60.58	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.446;DP=3012;Dels=0.00;FS=6.011;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8323;MQ=254.00;MQ0=0;MQRankSum=0.331;QD=20.19;ReadPosRankSum=-2.966;SB=-0.02	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:107,0:107:99:0,322,4468	0/0:173,0:173:99:0,521,7225	0/0:89,0:89:99:0,268,3717	1/1:0,2:2:6.02:84,6,0	0/0:175,0:175:99:0,527,7308	1/1:0,1:1:3.01:42,3,0	0/0:152,0:152:99:0,458,6348	0/0:192,0:192:99:0,578,8018	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:145,0:145:99:0,436,6055	0/0:157,0:157:99:0,473,6556	0/0:192,0:192:99:0,578,8018	0/0:169,0:169:99:0,509,7057	0/0:195,0:195:99:0,587,8143	0/0:173,0:173:99:0,521,7225	0/0:143,0:143:99:0,430,5972	0/0:72,0:72:99:0,217,3007	0/0:209,0:209:99:0,629,8728
gi|293339394|gb|GU595196.1|	87728	.	A	G	748.93	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.474;DP=3044;Dels=0.00;FS=0.838;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-0.968;QD=37.45;ReadPosRankSum=-3.052;SB=-371.72	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:155,0:155:99:0,467,6473	0/0:120,0:120:99:0,361,5011	0/0:180,0:180:99:0,542,7517	0/0:85,0:85:99:0,256,3550	1/1:0,10:10:30.10:418,30,0	0/0:179,0:179:99:0,539,7475	1/1:0,10:10:30.10:418,30,0	0/0:157,0:157:99:0,473,6556	0/0:181,0:181:99:0,545,7559	0/0:171,0:171:99:0,515,7141	0/0:158,0:158:99:0,476,6598	0/0:154,0:154:99:0,464,6431	0/0:153,0:153:99:0,461,6389	0/0:189,0:189:99:0,569,7893	0/0:175,0:175:99:0,527,7308	0/0:191,0:191:99:0,575,7976	0/0:171,0:171:99:0,515,7141	0/0:145,0:145:99:0,436,6055	0/0:79,0:79:99:0,238,3299	0/0:209,0:209:99:0,629,8728
gi|293339394|gb|GU595196.1|	87734	.	G	C	748.93	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.193;DP=3056;Dels=0.00;FS=0.842;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-0.747;QD=37.45;ReadPosRankSum=0.716;SB=-371.72	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:153,0:153:99:0,461,6389	0/0:112,0:112:99:0,337,4677	0/0:173,0:173:99:0,521,7225	0/0:83,0:83:99:0,250,3466	1/1:0,10:10:30.10:418,30,0	0/0:190,0:190:99:0,572,7934	1/1:0,10:10:30.10:418,30,0	0/0:157,0:157:99:0,473,6556	0/0:187,0:187:99:0,563,7809	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:147,0:147:99:0,442,6139	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:188,0:188:99:0,566,7851	0/0:163,0:163:99:0,491,6807	0/0:151,0:151:99:0,455,6306	0/0:89,0:89:99:0,268,3717	0/0:218,0:218:99:0,656,9104
gi|293339394|gb|GU595196.1|	87806	.	G	C	3591.41	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.179;DP=3241;Dels=0.00;FS=1.289;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.219;QD=41.76;ReadPosRankSum=-2.605;SB=-1753.95	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	0/0:136,0:136:99:0,409,5679	0/0:201,0:201:99:0,605,8394	0/0:105,0:105:99:0,316,4385	1/1:0,31:31:93.31:1295,93,0	0/0:184,0:184:99:0,554,7684	1/1:0,55:55:99:2297,166,0	0/0:186,0:186:99:0,560,7767	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:178,0:178:99:0,536,7433	0/0:171,0:171:99:0,515,7141	0/0:190,0:190:99:0,572,7934	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:182,0:182:99:0,548,7600	0/0:78,0:78:99:0,235,3257	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	87824	.	T	A	6723.43	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.015;DP=3263;Dels=0.00;FS=1.268;HRun=4;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.489;QD=41.76;ReadPosRankSum=3.072;SB=-3257.32	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:151,0:151:99:0,455,6306	0/0:134,0:134:99:0,403,5596	0/0:190,0:190:99:0,572,7934	0/0:107,0:107:99:0,322,4468	1/1:0,64:64:99:2673,193,0	0/0:168,0:168:99:0,506,7016	1/1:0,97:97:99:4051,292,0	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:196,0:196:99:0,590,8185	0/0:166,0:166:99:0,500,6932	0/0:180,0:180:99:0,542,7517	0/0:176,0:176:99:0,530,7350	0/0:181,0:181:99:0,545,7559	0/0:164,0:164:99:0,494,6849	0/0:194,0:194:99:0,584,8102	0/0:184,0:184:99:0,554,7684	0/0:74,0:74:99:0,223,3090	0/0:183,0:183:99:0,551,7642
gi|293339394|gb|GU595196.1|	87881	.	T	G	4009.01	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.617;DP=3111;Dels=0.00;FS=2.707;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.855;QD=41.76;ReadPosRankSum=-1.682;SB=-1879.23	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:182,0:182:99:0,548,7600	0/0:116,0:116:99:0,349,4844	0/0:164,0:164:99:0,494,6849	0/0:93,0:93:99:0,280,3884	1/1:0,37:37:99:1545,111,0	0/0:174,0:174:99:0,524,7266	1/1:0,59:59:99:2464,178,0	0/0:160,0:160:99:0,482,6682	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:150,0:150:99:0,452,6264	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	0/0:162,0:162:99:0,488,6765	0/0:88,0:88:99:0,265,3675	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	87882	.	G	T	3633.17	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.876;DP=3090;Dels=0.00;FS=1.275;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.682;QD=41.76;ReadPosRankSum=-1.475;SB=-1753.95	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:181,0:181:99:0,545,7559	0/0:116,0:116:99:0,349,4844	0/0:158,0:158:99:0,476,6598	0/0:92,0:92:99:0,277,3842	1/1:0,32:32:96.32:1336,96,0	0/0:182,0:182:99:0,548,7600	1/1:0,55:55:99:2297,166,0	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:180,0:180:99:0,542,7517	0/0:148,0:148:99:0,445,6181	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	0/0:85,0:85:99:0,256,3550	0/0:212,0:212:99:0,638,8853
gi|293339394|gb|GU595196.1|	87911	.	T	G	15785.42	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.443;DP=3004;Dels=0.00;FS=0.831;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9953;MQ=254.00;MQ0=0;MQRankSum=-1.455;QD=41.76;ReadPosRankSum=0.668;SB=-7848.70	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	1/1:0,121:121:99:5053,364,0	1/1:0,161:161:99:6723,485,0	0/0:75,0:75:99:0,226,3132	./.	0/0:202,0:202:99:0,608,8436	1/1:0,5:5:15.05:209,15,0	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:180,0:180:99:0,542,7517	0/0:159,0:159:99:0,479,6640	0/0:145,0:145:99:0,436,6055	0/0:150,0:150:99:0,452,6264	0/0:188,0:188:99:0,566,7851	0/0:167,0:167:99:0,503,6974	0/0:191,0:191:99:0,575,7976	0/0:141,0:141:99:0,424,5888	0/0:163,0:163:99:0,491,6807	1/1:0,91:91:99:3800,274,0	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	87922	.	A	G	34.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.608;DP=3043;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.0952;InbreedingCoeff=0.8839;MQ=254.00;MQ0=0;MQRankSum=0.310;QD=17.25;ReadPosRankSum=-2.283;SB=-38.87	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:121,0:121:99:0,364,5053	0/0:172,0:172:99:0,518,7183	0/0:77,0:77:99:0,232,3216	1/1:0,2:2:6.02:84,6,0	0/0:198,0:198:99:0,596,8269	0/0:22,0:22:66.22:0,66,919	0/0:158,0:158:99:0,476,6598	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:172,0:172:99:0,518,7183	0/0:134,0:134:99:0,403,5596	0/0:160,0:160:99:0,482,6682	0/0:190,0:190:99:0,572,7934	0/0:180,0:180:99:0,542,7517	0/0:186,0:186:99:0,560,7767	0/0:140,0:140:99:0,421,5846	0/0:170,0:170:99:0,512,7099	0/0:84,0:84:99:0,253,3508	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	87932	.	G	A	1710.01	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.304;DP=3114;Dels=0.00;FS=22.559;HRun=1;HaplotypeScore=0.0952;InbreedingCoeff=0.9979;MQ=254.00;MQ0=0;MQRankSum=-0.928;QD=39.77;ReadPosRankSum=-0.648;SB=-500.47	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:123,0:123:99:0,370,5137	0/0:172,0:172:99:0,518,7183	0/0:85,0:85:99:0,256,3550	1/1:0,7:7:21.07:292,21,0	0/0:190,0:190:99:0,572,7934	1/1:0,36:36:99:1503,108,0	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:171,0:171:99:0,515,7141	0/0:135,0:135:99:0,406,5638	0/0:161,0:161:99:0,485,6723	0/0:195,0:195:99:0,587,8143	0/0:176,0:176:99:0,530,7350	0/0:188,0:188:99:0,566,7851	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:89,0:89:99:0,268,3717	0/0:199,0:199:99:0,599,8310
gi|293339394|gb|GU595196.1|	88019	.	C	T	5846.47	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.257;DP=3226;Dels=0.00;FS=16.117;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.714;QD=41.76;ReadPosRankSum=0.548;SB=-2338.60	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:123,0:123:99:0,370,5137	0/0:175,0:175:99:0,527,7308	0/0:88,0:88:99:0,265,3675	1/1:0,49:49:99:2046,147,0	0/0:158,0:158:99:0,476,6598	1/1:0,91:91:99:3800,274,0	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:183,0:183:99:0,551,7642	0/0:175,0:175:99:0,527,7308	0/0:192,0:192:99:0,578,8018	0/0:153,0:153:99:0,461,6389	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	0/0:91,0:91:99:0,274,3800	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	88049	.	T	C	23260.52	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.772;DP=3261;Dels=0.00;FS=6.450;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.389;QD=41.76;ReadPosRankSum=-1.761;SB=-11066.51	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:181,0:181:99:0,545,7559	1/1:0,132:132:99:5512,397,0	1/1:0,184:184:99:7684,554,0	0/0:82,0:82:99:0,247,3424	1/1:0,54:54:99:2255,163,0	0/0:157,0:157:99:0,473,6556	1/1:0,104:104:99:4343,313,0	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:155,0:155:99:0,467,6473	0/0:201,0:201:99:0,605,8394	0/0:163,0:163:99:0,491,6807	0/0:186,0:186:99:0,560,7767	0/0:169,0:169:99:0,509,7057	0/0:185,0:185:99:0,557,7726	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:181,0:181:99:0,545,7559	1/1:0,83:83:99:3466,250,0	0/0:188,0:188:99:0,566,7851
gi|293339394|gb|GU595196.1|	88067	.	A	G	6598.15	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.388;DP=3224;Dels=0.00;FS=20.521;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.292;QD=41.76;ReadPosRankSum=1.426;SB=-2630.92	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:177,0:177:99:0,533,7392	0/0:119,0:119:99:0,358,4969	0/0:181,0:181:99:0,545,7559	0/0:101,0:101:99:0,304,4218	1/1:0,48:48:99:2004,144,0	0/0:146,0:146:99:0,439,6097	1/1:0,110:110:99:4594,331,0	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:189,0:189:99:0,569,7893	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	0/0:182,0:182:99:0,548,7600	0/0:173,0:173:99:0,521,7225	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	0/0:66,0:66:99:0,199,2756	0/0:187,0:187:99:0,563,7809
gi|293339394|gb|GU595196.1|	88112	.	A	C	27478.32	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.407;DP=3101;Dels=0.00;FS=1.801;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.234;QD=41.76;ReadPosRankSum=-0.742;SB=-13488.58	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:172,0:172:99:0,518,7183	1/1:0,124:124:99:5178,373,0	1/1:0,184:184:99:7684,554,0	0/0:86,0:86:99:0,259,3591	1/1:0,23:23:69.23:960,69,0	0/0:176,0:176:99:0,530,7350	1/1:0,40:40:99:1670,120,0	0/0:171,0:171:99:0,515,7141	0/0:185,0:185:99:0,557,7726	0/0:171,0:171:99:0,515,7141	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:157,0:157:99:0,473,6556	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	1/1:0,80:80:99:3341,241,0	1/1:0,207:207:99:8644,623,0
gi|293339394|gb|GU595196.1|	88125	.	T	G	273.33	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.752;DP=3054;Dels=0.00;FS=11.549;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9979;MQ=254.00;MQ0=0;MQRankSum=1.787;QD=34.17;ReadPosRankSum=-4.562;SB=-40.87	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:171,0:171:99:0,515,7141	0/0:125,0:125:99:0,376,5220	0/0:179,0:179:99:0,539,7475	0/0:94,0:94:99:0,283,3925	./.	0/0:179,0:179:99:0,539,7475	1/1:0,8:8:24.08:334,24,0	0/0:170,0:170:99:0,512,7099	0/0:188,0:188:99:0,566,7851	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:156,0:156:99:0,470,6515	0/0:170,0:170:99:0,512,7099	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:163,0:163:99:0,491,6807	0/0:82,0:82:99:0,247,3424	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	88133	.	T	C	1041.07	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.592;DP=3082;Dels=0.00;FS=1.550;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.848;QD=38.56;ReadPosRankSum=-6.652;SB=-499.91	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:175,0:175:99:0,527,7308	0/0:136,0:136:99:0,409,5679	0/0:168,0:168:99:0,506,7016	0/0:94,0:94:99:0,283,3925	1/1:0,15:15:45.15:626,45,0	0/0:183,0:183:99:0,551,7642	1/1:0,12:12:36.12:501,36,0	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:151,0:151:99:0,455,6306	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:91,0:91:99:0,274,3800	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	88169	.	C	T	15952.47	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.173;DP=3275;Dels=0.00;FS=12.476;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.291;QD=41.76;ReadPosRankSum=2.159;SB=-7015.75	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:171,0:171:99:0,515,7141	0/0:152,0:152:99:0,458,6348	0/0:165,0:165:99:0,497,6890	0/0:87,0:87:99:0,262,3633	1/1:0,86:86:99:3591,259,0	0/0:181,0:181:99:0,545,7559	1/1:0,117:117:99:4886,352,0	0/0:187,0:187:99:0,563,7809	0/0:157,0:157:99:0,473,6556	0/0:155,0:155:99:0,467,6473	0/0:179,0:179:99:0,539,7475	0/0:170,0:170:99:0,512,7099	0/0:187,0:187:99:0,563,7809	0/0:151,0:151:99:0,455,6306	0/0:160,0:160:99:0,482,6682	0/0:176,0:176:99:0,530,7350	0/0:192,0:192:99:0,578,8018	0/0:162,0:162:99:0,488,6765	0/0:91,0:91:99:0,274,3800	1/1:0,179:179:99:7475,539,0
gi|293339394|gb|GU595196.1|	88187	.	C	T	8602.65	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.285;DP=3418;Dels=0.00;FS=10.713;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.274;QD=41.76;ReadPosRankSum=-2.026;SB=-3716.69	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:181,0:181:99:0,545,7559	0/0:146,0:146:99:0,439,6097	0/0:169,0:169:99:0,509,7057	0/0:89,0:89:99:0,268,3717	0/0:101,0:101:99:0,304,4218	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:200,0:200:99:0,602,8352	0/0:157,0:157:99:0,473,6556	0/0:155,0:155:99:0,467,6473	0/0:196,0:196:99:0,590,8185	0/0:175,0:175:99:0,527,7308	0/0:196,0:196:99:0,590,8185	0/0:166,0:166:99:0,500,6932	0/0:148,0:148:99:0,445,6181	0/0:190,0:190:99:0,572,7934	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:85,0:85:99:0,256,3550	1/1:0,206:206:99:8603,620,0
gi|293339394|gb|GU595196.1|	88229	.	T	C	3129.05	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.650;DP=3159;Dels=0.00;FS=2.483;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.638;QD=40.64;ReadPosRankSum=-7.237;SB=-1503.39	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:188,0:188:99:0,566,7851	0/0:105,0:105:99:0,316,4385	0/0:164,0:164:99:0,494,6849	0/0:99,0:99:99:0,298,4134	1/1:0,30:30:90.30:1253,90,0	0/0:163,0:163:99:0,491,6807	1/1:0,47:47:99:1963,141,0	0/0:181,0:181:99:0,545,7559	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:182,0:182:99:0,548,7600	0/0:152,0:152:99:0,458,6348	0/0:178,0:178:99:0,536,7433	0/0:182,0:182:99:0,548,7600	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:183,0:183:99:0,551,7642	0/0:62,0:62:99:0,187,2589	0/0:229,0:229:99:0,689,9563
gi|293339394|gb|GU595196.1|	88239	.	A	C	2377.37	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.142;DP=3121;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.308;QD=40.29;ReadPosRankSum=-7.926;SB=-1210.27	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:102,0:102:99:0,307,4260	0/0:162,0:162:99:0,488,6765	0/0:97,0:97:99:0,292,4051	1/1:0,18:18:54.18:752,54,0	0/0:170,0:170:99:0,512,7099	1/1:0,41:41:99:1712,123,0	0/0:167,0:167:99:0,503,6974	0/0:178,0:178:99:0,536,7433	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:179,0:179:99:0,539,7475	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:152,0:152:99:0,458,6348	0/0:179,0:179:99:0,539,7475	0/0:181,0:181:99:0,545,7559	0/0:60,0:60:99:0,181,2506	0/0:230,0:230:99:0,692,9605
gi|293339394|gb|GU595196.1|	88244	.	A	G	1667.47	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.875;DP=3049;Dels=0.00;FS=0.571;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.619;QD=39.70;ReadPosRankSum=-1.794;SB=-832.67	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:106,0:106:99:0,319,4427	0/0:166,0:166:99:0,500,6932	0/0:91,0:91:99:0,274,3800	1/1:0,12:12:36.12:501,36,0	0/0:167,0:167:99:0,503,6974	1/1:0,30:30:90.30:1253,90,0	0/0:157,0:157:99:0,473,6556	0/0:177,0:177:99:0,533,7392	0/0:176,0:176:99:0,530,7350	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:160,0:160:99:0,482,6682	0/0:144,0:144:99:0,433,6013	0/0:184,0:184:99:0,554,7684	0/0:176,0:176:99:0,530,7350	0/0:61,0:61:99:0,184,2547	0/0:214,0:214:99:0,644,8937
gi|293339394|gb|GU595196.1|	88288	.	T	A	7475.12	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.598;DP=3278;Dels=0.00;FS=16.795;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.688;QD=41.76;ReadPosRankSum=0.920;SB=-3048.52	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:124,0:124:99:0,373,5178	0/0:201,0:201:99:0,605,8394	0/0:86,0:86:99:0,259,3591	1/1:0,63:63:99:2631,190,0	0/0:165,0:165:99:0,497,6890	1/1:0,116:116:99:4844,349,0	0/0:184,0:184:99:0,554,7684	0/0:183,0:183:99:0,551,7642	0/0:177,0:177:99:0,533,7392	0/0:178,0:178:99:0,536,7433	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:172,0:172:99:0,518,7183	0/0:143,0:143:99:0,430,5972	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:182,0:182:99:0,548,7600	0/0:82,0:82:99:0,247,3424	0/0:210,0:210:99:0,632,8770
gi|293339394|gb|GU595196.1|	88289	.	T	C	7516.88	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.017;DP=3278;Dels=0.00;FS=17.614;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.492;QD=41.76;ReadPosRankSum=1.030;SB=-3048.52	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:127,0:127:99:0,382,5304	0/0:199,0:199:99:0,599,8310	0/0:88,0:88:99:0,265,3675	1/1:0,64:64:99:2673,193,0	0/0:167,0:167:99:0,503,6974	1/1:0,116:116:99:4844,349,0	0/0:184,0:184:99:0,554,7684	0/0:180,0:180:99:0,542,7517	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:158,0:158:99:0,476,6598	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:145,0:145:99:0,436,6055	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:180,0:180:99:0,542,7517	0/0:83,0:83:99:0,250,3466	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	88344	.	G	T	9688.42	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.012;DP=3273;Dels=0.00;FS=30.806;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.015;QD=41.76;ReadPosRankSum=-1.927;SB=-3758.45	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:166,0:166:99:0,500,6932	0/0:114,0:114:99:0,343,4761	0/0:185,0:185:99:0,557,7726	0/0:94,0:94:99:0,283,3925	1/1:0,108:108:99:4510,325,0	0/0:172,0:172:99:0,518,7183	1/1:0,124:124:99:5178,373,0	0/0:193,0:193:99:0,581,8060	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:187,0:187:99:0,563,7809	0/0:155,0:155:99:0,467,6473	0/0:171,0:171:99:0,515,7141	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	0/0:150,0:150:99:0,452,6264	0/0:163,0:163:99:0,491,6807	0/0:181,0:181:99:0,545,7559	0/0:76,0:76:99:0,229,3174	0/0:206,0:206:99:0,620,8603
gi|293339394|gb|GU595196.1|	88373	.	C	T	9730.18	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.215;DP=3302;Dels=0.00;FS=37.520;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.375;QD=41.76;ReadPosRankSum=2.379;SB=-3716.69	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:168,0:168:99:0,506,7016	0/0:116,0:116:99:0,349,4844	0/0:154,0:154:99:0,464,6431	0/0:97,0:97:99:0,292,4051	1/1:0,96:96:99:4009,289,0	0/0:184,0:184:99:0,554,7684	1/1:0,137:137:99:5721,412,0	0/0:184,0:184:99:0,554,7684	0/0:181,0:181:99:0,545,7559	0/0:172,0:172:99:0,518,7183	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:149,0:149:99:0,448,6222	0/0:180,0:180:99:0,542,7517	0/0:90,0:90:99:0,271,3758	0/0:228,0:228:99:0,686,9521
gi|293339394|gb|GU595196.1|	88448	.	T	C	35078.70	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.159;DP=3293;Dels=0.00;FS=4.719;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.485;QD=41.76;ReadPosRankSum=-1.070;SB=-16745.91	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	1/1:0,129:129:99:5387,388,0	1/1:0,193:193:99:8060,581,0	0/0:104,0:104:99:0,313,4343	1/1:0,97:97:99:4051,292,0	0/0:159,0:159:99:0,479,6640	1/1:0,119:119:99:4969,358,0	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:135,0:135:99:0,406,5638	0/0:170,0:170:99:0,512,7099	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:189,0:189:99:0,569,7893	0/0:194,0:194:99:0,584,8102	1/1:0,88:88:99:3675,265,0	1/1:0,214:214:99:8937,644,0
gi|293339394|gb|GU595196.1|	88472	.	G	T	11066.51	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-3.442;DP=3314;Dels=0.00;FS=16.045;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.258;QD=41.76;ReadPosRankSum=-0.078;SB=-4718.94	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:150,0:150:99:0,452,6264	0/0:115,0:115:99:0,346,4802	0/0:191,0:191:99:0,575,7976	0/0:102,0:102:99:0,307,4260	1/1:0,125:125:99:5220,376,0	0/0:167,0:167:99:0,503,6974	1/1:0,140:140:99:5846,421,0	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:154,0:154:99:0,464,6431	0/0:205,0:205:99:0,617,8561	0/0:146,0:146:99:0,439,6097	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:157,0:157:99:0,473,6556	0/0:139,0:139:99:0,418,5805	0/0:187,0:187:99:0,563,7809	0/0:194,0:194:99:0,584,8102	0/0:86,0:86:99:0,259,3591	0/0:202,0:202:99:0,608,8436
gi|293339394|gb|GU595196.1|	88538	.	C	T	10231.30	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.132;DP=3370;Dels=0.00;FS=3.320;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.443;QD=41.76;ReadPosRankSum=-0.884;SB=-4927.74	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:169,0:169:99:0,509,7057	0/0:116,0:116:99:0,349,4844	0/0:195,0:195:99:0,587,8143	0/0:110,0:110:99:0,331,4594	1/1:0,108:108:99:4510,325,0	0/0:178,0:178:99:0,536,7433	1/1:0,137:137:99:5721,412,0	0/0:177,0:177:99:0,533,7392	0/0:188,0:188:99:0,566,7851	0/0:179,0:179:99:0,539,7475	0/0:181,0:181:99:0,545,7559	0/0:170,0:170:99:0,512,7099	0/0:183,0:183:99:0,551,7642	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:186,0:186:99:0,560,7767	0/0:152,0:152:99:0,458,6348	0/0:174,0:174:99:0,524,7266	0/0:80,0:80:99:0,241,3341	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	88571	.	G	T	5178.30	.	AC=2;AF=0.048;AN=42;BaseQRankSum=2.136;DP=3321;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.682;QD=41.76;ReadPosRankSum=0.049;SB=-2547.40	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:109,0:109:99:0,328,4552	0/0:179,0:179:99:0,539,7475	0/0:104,0:104:99:0,313,4343	1/1:0,124:124:99:5178,373,0	0/0:199,0:199:99:0,599,8310	0/0:166,0:166:99:0,500,6932	0/0:188,0:188:99:0,566,7851	0/0:155,0:155:99:0,467,6473	0/0:170,0:170:99:0,512,7099	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:181,0:181:99:0,545,7559	0/0:162,0:162:99:0,488,6765	0/0:186,0:186:99:0,560,7767	0/0:146,0:146:99:0,439,6097	0/0:145,0:145:99:0,436,6055	0/0:170,0:170:99:0,512,7099	0/0:75,0:75:99:0,226,3132	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	88667	.	T	C	5428.86	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.929;DP=3272;Dels=0.00;FS=1.419;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.603;QD=41.76;ReadPosRankSum=1.272;SB=-2630.92	GT:AD:DP:GQ:PL	0/0:145,0:145:99:0,436,6055	0/0:152,0:152:99:0,458,6348	0/0:128,0:128:99:0,385,5345	0/0:208,0:208:99:0,626,8686	0/0:86,0:86:99:0,259,3591	1/1:0,130:130:99:5429,391,0	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:171,0:171:99:0,515,7141	0/0:144,0:144:99:0,433,6013	0/0:185,0:185:99:0,557,7726	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:189,0:189:99:0,569,7893	0/0:153,0:153:99:0,461,6389	0/0:156,0:156:99:0,470,6515	0/0:88,0:88:99:0,265,3675	0/0:165,0:165:99:0,497,6890
gi|293339394|gb|GU595196.1|	88727	.	A	G	4134.29	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.212;DP=3177;Dels=0.00;FS=1.190;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.244;QD=41.76;ReadPosRankSum=1.359;SB=-1962.75	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:153,0:153:99:0,461,6389	0/0:110,0:110:99:0,331,4594	0/0:149,0:149:99:0,448,6222	0/0:86,0:86:99:0,259,3591	1/1:0,99:99:99:4134,298,0	0/0:172,0:172:99:0,518,7183	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:147,0:147:99:0,442,6139	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:150,0:150:99:0,452,6264	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	0/0:145,0:145:99:0,436,6055	0/0:172,0:172:99:0,518,7183	0/0:71,0:71:99:0,214,2965	0/0:170,0:170:99:0,512,7099
gi|293339394|gb|GU595196.1|	88820	.	C	T	4593.66	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.108;DP=3352;Dels=0.00;FS=0.348;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.979;QD=41.76;ReadPosRankSum=-0.285;SB=-2255.08	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:165,0:165:99:0,497,6890	0/0:139,0:139:99:0,418,5805	0/0:170,0:170:99:0,512,7099	0/0:94,0:94:99:0,283,3925	1/1:0,110:110:99:4594,331,0	0/0:173,0:173:99:0,521,7225	0/0:150,0:150:99:0,452,6264	0/0:181,0:181:99:0,545,7559	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:152,0:152:99:0,458,6348	0/0:162,0:162:99:0,488,6765	0/0:185,0:185:99:0,557,7726	0/0:140,0:140:99:0,421,5846	0/0:158,0:158:99:0,476,6598	0/0:178,0:178:99:0,536,7433	0/0:198,0:198:99:0,596,8269	0/0:172,0:172:99:0,518,7183	0/0:97,0:97:99:0,292,4051	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	88868	.	C	T	4384.85	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.230;DP=3276;Dels=0.00;FS=0.357;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.422;QD=41.76;ReadPosRankSum=1.685;SB=-2129.80	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:180,0:180:99:0,542,7517	0/0:120,0:120:99:0,361,5011	0/0:177,0:177:99:0,533,7392	0/0:94,0:94:99:0,283,3925	1/1:0,105:105:99:4385,316,0	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:177,0:177:99:0,533,7392	0/0:164,0:164:99:0,494,6849	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:87,0:87:99:0,262,3633	0/0:183,0:183:99:0,551,7642
gi|293339394|gb|GU595196.1|	88898	.	G	A	4718.94	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.545;DP=3349;Dels=0.00;FS=6.008;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.243;QD=41.76;ReadPosRankSum=1.198;SB=-2129.80	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:195,0:195:99:0,587,8143	0/0:121,0:121:99:0,364,5053	0/0:170,0:170:99:0,512,7099	0/0:99,0:99:99:0,298,4134	1/1:0,113:113:99:4719,340,0	0/0:173,0:173:99:0,521,7225	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:159,0:159:99:0,479,6640	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:141,0:141:99:0,424,5888	0/0:193,0:193:99:0,581,8060	0/0:183,0:183:99:0,551,7642	0/0:160,0:160:99:0,482,6682	0/0:182,0:182:99:0,548,7600	0/0:89,0:89:99:0,268,3717	0/0:163,0:163:99:0,491,6807
gi|293339394|gb|GU595196.1|	88928	.	C	T	12277.56	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.261;DP=3247;Dels=0.00;FS=8.465;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.654;QD=41.76;ReadPosRankSum=4.356;SB=-5762.94	GT:AD:DP:GQ:PL	0/0:204,0:204:99:0,614,8519	0/0:185,0:185:99:0,557,7726	1/1:0,88:88:99:3675,265,0	1/1:0,136:136:99:5679,409,0	0/0:89,0:89:99:0,268,3717	0/0:127,0:127:99:0,382,5304	0/0:149,0:149:99:0,448,6222	0/0:171,0:171:99:0,515,7141	0/0:151,0:151:99:0,455,6306	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:160,0:160:99:0,482,6682	0/0:159,0:159:99:0,479,6640	0/0:180,0:180:99:0,542,7517	0/0:210,0:210:99:0,632,8770	0/0:163,0:163:99:0,491,6807	0/0:185,0:185:99:0,557,7726	1/1:0,70:70:99:2923,211,0	0/0:156,0:156:99:0,470,6515
gi|293339394|gb|GU595196.1|	88964	.	T	G	15242.54	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.945;DP=3083;Dels=0.00;FS=3.946;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.825;QD=41.76;ReadPosRankSum=5.382;SB=-7224.56	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:169,0:169:99:0,509,7057	1/1:0,84:84:99:3508,253,0	1/1:0,115:115:99:4802,346,0	0/0:96,0:96:99:0,289,4009	1/1:0,123:123:99:5137,370,0	0/0:164,0:164:99:0,494,6849	0/0:149,0:149:99:0,448,6222	0/0:151,0:151:99:0,455,6306	0/0:139,0:139:99:0,418,5805	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:154,0:154:99:0,464,6431	0/0:158,0:158:99:0,476,6598	0/0:135,0:135:99:0,406,5638	0/0:157,0:157:99:0,473,6556	0/0:192,0:192:99:0,578,8018	0/0:175,0:175:99:0,527,7308	0/0:181,0:181:99:0,545,7559	1/1:0,43:43:99:1796,129,0	0/0:172,0:172:99:0,518,7183
gi|293339394|gb|GU595196.1|	88967	.	C	G	15367.82	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.426;DP=3143;Dels=0.00;FS=4.967;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.295;QD=41.76;ReadPosRankSum=6.231;SB=-7182.80	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:170,0:170:99:0,512,7099	1/1:0,82:82:99:3424,247,0	1/1:0,115:115:99:4802,346,0	0/0:94,0:94:99:0,283,3925	1/1:0,126:126:99:5262,379,0	0/0:168,0:168:99:0,506,7016	0/0:150,0:150:99:0,452,6264	0/0:155,0:155:99:0,467,6473	0/0:149,0:149:99:0,448,6222	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:157,0:157:99:0,473,6556	0/0:141,0:141:99:0,424,5888	0/0:169,0:169:99:0,509,7057	0/0:191,0:191:99:0,575,7976	0/0:181,0:181:99:0,545,7559	0/0:179,0:179:99:0,539,7475	1/1:0,45:45:99:1879,135,0	0/0:183,0:183:99:0,551,7642
gi|293339394|gb|GU595196.1|	89009	.	C	T	13446.85	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.309;DP=3280;Dels=0.00;FS=37.777;HRun=0;HaplotypeScore=4.1899;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.080;QD=41.76;ReadPosRankSum=1.566;SB=-5178.30	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:175,0:175:99:0,527,7308	1/1:0,121:121:99:5053,364,0	1/1:0,128:128:99:5345,385,0	0/0:91,0:91:99:0,274,3800	0/0:94,0:94:99:0,283,3925	0/0:191,0:191:99:0,575,7976	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	0/0:181,0:181:99:0,545,7559	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	0/0:142,0:142:99:0,427,5930	0/0:196,0:196:99:0,590,8185	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:156,0:156:99:0,470,6515	0/0:177,0:177:99:0,533,7392	0/0:187,0:187:99:0,563,7809	1/1:0,73:73:99:3049,220,0	0/0:206,0:206:99:0,620,8603
gi|293339394|gb|GU595196.1|	89012	.	G	A	3674.93	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.929;DP=3298;Dels=0.00;FS=7.952;HRun=0;HaplotypeScore=4.1899;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.289;QD=41.76;ReadPosRankSum=1.426;SB=-1503.39	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:178,0:178:99:0,536,7433	0/0:129,0:129:99:0,388,5387	0/0:135,0:135:99:0,406,5638	0/0:91,0:91:99:0,274,3800	1/1:0,88:88:99:3675,265,0	0/0:189,0:189:99:0,569,7893	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	0/0:185,0:185:99:0,557,7726	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:144,0:144:99:0,433,6013	0/0:199,0:199:99:0,599,8310	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:149,0:149:99:0,448,6222	0/0:174,0:174:99:0,524,7266	0/0:191,0:191:99:0,575,7976	0/0:77,0:77:99:0,232,3216	0/0:200,0:200:99:0,602,8352
gi|293339394|gb|GU595196.1|	89027	.	G	T	16286.55	.	AC=8;AF=0.190;AN=42;BaseQRankSum=1.194;DP=3188;Dels=0.00;FS=26.946;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.873;QD=41.76;ReadPosRankSum=1.924;SB=-6639.91	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:177,0:177:99:0,533,7392	1/1:0,122:122:99:5095,367,0	1/1:0,140:140:99:5846,421,0	0/0:104,0:104:99:0,313,4343	1/1:0,47:47:99:1963,141,0	0/0:193,0:193:99:0,581,8060	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:147,0:147:99:0,442,6139	0/0:184,0:184:99:0,554,7684	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:147,0:147:99:0,442,6139	0/0:174,0:174:99:0,524,7266	0/0:190,0:190:99:0,572,7934	1/1:0,81:81:99:3383,244,0	0/0:178,0:178:99:0,536,7433
gi|293339394|gb|GU595196.1|	89048	.	G	A	1649.83	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.796;DP=3059;Dels=0.00;FS=5.673;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.030;QD=40.24;ReadPosRankSum=-1.826;SB=-668.18	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:139,0:139:99:0,418,5805	0/0:108,0:108:99:0,325,4510	0/0:134,0:134:99:0,403,5596	0/0:102,0:102:99:0,307,4260	1/1:0,41:41:99:1712,123,0	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:152,0:152:99:0,458,6348	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	0/0:153,0:153:99:0,461,6389	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	0/0:152,0:152:99:0,458,6348	0/0:171,0:171:99:0,515,7141	0/0:148,0:148:99:0,445,6181	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:84,0:84:99:0,253,3508	0/0:161,0:161:99:0,485,6723
gi|293339394|gb|GU595196.1|	89057	.	T	G	2443.28	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.526;DP=3107;Dels=0.00;FS=6.194;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.787;QD=40.72;ReadPosRankSum=1.716;SB=-1002.27	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:144,0:144:99:0,433,6013	0/0:106,0:106:99:0,319,4427	0/0:126,0:126:99:0,379,5262	0/0:96,0:96:99:0,289,4009	1/1:0,60:60:99:2506,181,0	0/0:193,0:193:99:0,581,8060	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	0/0:185,0:185:99:0,557,7726	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:159,0:159:99:0,479,6640	0/0:75,0:75:99:0,226,3132	0/0:155,0:155:99:0,467,6473
gi|293339394|gb|GU595196.1|	89078	.	G	T	11943.47	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.501;DP=3203;Dels=0.00;FS=40.401;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.448;QD=41.76;ReadPosRankSum=-0.850;SB=-4468.37	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:169,0:169:99:0,509,7057	1/1:0,97:97:99:4051,292,0	1/1:0,120:120:99:5011,361,0	0/0:108,0:108:99:0,325,4510	0/0:107,0:107:99:0,322,4468	0/0:187,0:187:99:0,563,7809	0/0:192,0:192:99:0,578,8018	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:146,0:146:99:0,439,6097	0/0:183,0:183:99:0,551,7642	0/0:158,0:158:99:0,476,6598	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	1/1:0,69:69:99:2881,208,0	0/0:139,0:139:99:0,418,5805
gi|293339394|gb|GU595196.1|	89126	.	G	A	7057.52	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.191;DP=3224;Dels=0.00;FS=9.434;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.213;QD=41.76;ReadPosRankSum=-0.056;SB=-2965.00	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:98,0:98:99:0,295,4093	0/0:139,0:139:99:0,418,5805	0/0:100,0:100:99:0,301,4176	0/0:111,0:111:99:0,334,4635	0/0:167,0:167:99:0,503,6974	0/0:186,0:186:99:0,560,7767	0/0:173,0:173:99:0,521,7225	0/0:138,0:138:99:0,415,5763	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:187,0:187:99:0,563,7809	0/0:156,0:156:99:0,470,6515	0/0:189,0:189:99:0,569,7893	0/0:82,0:82:99:0,247,3424	1/1:0,169:169:99:7057,509,0
gi|293339394|gb|GU595196.1|	89180	.	G	A	7182.80	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.701;DP=3339;Dels=0.00;FS=58.438;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.300;QD=41.76;ReadPosRankSum=-0.111;SB=-2338.60	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:183,0:183:99:0,551,7642	0/0:132,0:132:99:0,397,5512	0/0:155,0:155:99:0,467,6473	0/0:98,0:98:99:0,295,4093	0/0:107,0:107:99:0,322,4468	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	0/0:192,0:192:99:0,578,8018	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:154,0:154:99:0,464,6431	0/0:186,0:186:99:0,560,7767	0/0:172,0:172:99:0,518,7183	0/0:145,0:145:99:0,436,6055	0/0:182,0:182:99:0,548,7600	0/0:202,0:202:99:0,608,8436	0/0:166,0:166:99:0,500,6932	0/0:84,0:84:99:0,253,3508	1/1:0,172:172:99:7183,518,0
gi|293339394|gb|GU595196.1|	89215	.	A	C	5804.71	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.710;DP=3161;Dels=0.00;FS=7.143;HRun=0;HaplotypeScore=6.6182;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.152;QD=41.76;ReadPosRankSum=3.440;SB=-2505.64	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:87,0:87:99:0,262,3633	0/0:129,0:129:99:0,388,5387	0/0:90,0:90:99:0,271,3758	0/0:87,0:87:99:0,262,3633	0/0:185,0:185:99:0,557,7726	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	0/0:182,0:182:99:0,548,7600	0/0:52,0:52:99:0,157,2172	1/1:0,139:139:99:5805,418,0
gi|293339394|gb|GU595196.1|	89225	.	C	T	8310.33	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.451;DP=3104;Dels=0.00;FS=13.223;HRun=1;HaplotypeScore=9.9511;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.833;QD=41.76;ReadPosRankSum=2.341;SB=-3507.89	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:180,0:180:99:0,542,7517	1/1:0,62:62:99:2589,187,0	1/1:0,96:96:99:4009,289,0	0/0:96,0:96:99:0,289,4009	0/0:84,0:84:99:0,253,3508	0/0:195,0:195:99:0,587,8143	0/0:158,0:158:99:0,476,6598	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:195,0:195:99:0,587,8143	1/1:0,41:41:99:1712,123,0	0/0:125,0:125:99:0,376,5220
gi|293339394|gb|GU595196.1|	89231	.	T	A	4301.33	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.333;DP=3015;Dels=0.00;FS=7.926;HRun=1;HaplotypeScore=4.9041;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.758;QD=41.76;ReadPosRankSum=-1.704;SB=-1837.47	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	0/0:50,0:50:99:0,151,2088	0/0:76,0:76:99:0,229,3174	0/0:97,0:97:99:0,292,4051	0/0:88,0:88:99:0,265,3675	0/0:188,0:188:99:0,566,7851	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:154,0:154:99:0,464,6431	0/0:177,0:177:99:0,533,7392	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	0/0:150,0:150:99:0,452,6264	0/0:203,0:203:99:0,611,8477	0/0:34,0:34:99:0,102,1420	1/1:0,103:103:99:4301,310,0
gi|293339394|gb|GU595196.1|	89234	.	T	C	5762.94	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.666;DP=3010;Dels=0.00;FS=10.065;HRun=0;HaplotypeScore=4.4756;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.035;QD=41.76;ReadPosRankSum=-4.337;SB=-2463.88	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	1/1:0,43:43:99:1796,129,0	1/1:0,67:67:99:2798,202,0	0/0:105,0:105:99:0,316,4385	0/0:90,0:90:99:0,271,3758	0/0:189,0:189:99:0,569,7893	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:184,0:184:99:0,554,7684	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:178,0:178:99:0,536,7433	0/0:153,0:153:99:0,461,6389	0/0:147,0:147:99:0,442,6139	0/0:200,0:200:99:0,602,8352	1/1:0,28:28:84.28:1169,84,0	0/0:94,0:94:99:0,283,3925
gi|293339394|gb|GU595196.1|	89255	.	A	G	3054.05	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.466;DP=2821;Dels=0.00;FS=35.769;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.242;QD=40.18;ReadPosRankSum=3.632;SB=-960.49	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:185,0:185:99:0,557,7726	1/1:0,18:18:54.18:752,54,0	1/1:0,22:22:66.22:919,66,0	0/0:96,0:96:99:0,289,4009	0/0:96,0:96:99:0,289,4009	0/0:188,0:188:99:0,566,7851	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:177,0:177:99:0,533,7392	0/0:179,0:179:99:0,539,7475	0/0:188,0:188:99:0,566,7851	0/0:151,0:151:99:0,455,6306	0/0:164,0:164:99:0,494,6849	0/0:140,0:140:99:0,421,5846	0/0:150,0:150:99:0,452,6264	0/0:200,0:200:99:0,602,8352	1/1:0,17:17:51.17:710,51,0	1/1:0,19:19:57.19:793,57,0
gi|293339394|gb|GU595196.1|	89274	.	A	C	2276.74	.	AC=6;AF=0.150;AN=40;BaseQRankSum=0.760;DP=2812;Dels=0.00;FS=27.383;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.306;QD=39.94;ReadPosRankSum=2.912;SB=-709.93	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:184,0:184:99:0,554,7684	1/1:0,18:18:54.18:752,54,0	1/1:0,22:22:66.22:919,66,0	0/0:88,0:88:99:0,265,3675	0/0:100,0:100:99:0,301,4176	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:183,0:183:99:0,551,7642	0/0:186,0:186:99:0,560,7767	0/0:152,0:152:99:0,458,6348	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	0/0:156,0:156:99:0,470,6515	0/0:161,0:161:99:0,485,6723	0/0:184,0:184:99:0,554,7684	1/1:0,17:17:51.17:710,51,0	./.
gi|293339394|gb|GU595196.1|	89279	.	C	A	272.95	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.483;DP=2814;Dels=0.00;FS=24.624;HRun=0;HaplotypeScore=0.3809;InbreedingCoeff=0.9980;MQ=254.00;MQ0=0;MQRankSum=0.927;QD=34.12;ReadPosRankSum=-3.630;SB=-0.02	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:187,0:187:99:0,563,7809	0/0:30,0:30:90.30:0,90,1253	0/0:31,0:31:93.31:0,93,1295	0/0:82,0:82:99:0,247,3424	0/0:93,0:93:99:0,280,3884	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:154,0:154:99:0,464,6431	0/0:179,0:179:99:0,539,7475	0/0:172,0:172:99:0,518,7183	0/0:152,0:152:99:0,458,6348	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	0/0:159,0:159:99:0,479,6640	0/0:184,0:184:99:0,554,7684	0/0:24,0:24:72.24:0,72,1002	1/1:0,8:8:24.08:334,24,0
gi|293339394|gb|GU595196.1|	89294	.	T	G	4593.66	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.045;DP=2899;Dels=0.00;FS=65.703;HRun=1;HaplotypeScore=2.0473;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.635;QD=41.76;ReadPosRankSum=-3.890;SB=-1211.05	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:188,0:188:99:0,566,7851	1/1:0,37:37:99:1545,111,0	1/1:0,48:48:99:2004,144,0	0/0:89,0:89:99:0,268,3717	0/0:105,0:105:99:0,316,4385	0/0:184,0:184:99:0,554,7684	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	0/0:188,0:188:99:0,566,7851	0/0:156,0:156:99:0,470,6515	0/0:180,0:180:99:0,542,7517	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	0/0:154,0:154:99:0,464,6431	0/0:153,0:153:99:0,461,6389	1/1:0,25:25:75.25:1044,75,0	0/0:43,0:43:99:0,129,1796
gi|293339394|gb|GU595196.1|	89303	.	T	C	8727.93	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.012;DP=2958;Dels=0.00;FS=160.362;HRun=0;HaplotypeScore=2.0473;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.647;QD=41.76;ReadPosRankSum=3.801;SB=-1879.23	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	1/1:0,47:47:99:1963,141,0	1/1:0,63:63:99:2631,190,0	0/0:92,0:92:99:0,277,3842	0/0:105,0:105:99:0,316,4385	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:185,0:185:99:0,557,7726	0/0:154,0:154:99:0,464,6431	0/0:177,0:177:99:0,533,7392	0/0:182,0:182:99:0,548,7600	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:153,0:153:99:0,461,6389	1/1:0,37:37:99:1545,111,0	1/1:0,62:62:99:2589,187,0
gi|293339394|gb|GU595196.1|	89378	.	G	A	9604.90	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.549;DP=3138;Dels=0.00;FS=3.458;HRun=1;HaplotypeScore=4.8565;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.551;QD=41.76;ReadPosRankSum=3.278;SB=-4384.85	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:194,0:194:99:0,584,8102	0/0:68,0:68:99:0,205,2840	0/0:100,0:100:99:0,301,4176	0/0:86,0:86:99:0,259,3591	1/1:0,107:107:99:4468,322,0	0/0:193,0:193:99:0,581,8060	0/0:171,0:171:99:0,515,7141	0/0:202,0:202:99:0,608,8436	0/0:154,0:154:99:0,464,6431	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:145,0:145:99:0,436,6055	0/0:167,0:167:99:0,503,6974	0/0:79,0:79:99:0,238,3299	1/1:0,123:123:99:5137,370,0
gi|293339394|gb|GU595196.1|	89381	.	C	A	4551.90	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.145;DP=3146;Dels=0.00;FS=2.032;HRun=0;HaplotypeScore=5.1898;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.524;QD=41.76;ReadPosRankSum=-0.019;SB=-2255.08	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:192,0:192:99:0,578,8018	0/0:74,0:74:99:0,223,3090	0/0:101,0:101:99:0,304,4218	0/0:86,0:86:99:0,259,3591	1/1:0,109:109:99:4552,328,0	0/0:189,0:189:99:0,569,7893	0/0:165,0:165:99:0,497,6890	0/0:194,0:194:99:0,584,8102	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:185,0:185:99:0,557,7726	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	0/0:141,0:141:99:0,424,5888	0/0:180,0:180:99:0,542,7517	0/0:79,0:79:99:0,238,3299	0/0:111,0:111:99:0,334,4635
gi|293339394|gb|GU595196.1|	89402	.	G	A	1816.87	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.092;DP=3106;Dels=0.00;FS=3.416;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.722;QD=40.37;ReadPosRankSum=-5.677;SB=-793.47	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:188,0:188:99:0,566,7851	0/0:64,0:64:99:0,193,2673	0/0:115,0:115:99:0,346,4802	0/0:83,0:83:99:0,250,3466	0/0:102,0:102:99:0,307,4260	0/0:195,0:195:99:0,587,8143	0/0:156,0:156:99:0,470,6515	0/0:202,0:202:99:0,608,8436	0/0:152,0:152:99:0,458,6348	0/0:163,0:163:99:0,491,6807	0/0:175,0:175:99:0,527,7308	0/0:182,0:182:99:0,548,7600	0/0:176,0:176:99:0,530,7350	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:186,0:186:99:0,560,7767	0/0:152,0:152:99:0,458,6348	0/0:174,0:174:99:0,524,7266	0/0:76,0:76:99:0,229,3174	1/1:0,45:45:99:1879,135,0
gi|293339394|gb|GU595196.1|	89417	.	G	T	1775.11	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.818;DP=3086;Dels=0.00;FS=18.422;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.219;QD=40.34;ReadPosRankSum=-4.497;SB=-584.66	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	0/0:71,0:71:99:0,214,2965	0/0:124,0:124:99:0,373,5178	0/0:91,0:91:99:0,274,3800	0/0:99,0:99:99:0,298,4134	0/0:180,0:180:99:0,542,7517	0/0:150,0:150:99:0,452,6264	0/0:196,0:196:99:0,590,8185	0/0:142,0:142:99:0,427,5930	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	0/0:182,0:182:99:0,548,7600	0/0:174,0:174:99:0,524,7266	0/0:156,0:156:99:0,470,6515	0/0:165,0:165:99:0,497,6890	0/0:194,0:194:99:0,584,8102	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	0/0:76,0:76:99:0,229,3174	1/1:0,44:44:99:1837,132,0
gi|293339394|gb|GU595196.1|	89423	.	T	C	2610.32	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.415;DP=3101;Dels=0.00;FS=19.514;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.777;QD=40.79;ReadPosRankSum=-2.416;SB=-918.75	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:75,0:75:99:0,226,3132	0/0:119,0:119:99:0,358,4969	0/0:90,0:90:99:0,271,3758	0/0:97,0:97:99:0,292,4051	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	0/0:199,0:199:99:0,599,8310	0/0:153,0:153:99:0,461,6389	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:180,0:180:99:0,542,7517	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:194,0:194:99:0,584,8102	0/0:171,0:171:99:0,515,7141	0/0:177,0:177:99:0,533,7392	0/0:68,0:68:99:0,205,2840	1/1:0,64:64:99:2673,193,0
gi|293339394|gb|GU595196.1|	89483	.	G	A	3382.61	.	AC=8;AF=0.190;AN=42;BaseQRankSum=1.532;DP=2852;Dels=0.00;FS=16.227;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.368;QD=41.76;ReadPosRankSum=-9.579;SB=-1210.58	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	1/1:0,17:17:51.17:710,51,0	1/1:0,30:30:90.30:1253,90,0	0/0:107,0:107:99:0,322,4468	0/0:102,0:102:99:0,307,4260	0/0:182,0:182:99:0,548,7600	0/0:149,0:149:99:0,448,6222	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:193,0:193:99:0,581,8060	0/0:162,0:162:99:0,488,6765	0/0:179,0:179:99:0,539,7475	0/0:170,0:170:99:0,512,7099	0/0:152,0:152:99:0,458,6348	0/0:190,0:190:99:0,572,7934	0/0:181,0:181:99:0,545,7559	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	1/1:0,12:12:36.12:501,36,0	1/1:0,22:22:66.22:919,66,0
gi|293339394|gb|GU595196.1|	89486	.	C	T	2302.42	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.157;DP=2807;Dels=0.00;FS=12.043;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9998;MQ=254.00;MQ0=0;MQRankSum=-1.371;QD=39.70;ReadPosRankSum=-9.655;SB=-874.70	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	1/1:0,10:10:30.10:418,30,0	1/1:0,21:21:63.21:877,63,0	0/0:97,0:97:99:0,292,4051	0/0:103,0:103:99:0,310,4301	0/0:179,0:179:99:0,539,7475	0/0:150,0:150:99:0,452,6264	0/0:175,0:175:99:0,527,7308	0/0:177,0:177:99:0,533,7392	0/0:189,0:189:99:0,569,7893	0/0:158,0:158:99:0,476,6598	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:152,0:152:99:0,458,6348	0/0:193,0:193:99:0,581,8060	0/0:175,0:175:99:0,527,7308	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	1/1:0,13:13:39.13:543,39,0	1/1:0,14:14:42.14:585,42,0
gi|293339394|gb|GU595196.1|	89492	.	C	G	398.52	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.312;DP=2746;Dels=0.00;FS=2.612;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=-0.709;QD=36.23;ReadPosRankSum=-3.918;SB=-165.31	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	./.	./.	0/0:89,0:89:99:0,268,3717	0/0:107,0:107:99:0,322,4468	0/0:181,0:181:99:0,545,7559	0/0:154,0:154:99:0,464,6431	0/0:170,0:170:99:0,512,7099	0/0:180,0:180:99:0,542,7517	0/0:183,0:183:99:0,551,7642	0/0:162,0:162:99:0,488,6765	0/0:179,0:179:99:0,539,7475	0/0:164,0:164:99:0,494,6849	0/0:148,0:148:99:0,445,6181	0/0:195,0:195:99:0,587,8143	0/0:173,0:173:99:0,521,7225	0/0:152,0:152:99:0,458,6348	0/0:167,0:167:99:0,503,6974	1/1:0,11:11:33.11:459,33,0	./.
gi|293339394|gb|GU595196.1|	89546	.	G	A	7266.32	.	AC=4;AF=0.105;AN=38;BaseQRankSum=-1.431;DP=2938;Dels=0.00;FS=5.626;HRun=0;HaplotypeScore=1.2104;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.589;QD=41.76;ReadPosRankSum=-0.209;SB=-3215.56	GT:AD:DP:GQ:PL	0/0:195,0:195:99:0,587,8143	0/0:183,0:183:99:0,551,7642	./.	./.	0/0:82,0:82:99:0,247,3424	1/1:0,98:98:99:4093,295,0	0/0:190,0:190:99:0,572,7934	0/0:178,0:178:99:0,536,7433	0/0:187,0:187:99:0,563,7809	0/0:152,0:152:99:0,458,6348	0/0:168,0:168:99:0,506,7016	0/0:184,0:184:99:0,554,7684	0/0:156,0:156:99:0,470,6515	0/0:176,0:176:99:0,530,7350	0/0:172,0:172:99:0,518,7183	0/0:183,0:183:99:0,551,7642	0/0:192,0:192:99:0,578,8018	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	1/1:0,76:76:99:3174,229,0	0/0:23,0:23:69.23:0,69,960
gi|293339394|gb|GU595196.1|	89549	.	G	A	982.55	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-0.060;DP=2913;Dels=0.00;FS=9.501;HRun=0;HaplotypeScore=1.3156;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.030;QD=39.30;ReadPosRankSum=-2.770;SB=-334.10	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:186,0:186:99:0,560,7767	./.	./.	0/0:83,0:83:99:0,250,3466	0/0:102,0:102:99:0,307,4260	0/0:185,0:185:99:0,557,7726	0/0:182,0:182:99:0,548,7600	0/0:181,0:181:99:0,545,7559	0/0:150,0:150:99:0,452,6264	0/0:166,0:166:99:0,500,6932	0/0:181,0:181:99:0,545,7559	0/0:152,0:152:99:0,458,6348	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:179,0:179:99:0,539,7475	0/0:190,0:190:99:0,572,7934	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:74,0:74:99:0,223,3090	1/1:0,25:25:75.25:1044,75,0
gi|293339394|gb|GU595196.1|	89567	.	G	A	6973.99	.	AC=4;AF=0.105;AN=38;BaseQRankSum=1.131;DP=2888;Dels=0.00;FS=15.070;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.562;QD=41.76;ReadPosRankSum=0.877;SB=-2839.72	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	./.	./.	0/0:85,0:85:99:0,256,3550	0/0:108,0:108:99:0,325,4510	0/0:181,0:181:99:0,545,7559	0/0:174,0:174:99:0,524,7266	0/0:180,0:180:99:0,542,7517	0/0:152,0:152:99:0,458,6348	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:180,0:180:99:0,542,7517	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	0/0:191,0:191:99:0,575,7976	0/0:165,0:165:99:0,497,6890	0/0:151,0:151:99:0,455,6306	1/1:0,89:89:99:3717,268,0	1/1:0,78:78:99:3257,235,0
gi|293339394|gb|GU595196.1|	89579	.	G	A	711.15	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.138;DP=2922;Dels=0.00;FS=0.866;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9835;MQ=254.00;MQ0=0;MQRankSum=0.269;QD=37.43;ReadPosRankSum=-6.630;SB=-372.68	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:182,0:182:99:0,548,7600	1/1:0,4:4:12.04:167,12,0	1/1:0,15:15:45.15:626,45,0	0/0:88,0:88:99:0,265,3675	0/0:118,0:118:99:0,355,4928	0/0:196,0:196:99:0,590,8185	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:151,0:151:99:0,455,6306	0/0:167,0:167:99:0,503,6974	0/0:155,0:155:99:0,467,6473	0/0:166,0:166:99:0,500,6932	0/0:181,0:181:99:0,545,7559	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:179,0:179:99:0,539,7475	0/0:155,0:155:99:0,467,6473	0/0:137,0:137:99:0,412,5721	0/0:90,0:90:99:0,271,3758	0/0:103,0:103:99:0,310,4301
gi|293339394|gb|GU595196.1|	89582	.	A	G	1126.04	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.406;DP=2919;Dels=0.00;FS=0.694;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9957;MQ=254.00;MQ0=0;MQRankSum=-0.723;QD=38.83;ReadPosRankSum=-6.786;SB=-579.82	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	1/1:0,6:6:18.06:251,18,0	1/1:0,23:23:69.23:960,69,0	0/0:86,0:86:99:0,259,3591	0/0:117,0:117:99:0,352,4886	0/0:188,0:188:99:0,566,7851	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:150,0:150:99:0,452,6264	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:156,0:156:99:0,470,6515	0/0:136,0:136:99:0,409,5679	0/0:96,0:96:99:0,289,4009	0/0:110,0:110:99:0,331,4594
gi|293339394|gb|GU595196.1|	89676	.	T	A	3507.89	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.245;DP=3095;Dels=0.00;FS=18.311;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.707;QD=41.76;ReadPosRankSum=-0.649;SB=-1252.83	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:76,0:76:99:0,229,3174	0/0:124,0:124:99:0,373,5178	0/0:103,0:103:99:0,310,4301	0/0:103,0:103:99:0,310,4301	0/0:182,0:182:99:0,548,7600	0/0:177,0:177:99:0,533,7392	0/0:183,0:183:99:0,551,7642	0/0:156,0:156:99:0,470,6515	0/0:152,0:152:99:0,458,6348	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	0/0:159,0:159:99:0,479,6640	0/0:170,0:170:99:0,512,7099	0/0:94,0:94:99:0,283,3925	1/1:0,84:84:99:3508,253,0
gi|293339394|gb|GU595196.1|	89677	.	C	G	3549.65	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.558;DP=3083;Dels=0.00;FS=22.384;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.608;QD=41.76;ReadPosRankSum=-0.779;SB=-1211.07	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:161,0:161:99:0,485,6723	0/0:75,0:75:99:0,226,3132	0/0:119,0:119:99:0,358,4969	0/0:105,0:105:99:0,316,4385	0/0:99,0:99:99:0,298,4134	0/0:184,0:184:99:0,554,7684	0/0:180,0:180:99:0,542,7517	0/0:185,0:185:99:0,557,7726	0/0:157,0:157:99:0,473,6556	0/0:149,0:149:99:0,448,6222	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:181,0:181:99:0,545,7559	0/0:156,0:156:99:0,470,6515	0/0:170,0:170:99:0,512,7099	0/0:94,0:94:99:0,283,3925	1/1:0,85:85:99:3550,256,0
gi|293339394|gb|GU595196.1|	89729	.	T	C	10774.18	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.188;DP=2985;Dels=0.00;FS=14.316;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.360;QD=41.76;ReadPosRankSum=0.274;SB=-4927.73	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:174,0:174:99:0,524,7266	0/0:53,0:53:99:0,160,2213	0/0:80,0:80:99:0,241,3341	1/1:0,64:64:99:2673,193,0	1/1:0,105:105:99:4385,316,0	0/0:193,0:193:99:0,581,8060	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:179,0:179:99:0,539,7475	0/0:152,0:152:99:0,458,6348	0/0:172,0:172:99:0,518,7183	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:56,0:56:99:0,169,2339	1/1:0,89:89:99:3717,268,0
gi|293339394|gb|GU595196.1|	89759	.	C	A	3800.21	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.185;DP=3049;Dels=0.00;FS=18.554;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.082;QD=41.76;ReadPosRankSum=3.417;SB=-1378.11	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:161,0:161:99:0,485,6723	0/0:62,0:62:99:0,187,2589	0/0:79,0:79:99:0,238,3299	0/0:61,0:61:99:0,184,2547	0/0:98,0:98:99:0,295,4093	0/0:199,0:199:99:0,599,8310	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:190,0:190:99:0,572,7934	0/0:149,0:149:99:0,448,6222	0/0:169,0:169:99:0,509,7057	0/0:190,0:190:99:0,572,7934	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:180,0:180:99:0,542,7517	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:72,0:72:99:0,217,3007	1/1:0,91:91:99:3800,274,0
gi|293339394|gb|GU595196.1|	89784	.	C	A	1106.95	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.957;DP=2981;Dels=0.00;FS=1.505;HRun=2;HaplotypeScore=1.3332;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.088;QD=39.53;ReadPosRankSum=-4.960;SB=-542.89	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:75,0:75:99:0,226,3132	0/0:88,0:88:99:0,265,3675	0/0:79,0:79:99:0,238,3299	0/0:108,0:108:99:0,325,4510	0/0:186,0:186:99:0,560,7767	0/0:158,0:158:99:0,476,6598	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:164,0:164:99:0,494,6849	0/0:156,0:156:99:0,470,6515	0/0:178,0:178:99:0,536,7433	0/0:160,0:160:99:0,482,6682	0/0:184,0:184:99:0,554,7684	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:176,0:176:99:0,530,7350	0/0:162,0:162:99:0,488,6765	0/0:70,0:70:99:0,211,2923	1/1:0,28:28:84.28:1169,84,0
gi|293339394|gb|GU595196.1|	89789	.	G	A	7892.72	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.165;DP=2975;Dels=0.00;FS=10.088;HRun=0;HaplotypeScore=0.7618;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.443;QD=41.76;ReadPosRankSum=1.426;SB=-3424.36	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:72,0:72:99:0,217,3007	0/0:98,0:98:99:0,295,4093	1/1:0,78:78:99:3257,235,0	1/1:0,111:111:99:4635,334,0	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	0/0:155,0:155:99:0,467,6473	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:178,0:178:99:0,536,7433	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:65,0:65:99:0,196,2714	0/0:16,0:16:48.16:0,48,668
gi|293339394|gb|GU595196.1|	89834	.	G	C	522.32	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.086;DP=3047;Dels=0.00;FS=12.447;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.127;QD=37.31;ReadPosRankSum=-5.458;SB=-125.15	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:92,0:92:99:0,277,3842	0/0:133,0:133:99:0,400,5554	0/0:98,0:98:99:0,295,4093	0/0:111,0:111:99:0,334,4635	0/0:188,0:188:99:0,566,7851	0/0:139,0:139:99:0,418,5805	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:155,0:155:99:0,467,6473	0/0:175,0:175:99:0,527,7308	0/0:87,0:87:99:0,262,3633	1/1:0,14:14:42.14:585,42,0
gi|293339394|gb|GU595196.1|	89840	.	C	T	1775.11	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.471;DP=3077;Dels=0.00;FS=5.408;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.594;QD=40.34;ReadPosRankSum=-7.064;SB=-751.70	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:157,0:157:99:0,473,6556	0/0:98,0:98:99:0,295,4093	0/0:132,0:132:99:0,397,5512	0/0:107,0:107:99:0,322,4468	0/0:111,0:111:99:0,334,4635	0/0:192,0:192:99:0,578,8018	0/0:141,0:141:99:0,424,5888	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:153,0:153:99:0,461,6389	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:86,0:86:99:0,259,3591	1/1:0,44:44:99:1837,132,0
gi|293339394|gb|GU595196.1|	89864	.	A	T	9270.81	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.934;DP=3149;Dels=0.00;FS=7.306;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.045;QD=41.76;ReadPosRankSum=1.303;SB=-4217.81	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:147,0:147:99:0,442,6139	0/0:92,0:92:99:0,277,3842	0/0:151,0:151:99:0,455,6306	1/1:0,105:105:99:4385,316,0	1/1:0,117:117:99:4886,352,0	0/0:185,0:185:99:0,557,7726	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:157,0:157:99:0,473,6556	0/0:151,0:151:99:0,455,6306	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	0/0:166,0:166:99:0,500,6932	0/0:161,0:161:99:0,485,6723	0/0:87,0:87:99:0,262,3633	0/0:148,0:148:99:0,445,6181
gi|293339394|gb|GU595196.1|	89897	.	C	G	31278.51	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.158;DP=3171;Dels=0.00;FS=2.314;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.431;QD=41.76;ReadPosRankSum=-1.050;SB=-15326.06	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	1/1:0,108:108:99:4510,325,0	1/1:0,154:154:99:6431,464,0	1/1:0,82:82:99:3424,247,0	1/1:0,123:123:99:5137,370,0	0/0:183,0:183:99:0,551,7642	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	0/0:167,0:167:99:0,503,6974	0/0:152,0:152:99:0,458,6348	0/0:153,0:153:99:0,461,6389	0/0:159,0:159:99:0,479,6640	0/0:135,0:135:99:0,406,5638	0/0:149,0:149:99:0,448,6222	1/1:0,73:73:99:3049,220,0	1/1:0,209:209:99:8728,629,0
gi|293339394|gb|GU595196.1|	89932	.	A	G	3716.69	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.781;DP=3022;Dels=0.00;FS=4.072;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.669;QD=41.76;ReadPosRankSum=-3.483;SB=-1712.19	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	0/0:90,0:90:99:0,271,3758	0/0:111,0:111:99:0,334,4635	0/0:76,0:76:99:0,229,3174	0/0:85,0:85:99:0,256,3550	0/0:184,0:184:99:0,554,7684	0/0:174,0:174:99:0,524,7266	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:185,0:185:99:0,557,7726	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:146,0:146:99:0,439,6097	0/0:160,0:160:99:0,482,6682	0/0:150,0:150:99:0,452,6264	0/0:56,0:56:99:0,169,2339	1/1:0,89:89:99:3717,268,0
gi|293339394|gb|GU595196.1|	89946	.	C	A	1065.19	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.069;DP=2816;Dels=0.00;FS=4.746;HRun=1;HaplotypeScore=4.3804;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.692;QD=39.45;ReadPosRankSum=-5.755;SB=-459.38	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	0/0:54,0:54:99:0,163,2255	0/0:63,0:63:99:0,190,2631	0/0:48,0:48:99:0,144,2004	0/0:50,0:50:99:0,151,2088	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:179,0:179:99:0,539,7475	0/0:158,0:158:99:0,476,6598	0/0:191,0:191:99:0,575,7976	0/0:156,0:156:99:0,470,6515	0/0:154,0:154:99:0,464,6431	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	0/0:39,0:39:99:0,117,1629	1/1:0,27:27:81.27:1128,81,0
gi|293339394|gb|GU595196.1|	89952	.	A	T	5053.02	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.725;DP=2736;Dels=0.00;FS=13.915;HRun=1;HaplotypeScore=3.4757;InbreedingCoeff=0.9992;MQ=254.00;MQ0=0;MQRankSum=0.648;QD=41.76;ReadPosRankSum=-5.015;SB=-2004.34	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	1/1:0,42:42:99:1754,126,0	1/1:0,47:47:99:1963,141,0	0/0:37,0:37:99:0,111,1545	0/0:42,0:42:99:0,126,1754	0/0:175,0:175:99:0,527,7308	0/0:155,0:155:99:0,467,6473	0/0:196,0:196:99:0,590,8185	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	0/0:160,0:160:99:0,482,6682	0/0:176,0:176:99:0,530,7350	0/0:157,0:157:99:0,473,6556	0/0:183,0:183:99:0,551,7642	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	1/1:0,32:32:96.32:1336,96,0	0/0:8,0:8:24.08:0,24,334
gi|293339394|gb|GU595196.1|	89954	.	C	A	7182.80	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-1.021;DP=2697;Dels=0.00;FS=8.726;HRun=0;HaplotypeScore=3.2496;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-3.115;QD=41.76;ReadPosRankSum=-7.324;SB=-3090.28	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	1/1:0,36:36:99:1503,108,0	1/1:0,43:43:99:1796,129,0	1/1:0,31:31:93.31:1295,93,0	1/1:0,34:34:99:1420,102,0	0/0:179,0:179:99:0,539,7475	0/0:153,0:153:99:0,461,6389	0/0:195,0:195:99:0,587,8143	0/0:156,0:156:99:0,470,6515	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	1/1:0,28:28:84.28:1169,84,0	./.
gi|293339394|gb|GU595196.1|	89969	.	C	T	258.37	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.612;DP=2653;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.3809;InbreedingCoeff=0.9374;MQ=254.00;MQ0=0;MQRankSum=0.020;QD=32.30;ReadPosRankSum=-4.290;SB=-158.68	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:39,0:39:99:0,117,1629	0/0:48,0:48:99:0,144,2004	1/1:0,2:2:6.02:84,6,0	1/1:0,6:6:18.06:251,18,0	0/0:175,0:175:99:0,527,7308	0/0:156,0:156:99:0,470,6515	0/0:177,0:177:99:0,533,7392	0/0:164,0:164:99:0,494,6849	0/0:158,0:158:99:0,476,6598	0/0:150,0:150:99:0,452,6264	0/0:178,0:178:99:0,536,7433	0/0:153,0:153:99:0,461,6389	0/0:176,0:176:99:0,530,7350	0/0:160,0:160:99:0,482,6682	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:33,0:33:99:0,99,1378	0/0:50,0:50:99:0,151,2088
gi|293339394|gb|GU595196.1|	89971	.	C	T	7349.84	.	AC=12;AF=0.286;AN=42;BaseQRankSum=1.140;DP=2655;Dels=0.00;FS=1.569;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9834;MQ=254.00;MQ0=0;MQRankSum=-1.443;QD=41.76;ReadPosRankSum=-6.879;SB=-3631.01	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	1/1:0,38:38:99:1587,114,0	1/1:0,48:48:99:2004,144,0	1/1:0,3:3:9.03:125,9,0	1/1:0,5:5:15.05:209,15,0	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:157,0:157:99:0,473,6556	0/0:148,0:148:99:0,445,6181	0/0:179,0:179:99:0,539,7475	0/0:155,0:155:99:0,467,6473	0/0:172,0:172:99:0,518,7183	0/0:162,0:162:99:0,488,6765	0/0:154,0:154:99:0,464,6431	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	1/1:0,31:31:93.31:1295,93,0	1/1:0,51:51:99:2130,154,0
gi|293339394|gb|GU595196.1|	89990	.	T	C	17789.92	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.023;DP=2917;Dels=0.00;FS=8.476;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.018;QD=41.76;ReadPosRankSum=5.228;SB=-8059.76	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	1/1:0,84:84:99:3508,253,0	1/1:0,92:92:99:3842,277,0	1/1:0,36:36:99:1503,108,0	1/1:0,51:51:99:2130,154,0	0/0:183,0:183:99:0,551,7642	0/0:144,0:144:99:0,433,6013	0/0:170,0:170:99:0,512,7099	0/0:180,0:180:99:0,542,7517	0/0:156,0:156:99:0,470,6515	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	0/0:152,0:152:99:0,458,6348	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:157,0:157:99:0,473,6556	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	1/1:0,57:57:99:2380,172,0	1/1:0,106:106:99:4427,319,0
gi|293339394|gb|GU595196.1|	90022	.	G	A	27728.88	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.684;DP=3155;Dels=0.00;FS=6.549;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.837;QD=41.76;ReadPosRankSum=-2.492;SB=-13363.33	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:186,0:186:99:0,560,7767	1/1:0,115:115:99:4802,346,0	1/1:0,140:140:99:5846,421,0	1/1:0,78:78:99:3257,235,0	1/1:0,118:118:99:4928,355,0	0/0:177,0:177:99:0,533,7392	0/0:149,0:149:99:0,448,6222	0/0:174,0:174:99:0,524,7266	0/0:183,0:183:99:0,551,7642	0/0:140,0:140:99:0,421,5846	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	0/0:132,0:132:99:0,397,5512	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	1/1:0,63:63:99:2631,190,0	1/1:0,150:150:99:6264,452,0
gi|293339394|gb|GU595196.1|	90037	.	G	C	12820.44	.	AC=6;AF=0.143;AN=42;BaseQRankSum=2.031;DP=3173;Dels=0.00;FS=25.783;HRun=0;HaplotypeScore=5.8087;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.572;QD=41.76;ReadPosRankSum=1.818;SB=-5345.34	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:180,0:180:99:0,542,7517	1/1:0,105:105:99:4385,316,0	1/1:0,146:146:99:6097,439,0	0/0:80,0:80:99:0,241,3341	0/0:112,0:112:99:0,337,4677	0/0:178,0:178:99:0,536,7433	0/0:156,0:156:99:0,470,6515	0/0:170,0:170:99:0,512,7099	0/0:187,0:187:99:0,563,7809	0/0:150,0:150:99:0,452,6264	0/0:165,0:165:99:0,497,6890	0/0:180,0:180:99:0,542,7517	0/0:156,0:156:99:0,470,6515	0/0:149,0:149:99:0,448,6222	0/0:175,0:175:99:0,527,7308	0/0:128,0:128:99:0,385,5345	0/0:190,0:190:99:0,572,7934	0/0:179,0:179:99:0,539,7475	1/1:0,56:56:99:2339,169,0	0/0:144,0:144:99:0,433,6013
gi|293339394|gb|GU595196.1|	90046	.	G	A	5846.47	.	AC=2;AF=0.048;AN=42;BaseQRankSum=2.120;DP=3178;Dels=0.00;FS=20.255;HRun=0;HaplotypeScore=14.9504;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.626;QD=41.76;ReadPosRankSum=0.828;SB=-2296.84	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:175,0:175:99:0,527,7308	0/0:120,0:120:99:0,361,5011	0/0:154,0:154:99:0,464,6431	0/0:78,0:78:99:0,235,3257	0/0:110,0:110:99:0,331,4594	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:157,0:157:99:0,473,6556	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	0/0:156,0:156:99:0,470,6515	0/0:149,0:149:99:0,448,6222	0/0:173,0:173:99:0,521,7225	0/0:134,0:134:99:0,403,5596	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:55,0:55:99:0,166,2297	1/1:0,140:140:99:5846,421,0
gi|293339394|gb|GU595196.1|	90052	.	G	A	8226.80	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.942;DP=3182;Dels=0.00;FS=0.832;HRun=0;HaplotypeScore=5.9516;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.397;QD=41.76;ReadPosRankSum=-0.384;SB=-4050.77	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:174,0:174:99:0,524,7266	0/0:113,0:113:99:0,340,4719	0/0:159,0:159:99:0,479,6640	1/1:0,81:81:99:3383,244,0	1/1:0,116:116:99:4844,349,0	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:184,0:184:99:0,554,7684	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	0/0:146,0:146:99:0,439,6097	0/0:170,0:170:99:0,512,7099	0/0:146,0:146:99:0,439,6097	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:57,0:57:99:0,172,2380	0/0:136,0:136:99:0,409,5679
gi|293339394|gb|GU595196.1|	90076	.	G	A	11442.35	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.023;DP=3177;Dels=0.00;FS=57.220;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.459;QD=41.76;ReadPosRankSum=-0.419;SB=-4217.81	GT:AD:DP:GQ:PL	0/0:197,0:197:99:0,593,8227	0/0:177,0:177:99:0,533,7392	1/1:0,88:88:99:3675,265,0	1/1:0,130:130:99:5429,391,0	0/0:88,0:88:99:0,265,3675	0/0:98,0:98:99:0,295,4093	0/0:187,0:187:99:0,563,7809	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:192,0:192:99:0,578,8018	0/0:188,0:188:99:0,566,7851	0/0:187,0:187:99:0,563,7809	0/0:207,0:207:99:0,623,8644	0/0:169,0:169:99:0,509,7057	0/0:136,0:136:99:0,409,5679	0/0:146,0:146:99:0,439,6097	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:150,0:150:99:0,452,6264	1/1:0,56:56:99:2339,169,0	0/0:119,0:119:99:0,358,4969
gi|293339394|gb|GU595196.1|	90103	.	C	G	5888.23	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.280;DP=2979;Dels=0.00;FS=52.157;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.082;QD=41.76;ReadPosRankSum=2.410;SB=-1920.99	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:169,0:169:99:0,509,7057	1/1:0,38:38:99:1587,114,0	1/1:0,62:62:99:2589,187,0	0/0:61,0:61:99:0,184,2547	0/0:73,0:73:99:0,220,3049	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:152,0:152:99:0,458,6348	0/0:191,0:191:99:0,575,7976	0/0:198,0:198:99:0,596,8269	0/0:171,0:171:99:0,515,7141	0/0:213,0:213:99:0,641,8895	0/0:163,0:163:99:0,491,6807	0/0:157,0:157:99:0,473,6556	0/0:160,0:160:99:0,482,6682	0/0:158,0:158:99:0,476,6598	0/0:157,0:157:99:0,473,6556	0/0:165,0:165:99:0,497,6890	1/1:0,41:41:99:1712,123,0	0/0:130,0:130:99:0,391,5429
gi|293339394|gb|GU595196.1|	90124	.	A	G	1440.24	.	AC=6;AF=0.143;AN=42;BaseQRankSum=2.340;DP=2834;Dels=0.00;FS=8.592;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9998;MQ=254.00;MQ0=0;MQRankSum=0.557;QD=38.93;ReadPosRankSum=-5.742;SB=-582.74	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:162,0:162:99:0,488,6765	1/1:0,11:11:33.11:459,33,0	1/1:0,15:15:45.15:626,45,0	0/0:63,0:63:99:0,190,2631	0/0:65,0:65:99:0,196,2714	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:155,0:155:99:0,467,6473	0/0:178,0:178:99:0,536,7433	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:187,0:187:99:0,563,7809	0/0:178,0:178:99:0,536,7433	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	1/1:0,11:11:33.11:459,33,0	0/0:122,0:122:99:0,367,5095
gi|293339394|gb|GU595196.1|	90133	.	A	C	1608.12	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.351;DP=2823;Dels=0.00;FS=0.572;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9970;MQ=254.00;MQ0=0;MQRankSum=0.587;QD=39.22;ReadPosRankSum=-6.837;SB=-828.32	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:166,0:166:99:0,500,6932	1/1:0,15:15:45.15:626,45,0	1/1:0,20:20:60.20:835,60,0	0/0:67,0:67:99:0,202,2798	0/0:74,0:74:99:0,223,3090	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	0/0:150,0:150:99:0,452,6264	0/0:181,0:181:99:0,545,7559	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:180,0:180:99:0,542,7517	0/0:162,0:162:99:0,488,6765	0/0:184,0:184:99:0,554,7684	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:175,0:175:99:0,527,7308	1/1:0,6:6:18.06:251,18,0	0/0:120,0:120:99:0,361,5011
gi|293339394|gb|GU595196.1|	90148	.	C	T	5303.58	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.517;DP=2978;Dels=0.00;FS=2.316;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.216;QD=41.76;ReadPosRankSum=-1.164;SB=-2547.34	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:173,0:173:99:0,521,7225	1/1:0,51:51:99:2130,154,0	1/1:0,52:52:99:2172,157,0	0/0:75,0:75:99:0,226,3132	0/0:78,0:78:99:0,235,3257	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:156,0:156:99:0,470,6515	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	0/0:191,0:191:99:0,575,7976	0/0:162,0:162:99:0,488,6765	0/0:179,0:179:99:0,539,7475	0/0:153,0:153:99:0,461,6389	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:152,0:152:99:0,458,6348	0/0:175,0:175:99:0,527,7308	1/1:0,24:24:72.24:1002,72,0	0/0:133,0:133:99:0,400,5554
gi|293339394|gb|GU595196.1|	90244	.	C	T	13154.52	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.109;DP=3188;Dels=0.00;FS=3.914;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.294;QD=41.76;ReadPosRankSum=1.081;SB=-6305.83	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:184,0:184:99:0,554,7684	1/1:0,108:108:99:4510,325,0	1/1:0,142:142:99:5930,427,0	0/0:74,0:74:99:0,223,3090	0/0:94,0:94:99:0,283,3925	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:191,0:191:99:0,575,7976	0/0:155,0:155:99:0,467,6473	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:151,0:151:99:0,455,6306	0/0:186,0:186:99:0,560,7767	0/0:180,0:180:99:0,542,7517	0/0:148,0:148:99:0,445,6181	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	1/1:0,65:65:99:2714,196,0	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	90283	.	C	G	16787.67	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-1.288;DP=2956;Dels=0.00;FS=7.873;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.545;QD=41.76;ReadPosRankSum=1.122;SB=-7976.24	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:192,0:192:99:0,578,8018	1/1:0,39:39:99:1629,117,0	1/1:0,60:60:99:2506,181,0	1/1:0,79:79:99:3299,238,0	1/1:0,60:60:99:2506,181,0	0/0:163,0:163:99:0,491,6807	0/0:147,0:147:99:0,442,6139	0/0:171,0:171:99:0,515,7141	0/0:195,0:195:99:0,587,8143	0/0:144,0:144:99:0,433,6013	0/0:165,0:165:99:0,497,6890	0/0:175,0:175:99:0,527,7308	0/0:190,0:190:99:0,572,7934	0/0:148,0:148:99:0,445,6181	0/0:156,0:156:99:0,470,6515	0/0:163,0:163:99:0,491,6807	0/0:205,0:205:99:0,617,8561	0/0:157,0:157:99:0,473,6556	1/1:0,32:32:96.32:1336,96,0	1/1:0,132:132:99:5512,397,0
gi|293339394|gb|GU595196.1|	90296	.	C	G	1691.21	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.294;DP=2869;Dels=0.00;FS=1.197;HRun=0;HaplotypeScore=2.0473;InbreedingCoeff=0.9985;MQ=254.00;MQ0=0;MQRankSum=-0.182;QD=39.33;ReadPosRankSum=-7.646;SB=-828.87	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:193,0:193:99:0,581,8060	1/1:0,7:7:21.07:292,21,0	1/1:0,22:22:66.22:919,66,0	0/0:51,0:51:99:0,154,2130	0/0:34,0:34:99:0,102,1420	0/0:175,0:175:99:0,527,7308	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	0/0:190,0:190:99:0,572,7934	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:190,0:190:99:0,572,7934	0/0:197,0:197:99:0,593,8227	0/0:154,0:154:99:0,464,6431	0/0:158,0:158:99:0,476,6598	0/0:188,0:188:99:0,566,7851	0/0:203,0:203:99:0,611,8477	0/0:154,0:154:99:0,464,6431	1/1:0,14:14:42.14:585,42,0	0/0:101,0:101:99:0,304,4218
gi|293339394|gb|GU595196.1|	90304	.	T	A	5094.78	.	AC=6;AF=0.167;AN=36;BaseQRankSum=0.390;DP=2735;Dels=0.00;FS=0.332;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.390;QD=41.76;ReadPosRankSum=-4.906;SB=-2547.19	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:178,0:178:99:0,536,7433	./.	./.	1/1:0,34:34:99:1420,102,0	1/1:0,20:20:60.20:835,60,0	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:188,0:188:99:0,566,7851	0/0:162,0:162:99:0,488,6765	0/0:161,0:161:99:0,485,6723	0/0:200,0:200:99:0,602,8352	0/0:204,0:204:99:0,614,8519	0/0:156,0:156:99:0,470,6515	0/0:165,0:165:99:0,497,6890	0/0:187,0:187:99:0,563,7809	0/0:184,0:184:99:0,554,7684	0/0:157,0:157:99:0,473,6556	./.	1/1:0,68:68:99:2840,205,0
gi|293339394|gb|GU595196.1|	90317	.	G	A	870.57	.	AC=6;AF=0.167;AN=36;BaseQRankSum=-0.670;DP=2640;Dels=0.00;FS=3.939;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9350;MQ=254.00;MQ0=0;MQRankSum=0.443;QD=37.85;ReadPosRankSum=3.233;SB=-371.10	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:188,0:188:99:0,566,7851	./.	./.	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:163,0:163:99:0,491,6807	0/0:189,0:189:99:0,569,7893	0/0:168,0:168:99:0,506,7016	0/0:156,0:156:99:0,470,6515	0/0:207,0:207:99:0,623,8644	0/0:182,0:182:99:0,548,7600	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	0/0:185,0:185:99:0,557,7726	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	./.	1/1:0,18:18:54.18:752,54,0
gi|293339394|gb|GU595196.1|	90336	.	T	C	11651.15	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.169;DP=2923;Dels=0.00;FS=12.936;HRun=1;HaplotypeScore=5.2850;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.869;QD=41.76;ReadPosRankSum=-6.703;SB=-5220.04	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:183,0:183:99:0,551,7642	1/1:0,39:39:99:1629,117,0	1/1:0,50:50:99:2088,151,0	1/1:0,28:28:84.28:1169,84,0	1/1:0,45:45:99:1879,135,0	0/0:178,0:178:99:0,536,7433	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:199,0:199:99:0,599,8310	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:189,0:189:99:0,569,7893	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	0/0:179,0:179:99:0,539,7475	0/0:189,0:189:99:0,569,7893	0/0:163,0:163:99:0,491,6807	0/0:194,0:194:99:0,584,8102	1/1:0,22:22:66.22:919,66,0	1/1:0,95:95:99:3967,286,0
gi|293339394|gb|GU595196.1|	90340	.	C	G,T	14073.25	.	AC=6,6;AF=0.143,0.143;AN=42;BaseQRankSum=-0.757;DP=2974;Dels=0.00;FS=11.980;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.176;QD=41.76;ReadPosRankSum=-2.720;SB=-5741.98	GT:AD:DP:GQ:PL	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:179,0,0:179:99:0,539,7475,539,7475,7475	2/2:0,0,50:50:99:2088,2088,2088,151,151,0	2/2:0,0,67:67:99:2798,2798,2798,202,202,0	1/1:0,33,0:33:99:1378,99,0,1378,99,1378	1/1:0,49,0:49:99:2046,147,0,2046,147,2046	0/0:185,0,0:185:99:0,557,7726,557,7726,7726	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:201,0,0:201:99:0,605,8394,605,8394,8394	0/0:169,0,0:169:99:0,509,7057,509,7057,7057	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	0/0:185,0,0:185:99:0,557,7726,557,7726,7726	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	0/0:176,0,0:176:99:0,530,7350,530,7350,7350	0/0:182,0,0:182:99:0,548,7600,548,7600,7600	0/0:156,0,0:156:99:0,470,6515,470,6515,6515	0/0:201,0,0:201:99:0,605,8394,605,8394,8394	2/2:0,0,31:31:93.31:1295,1295,1295,93,93,0	1/1:0,107,0:107:99:4468,322,0,4468,322,4468
gi|293339394|gb|GU595196.1|	90441	.	G	A	15409.58	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.097;DP=3198;Dels=0.00;FS=11.166;HRun=0;HaplotypeScore=11.0461;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.771;QD=41.76;ReadPosRankSum=-1.743;SB=-6765.19	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:177,0:177:99:0,533,7392	0/0:103,0:103:99:0,310,4301	0/0:145,0:145:99:0,436,6055	1/1:0,84:84:99:3508,253,0	1/1:0,96:96:99:4009,289,0	0/0:180,0:180:99:0,542,7517	0/0:160,0:160:99:0,482,6682	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	0/0:160,0:160:99:0,482,6682	0/0:144,0:144:99:0,433,6013	0/0:143,0:143:99:0,430,5972	0/0:175,0:175:99:0,527,7308	0/0:181,0:181:99:0,545,7559	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:66,0:66:99:0,199,2756	1/1:0,189:189:99:7893,569,0
gi|293339394|gb|GU595196.1|	90450	.	T	C	27603.60	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.056;DP=3190;Dels=0.00;FS=24.072;HRun=1;HaplotypeScore=11.0461;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.727;QD=41.76;ReadPosRankSum=-0.486;SB=-12068.76	GT:AD:DP:GQ:PL	0/0:194,0:194:99:0,584,8102	0/0:170,0:170:99:0,512,7099	1/1:0,93:93:99:3884,280,0	1/1:0,134:134:99:5596,403,0	1/1:0,81:81:99:3383,244,0	1/1:0,96:96:99:4009,289,0	0/0:172,0:172:99:0,518,7183	0/0:156,0:156:99:0,470,6515	0/0:158,0:158:99:0,476,6598	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:142,0:142:99:0,427,5930	0/0:159,0:159:99:0,479,6640	0/0:179,0:179:99:0,539,7475	0/0:177,0:177:99:0,533,7392	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	1/1:0,64:64:99:2673,193,0	1/1:0,193:193:99:8060,581,0
gi|293339394|gb|GU595196.1|	90464	.	A	G	11901.71	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.212;DP=3155;Dels=0.00;FS=37.289;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.883;QD=41.76;ReadPosRankSum=0.383;SB=-4593.66	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:170,0:170:99:0,512,7099	1/1:0,91:91:99:3800,274,0	1/1:0,131:131:99:5471,394,0	0/0:83,0:83:99:0,250,3466	0/0:93,0:93:99:0,280,3884	0/0:178,0:178:99:0,536,7433	0/0:161,0:161:99:0,485,6723	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:152,0:152:99:0,458,6348	0/0:155,0:155:99:0,467,6473	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:155,0:155:99:0,467,6473	0/0:180,0:180:99:0,542,7517	0/0:153,0:153:99:0,461,6389	0/0:183,0:183:99:0,551,7642	1/1:0,63:63:99:2631,190,0	0/0:181,0:181:99:0,545,7559
gi|293339394|gb|GU595196.1|	90513	.	T	C	13363.33	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.302;DP=3205;Dels=0.00;FS=39.157;HRun=2;HaplotypeScore=11.6175;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.181;QD=41.76;ReadPosRankSum=-0.200;SB=-5011.26	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:164,0:164:99:0,494,6849	0/0:90,0:90:99:0,271,3758	0/0:130,0:130:99:0,391,5429	1/1:0,73:73:99:3049,220,0	1/1:0,64:64:99:2673,193,0	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:174,0:174:99:0,524,7266	0/0:152,0:152:99:0,458,6348	0/0:180,0:180:99:0,542,7517	0/0:162,0:162:99:0,488,6765	0/0:180,0:180:99:0,542,7517	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:189,0:189:99:0,569,7893	0/0:175,0:175:99:0,527,7308	0/0:194,0:194:99:0,584,8102	0/0:61,0:61:99:0,184,2547	1/1:0,183:183:99:7642,551,0
gi|293339394|gb|GU595196.1|	90519	.	A	G	11567.63	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.658;DP=3221;Dels=0.00;FS=66.832;HRun=0;HaplotypeScore=23.5683;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.161;QD=41.76;ReadPosRankSum=-1.737;SB=-3758.45	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:172,0:172:99:0,518,7183	1/1:0,86:86:99:3591,259,0	1/1:0,133:133:99:5554,400,0	0/0:67,0:67:99:0,202,2798	0/0:65,0:65:99:0,196,2714	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:150,0:150:99:0,452,6264	0/0:186,0:186:99:0,560,7767	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:187,0:187:99:0,563,7809	0/0:178,0:178:99:0,536,7433	0/0:183,0:183:99:0,551,7642	1/1:0,58:58:99:2422,175,0	0/0:178,0:178:99:0,536,7433
gi|293339394|gb|GU595196.1|	90528	.	G	A	11317.07	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.543;DP=3200;Dels=0.00;FS=49.792;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.526;QD=41.76;ReadPosRankSum=0.223;SB=-3925.49	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:168,0:168:99:0,506,7016	1/1:0,84:84:99:3508,253,0	1/1:0,122:122:99:5095,367,0	0/0:63,0:63:99:0,190,2631	0/0:70,0:70:99:0,211,2923	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	0/0:182,0:182:99:0,548,7600	0/0:187,0:187:99:0,563,7809	0/0:188,0:188:99:0,566,7851	1/1:0,65:65:99:2714,196,0	0/0:172,0:172:99:0,518,7183
gi|293339394|gb|GU595196.1|	90582	.	C	A	15284.30	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.612;DP=3243;Dels=0.00;FS=15.801;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.218;QD=41.76;ReadPosRankSum=1.238;SB=-6639.91	GT:AD:DP:GQ:PL	0/0:145,0:145:99:0,436,6055	0/0:160,0:160:99:0,482,6682	1/1:0,122:122:99:5095,367,0	1/1:0,166:166:99:6932,500,0	0/0:84,0:84:99:0,253,3508	0/0:104,0:104:99:0,313,4343	0/0:187,0:187:99:0,563,7809	0/0:149,0:149:99:0,448,6222	0/0:157,0:157:99:0,473,6556	0/0:205,0:205:99:0,617,8561	0/0:147,0:147:99:0,442,6139	0/0:155,0:155:99:0,467,6473	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:151,0:151:99:0,455,6306	0/0:147,0:147:99:0,442,6139	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:189,0:189:99:0,569,7893	1/1:0,78:78:99:3257,235,0	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	90636	.	T	A	13906.21	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.923;DP=3260;Dels=0.00;FS=4.136;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.015;QD=41.76;ReadPosRankSum=-0.872;SB=-6598.15	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	1/1:0,99:99:99:4134,298,0	1/1:0,160:160:99:6682,482,0	0/0:77,0:77:99:0,232,3216	0/0:98,0:98:99:0,295,4093	0/0:193,0:193:99:0,581,8060	0/0:169,0:169:99:0,509,7057	0/0:151,0:151:99:0,455,6306	0/0:189,0:189:99:0,569,7893	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:148,0:148:99:0,445,6181	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:188,0:188:99:0,566,7851	1/1:0,74:74:99:3090,223,0	0/0:202,0:202:99:0,608,8436
gi|293339394|gb|GU595196.1|	90693	.	A	T	11024.75	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.551;DP=3160;Dels=0.00;FS=38.716;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.507;QD=41.76;ReadPosRankSum=-0.042;SB=-3841.97	GT:AD:DP:GQ:PL	0/0:194,0:194:99:0,584,8102	0/0:176,0:176:99:0,530,7350	1/1:0,88:88:99:3675,265,0	1/1:0,106:106:99:4427,319,0	0/0:68,0:68:99:0,205,2840	0/0:88,0:88:99:0,265,3675	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	0/0:153,0:153:99:0,461,6389	0/0:183,0:183:99:0,551,7642	0/0:178,0:178:99:0,536,7433	0/0:188,0:188:99:0,566,7851	0/0:185,0:185:99:0,557,7726	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:133,0:133:99:0,400,5554	0/0:156,0:156:99:0,470,6515	1/1:0,70:70:99:2923,211,0	0/0:188,0:188:99:0,566,7851
gi|293339394|gb|GU595196.1|	90828	.	T	C	12444.60	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.683;DP=3009;Dels=0.00;FS=45.500;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.210;QD=41.76;ReadPosRankSum=-0.122;SB=-4134.29	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:65,0:65:99:0,196,2714	0/0:89,0:89:99:0,268,3717	1/1:0,41:41:99:1712,123,0	1/1:0,64:64:99:2673,193,0	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	0/0:152,0:152:99:0,458,6348	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:48,0:48:99:0,144,2004	1/1:0,193:193:99:8060,581,0
gi|293339394|gb|GU595196.1|	90885	.	C	A	2126.81	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.442;DP=2868;Dels=0.00;FS=142.611;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.933;QD=40.13;ReadPosRankSum=-2.006;SB=-0.02	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:192,0:192:99:0,578,8018	0/0:28,0:28:84.28:0,84,1169	0/0:51,0:51:99:0,154,2130	1/1:0,20:20:60.20:835,60,0	1/1:0,33:33:99:1378,99,0	0/0:203,0:203:99:0,611,8477	0/0:177,0:177:99:0,533,7392	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:152,0:152:99:0,458,6348	0/0:160,0:160:99:0,482,6682	0/0:186,0:186:99:0,560,7767	0/0:153,0:153:99:0,461,6389	0/0:177,0:177:99:0,533,7392	0/0:153,0:153:99:0,461,6389	0/0:19,0:19:57.19:0,57,793	0/0:147,0:147:99:0,442,6139
gi|293339394|gb|GU595196.1|	90897	.	G	C	874.22	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.488;DP=2816;Dels=0.00;FS=59.643;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9993;MQ=254.00;MQ0=0;MQRankSum=0.808;QD=38.01;ReadPosRankSum=-4.382;SB=-0.02	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:187,0:187:99:0,563,7809	0/0:15,0:15:45.15:0,45,626	0/0:36,0:36:99:0,108,1503	1/1:0,9:9:27.09:376,27,0	1/1:0,14:14:42.14:585,42,0	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:178,0:178:99:0,536,7433	0/0:181,0:181:99:0,545,7559	0/0:180,0:180:99:0,542,7517	0/0:158,0:158:99:0,476,6598	0/0:154,0:154:99:0,464,6431	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:178,0:178:99:0,536,7433	0/0:155,0:155:99:0,467,6473	0/0:11,0:11:33.11:0,33,459	0/0:143,0:143:99:0,430,5972
gi|293339394|gb|GU595196.1|	90910	.	G	A	421.64	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.066;DP=2698;Dels=0.00;FS=33.039;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9821;MQ=254.00;MQ0=0;MQRankSum=-0.120;QD=35.14;ReadPosRankSum=-5.608;SB=-0.02	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:186,0:186:99:0,560,7767	1/1:0,4:4:12.04:167,12,0	1/1:0,8:8:24.08:334,24,0	./.	./.	0/0:173,0:173:99:0,521,7225	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:141,0:141:99:0,424,5888	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	0/0:169,0:169:99:0,509,7057	0/0:152,0:152:99:0,458,6348	./.	0/0:137,0:137:99:0,412,5721
gi|293339394|gb|GU595196.1|	90911	.	T	C	101.03	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-1.354;DP=2672;Dels=0.00;FS=9.026;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8765;MQ=254.00;MQ0=0;MQRankSum=-0.866;QD=25.26;ReadPosRankSum=-3.384;SB=-0.02	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:183,0:183:99:0,551,7642	1/1:0,2:2:6.02:84,6,0	1/1:0,2:2:6.02:84,6,0	./.	./.	0/0:171,0:171:99:0,515,7141	0/0:185,0:185:99:0,557,7726	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:174,0:174:99:0,524,7266	0/0:176,0:176:99:0,530,7350	0/0:167,0:167:99:0,503,6974	0/0:139,0:139:99:0,418,5805	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:150,0:150:99:0,452,6264	./.	0/0:137,0:137:99:0,412,5721
gi|293339394|gb|GU595196.1|	90980	.	C	T	6097.03	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.857;DP=2728;Dels=0.00;FS=44.073;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.382;QD=41.76;ReadPosRankSum=0.283;SB=-1962.75	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	./.	./.	./.	./.	0/0:148,0:148:99:0,445,6181	0/0:163,0:163:99:0,491,6807	0/0:183,0:183:99:0,551,7642	0/0:174,0:174:99:0,524,7266	0/0:156,0:156:99:0,470,6515	0/0:194,0:194:99:0,584,8102	0/0:175,0:175:99:0,527,7308	0/0:191,0:191:99:0,575,7976	0/0:183,0:183:99:0,551,7642	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	./.	1/1:0,146:146:99:6097,439,0
gi|293339394|gb|GU595196.1|	90987	.	G	A	6264.07	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.971;DP=2707;Dels=0.00;FS=41.351;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.422;QD=41.76;ReadPosRankSum=-0.251;SB=-2088.04	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:180,0:180:99:0,542,7517	./.	./.	./.	./.	0/0:158,0:158:99:0,476,6598	0/0:151,0:151:99:0,455,6306	0/0:182,0:182:99:0,548,7600	0/0:168,0:168:99:0,506,7016	0/0:153,0:153:99:0,461,6389	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:199,0:199:99:0,599,8310	0/0:164,0:164:99:0,494,6849	0/0:156,0:156:99:0,470,6515	0/0:172,0:172:99:0,518,7183	0/0:182,0:182:99:0,548,7600	0/0:161,0:161:99:0,485,6723	./.	1/1:0,150:150:99:6264,452,0
gi|293339394|gb|GU595196.1|	91070	.	A	G	5011.26	.	AC=2;AF=0.063;AN=32;BaseQRankSum=0.228;DP=2635;Dels=0.00;FS=34.402;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.125;QD=41.76;ReadPosRankSum=4.461;SB=-1712.19	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	./.	./.	./.	./.	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:157,0:157:99:0,473,6556	0/0:151,0:151:99:0,455,6306	0/0:147,0:147:99:0,442,6139	0/0:181,0:181:99:0,545,7559	0/0:164,0:164:99:0,494,6849	0/0:192,0:192:99:0,578,8018	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:147,0:147:99:0,442,6139	0/0:184,0:184:99:0,554,7684	0/0:167,0:167:99:0,503,6974	./.	1/1:0,120:120:99:5011,361,0
gi|293339394|gb|GU595196.1|	91084	.	G	A	3072.08	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.343;DP=2560;Dels=0.00;FS=34.123;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.790;QD=40.96;ReadPosRankSum=-4.950;SB=-918.75	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	./.	./.	./.	./.	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:145,0:145:99:0,436,6055	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	0/0:150,0:150:99:0,452,6264	./.	1/1:0,75:75:99:3132,226,0
gi|293339394|gb|GU595196.1|	91145	.	G	T	193.56	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.191;DP=2581;Dels=0.00;FS=1.629;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9917;MQ=254.00;MQ0=0;MQRankSum=-0.393;QD=32.26;ReadPosRankSum=-4.115;SB=-79.60	GT:AD:DP:GQ:PL	0/0:190,0:190:99:0,572,7934	0/0:189,0:189:99:0,569,7893	./.	./.	./.	./.	0/0:168,0:168:99:0,506,7016	0/0:154,0:154:99:0,464,6431	0/0:203,0:203:99:0,611,8477	0/0:168,0:168:99:0,506,7016	0/0:145,0:145:99:0,436,6055	0/0:180,0:180:99:0,542,7517	0/0:163,0:163:99:0,491,6807	0/0:197,0:197:99:0,593,8227	0/0:166,0:166:99:0,500,6932	0/0:155,0:155:99:0,467,6473	0/0:182,0:182:99:0,548,7600	0/0:155,0:155:99:0,467,6473	0/0:160,0:160:99:0,482,6682	./.	1/1:0,6:6:18.06:251,18,0
gi|293339394|gb|GU595196.1|	91146	.	T	C	316.39	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.350;DP=2584;Dels=0.00;FS=2.948;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9990;MQ=254.00;MQ0=0;MQRankSum=0.168;QD=35.15;ReadPosRankSum=-4.740;SB=-122.85	GT:AD:DP:GQ:PL	0/0:191,0:191:99:0,575,7976	0/0:187,0:187:99:0,563,7809	./.	./.	./.	./.	0/0:164,0:164:99:0,494,6849	0/0:157,0:157:99:0,473,6556	0/0:202,0:202:99:0,608,8436	0/0:165,0:165:99:0,497,6890	0/0:146,0:146:99:0,439,6097	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:194,0:194:99:0,584,8102	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	0/0:182,0:182:99:0,548,7600	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	./.	1/1:0,9:9:27.09:376,27,0
gi|293339394|gb|GU595196.1|	91223	.	T	G	4593.66	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-1.072;DP=2691;Dels=0.00;FS=3.602;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.566;QD=41.76;ReadPosRankSum=2.215;SB=-2088.04	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:164,0:164:99:0,494,6849	./.	./.	./.	./.	0/0:194,0:194:99:0,584,8102	0/0:155,0:155:99:0,467,6473	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:149,0:149:99:0,448,6222	0/0:185,0:185:99:0,557,7726	0/0:157,0:157:99:0,473,6556	0/0:190,0:190:99:0,572,7934	0/0:172,0:172:99:0,518,7183	0/0:183,0:183:99:0,551,7642	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	./.	1/1:0,110:110:99:4594,331,0
gi|293339394|gb|GU595196.1|	91235	.	G	A	2821.52	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.898;DP=2713;Dels=0.00;FS=4.049;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.546;QD=40.89;ReadPosRankSum=-5.244;SB=-1252.83	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:170,0:170:99:0,512,7099	./.	./.	./.	./.	0/0:190,0:190:99:0,572,7934	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	0/0:199,0:199:99:0,599,8310	0/0:165,0:165:99:0,497,6890	0/0:182,0:182:99:0,548,7600	0/0:182,0:182:99:0,548,7600	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	./.	1/1:0,69:69:99:2881,208,0
gi|293339394|gb|GU595196.1|	91265	.	G	T	1318.14	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.572;DP=2571;Dels=0.00;FS=12.721;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.232;QD=39.94;ReadPosRankSum=-4.395;SB=-459.38	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:159,0:159:99:0,479,6640	./.	./.	./.	./.	0/0:181,0:181:99:0,545,7559	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:165,0:165:99:0,497,6890	0/0:156,0:156:99:0,470,6515	0/0:193,0:193:99:0,581,8060	0/0:180,0:180:99:0,542,7517	0/0:169,0:169:99:0,509,7057	0/0:184,0:184:99:0,554,7684	0/0:174,0:174:99:0,524,7266	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	./.	1/1:0,33:33:99:1378,99,0
gi|293339394|gb|GU595196.1|	91336	.	T	A	4593.66	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.602;DP=2608;Dels=0.00;FS=92.392;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.240;QD=41.76;ReadPosRankSum=1.380;SB=-1002.27	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	./.	./.	./.	./.	0/0:176,0:176:99:0,530,7350	0/0:157,0:157:99:0,473,6556	0/0:153,0:153:99:0,461,6389	0/0:174,0:174:99:0,524,7266	0/0:146,0:146:99:0,439,6097	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:194,0:194:99:0,584,8102	0/0:154,0:154:99:0,464,6431	0/0:175,0:175:99:0,527,7308	0/0:188,0:188:99:0,566,7851	0/0:139,0:139:99:0,418,5805	0/0:143,0:143:99:0,430,5972	./.	1/1:0,110:110:99:4594,331,0
gi|293339394|gb|GU595196.1|	91441	.	C	T	289.21	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.635;DP=2765;Dels=0.00;FS=24.012;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9095;MQ=254.00;MQ0=0;MQRankSum=-0.453;QD=32.13;ReadPosRankSum=-4.559;SB=-0.02	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:181,0:181:99:0,545,7559	1/1:0,2:2:6.02:84,6,0	1/1:0,5:5:15.05:209,15,0	./.	./.	0/0:188,0:188:99:0,566,7851	0/0:164,0:164:99:0,494,6849	0/0:191,0:191:99:0,575,7976	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:196,0:196:99:0,590,8185	0/0:148,0:148:99:0,445,6181	0/0:166,0:166:99:0,500,6932	0/0:157,0:157:99:0,473,6556	0/0:184,0:184:99:0,554,7684	0/0:189,0:189:99:0,569,7893	0/0:175,0:175:99:0,527,7308	0/0:142,0:142:99:0,427,5930	1/1:0,2:2:6.02:84,6,0	0/0:159,0:159:99:0,479,6640
gi|293339394|gb|GU595196.1|	91444	.	C	T	737.83	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.872;DP=2803;Dels=0.00;FS=56.831;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9759;MQ=254.00;MQ0=0;MQRankSum=-0.319;QD=36.89;ReadPosRankSum=-5.796;SB=-0.02	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:189,0:189:99:0,569,7893	1/1:0,7:7:21.07:292,21,0	1/1:0,10:10:30.10:418,30,0	./.	./.	0/0:190,0:190:99:0,572,7934	0/0:170,0:170:99:0,512,7099	0/0:194,0:194:99:0,584,8102	0/0:155,0:155:99:0,467,6473	0/0:172,0:172:99:0,518,7183	0/0:193,0:193:99:0,581,8060	0/0:152,0:152:99:0,458,6348	0/0:152,0:152:99:0,458,6348	0/0:161,0:161:99:0,485,6723	0/0:196,0:196:99:0,590,8185	0/0:191,0:191:99:0,575,7976	0/0:174,0:174:99:0,524,7266	0/0:146,0:146:99:0,439,6097	1/1:0,3:3:9.03:125,9,0	0/0:160,0:160:99:0,482,6682
gi|293339394|gb|GU595196.1|	91486	.	A	G	34.73	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-1.049;DP=2819;Dels=0.00;FS=2.996;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8836;MQ=254.00;MQ0=0;MQRankSum=-0.906;QD=17.36;ReadPosRankSum=-2.290;SB=-0.02	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:56,0:56:99:0,169,2339	0/0:84,0:84:99:0,253,3508	./.	1/1:0,2:2:6.02:84,6,0	0/0:182,0:182:99:0,548,7600	0/0:181,0:181:99:0,545,7559	0/0:170,0:170:99:0,512,7099	0/0:152,0:152:99:0,458,6348	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:163,0:163:99:0,491,6807	0/0:152,0:152:99:0,458,6348	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:145,0:145:99:0,436,6055	0/0:152,0:152:99:0,458,6348	0/0:38,0:38:99:0,114,1587	0/0:144,0:144:99:0,433,6013
gi|293339394|gb|GU595196.1|	91489	.	A	G	179	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.670;DP=2800;Dels=0.00;FS=14.788;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8905;MQ=254.00;MQ0=0;MQRankSum=1.344;QD=29.83;ReadPosRankSum=-3.416;SB=-0.02	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:164,0:164:99:0,494,6849	0/0:58,0:58:99:0,175,2422	0/0:88,0:88:99:0,265,3675	1/1:0,1:1:3.01:42,3,0	1/1:0,5:5:15.05:209,15,0	0/0:181,0:181:99:0,545,7559	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:155,0:155:99:0,467,6473	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:160,0:160:99:0,482,6682	0/0:144,0:144:99:0,433,6013	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:141,0:141:99:0,424,5888	0/0:154,0:154:99:0,464,6431	0/0:38,0:38:99:0,114,1587	0/0:140,0:140:99:0,421,5846
gi|293339394|gb|GU595196.1|	91522	.	G	A	5512.38	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.383;DP=2759;Dels=0.00;FS=386.257;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.269;QD=41.76;ReadPosRankSum=0.861;SB=-0.02	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:158,0:158:99:0,476,6598	1/1:0,47:47:99:1963,141,0	1/1:0,61:61:99:2547,184,0	0/0:14,0:14:42.14:0,42,585	0/0:31,0:31:93.31:0,93,1295	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:154,0:154:99:0,464,6431	0/0:146,0:146:99:0,439,6097	0/0:147,0:147:99:0,442,6139	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:186,0:186:99:0,560,7767	0/0:161,0:161:99:0,485,6723	0/0:147,0:147:99:0,442,6139	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:155,0:155:99:0,467,6473	1/1:0,24:24:72.24:1002,72,0	0/0:136,0:136:99:0,409,5679
gi|293339394|gb|GU595196.1|	91577	.	C	A	10982.99	.	AC=12;AF=0.286;AN=42;BaseQRankSum=1.047;DP=2803;Dels=0.00;FS=122.645;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.289;QD=41.76;ReadPosRankSum=0.169;SB=-3006.76	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	1/1:0,46:46:99:1921,138,0	1/1:0,60:60:99:2506,181,0	1/1:0,13:13:39.13:543,39,0	1/1:0,33:33:99:1378,99,0	0/0:175,0:175:99:0,527,7308	0/0:160,0:160:99:0,482,6682	0/0:184,0:184:99:0,554,7684	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:200,0:200:99:0,602,8352	0/0:164,0:164:99:0,494,6849	0/0:177,0:177:99:0,533,7392	0/0:158,0:158:99:0,476,6598	0/0:161,0:161:99:0,485,6723	0/0:162,0:162:99:0,488,6765	1/1:0,25:25:75.25:1044,75,0	1/1:0,86:86:99:3591,259,0
gi|293339394|gb|GU595196.1|	91588	.	T	A,C	5637.66	.	AC=4,2;AF=0.095,0.048;AN=42;BaseQRankSum=0.220;DP=2859;Dels=0.00;FS=127.761;HaplotypeScore=0.0000;InbreedingCoeff=0.9990;MQ=254.00;MQ0=0;MQRankSum=1.617;QD=41.76;ReadPosRankSum=-1.718;SB=-2672.68	GT:AD:DP:GQ:PL	0/0:164,0,0:164:99:0,494,6849,494,6849,6849	0/0:158,0,0:158:99:0,476,6598,476,6598,6598	0/0:44,0,0:44:99:0,132,1837,132,1837,1837	0/0:55,0,0:55:99:0,166,2297,166,2297,2297	1/1:0,8,0:8:24.08:334,24,0,334,24,334	1/1:0,36,0:36:99:1503,108,0,1503,108,1503	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	0/0:179,0,0:179:99:0,539,7475,539,7475,7475	0/0:180,0,0:180:99:0,542,7517,542,7517,7517	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	0/0:208,0,0:208:99:0,626,8686,626,8686,8686	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:181,0,0:181:99:0,545,7559,545,7559,7559	0/0:156,0,0:156:99:0,470,6515,470,6515,6515	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:27,0,0:27:81.27:0,81,1128,81,1128,1128	2/2:0,0,91:91:99:3800,3800,3800,274,274,0
gi|293339394|gb|GU595196.1|	91615	.	A	G	14490.85	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.714;DP=2848;Dels=0.00;FS=90.067;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.324;QD=41.76;ReadPosRankSum=1.355;SB=-5011.26	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	1/1:0,53:53:99:2213,160,0	1/1:0,68:68:99:2840,205,0	1/1:0,28:28:84.28:1169,84,0	1/1:0,42:42:99:1754,126,0	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/0:149,0:149:99:0,448,6222	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:198,0:198:99:0,596,8269	0/0:154,0:154:99:0,464,6431	0/0:170,0:170:99:0,512,7099	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	1/1:0,22:22:66.22:919,66,0	1/1:0,134:134:99:5596,403,0
gi|293339394|gb|GU595196.1|	91648	.	A	T	20212.02	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.922;DP=2944;Dels=0.00;FS=100.849;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.049;QD=41.76;ReadPosRankSum=-0.520;SB=-7224.56	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	1/1:0,71:71:99:2965,214,0	1/1:0,95:95:99:3967,286,0	1/1:0,37:37:99:1545,111,0	1/1:0,70:70:99:2923,211,0	0/0:179,0:179:99:0,539,7475	0/0:159,0:159:99:0,479,6640	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:156,0:156:99:0,470,6515	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:155,0:155:99:0,467,6473	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:141,0:141:99:0,424,5888	1/1:0,40:40:99:1670,120,0	1/1:0,171:171:99:7141,515,0
gi|293339394|gb|GU595196.1|	91699	.	C	T	22550.60	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.120;DP=3199;Dels=0.00;FS=1.302;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.247;QD=41.76;ReadPosRankSum=3.479;SB=-10565.38	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:178,0:178:99:0,536,7433	1/1:0,110:110:99:4594,331,0	1/1:0,149:149:99:6222,448,0	1/1:0,39:39:99:1629,117,0	0/0:68,0:68:99:0,205,2840	0/0:193,0:193:99:0,581,8060	0/0:181,0:181:99:0,545,7559	0/0:156,0:156:99:0,470,6515	0/0:133,0:133:99:0,400,5554	0/0:187,0:187:99:0,563,7809	0/0:185,0:185:99:0,557,7726	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:183,0:183:99:0,551,7642	0/0:181,0:181:99:0,545,7559	0/0:179,0:179:99:0,539,7475	0/0:181,0:181:99:0,545,7559	1/1:0,74:74:99:3090,223,0	1/1:0,168:168:99:7016,506,0
gi|293339394|gb|GU595196.1|	91723	.	T	C	3883.73	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.541;DP=3077;Dels=0.00;FS=3.993;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.436;QD=41.76;ReadPosRankSum=-4.893;SB=-1878.81	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:175,0:175:99:0,527,7308	0/0:106,0:106:99:0,319,4427	0/0:147,0:147:99:0,442,6139	1/1:0,21:21:63.21:877,63,0	0/0:76,0:76:99:0,229,3174	0/0:192,0:192:99:0,578,8018	0/0:182,0:182:99:0,548,7600	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:186,0:186:99:0,560,7767	0/0:167,0:167:99:0,503,6974	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:186,0:186:99:0,560,7767	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:90,0:90:99:0,271,3758	1/1:0,72:72:99:3007,217,0
gi|293339394|gb|GU595196.1|	91741	.	C	T	12110.52	.	AC=10;AF=0.238;AN=42;BaseQRankSum=1.487;DP=2871;Dels=0.00;FS=0.693;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9853;MQ=254.00;MQ0=0;MQRankSum=1.980;QD=41.76;ReadPosRankSum=6.321;SB=-5635.93	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:157,0:157:99:0,473,6556	1/1:0,83:83:99:3466,250,0	1/1:0,120:120:99:5011,361,0	1/1:0,3:3:9.03:125,9,0	0/0:85,0:85:99:0,256,3550	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:171,0:171:99:0,515,7141	0/0:193,0:193:99:0,581,8060	0/0:155,0:155:99:0,467,6473	0/0:162,0:162:99:0,488,6765	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:150,0:150:99:0,452,6264	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	1/1:0,67:67:99:2798,202,0	1/1:0,17:17:51.17:710,51,0
gi|293339394|gb|GU595196.1|	91744	.	C	T	12653.40	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.096;DP=2902;Dels=0.00;FS=1.454;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=0.620;QD=41.76;ReadPosRankSum=4.652;SB=-6180.14	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:167,0:167:99:0,503,6974	1/1:0,78:78:99:3257,235,0	1/1:0,116:116:99:4844,349,0	1/1:0,9:9:27.09:376,27,0	0/0:87,0:87:99:0,262,3633	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	0/0:175,0:175:99:0,527,7308	0/0:186,0:186:99:0,560,7767	0/0:156,0:156:99:0,470,6515	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:155,0:155:99:0,467,6473	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	1/1:0,69:69:99:2881,208,0	1/1:0,31:31:93.31:1295,93,0
gi|293339394|gb|GU595196.1|	91777	.	G	C	6097.03	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.871;DP=2765;Dels=0.00;FS=2.580;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.396;QD=41.76;ReadPosRankSum=10.132;SB=-2964.64	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:174,0:174:99:0,524,7266	1/1:0,28:28:84.28:1169,84,0	1/1:0,32:32:96.32:1336,96,0	1/1:0,19:19:57.19:793,57,0	0/0:97,0:97:99:0,292,4051	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:171,0:171:99:0,515,7141	0/0:177,0:177:99:0,533,7392	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	0/0:160,0:160:99:0,482,6682	0/0:189,0:189:99:0,569,7893	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:158,0:158:99:0,476,6598	0/0:148,0:148:99:0,445,6181	0/0:161,0:161:99:0,485,6723	1/1:0,16:16:48.16:668,48,0	1/1:0,51:51:99:2130,154,0
gi|293339394|gb|GU595196.1|	91798	.	T	C	1461.21	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.786;DP=2619;Dels=0.00;FS=3.826;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9698;MQ=254.00;MQ0=0;MQRankSum=0.113;QD=38.45;ReadPosRankSum=-9.239;SB=-702.33	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	1/1:0,8:8:24.08:334,24,0	1/1:0,13:13:39.13:543,39,0	1/1:0,3:3:9.03:125,9,0	0/0:95,0:95:99:0,286,3967	0/0:154,0:154:99:0,464,6431	0/0:164,0:164:99:0,494,6849	0/0:156,0:156:99:0,470,6515	0/0:172,0:172:99:0,518,7183	0/0:156,0:156:99:0,470,6515	0/0:195,0:195:99:0,587,8143	0/0:164,0:164:99:0,494,6849	0/0:194,0:194:99:0,584,8102	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:149,0:149:99:0,448,6222	0/0:156,0:156:99:0,470,6515	0/0:145,0:145:99:0,436,6055	1/1:0,3:3:9.03:125,9,0	1/1:0,11:11:33.11:459,33,0
gi|293339394|gb|GU595196.1|	91801	.	G	C	1378.57	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.098;DP=2596;Dels=0.00;FS=2.103;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9662;MQ=254.00;MQ0=0;MQRankSum=0.353;QD=38.29;ReadPosRankSum=-9.080;SB=-704.22	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:176,0:176:99:0,530,7350	1/1:0,5:5:15.05:209,15,0	1/1:0,12:12:36.12:501,36,0	1/1:0,3:3:9.03:125,9,0	0/0:96,0:96:99:0,289,4009	0/0:151,0:151:99:0,455,6306	0/0:164,0:164:99:0,494,6849	0/0:144,0:144:99:0,433,6013	0/0:169,0:169:99:0,509,7057	0/0:155,0:155:99:0,467,6473	0/0:191,0:191:99:0,575,7976	0/0:163,0:163:99:0,491,6807	0/0:186,0:186:99:0,560,7767	0/0:181,0:181:99:0,545,7559	0/0:164,0:164:99:0,494,6849	0/0:154,0:154:99:0,464,6431	0/0:157,0:157:99:0,473,6556	0/0:148,0:148:99:0,445,6181	1/1:0,3:3:9.03:125,9,0	1/1:0,13:13:39.13:543,39,0
gi|293339394|gb|GU595196.1|	91807	.	G	C	4134.29	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.260;DP=2667;Dels=0.00;FS=2.686;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-0.308;QD=41.76;ReadPosRankSum=-10.453;SB=-1834.73	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	1/1:0,17:17:51.17:710,51,0	1/1:0,27:27:81.27:1128,81,0	1/1:0,17:17:51.17:710,51,0	0/0:93,0:93:99:0,280,3884	0/0:143,0:143:99:0,430,5972	0/0:166,0:166:99:0,500,6932	0/0:151,0:151:99:0,455,6306	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	0/0:194,0:194:99:0,584,8102	0/0:166,0:166:99:0,500,6932	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:156,0:156:99:0,470,6515	0/0:156,0:156:99:0,470,6515	0/0:159,0:159:99:0,479,6640	1/1:0,8:8:24.08:334,24,0	1/1:0,30:30:90.30:1253,90,0
gi|293339394|gb|GU595196.1|	91885	.	C	T	6765.19	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.393;DP=3350;Dels=0.00;FS=5.858;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.560;QD=41.76;ReadPosRankSum=-0.614;SB=-3090.28	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:181,0:181:99:0,545,7559	0/0:133,0:133:99:0,400,5554	0/0:162,0:162:99:0,488,6765	0/0:90,0:90:99:0,271,3758	0/0:109,0:109:99:0,328,4552	0/0:194,0:194:99:0,584,8102	0/0:183,0:183:99:0,551,7642	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:151,0:151:99:0,455,6306	0/0:159,0:159:99:0,479,6640	0/0:171,0:171:99:0,515,7141	0/0:177,0:177:99:0,533,7392	0/0:193,0:193:99:0,581,8060	0/0:173,0:173:99:0,521,7225	0/0:183,0:183:99:0,551,7642	0/0:176,0:176:99:0,530,7350	0/0:146,0:146:99:0,439,6097	0/0:106,0:106:99:0,319,4427	1/1:0,162:162:99:6765,488,0
gi|293339394|gb|GU595196.1|	92230	.	G	A	8059.76	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.082;DP=3433;Dels=0.00;FS=6.259;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.503;QD=41.76;ReadPosRankSum=-0.410;SB=-3674.93	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	0/0:152,0:152:99:0,458,6348	0/0:191,0:191:99:0,575,7976	0/0:84,0:84:99:0,253,3508	0/0:109,0:109:99:0,328,4552	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:186,0:186:99:0,560,7767	0/0:172,0:172:99:0,518,7183	0/0:181,0:181:99:0,545,7559	0/0:187,0:187:99:0,563,7809	0/0:194,0:194:99:0,584,8102	0/0:188,0:188:99:0,566,7851	0/0:151,0:151:99:0,455,6306	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	0/0:84,0:84:99:0,253,3508	1/1:0,193:193:99:8060,581,0
gi|293339394|gb|GU595196.1|	92407	.	G	A	16035.99	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.746;DP=3352;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.327;QD=41.76;ReadPosRankSum=1.460;SB=-7850.96	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:165,0:165:99:0,497,6890	1/1:0,141:141:99:5888,424,0	1/1:0,166:166:99:6932,500,0	0/0:85,0:85:99:0,256,3550	0/0:115,0:115:99:0,346,4802	0/0:192,0:192:99:0,578,8018	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:196,0:196:99:0,590,8185	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:164,0:164:99:0,494,6849	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:181,0:181:99:0,545,7559	1/1:0,77:77:99:3216,232,0	0/0:188,0:188:99:0,566,7851
gi|293339394|gb|GU595196.1|	92463	.	C	A	16328.31	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.382;DP=3427;Dels=0.00;FS=2.846;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.826;QD=41.76;ReadPosRankSum=0.292;SB=-7934.48	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:192,0:192:99:0,578,8018	1/1:0,137:137:99:5721,412,0	1/1:0,172:172:99:7183,518,0	0/0:83,0:83:99:0,250,3466	0/0:121,0:121:99:0,364,5053	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:199,0:199:99:0,599,8310	0/0:170,0:170:99:0,512,7099	0/0:188,0:188:99:0,566,7851	0/0:188,0:188:99:0,566,7851	0/0:182,0:182:99:0,548,7600	0/0:166,0:166:99:0,500,6932	1/1:0,82:82:99:3424,247,0	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	92611	.	G	A	20212.02	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.608;DP=3343;Dels=0.00;FS=15.152;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.328;QD=41.76;ReadPosRankSum=2.635;SB=-9270.81	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:189,0:189:99:0,569,7893	0/0:119,0:119:99:0,358,4969	0/0:175,0:175:99:0,527,7308	0/0:95,0:95:99:0,286,3967	1/1:0,129:129:99:5387,388,0	1/1:0,151:151:99:6306,455,0	0/0:156,0:156:99:0,470,6515	0/0:178,0:178:99:0,536,7433	0/0:183,0:183:99:0,551,7642	0/0:181,0:181:99:0,545,7559	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:70,0:70:99:0,211,2923	1/1:0,204:204:99:8519,614,0
gi|293339394|gb|GU595196.1|	92809	.	G	A	10481.86	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.261;DP=3223;Dels=0.00;FS=136.270;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.082;QD=41.76;ReadPosRankSum=0.762;SB=-2589.16	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	1/1:0,77:77:99:3216,232,0	1/1:0,116:116:99:4844,349,0	0/0:95,0:95:99:0,286,3967	0/0:100,0:100:99:0,301,4176	0/0:177,0:177:99:0,533,7392	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:188,0:188:99:0,566,7851	0/0:186,0:186:99:0,560,7767	0/0:189,0:189:99:0,569,7893	0/0:186,0:186:99:0,560,7767	0/0:141,0:141:99:0,424,5888	0/0:164,0:164:99:0,494,6849	0/0:159,0:159:99:0,479,6640	0/0:177,0:177:99:0,533,7392	0/0:178,0:178:99:0,536,7433	0/0:153,0:153:99:0,461,6389	1/1:0,58:58:99:2422,175,0	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	92812	.	C	T	10774.18	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.470;DP=3220;Dels=0.00;FS=141.683;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.262;QD=41.76;ReadPosRankSum=-0.880;SB=-2672.68	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	1/1:0,76:76:99:3174,229,0	1/1:0,123:123:99:5137,370,0	0/0:95,0:95:99:0,286,3967	0/0:91,0:91:99:0,274,3800	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:187,0:187:99:0,563,7809	0/0:180,0:180:99:0,542,7517	0/0:188,0:188:99:0,566,7851	0/0:192,0:192:99:0,578,8018	0/0:140,0:140:99:0,421,5846	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:179,0:179:99:0,539,7475	0/0:179,0:179:99:0,539,7475	0/0:156,0:156:99:0,470,6515	1/1:0,59:59:99:2464,178,0	0/0:195,0:195:99:0,587,8143
gi|293339394|gb|GU595196.1|	92953	.	G	A	30401.54	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.570;DP=3198;Dels=0.00;FS=42.280;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.124;QD=41.76;ReadPosRankSum=1.834;SB=-12402.84	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	1/1:0,78:78:99:3257,235,0	1/1:0,123:123:99:5137,370,0	0/0:84,0:84:99:0,253,3508	1/1:0,93:93:99:3884,280,0	1/1:0,194:194:99:8102,584,0	0/0:162,0:162:99:0,488,6765	0/0:151,0:151:99:0,455,6306	0/0:182,0:182:99:0,548,7600	0/0:180,0:180:99:0,542,7517	0/0:157,0:157:99:0,473,6556	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:189,0:189:99:0,569,7893	0/0:196,0:196:99:0,590,8185	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	1/1:0,70:70:99:2923,211,0	1/1:0,170:170:99:7099,512,0
gi|293339394|gb|GU595196.1|	92956	.	G	A	30234.50	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.210;DP=3195;Dels=0.00;FS=41.614;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.389;QD=41.76;ReadPosRankSum=1.162;SB=-12486.36	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	1/1:0,75:75:99:3132,226,0	1/1:0,119:119:99:4969,358,0	0/0:86,0:86:99:0,259,3591	1/1:0,100:100:99:4176,301,0	1/1:0,192:192:99:8018,578,0	0/0:161,0:161:99:0,485,6723	0/0:151,0:151:99:0,455,6306	0/0:184,0:184:99:0,554,7684	0/0:177,0:177:99:0,533,7392	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:181,0:181:99:0,545,7559	0/0:193,0:193:99:0,581,8060	0/0:172,0:172:99:0,518,7183	0/0:161,0:161:99:0,485,6723	1/1:0,69:69:99:2881,208,0	1/1:0,169:169:99:7057,509,0
gi|293339394|gb|GU595196.1|	93051	.	G	T	129.06	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.581;DP=2964;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8408;MQ=254.00;MQ0=0;MQRankSum=0.533;QD=25.81;ReadPosRankSum=-3.821;SB=-78.14	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	1/1:0,2:2:6.02:84,6,0	1/1:0,1:1:3.01:42,3,0	0/0:109,0:109:99:0,328,4552	0/0:95,0:95:99:0,286,3967	0/0:197,0:197:99:0,593,8227	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:185,0:185:99:0,557,7726	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:159,0:159:99:0,479,6640	0/0:202,0:202:99:0,608,8436	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	1/1:0,2:2:6.02:84,6,0	0/0:172,0:172:99:0,518,7183
gi|293339394|gb|GU595196.1|	93080	.	T	C	7516.88	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.126;DP=3134;Dels=0.00;FS=7.171;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.504;QD=41.76;ReadPosRankSum=7.605;SB=-3340.85	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:190,0:190:99:0,572,7934	1/1:0,57:57:99:2380,172,0	1/1:0,82:82:99:3424,247,0	0/0:105,0:105:99:0,316,4385	0/0:105,0:105:99:0,316,4385	0/0:190,0:190:99:0,572,7934	0/0:143,0:143:99:0,430,5972	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:176,0:176:99:0,530,7350	0/0:180,0:180:99:0,542,7517	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	1/1:0,41:41:99:1712,123,0	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	93107	.	T	C	5971.75	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.073;DP=3066;Dels=0.00;FS=7.655;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.356;QD=41.76;ReadPosRankSum=-5.094;SB=-2672.68	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:188,0:188:99:0,566,7851	1/1:0,42:42:99:1754,126,0	1/1:0,69:69:99:2881,208,0	0/0:87,0:87:99:0,262,3633	0/0:98,0:98:99:0,295,4093	0/0:180,0:180:99:0,542,7517	0/0:148,0:148:99:0,445,6181	0/0:154,0:154:99:0,464,6431	0/0:157,0:157:99:0,473,6556	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	0/0:182,0:182:99:0,548,7600	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	1/1:0,32:32:96.32:1336,96,0	0/0:210,0:210:99:0,632,8770
gi|293339394|gb|GU595196.1|	93125	.	A	C	326.83	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.810;DP=2971;Dels=0.00;FS=2.612;HRun=4;HaplotypeScore=0.0000;InbreedingCoeff=0.9303;MQ=254.00;MQ0=0;MQRankSum=-0.102;QD=32.68;ReadPosRankSum=-3.225;SB=-157.84	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:191,0:191:99:0,575,7976	1/1:0,3:3:9.03:125,9,0	1/1:0,5:5:15.05:209,15,0	0/0:89,0:89:99:0,268,3717	0/0:104,0:104:99:0,313,4343	0/0:192,0:192:99:0,578,8018	0/0:161,0:161:99:0,485,6723	0/0:157,0:157:99:0,473,6556	0/0:152,0:152:99:0,458,6348	0/0:164,0:164:99:0,494,6849	0/0:177,0:177:99:0,533,7392	0/0:169,0:169:99:0,509,7057	0/0:182,0:182:99:0,548,7600	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:159,0:159:99:0,479,6640	0/0:169,0:169:99:0,509,7057	1/1:0,2:2:6.02:84,6,0	0/0:220,0:220:99:0,662,9187
gi|293339394|gb|GU595196.1|	93140	.	A	T	9396.09	.	AC=2;AF=0.056;AN=36;BaseQRankSum=1.619;DP=2925;Dels=0.00;FS=5.255;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.260;QD=41.76;ReadPosRankSum=1.867;SB=-4384.85	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	./.	./.	0/0:89,0:89:99:0,268,3717	0/0:108,0:108:99:0,325,4510	0/0:195,0:195:99:0,587,8143	0/0:165,0:165:99:0,497,6890	0/0:157,0:157:99:0,473,6556	0/0:155,0:155:99:0,467,6473	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	./.	1/1:0,225:225:99:9396,677,0
gi|293339394|gb|GU595196.1|	93146	.	C	T	1691.64	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.216;DP=2918;Dels=0.00;FS=20.536;HRun=0;HaplotypeScore=2.0473;InbreedingCoeff=0.9970;MQ=254.00;MQ0=0;MQRankSum=0.008;QD=39.34;ReadPosRankSum=-8.200;SB=-538.97	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:182,0:182:99:0,548,7600	1/1:0,15:15:45.15:626,45,0	1/1:0,22:22:66.22:919,66,0	0/0:91,0:91:99:0,274,3800	0/0:99,0:99:99:0,298,4134	0/0:195,0:195:99:0,587,8143	0/0:162,0:162:99:0,488,6765	0/0:148,0:148:99:0,445,6181	0/0:159,0:159:99:0,479,6640	0/0:151,0:151:99:0,455,6306	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	0/0:185,0:185:99:0,557,7726	0/0:156,0:156:99:0,470,6515	0/0:163,0:163:99:0,491,6807	0/0:161,0:161:99:0,485,6723	0/0:159,0:159:99:0,479,6640	1/1:0,6:6:18.06:251,18,0	0/0:222,0:222:99:0,668,9271
gi|293339394|gb|GU595196.1|	93158	.	T	C	4802.46	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.496;DP=3007;Dels=0.00;FS=27.966;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.170;QD=41.76;ReadPosRankSum=-3.462;SB=-1670.42	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:184,0:184:99:0,554,7684	1/1:0,42:42:99:1754,126,0	1/1:0,55:55:99:2297,166,0	0/0:97,0:97:99:0,292,4051	0/0:111,0:111:99:0,334,4635	0/0:191,0:191:99:0,575,7976	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:145,0:145:99:0,436,6055	0/0:146,0:146:99:0,439,6097	0/0:182,0:182:99:0,548,7600	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:154,0:154:99:0,464,6431	0/0:173,0:173:99:0,521,7225	0/0:151,0:151:99:0,455,6306	0/0:164,0:164:99:0,494,6849	1/1:0,18:18:54.18:752,54,0	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	93206	.	G	A	10523.62	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.537;DP=3145;Dels=0.00;FS=189.991;HRun=5;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.558;QD=41.76;ReadPosRankSum=0.041;SB=-2255.08	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:185,0:185:99:0,557,7726	1/1:0,93:93:99:3884,280,0	1/1:0,106:106:99:4427,319,0	0/0:92,0:92:99:0,277,3842	0/0:112,0:112:99:0,337,4677	0/0:182,0:182:99:0,548,7600	0/0:150,0:150:99:0,452,6264	0/0:155,0:155:99:0,467,6473	0/0:167,0:167:99:0,503,6974	0/0:149,0:149:99:0,448,6222	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:149,0:149:99:0,448,6222	0/0:168,0:168:99:0,506,7016	0/0:184,0:184:99:0,554,7684	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	1/1:0,53:53:99:2213,160,0	0/0:174,0:174:99:0,524,7266
gi|293339394|gb|GU595196.1|	93250	.	G	A	4050.77	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.122;DP=3137;Dels=0.00;FS=147.079;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.685;QD=41.76;ReadPosRankSum=-2.291;SB=-417.61	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	1/1:0,39:39:99:1629,117,0	1/1:0,42:42:99:1754,126,0	0/0:69,0:69:99:0,208,2881	0/0:113,0:113:99:0,340,4719	0/0:213,0:213:99:0,641,8895	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:179,0:179:99:0,539,7475	0/0:183,0:183:99:0,551,7642	0/0:184,0:184:99:0,554,7684	0/0:186,0:186:99:0,560,7767	1/1:0,16:16:48.16:668,48,0	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	93254	.	T	G	4384.85	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.152;DP=3123;Dels=0.00;FS=139.034;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.770;QD=41.76;ReadPosRankSum=-7.257;SB=-542.90	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	1/1:0,37:37:99:1545,111,0	1/1:0,45:45:99:1879,135,0	0/0:72,0:72:99:0,217,3007	0/0:108,0:108:99:0,325,4510	0/0:213,0:213:99:0,641,8895	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	0/0:185,0:185:99:0,557,7726	0/0:186,0:186:99:0,560,7767	1/1:0,23:23:69.23:960,69,0	0/0:213,0:213:99:0,641,8895
gi|293339394|gb|GU595196.1|	93272	.	T	C	4885.98	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.523;DP=3060;Dels=0.00;FS=86.386;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.442;QD=41.76;ReadPosRankSum=-1.237;SB=-1044.03	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:180,0:180:99:0,542,7517	1/1:0,39:39:99:1629,117,0	1/1:0,47:47:99:1963,141,0	0/0:79,0:79:99:0,238,3299	0/0:94,0:94:99:0,283,3925	0/0:201,0:201:99:0,605,8394	0/0:162,0:162:99:0,488,6765	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:201,0:201:99:0,605,8394	0/0:154,0:154:99:0,464,6431	0/0:155,0:155:99:0,467,6473	0/0:160,0:160:99:0,482,6682	0/0:189,0:189:99:0,569,7893	0/0:172,0:172:99:0,518,7183	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	1/1:0,31:31:93.31:1295,93,0	0/0:214,0:214:99:0,644,8937
gi|293339394|gb|GU595196.1|	93351	.	G	A	12110.52	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.484;DP=3156;Dels=0.00;FS=121.360;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.304;QD=41.76;ReadPosRankSum=2.471;SB=-3382.61	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:179,0:179:99:0,539,7475	1/1:0,102:102:99:4260,307,0	1/1:0,122:122:99:5095,367,0	0/0:84,0:84:99:0,253,3508	0/0:110,0:110:99:0,331,4594	0/0:156,0:156:99:0,470,6515	0/0:140,0:140:99:0,421,5846	0/0:163,0:163:99:0,491,6807	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:190,0:190:99:0,572,7934	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:136,0:136:99:0,409,5679	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	0/0:146,0:146:99:0,439,6097	0/0:170,0:170:99:0,512,7099	1/1:0,66:66:99:2756,199,0	0/0:218,0:218:99:0,656,9104
gi|293339394|gb|GU595196.1|	93458	.	C	T	14449.09	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.231;DP=3432;Dels=0.00;FS=7.599;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.109;QD=41.76;ReadPosRankSum=0.899;SB=-6681.67	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	1/1:0,114:114:99:4761,343,0	1/1:0,160:160:99:6682,482,0	0/0:88,0:88:99:0,265,3675	0/0:112,0:112:99:0,337,4677	0/0:200,0:200:99:0,602,8352	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:179,0:179:99:0,539,7475	0/0:185,0:185:99:0,557,7726	0/0:152,0:152:99:0,458,6348	0/0:195,0:195:99:0,587,8143	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:200,0:200:99:0,602,8352	0/0:196,0:196:99:0,590,8185	0/0:190,0:190:99:0,572,7934	1/1:0,72:72:99:3007,217,0	0/0:212,0:212:99:0,638,8853
gi|293339394|gb|GU595196.1|	93500	.	T	C	15493.10	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.764;DP=3349;Dels=0.00;FS=3.556;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.803;QD=41.76;ReadPosRankSum=-0.207;SB=-7600.40	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	1/1:0,118:118:99:4928,355,0	1/1:0,173:173:99:7225,521,0	0/0:88,0:88:99:0,265,3675	0/0:120,0:120:99:0,361,5011	0/0:189,0:189:99:0,569,7893	0/0:170,0:170:99:0,512,7099	0/0:144,0:144:99:0,433,6013	0/0:177,0:177:99:0,533,7392	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:150,0:150:99:0,452,6264	0/0:194,0:194:99:0,584,8102	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	0/0:161,0:161:99:0,485,6723	0/0:152,0:152:99:0,458,6348	0/0:183,0:183:99:0,551,7642	1/1:0,80:80:99:3341,241,0	0/0:213,0:213:99:0,641,8895
gi|293339394|gb|GU595196.1|	93835	.	A	G	15534.86	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.416;DP=3376;Dels=0.00;FS=6.043;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.060;QD=41.76;ReadPosRankSum=-0.715;SB=-7391.60	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:190,0:190:99:0,572,7934	1/1:0,123:123:99:5137,370,0	1/1:0,165:165:99:6890,497,0	0/0:107,0:107:99:0,322,4468	0/0:105,0:105:99:0,316,4385	0/0:177,0:177:99:0,533,7392	0/0:154,0:154:99:0,464,6431	0/0:157,0:157:99:0,473,6556	0/0:185,0:185:99:0,557,7726	0/0:180,0:180:99:0,542,7517	0/0:169,0:169:99:0,509,7057	0/0:190,0:190:99:0,572,7934	0/0:150,0:150:99:0,452,6264	0/0:172,0:172:99:0,518,7183	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:189,0:189:99:0,569,7893	1/1:0,84:84:99:3508,253,0	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	93856	.	T	C	5679.42	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.129;DP=3306;Dels=0.00;FS=2.675;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.158;QD=41.76;ReadPosRankSum=1.696;SB=-2714.44	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:176,0:176:99:0,530,7350	1/1:0,136:136:99:5679,409,0	0/0:181,0:181:99:0,545,7559	0/0:98,0:98:99:0,295,4093	0/0:95,0:95:99:0,286,3967	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:140,0:140:99:0,421,5846	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:176,0:176:99:0,530,7350	0/0:152,0:152:99:0,458,6348	0/0:173,0:173:99:0,521,7225	0/0:177,0:177:99:0,533,7392	0/0:136,0:136:99:0,409,5679	0/0:161,0:161:99:0,485,6723	0/0:193,0:193:99:0,581,8060	0/0:85,0:85:99:0,256,3550	0/0:225,0:225:99:0,677,9396
gi|293339394|gb|GU595196.1|	93945	.	G	T	376.65	.	AC=1;AF=0.024;AN=42;BaseQRankSum=-0.974;DP=3238;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=1.6664;InbreedingCoeff=-0.0244;MQ=254.00;MQ0=0;MQRankSum=-0.526;QD=13.95;ReadPosRankSum=-5.619;SB=-208.44	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:190,0:190:99:0,572,7934	0/0:117,0:117:99:0,352,4886	0/0:166,0:166:99:0,500,6932	0/0:87,0:87:99:0,262,3633	0/0:111,0:111:99:0,334,4635	0/0:160,0:160:99:0,482,6682	0/1:15,12:27:99:420,0,545	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:194,0:194:99:0,584,8102	0/0:181,0:181:99:0,545,7559	0/0:161,0:161:99:0,485,6723	0/0:179,0:179:99:0,539,7475	0/0:182,0:182:99:0,548,7600	0/0:181,0:181:99:0,545,7559	0/0:166,0:166:99:0,500,6932	0/0:96,0:96:99:0,289,4009	0/0:177,0:177:99:0,533,7392
gi|293339394|gb|GU595196.1|	93947	.	C	A,T	1034.43	.	AC=1,1;AF=0.024,0.024;AN=42;BaseQRankSum=0.205;DP=3220;Dels=0.00;FS=0.000;HaplotypeScore=0.5237;InbreedingCoeff=-Infinity;MQ=254.00;MQ0=0;MQRankSum=0.004;QD=35.67;ReadPosRankSum=-7.943;SB=-542.52	GT:AD:DP:GQ:PL	0/0:160,0,0:160:99:0,482,6682,482,6682,6682	0/0:197,0,0:197:99:0,593,8227,593,8227,8227	0/0:111,0,0:111:99:0,334,4635,334,4635,4635	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	0/0:86,0,0:86:99:0,259,3591,259,3591,3591	0/0:108,0,0:108:99:0,325,4510,325,4510,4510	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	1/2:0,20,9:29:99:1124,349,289,775,0,748	0/0:174,0,0:174:99:0,524,7266,524,7266,7266	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	0/0:186,0,0:186:99:0,560,7767,560,7767,7767	0/0:193,0,0:193:99:0,581,8060,581,8060,8060	0/0:178,0,0:178:99:0,536,7433,536,7433,7433	0/0:160,0,0:160:99:0,482,6682,482,6682,6682	0/0:178,0,0:178:99:0,536,7433,536,7433,7433	0/0:176,0,0:176:99:0,530,7350,530,7350,7350	0/0:178,0,0:178:99:0,536,7433,536,7433,7433	0/0:162,0,0:162:99:0,488,6765,488,6765,6765	0/0:96,0,0:96:99:0,289,4009,289,4009,4009	0/0:184,0,0:184:99:0,554,7684,554,7684,7684
gi|293339394|gb|GU595196.1|	93949	.	C	T	15576.62	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.466;DP=3195;Dels=0.00;FS=7.731;HRun=1;HaplotypeScore=1.7141;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.337;QD=41.76;ReadPosRankSum=-0.497;SB=-7141.04	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:199,0:199:99:0,599,8310	1/1:0,114:114:99:4761,343,0	1/1:0,161:161:99:6723,485,0	0/0:89,0:89:99:0,268,3717	0/0:99,0:99:99:0,298,4134	0/0:156,0:156:99:0,470,6515	0/0:26,0:28:78.26:0,78,1086	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:190,0:190:99:0,572,7934	0/0:195,0:195:99:0,587,8143	0/0:178,0:178:99:0,536,7433	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	1/1:0,98:98:99:4093,295,0	0/0:178,0:178:99:0,536,7433
gi|293339394|gb|GU595196.1|	94112	.	A	G	16578.87	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.294;DP=3310;Dels=0.00;FS=1.497;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.446;QD=41.76;ReadPosRankSum=0.750;SB=-8268.56	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	1/1:0,126:126:99:5262,379,0	1/1:0,176:176:99:7350,530,0	0/0:104,0:104:99:0,313,4343	0/0:115,0:115:99:0,346,4802	0/0:164,0:164:99:0,494,6849	0/0:102,0:102:99:0,307,4260	0/0:161,0:161:99:0,485,6723	0/0:188,0:188:99:0,566,7851	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:162,0:162:99:0,488,6765	0/0:183,0:183:99:0,551,7642	0/0:178,0:178:99:0,536,7433	1/1:0,95:95:99:3967,286,0	0/0:199,0:199:99:0,599,8310
gi|293339394|gb|GU595196.1|	94139	.	T	C	132.11	.	AC=1;AF=0.024;AN=42;BaseQRankSum=0.631;DP=3166;Dels=0.00;FS=1.629;HRun=2;HaplotypeScore=0.3809;InbreedingCoeff=-0.0244;MQ=254.00;MQ0=0;MQRankSum=0.000;QD=5.28;ReadPosRankSum=-3.966;SB=-59.46	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:136,0:136:99:0,409,5679	0/0:167,0:167:99:0,503,6974	0/0:93,0:93:99:0,280,3884	0/0:123,0:123:99:0,370,5137	0/0:158,0:158:99:0,476,6598	0/1:19,6:25:99:175,0,718	0/0:157,0:157:99:0,473,6556	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:190,0:190:99:0,572,7934	0/0:172,0:172:99:0,518,7183	0/0:155,0:155:99:0,467,6473	0/0:180,0:180:99:0,542,7517	0/0:86,0:86:99:0,259,3591	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	94142	.	G	C	331.88	.	AC=1;AF=0.024;AN=42;BaseQRankSum=-1.521;DP=3189;Dels=0.00;FS=2.610;HRun=2;HaplotypeScore=0.3809;InbreedingCoeff=-0.0244;MQ=254.00;MQ0=0;MQRankSum=-0.914;QD=11.85;ReadPosRankSum=-4.719;SB=-136.96	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:161,0:161:99:0,485,6723	0/0:133,0:133:99:0,400,5554	0/0:165,0:165:99:0,497,6890	0/0:92,0:92:99:0,277,3842	0/0:122,0:122:99:0,367,5095	0/0:168,0:168:99:0,506,7016	0/1:17,11:28:99:375,0,626	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	0/0:176,0:176:99:0,530,7350	0/0:171,0:171:99:0,515,7141	0/0:191,0:191:99:0,575,7976	0/0:176,0:176:99:0,530,7350	0/0:155,0:155:99:0,467,6473	0/0:176,0:176:99:0,530,7350	0/0:88,0:88:99:0,265,3675	0/0:190,0:190:99:0,572,7934
gi|293339394|gb|GU595196.1|	94470	.	C	T	7182.80	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.242;DP=3506;Dels=0.00;FS=1.222;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.771;QD=41.76;ReadPosRankSum=0.694;SB=-3507.89	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:185,0:185:99:0,557,7726	0/0:139,0:139:99:0,418,5805	0/0:170,0:170:99:0,512,7099	0/0:90,0:90:99:0,271,3758	0/0:115,0:115:99:0,346,4802	0/0:194,0:194:99:0,584,8102	1/1:0,172:172:99:7183,518,0	0/0:158,0:158:99:0,476,6598	0/0:180,0:180:99:0,542,7517	0/0:173,0:173:99:0,521,7225	0/0:186,0:186:99:0,560,7767	0/0:171,0:171:99:0,515,7141	0/0:202,0:202:99:0,608,8436	0/0:182,0:182:99:0,548,7600	0/0:187,0:187:99:0,563,7809	0/0:165,0:165:99:0,497,6890	0/0:183,0:183:99:0,551,7642	0/0:169,0:169:99:0,509,7057	0/0:93,0:93:99:0,280,3884	0/0:233,0:233:99:0,701,9730
gi|293339394|gb|GU595196.1|	94485	.	G	A	7224.56	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.840;DP=3416;Dels=0.00;FS=2.733;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.262;QD=41.76;ReadPosRankSum=1.481;SB=-3466.13	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:173,0:173:99:0,521,7225	0/0:136,0:136:99:0,409,5679	0/0:162,0:162:99:0,488,6765	0/0:99,0:99:99:0,298,4134	0/0:123,0:123:99:0,370,5137	0/0:198,0:198:99:0,596,8269	1/1:0,173:173:99:7225,521,0	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:157,0:157:99:0,473,6556	0/0:185,0:185:99:0,557,7726	0/0:160,0:160:99:0,482,6682	0/0:191,0:191:99:0,575,7976	0/0:171,0:171:99:0,515,7141	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	0/0:194,0:194:99:0,584,8102	0/0:162,0:162:99:0,488,6765	0/0:93,0:93:99:0,280,3884	0/0:224,0:224:99:0,674,9354
gi|293339394|gb|GU595196.1|	94532	.	A	C	7057.52	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.598;DP=3407;Dels=0.00;FS=2.772;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.756;QD=41.76;ReadPosRankSum=0.847;SB=-3215.56	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:148,0:148:99:0,445,6181	0/0:118,0:118:99:0,355,4928	0/0:160,0:160:99:0,482,6682	0/0:91,0:91:99:0,274,3800	0/0:127,0:127:99:0,382,5304	0/0:162,0:162:99:0,488,6765	1/1:0,169:169:99:7057,509,0	0/0:174,0:174:99:0,524,7266	0/0:153,0:153:99:0,461,6389	0/0:171,0:171:99:0,515,7141	0/0:197,0:197:99:0,593,8227	0/0:207,0:207:99:0,623,8644	0/0:177,0:177:99:0,533,7392	0/0:188,0:188:99:0,566,7851	0/0:156,0:156:99:0,470,6515	0/0:187,0:187:99:0,563,7809	0/0:190,0:190:99:0,572,7934	0/0:174,0:174:99:0,524,7266	0/0:81,0:81:99:0,244,3383	0/0:203,0:203:99:0,611,8477
gi|293339394|gb|GU595196.1|	94598	.	C	T	11943.47	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.401;DP=3281;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.884;QD=41.76;ReadPosRankSum=0.616;SB=-5721.18	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:163,0:163:99:0,491,6807	1/1:0,115:115:99:4802,346,0	1/1:0,171:171:99:7141,515,0	0/0:92,0:92:99:0,277,3842	0/0:112,0:112:99:0,337,4677	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	0/0:164,0:164:99:0,494,6849	0/0:163,0:163:99:0,491,6807	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:189,0:189:99:0,569,7893	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:144,0:144:99:0,433,6013	0/0:165,0:165:99:0,497,6890	0/0:90,0:90:99:0,271,3758	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	94626	.	C	A	15284.30	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.795;DP=3252;Dels=0.00;FS=2.094;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.751;QD=41.76;ReadPosRankSum=-0.381;SB=-7266.32	GT:AD:DP:GQ:PL	0/0:198,0:198:99:0,596,8269	0/0:157,0:157:99:0,473,6556	1/1:0,124:124:99:5178,373,0	1/1:0,169:169:99:7057,509,0	0/0:87,0:87:99:0,262,3633	0/0:118,0:118:99:0,355,4928	0/0:174,0:174:99:0,524,7266	0/0:134,0:134:99:0,403,5596	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	0/0:194,0:194:99:0,584,8102	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:135,0:135:99:0,406,5638	0/0:144,0:144:99:0,433,6013	1/1:0,73:73:99:3049,220,0	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	94688	.	A	C	4510.13	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.506;DP=3271;Dels=0.00;FS=32.544;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.728;QD=41.76;ReadPosRankSum=0.365;SB=-1419.87	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:117,0:117:99:0,352,4886	0/0:157,0:157:99:0,473,6556	0/0:95,0:95:99:0,286,3967	0/0:105,0:105:99:0,316,4385	0/0:192,0:192:99:0,578,8018	1/1:0,108:108:99:4510,325,0	0/0:153,0:153:99:0,461,6389	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:187,0:187:99:0,563,7809	0/0:190,0:190:99:0,572,7934	0/0:175,0:175:99:0,527,7308	0/0:151,0:151:99:0,455,6306	0/0:145,0:145:99:0,436,6055	0/0:159,0:159:99:0,479,6640	0/0:183,0:183:99:0,551,7642	0/0:175,0:175:99:0,527,7308	0/0:89,0:89:99:0,268,3717	0/0:245,0:245:99:0,737,10231
gi|293339394|gb|GU595196.1|	94796	.	C	T	6013.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.543;DP=3207;Dels=0.00;FS=39.563;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.529;QD=41.76;ReadPosRankSum=-1.908;SB=-2004.51	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	0/0:113,0:113:99:0,340,4719	0/0:171,0:171:99:0,515,7141	0/0:73,0:73:99:0,220,3049	0/0:111,0:111:99:0,334,4635	0/0:153,0:153:99:0,461,6389	1/1:0,144:144:99:6013,433,0	0/0:146,0:146:99:0,439,6097	0/0:155,0:155:99:0,467,6473	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	0/0:189,0:189:99:0,569,7893	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	0/0:165,0:165:99:0,497,6890	0/0:99,0:99:99:0,298,4134	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	94803	.	C	T	6055.27	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.934;DP=3219;Dels=0.00;FS=27.997;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.076;QD=41.76;ReadPosRankSum=0.143;SB=-2213.32	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:161,0:161:99:0,485,6723	0/0:107,0:107:99:0,322,4468	0/0:173,0:173:99:0,521,7225	0/0:78,0:78:99:0,235,3257	0/0:101,0:101:99:0,304,4218	0/0:153,0:153:99:0,461,6389	1/1:0,145:145:99:6055,436,0	0/0:147,0:147:99:0,442,6139	0/0:160,0:160:99:0,482,6682	0/0:166,0:166:99:0,500,6932	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	0/0:158,0:158:99:0,476,6598	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:99,0:99:99:0,298,4134	0/0:182,0:182:99:0,548,7600
gi|293339394|gb|GU595196.1|	94844	.	G	A	11609.39	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.576;DP=3170;Dels=0.00;FS=6.329;HRun=0;HaplotypeScore=1.7141;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.525;QD=41.76;ReadPosRankSum=0.331;SB=-5303.58	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:142,0:142:99:0,427,5930	0/0:105,0:105:99:0,316,4385	0/0:164,0:164:99:0,494,6849	0/0:89,0:89:99:0,268,3717	1/1:0,94:94:99:3925,283,0	1/1:0,184:184:99:7684,554,0	0/0:37,0:37:99:0,111,1545	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:194,0:194:99:0,584,8102	0/0:168,0:168:99:0,506,7016	0/0:192,0:192:99:0,578,8018	0/0:191,0:191:99:0,575,7976	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:85,0:85:99:0,256,3550	0/0:187,0:187:99:0,563,7809
gi|293339394|gb|GU595196.1|	94847	.	C	G	1106.95	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.514;DP=3171;Dels=0.00;FS=0.704;HRun=4;HaplotypeScore=1.7141;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.657;QD=39.53;ReadPosRankSum=-5.820;SB=-542.89	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:146,0:146:99:0,439,6097	0/0:109,0:109:99:0,328,4552	0/0:163,0:163:99:0,491,6807	0/0:91,0:91:99:0,274,3800	0/0:95,0:95:99:0,286,3967	0/0:193,0:193:99:0,581,8060	1/1:0,28:28:84.28:1169,84,0	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	0/0:187,0:187:99:0,563,7809	0/0:164,0:164:99:0,494,6849	0/0:190,0:190:99:0,572,7934	0/0:188,0:188:99:0,566,7851	0/0:181,0:181:99:0,545,7559	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:153,0:153:99:0,461,6389	0/0:89,0:89:99:0,268,3717	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	94853	.	C	G	272.95	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.049;DP=3185;Dels=0.00;FS=1.388;HRun=1;HaplotypeScore=0.7618;InbreedingCoeff=0.9980;MQ=254.00;MQ0=0;MQRankSum=-0.919;QD=34.12;ReadPosRankSum=-4.196;SB=-120.99	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:137,0:137:99:0,412,5721	0/0:117,0:117:99:0,352,4886	0/0:170,0:170:99:0,512,7099	0/0:85,0:85:99:0,256,3550	0/0:97,0:97:99:0,292,4051	0/0:192,0:192:99:0,578,8018	1/1:0,8:8:24.08:334,24,0	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:155,0:155:99:0,467,6473	0/0:196,0:196:99:0,590,8185	0/0:166,0:166:99:0,500,6932	0/0:192,0:192:99:0,578,8018	0/0:187,0:187:99:0,563,7809	0/0:172,0:172:99:0,518,7183	0/0:181,0:181:99:0,545,7559	0/0:183,0:183:99:0,551,7642	0/0:154,0:154:99:0,464,6431	0/0:86,0:86:99:0,259,3591	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	94889	.	G	T	397.19	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.623;DP=3212;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=1.097;QD=36.11;ReadPosRankSum=-4.773;SB=-205.41	GT:AD:DP:GQ:PL	0/0:192,0:192:99:0,578,8018	0/0:170,0:170:99:0,512,7099	0/0:126,0:126:99:0,379,5262	0/0:172,0:172:99:0,518,7183	0/0:85,0:85:99:0,256,3550	0/0:106,0:106:99:0,319,4427	0/0:169,0:169:99:0,509,7057	1/1:0,11:11:33.11:459,33,0	0/0:152,0:152:99:0,458,6348	0/0:174,0:174:99:0,524,7266	0/0:179,0:179:99:0,539,7475	0/0:182,0:182:99:0,548,7600	0/0:181,0:181:99:0,545,7559	0/0:194,0:194:99:0,584,8102	0/0:149,0:149:99:0,448,6222	0/0:185,0:185:99:0,557,7726	0/0:181,0:181:99:0,545,7559	0/0:156,0:156:99:0,470,6515	0/0:159,0:159:99:0,479,6640	0/0:85,0:85:99:0,256,3550	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	94901	.	C	T	1232.23	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.679;DP=3233;Dels=0.00;FS=3.269;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.595;QD=39.75;ReadPosRankSum=-2.881;SB=-542.90	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:182,0:182:99:0,548,7600	0/0:118,0:118:99:0,355,4928	0/0:159,0:159:99:0,479,6640	0/0:98,0:98:99:0,295,4093	0/0:110,0:110:99:0,331,4594	0/0:161,0:161:99:0,485,6723	1/1:0,31:31:93.31:1295,93,0	0/0:154,0:154:99:0,464,6431	0/0:173,0:173:99:0,521,7225	0/0:184,0:184:99:0,554,7684	0/0:185,0:185:99:0,557,7726	0/0:192,0:192:99:0,578,8018	0/0:194,0:194:99:0,584,8102	0/0:152,0:152:99:0,458,6348	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	0/0:144,0:144:99:0,433,6013	0/0:174,0:174:99:0,524,7266	0/0:82,0:82:99:0,247,3424	0/0:213,0:213:99:0,641,8895
gi|293339394|gb|GU595196.1|	94949	.	G	T	1816.87	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.147;DP=3177;Dels=0.00;FS=75.536;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.207;QD=40.37;ReadPosRankSum=-4.257;SB=-208.82	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:120,0:120:99:0,361,5011	0/0:160,0:160:99:0,482,6682	0/0:97,0:97:99:0,292,4051	0/0:94,0:94:99:0,283,3925	0/0:167,0:167:99:0,503,6974	1/1:0,45:45:99:1879,135,0	0/0:151,0:151:99:0,455,6306	0/0:184,0:184:99:0,554,7684	0/0:170,0:170:99:0,512,7099	0/0:155,0:155:99:0,467,6473	0/0:181,0:181:99:0,545,7559	0/0:179,0:179:99:0,539,7475	0/0:163,0:163:99:0,491,6807	0/0:156,0:156:99:0,470,6515	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:91,0:91:99:0,274,3800	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	94966	.	G	A	1691.59	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.722;DP=3209;Dels=0.00;FS=58.852;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.809;QD=40.28;ReadPosRankSum=-4.449;SB=-250.58	GT:AD:DP:GQ:PL	0/0:195,0:195:99:0,587,8143	0/0:174,0:174:99:0,524,7266	0/0:136,0:136:99:0,409,5679	0/0:169,0:169:99:0,509,7057	0/0:87,0:87:99:0,262,3633	0/0:108,0:108:99:0,325,4510	0/0:156,0:156:99:0,470,6515	1/1:0,42:42:99:1754,126,0	0/0:152,0:152:99:0,458,6348	0/0:193,0:193:99:0,581,8060	0/0:160,0:160:99:0,482,6682	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:153,0:153:99:0,461,6389	0/0:160,0:160:99:0,482,6682	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:96,0:96:99:0,289,4009	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	94967	.	A	G	1649.83	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.869;DP=3220;Dels=0.00;FS=56.442;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.910;QD=40.24;ReadPosRankSum=-3.351;SB=-250.58	GT:AD:DP:GQ:PL	0/0:195,0:195:99:0,587,8143	0/0:176,0:176:99:0,530,7350	0/0:134,0:134:99:0,403,5596	0/0:168,0:168:99:0,506,7016	0/0:86,0:86:99:0,259,3591	0/0:106,0:106:99:0,319,4427	0/0:151,0:151:99:0,455,6306	1/1:0,41:41:99:1712,123,0	0/0:155,0:155:99:0,467,6473	0/0:197,0:197:99:0,593,8227	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:183,0:183:99:0,551,7642	0/0:171,0:171:99:0,515,7141	0/0:153,0:153:99:0,461,6389	0/0:158,0:158:99:0,476,6598	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:94,0:94:99:0,283,3925	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	95019	.	C	A	2067.44	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.299;DP=3226;Dels=0.00;FS=97.222;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.526;QD=40.54;ReadPosRankSum=1.470;SB=-167.06	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:130,0:130:99:0,391,5429	0/0:175,0:175:99:0,527,7308	0/0:98,0:98:99:0,295,4093	0/0:109,0:109:99:0,328,4552	0/0:183,0:183:99:0,551,7642	1/1:0,51:51:99:2130,154,0	0/0:155,0:155:99:0,467,6473	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	0/0:181,0:181:99:0,545,7559	0/0:174,0:174:99:0,524,7266	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:87,0:87:99:0,262,3633	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	95097	.	A	G	355.60	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.368;DP=3182;Dels=0.00;FS=30.799;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=2.051;QD=35.56;ReadPosRankSum=-2.002;SB=-0.02	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	0/0:124,0:124:99:0,373,5178	0/0:152,0:152:99:0,458,6348	0/0:74,0:74:99:0,223,3090	0/0:115,0:115:99:0,346,4802	0/0:150,0:150:99:0,452,6264	1/1:0,10:10:30.10:418,30,0	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:192,0:192:99:0,578,8018	0/0:190,0:190:99:0,572,7934	0/0:157,0:157:99:0,473,6556	0/0:186,0:186:99:0,560,7767	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:189,0:189:99:0,569,7893	0/0:185,0:185:99:0,557,7726	0/0:181,0:181:99:0,545,7559	0/0:84,0:84:99:0,253,3508	0/0:187,0:187:99:0,563,7809
gi|293339394|gb|GU595196.1|	95115	.	T	A	731.11	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.318;DP=3244;Dels=0.00;FS=54.334;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.140;QD=38.48;ReadPosRankSum=2.072;SB=-0.02	GT:AD:DP:GQ:PL	0/0:190,0:190:99:0,572,7934	0/0:162,0:162:99:0,488,6765	0/0:109,0:109:99:0,328,4552	0/0:156,0:156:99:0,470,6515	0/0:88,0:88:99:0,265,3675	0/0:123,0:123:99:0,370,5137	0/0:157,0:157:99:0,473,6556	1/1:0,19:19:57.19:793,57,0	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:207,0:207:99:0,623,8644	0/0:195,0:195:99:0,587,8143	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:187,0:187:99:0,563,7809	0/0:176,0:176:99:0,530,7350	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:92,0:92:99:0,277,3842	0/0:187,0:187:99:0,563,7809
gi|293339394|gb|GU595196.1|	95142	.	C	A	16704.15	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.353;DP=3221;Dels=0.00;FS=11.611;HRun=0;HaplotypeScore=0.7618;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.219;QD=41.76;ReadPosRankSum=0.002;SB=-7933.13	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	1/1:0,124:124:99:5178,373,0	1/1:0,181:181:99:7559,545,0	0/0:84,0:84:99:0,253,3508	0/0:114,0:114:99:0,343,4761	0/0:176,0:176:99:0,530,7350	0/0:20,0:20:60.20:0,60,835	0/0:180,0:180:99:0,542,7517	0/0:189,0:189:99:0,569,7893	0/0:186,0:186:99:0,560,7767	0/0:176,0:176:99:0,530,7350	0/0:150,0:150:99:0,452,6264	0/0:193,0:193:99:0,581,8060	0/0:154,0:154:99:0,464,6431	0/0:174,0:174:99:0,524,7266	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	1/1:0,95:95:99:3967,286,0	0/0:187,0:187:99:0,563,7809
gi|293339394|gb|GU595196.1|	95150	.	G	C	605.83	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.210;DP=3228;Dels=0.00;FS=44.588;HRun=0;HaplotypeScore=1.0951;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.334;QD=37.86;ReadPosRankSum=-0.358;SB=-0.02	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:125,0:125:99:0,376,5220	0/0:179,0:179:99:0,539,7475	0/0:92,0:92:99:0,277,3842	0/0:110,0:110:99:0,331,4594	0/0:183,0:183:99:0,551,7642	1/1:0,16:16:48.16:668,48,0	0/0:176,0:176:99:0,530,7350	0/0:184,0:184:99:0,554,7684	0/0:191,0:191:99:0,575,7976	0/0:176,0:176:99:0,530,7350	0/0:154,0:154:99:0,464,6431	0/0:190,0:190:99:0,572,7934	0/0:151,0:151:99:0,455,6306	0/0:186,0:186:99:0,560,7767	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:84,0:84:99:0,253,3508	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	95160	.	A	G	232.13	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.438;DP=3222;Dels=0.00;FS=17.969;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=0.9959;MQ=254.00;MQ0=0;MQRankSum=-0.080;QD=33.16;ReadPosRankSum=-0.554;SB=-0.02	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:182,0:182:99:0,548,7600	0/0:133,0:133:99:0,400,5554	0/0:180,0:180:99:0,542,7517	0/0:85,0:85:99:0,256,3550	0/0:103,0:103:99:0,310,4301	0/0:183,0:183:99:0,551,7642	1/1:0,7:7:21.07:292,21,0	0/0:186,0:186:99:0,560,7767	0/0:181,0:181:99:0,545,7559	0/0:186,0:186:99:0,560,7767	0/0:175,0:175:99:0,527,7308	0/0:156,0:156:99:0,470,6515	0/0:187,0:187:99:0,563,7809	0/0:149,0:149:99:0,448,6222	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:72,0:72:99:0,217,3007	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	95217	.	G	A	15117.26	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-1.784;DP=3137;Dels=0.00;FS=1.079;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.527;QD=41.76;ReadPosRankSum=-1.220;SB=-7433.36	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	1/1:0,117:117:99:4886,352,0	1/1:0,159:159:99:6640,479,0	0/0:85,0:85:99:0,256,3550	0/0:115,0:115:99:0,346,4802	0/0:176,0:176:99:0,530,7350	./.	0/0:152,0:152:99:0,458,6348	0/0:170,0:170:99:0,512,7099	0/0:188,0:188:99:0,566,7851	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	1/1:0,86:86:99:3591,259,0	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	95280	.	G	A	15994.23	.	AC=6;AF=0.150;AN=40;BaseQRankSum=1.623;DP=3235;Dels=0.00;FS=5.578;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.847;QD=41.76;ReadPosRankSum=-0.938;SB=-7391.60	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	1/1:0,123:123:99:5137,370,0	1/1:0,166:166:99:6932,500,0	0/0:84,0:84:99:0,253,3508	0/0:115,0:115:99:0,346,4802	0/0:151,0:151:99:0,455,6306	./.	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:183,0:183:99:0,551,7642	0/0:206,0:206:99:0,620,8603	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:208,0:208:99:0,626,8686	0/0:190,0:190:99:0,572,7934	0/0:179,0:179:99:0,539,7475	1/1:0,94:94:99:3925,283,0	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	95532	.	C	T	232.13	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.250;DP=3196;Dels=0.00;FS=18.080;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9959;MQ=254.00;MQ0=0;MQRankSum=-1.860;QD=33.16;ReadPosRankSum=-3.852;SB=-0.02	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:113,0:113:99:0,340,4719	0/0:156,0:156:99:0,470,6515	0/0:94,0:94:99:0,283,3925	0/0:114,0:114:99:0,343,4761	0/0:197,0:197:99:0,593,8227	1/1:0,7:7:21.07:292,21,0	0/0:159,0:159:99:0,479,6640	0/0:198,0:198:99:0,596,8269	0/0:154,0:154:99:0,464,6431	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:143,0:143:99:0,430,5972	0/0:186,0:186:99:0,560,7767	0/0:183,0:183:99:0,551,7642	0/0:172,0:172:99:0,518,7183	0/0:159,0:159:99:0,479,6640	0/0:92,0:92:99:0,277,3842	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	95533	.	A	C	355.60	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.055;DP=3200;Dels=0.00;FS=27.141;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-0.521;QD=35.56;ReadPosRankSum=-4.506;SB=-0.02	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:184,0:184:99:0,554,7684	0/0:110,0:110:99:0,331,4594	0/0:159,0:159:99:0,479,6640	0/0:96,0:96:99:0,289,4009	0/0:116,0:116:99:0,349,4844	0/0:198,0:198:99:0,596,8269	1/1:0,10:10:30.10:418,30,0	0/0:162,0:162:99:0,488,6765	0/0:196,0:196:99:0,590,8185	0/0:151,0:151:99:0,455,6306	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:181,0:181:99:0,545,7559	0/0:144,0:144:99:0,433,6013	0/0:184,0:184:99:0,554,7684	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	0/0:88,0:88:99:0,265,3675	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	95588	.	T	C	1106.95	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.964;DP=3135;Dels=0.00;FS=81.717;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.483;QD=39.53;ReadPosRankSum=-2.152;SB=-0.02	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:132,0:132:99:0,397,5512	0/0:151,0:151:99:0,455,6306	0/0:92,0:92:99:0,277,3842	0/0:122,0:122:99:0,367,5095	0/0:170,0:170:99:0,512,7099	1/1:0,28:28:84.28:1169,84,0	0/0:147,0:147:99:0,442,6139	0/0:162,0:162:99:0,488,6765	0/0:151,0:151:99:0,455,6306	0/0:184,0:184:99:0,554,7684	0/0:152,0:152:99:0,458,6348	0/0:181,0:181:99:0,545,7559	0/0:161,0:161:99:0,485,6723	0/0:184,0:184:99:0,554,7684	0/0:193,0:193:99:0,581,8060	0/0:149,0:149:99:0,448,6222	0/0:136,0:136:99:0,409,5679	0/0:93,0:93:99:0,280,3884	0/0:202,0:202:99:0,608,8436
gi|293339394|gb|GU595196.1|	95591	.	C	A	1106.95	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.279;DP=3147;Dels=0.00;FS=81.623;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.360;QD=39.53;ReadPosRankSum=-4.141;SB=-0.02	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:135,0:135:99:0,406,5638	0/0:153,0:153:99:0,461,6389	0/0:91,0:91:99:0,274,3800	0/0:124,0:124:99:0,373,5178	0/0:172,0:172:99:0,518,7183	1/1:0,28:28:84.28:1169,84,0	0/0:156,0:156:99:0,470,6515	0/0:161,0:161:99:0,485,6723	0/0:145,0:145:99:0,436,6055	0/0:177,0:177:99:0,533,7392	0/0:155,0:155:99:0,467,6473	0/0:183,0:183:99:0,551,7642	0/0:164,0:164:99:0,494,6849	0/0:190,0:190:99:0,572,7934	0/0:186,0:186:99:0,560,7767	0/0:141,0:141:99:0,424,5888	0/0:133,0:133:99:0,400,5554	0/0:96,0:96:99:0,289,4009	0/0:209,0:209:99:0,629,8728
gi|293339394|gb|GU595196.1|	95605	.	T	A	1065.19	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.109;DP=3197;Dels=0.00;FS=78.275;HRun=1;HaplotypeScore=1.2855;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.915;QD=39.45;ReadPosRankSum=-3.505;SB=-0.02	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:137,0:137:99:0,412,5721	0/0:165,0:165:99:0,497,6890	0/0:80,0:80:99:0,241,3341	0/0:114,0:114:99:0,343,4761	0/0:185,0:185:99:0,557,7726	1/1:0,27:27:81.27:1128,81,0	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	0/0:154,0:154:99:0,464,6431	0/0:172,0:172:99:0,518,7183	0/0:161,0:161:99:0,485,6723	0/0:187,0:187:99:0,563,7809	0/0:165,0:165:99:0,497,6890	0/0:190,0:190:99:0,572,7934	0/0:178,0:178:99:0,536,7433	0/0:144,0:144:99:0,433,6013	0/0:133,0:133:99:0,400,5554	0/0:102,0:102:99:0,307,4260	0/0:220,0:220:99:0,662,9187
gi|293339394|gb|GU595196.1|	95608	.	G	A	17163.52	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.830;DP=3191;Dels=0.00;FS=39.478;HRun=0;HaplotypeScore=1.2855;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.959;QD=41.76;ReadPosRankSum=-0.941;SB=-6973.99	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:174,0:174:99:0,524,7266	1/1:0,138:138:99:5763,415,0	1/1:0,171:171:99:7141,515,0	0/0:83,0:83:99:0,250,3466	0/0:114,0:114:99:0,343,4761	0/0:184,0:184:99:0,554,7684	0/0:30,0:30:90.30:0,90,1253	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:172,0:172:99:0,518,7183	0/0:162,0:162:99:0,488,6765	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:186,0:186:99:0,560,7767	0/0:175,0:175:99:0,527,7308	0/0:142,0:142:99:0,427,5930	0/0:126,0:126:99:0,379,5262	1/1:0,102:102:99:4260,307,0	0/0:217,0:217:99:0,653,9062
gi|293339394|gb|GU595196.1|	95653	.	A	C	3466.13	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.425;DP=3247;Dels=0.00;FS=223.845;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.224;QD=41.76;ReadPosRankSum=-0.126;SB=-41.78	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:153,0:153:99:0,461,6389	0/0:118,0:118:99:0,355,4928	0/0:184,0:184:99:0,554,7684	0/0:93,0:93:99:0,280,3884	0/0:123,0:123:99:0,370,5137	0/0:176,0:176:99:0,530,7350	1/1:0,83:83:99:3466,250,0	0/0:142,0:142:99:0,427,5930	0/0:183,0:183:99:0,551,7642	0/0:179,0:179:99:0,539,7475	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:172,0:172:99:0,518,7183	0/0:153,0:153:99:0,461,6389	0/0:167,0:167:99:0,503,6974	0/0:156,0:156:99:0,470,6515	0/0:91,0:91:99:0,274,3800	0/0:225,0:225:99:0,677,9396
gi|293339394|gb|GU595196.1|	95708	.	A	G	3674.93	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-2.133;DP=3321;Dels=0.00;FS=151.359;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.052;QD=41.76;ReadPosRankSum=-0.681;SB=-292.34	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:184,0:184:99:0,554,7684	0/0:127,0:127:99:0,382,5304	0/0:172,0:172:99:0,518,7183	0/0:110,0:110:99:0,331,4594	0/0:134,0:134:99:0,403,5596	0/0:180,0:180:99:0,542,7517	1/1:0,88:88:99:3675,265,0	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:192,0:192:99:0,578,8018	0/0:156,0:156:99:0,470,6515	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:153,0:153:99:0,461,6389	0/0:151,0:151:99:0,455,6306	0/0:168,0:168:99:0,506,7016	0/0:94,0:94:99:0,283,3925	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	95744	.	T	C	4593.66	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.920;DP=3396;Dels=0.00;FS=77.946;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.167;QD=41.76;ReadPosRankSum=-1.206;SB=-1044.03	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:189,0:189:99:0,569,7893	0/0:143,0:143:99:0,430,5972	0/0:210,0:210:99:0,632,8770	0/0:99,0:99:99:0,298,4134	0/0:137,0:137:99:0,412,5721	0/0:166,0:166:99:0,500,6932	1/1:0,110:110:99:4594,331,0	0/0:160,0:160:99:0,482,6682	0/0:192,0:192:99:0,578,8018	0/0:164,0:164:99:0,494,6849	0/0:177,0:177:99:0,533,7392	0/0:155,0:155:99:0,467,6473	0/0:198,0:198:99:0,596,8269	0/0:161,0:161:99:0,485,6723	0/0:185,0:185:99:0,557,7726	0/0:149,0:149:99:0,448,6222	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:90,0:90:99:0,271,3758	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	95770	.	T	C	4677.18	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.756;DP=3314;Dels=0.00;FS=43.436;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.379;QD=41.76;ReadPosRankSum=-1.042;SB=-1378.11	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:190,0:190:99:0,572,7934	0/0:151,0:151:99:0,455,6306	0/0:180,0:180:99:0,542,7517	0/0:97,0:97:99:0,292,4051	0/0:140,0:140:99:0,421,5846	0/0:189,0:189:99:0,569,7893	1/1:0,112:112:99:4677,337,0	0/0:154,0:154:99:0,464,6431	0/0:179,0:179:99:0,539,7475	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	0/0:149,0:149:99:0,448,6222	0/0:192,0:192:99:0,578,8018	0/0:152,0:152:99:0,458,6348	0/0:184,0:184:99:0,554,7684	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	0/0:135,0:135:99:0,406,5638	0/0:93,0:93:99:0,280,3884	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	95801	.	G	A	5804.71	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.883;DP=3318;Dels=0.00;FS=20.327;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.611;QD=41.76;ReadPosRankSum=-1.293;SB=-2213.32	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:160,0:160:99:0,482,6682	0/0:124,0:124:99:0,373,5178	0/0:143,0:143:99:0,430,5972	0/0:94,0:94:99:0,283,3925	0/0:136,0:136:99:0,409,5679	0/0:212,0:212:99:0,638,8853	1/1:0,139:139:99:5805,418,0	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:150,0:150:99:0,452,6264	0/0:146,0:146:99:0,439,6097	0/0:188,0:188:99:0,566,7851	0/0:193,0:193:99:0,581,8060	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:104,0:104:99:0,313,4343	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	95857	.	T	A	6389.35	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.445;DP=3335;Dels=0.00;FS=7.973;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.132;QD=41.76;ReadPosRankSum=-0.568;SB=-2923.24	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:136,0:136:99:0,409,5679	0/0:179,0:179:99:0,539,7475	0/0:91,0:91:99:0,274,3800	0/0:116,0:116:99:0,349,4844	0/0:172,0:172:99:0,518,7183	1/1:0,153:153:99:6389,461,0	0/0:159,0:159:99:0,479,6640	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:140,0:140:99:0,421,5846	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	0/0:91,0:91:99:0,274,3800	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	95913	.	G	A	6723.43	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.637;DP=3311;Dels=0.00;FS=5.325;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.666;QD=41.76;ReadPosRankSum=0.002;SB=-3173.80	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:164,0:164:99:0,494,6849	0/0:122,0:122:99:0,367,5095	0/0:168,0:168:99:0,506,7016	0/0:110,0:110:99:0,331,4594	0/0:111,0:111:99:0,334,4635	0/0:181,0:181:99:0,545,7559	1/1:0,161:161:99:6723,485,0	0/0:159,0:159:99:0,479,6640	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	0/0:177,0:177:99:0,533,7392	0/0:174,0:174:99:0,524,7266	0/0:178,0:178:99:0,536,7433	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:76,0:76:99:0,229,3174	0/0:188,0:188:99:0,566,7851
gi|293339394|gb|GU595196.1|	95982	.	G	T	3758.45	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.596;DP=3245;Dels=0.00;FS=8.723;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.332;QD=41.76;ReadPosRankSum=0.622;SB=-1586.91	GT:AD:DP:GQ:PL	0/0:196,0:196:99:0,590,8185	0/0:184,0:184:99:0,554,7684	0/0:123,0:123:99:0,370,5137	0/0:167,0:167:99:0,503,6974	0/0:88,0:88:99:0,265,3675	0/0:114,0:114:99:0,343,4761	0/0:151,0:151:99:0,455,6306	1/1:0,90:90:99:3758,271,0	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	0/0:152,0:152:99:0,458,6348	0/0:155,0:155:99:0,467,6473	0/0:169,0:169:99:0,509,7057	0/0:180,0:180:99:0,542,7517	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:155,0:155:99:0,467,6473	0/0:172,0:172:99:0,518,7183	0/0:177,0:177:99:0,533,7392	0/0:85,0:85:99:0,256,3550	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	96000	.	C	A	4844.22	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.116;DP=3318;Dels=0.00;FS=16.311;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.471;QD=41.76;ReadPosRankSum=-6.723;SB=-1879.23	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:177,0:177:99:0,533,7392	0/0:117,0:117:99:0,352,4886	0/0:166,0:166:99:0,500,6932	0/0:95,0:95:99:0,286,3967	0/0:135,0:135:99:0,406,5638	0/0:170,0:170:99:0,512,7099	1/1:0,116:116:99:4844,349,0	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:148,0:148:99:0,445,6181	0/0:161,0:161:99:0,485,6723	0/0:170,0:170:99:0,512,7099	0/0:181,0:181:99:0,545,7559	0/0:179,0:179:99:0,539,7475	0/0:185,0:185:99:0,557,7726	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:89,0:89:99:0,268,3717	0/0:206,0:206:99:0,620,8603
gi|293339394|gb|GU595196.1|	96011	.	T	C	5094.78	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.205;DP=3295;Dels=0.00;FS=10.961;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.950;QD=41.76;ReadPosRankSum=3.759;SB=-2129.80	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:174,0:174:99:0,524,7266	0/0:122,0:122:99:0,367,5095	0/0:160,0:160:99:0,482,6682	0/0:89,0:89:99:0,268,3717	0/0:136,0:136:99:0,409,5679	0/0:179,0:179:99:0,539,7475	1/1:0,122:122:99:5095,367,0	0/0:155,0:155:99:0,467,6473	0/0:182,0:182:99:0,548,7600	0/0:151,0:151:99:0,455,6306	0/0:167,0:167:99:0,503,6974	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:154,0:154:99:0,464,6431	0/0:174,0:174:99:0,524,7266	0/0:183,0:183:99:0,551,7642	0/0:91,0:91:99:0,274,3800	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	96195	.	C	G	5345.34	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.037;DP=3367;Dels=0.00;FS=0.669;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.418;QD=41.76;ReadPosRankSum=2.149;SB=-2630.92	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:188,0:188:99:0,566,7851	0/0:128,0:128:99:0,385,5345	0/0:164,0:164:99:0,494,6849	0/0:86,0:86:99:0,259,3591	0/0:118,0:118:99:0,355,4928	0/0:176,0:176:99:0,530,7350	1/1:0,128:128:99:5345,385,0	0/0:150,0:150:99:0,452,6264	0/0:191,0:191:99:0,575,7976	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	0/0:172,0:172:99:0,518,7183	0/0:187,0:187:99:0,563,7809	0/0:182,0:182:99:0,548,7600	0/0:169,0:169:99:0,509,7057	0/0:83,0:83:99:0,250,3466	0/0:202,0:202:99:0,608,8436
gi|293339394|gb|GU595196.1|	96232	.	T	C	5888.23	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.246;DP=3289;Dels=0.00;FS=1.759;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.964;QD=41.76;ReadPosRankSum=0.710;SB=-2881.48	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:138,0:138:99:0,415,5763	0/0:145,0:145:99:0,436,6055	0/0:101,0:101:99:0,304,4218	0/0:116,0:116:99:0,349,4844	0/0:179,0:179:99:0,539,7475	1/1:0,141:141:99:5888,424,0	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:157,0:157:99:0,473,6556	0/0:178,0:178:99:0,536,7433	0/0:191,0:191:99:0,575,7976	0/0:171,0:171:99:0,515,7141	0/0:154,0:154:99:0,464,6431	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	0/0:147,0:147:99:0,442,6139	0/0:73,0:73:99:0,220,3049	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	96238	.	C	T	5721.18	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.492;DP=3236;Dels=0.00;FS=0.312;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.019;QD=41.76;ReadPosRankSum=3.159;SB=-2797.96	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:162,0:162:99:0,488,6765	0/0:135,0:135:99:0,406,5638	0/0:146,0:146:99:0,439,6097	0/0:96,0:96:99:0,289,4009	0/0:118,0:118:99:0,355,4928	0/0:172,0:172:99:0,518,7183	1/1:0,137:137:99:5721,412,0	0/0:164,0:164:99:0,494,6849	0/0:157,0:157:99:0,473,6556	0/0:155,0:155:99:0,467,6473	0/0:177,0:177:99:0,533,7392	0/0:191,0:191:99:0,575,7976	0/0:164,0:164:99:0,494,6849	0/0:154,0:154:99:0,464,6431	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:140,0:140:99:0,421,5846	0/0:72,0:72:99:0,217,3007	0/0:213,0:213:99:0,641,8895
gi|293339394|gb|GU595196.1|	96453	.	G	T	8560.89	.	AC=2;AF=0.048;AN=42;BaseQRankSum=2.109;DP=3354;Dels=0.00;FS=12.162;HRun=1;HaplotypeScore=6.9038;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.695;QD=41.76;ReadPosRankSum=-0.749;SB=-3758.45	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:131,0:131:99:0,394,5471	0/0:180,0:180:99:0,542,7517	0/0:77,0:77:99:0,232,3216	0/0:121,0:121:99:0,364,5053	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:149,0:149:99:0,448,6222	0/0:197,0:197:99:0,593,8227	0/0:173,0:173:99:0,521,7225	0/0:148,0:148:99:0,445,6181	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	0/0:187,0:187:99:0,563,7809	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:86,0:86:99:0,259,3591	1/1:0,205:205:99:8561,617,0
gi|293339394|gb|GU595196.1|	96459	.	C	T	6890.47	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.402;DP=3350;Dels=0.00;FS=0.911;HRun=0;HaplotypeScore=14.5695;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.877;QD=41.76;ReadPosRankSum=-0.024;SB=-3424.37	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:135,0:135:99:0,406,5638	0/0:178,0:178:99:0,536,7433	0/0:82,0:82:99:0,247,3424	0/0:120,0:120:99:0,361,5011	0/0:177,0:177:99:0,533,7392	1/1:0,165:165:99:6890,497,0	0/0:174,0:174:99:0,524,7266	0/0:180,0:180:99:0,542,7517	0/0:139,0:139:99:0,418,5805	0/0:189,0:189:99:0,569,7893	0/0:176,0:176:99:0,530,7350	0/0:147,0:147:99:0,442,6139	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:193,0:193:99:0,581,8060	0/0:170,0:170:99:0,512,7099	0/0:182,0:182:99:0,548,7600	0/0:83,0:83:99:0,250,3466	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	96468	.	G	A	7976.24	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.076;DP=3381;Dels=0.00;FS=2.204;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.691;QD=41.76;ReadPosRankSum=-2.389;SB=-3716.69	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:167,0:167:99:0,503,6974	0/0:143,0:143:99:0,430,5972	0/0:175,0:175:99:0,527,7308	0/0:82,0:82:99:0,247,3424	0/0:118,0:118:99:0,355,4928	0/0:167,0:167:99:0,503,6974	1/1:0,191:191:99:7976,575,0	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:129,0:129:99:0,388,5387	0/0:197,0:197:99:0,593,8227	0/0:183,0:183:99:0,551,7642	0/0:157,0:157:99:0,473,6556	0/0:164,0:164:99:0,494,6849	0/0:174,0:174:99:0,524,7266	0/0:189,0:189:99:0,569,7893	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:85,0:85:99:0,256,3550	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	96531	.	G	T	17748.16	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.861;DP=3348;Dels=0.00;FS=0.995;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.632;QD=41.76;ReadPosRankSum=-0.588;SB=-8811.45	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	1/1:0,129:129:99:5387,388,0	1/1:0,177:177:99:7392,533,0	0/0:80,0:80:99:0,241,3341	0/0:104,0:104:99:0,313,4343	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:185,0:185:99:0,557,7726	0/0:174,0:174:99:0,524,7266	0/0:181,0:181:99:0,545,7559	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:151,0:151:99:0,455,6306	0/0:168,0:168:99:0,506,7016	1/1:0,119:119:99:4969,358,0	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	96546	.	G	T	6806.95	.	AC=2;AF=0.048;AN=42;BaseQRankSum=2.967;DP=3436;Dels=0.00;FS=16.119;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.655;QD=41.76;ReadPosRankSum=0.669;SB=-2714.44	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:120,0:120:99:0,361,5011	0/0:187,0:187:99:0,563,7809	0/0:88,0:88:99:0,265,3675	0/0:110,0:110:99:0,331,4594	0/0:199,0:199:99:0,599,8310	1/1:0,163:163:99:6807,491,0	0/0:171,0:171:99:0,515,7141	0/0:183,0:183:99:0,551,7642	0/0:167,0:167:99:0,503,6974	0/0:200,0:200:99:0,602,8352	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:116,0:116:99:0,349,4844	0/0:203,0:203:99:0,611,8477
gi|293339394|gb|GU595196.1|	96690	.	T	G	3507.89	.	AC=2;AF=0.048;AN=42;BaseQRankSum=2.244;DP=3229;Dels=0.00;FS=7.336;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.244;QD=41.76;ReadPosRankSum=0.377;SB=-1419.87	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:115,0:115:99:0,346,4802	0/0:152,0:152:99:0,458,6348	0/0:80,0:80:99:0,241,3341	0/0:88,0:88:99:0,265,3675	0/0:139,0:139:99:0,418,5805	0/0:174,0:174:99:0,524,7266	0/0:184,0:184:99:0,554,7684	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:189,0:189:99:0,569,7893	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:131,0:131:99:0,394,5471	0/0:163,0:163:99:0,491,6807	1/1:0,84:84:99:3508,253,0	0/0:212,0:212:99:0,638,8853
gi|293339394|gb|GU595196.1|	96739	.	A	G	7391.60	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.027;DP=3310;Dels=0.00;FS=11.984;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.970;QD=41.76;ReadPosRankSum=0.392;SB=-2965.00	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:162,0:162:99:0,488,6765	0/0:97,0:97:99:0,292,4051	0/0:150,0:150:99:0,452,6264	0/0:99,0:99:99:0,298,4134	0/0:95,0:95:99:0,286,3967	0/0:151,0:151:99:0,455,6306	1/1:0,177:177:99:7392,533,0	0/0:169,0:169:99:0,509,7057	0/0:189,0:189:99:0,569,7893	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:196,0:196:99:0,590,8185	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:165,0:165:99:0,497,6890	0/0:185,0:185:99:0,557,7726	0/0:171,0:171:99:0,515,7141	0/0:83,0:83:99:0,250,3466	0/0:200,0:200:99:0,602,8352
gi|293339394|gb|GU595196.1|	96775	.	C	T	3591.41	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.799;DP=3306;Dels=0.00;FS=13.047;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.010;QD=41.76;ReadPosRankSum=-1.062;SB=-1378.11	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:164,0:164:99:0,494,6849	0/0:95,0:95:99:0,286,3967	0/0:146,0:146:99:0,439,6097	0/0:97,0:97:99:0,292,4051	0/0:102,0:102:99:0,307,4260	0/0:168,0:168:99:0,506,7016	0/0:126,0:126:99:0,379,5262	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:174,0:174:99:0,524,7266	0/0:181,0:181:99:0,545,7559	0/0:179,0:179:99:0,539,7475	0/0:174,0:174:99:0,524,7266	0/0:164,0:164:99:0,494,6849	0/0:192,0:192:99:0,578,8018	0/0:162,0:162:99:0,488,6765	1/1:0,86:86:99:3591,259,0	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	96796	.	C	T	5136.54	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.173;DP=3391;Dels=0.00;FS=18.918;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.293;QD=41.76;ReadPosRankSum=0.829;SB=-1920.99	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:188,0:188:99:0,566,7851	0/0:116,0:116:99:0,349,4844	0/0:156,0:156:99:0,470,6515	0/0:113,0:113:99:0,340,4719	0/0:113,0:113:99:0,340,4719	0/0:177,0:177:99:0,533,7392	1/1:0,123:123:99:5137,370,0	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:190,0:190:99:0,572,7934	0/0:176,0:176:99:0,530,7350	0/0:193,0:193:99:0,581,8060	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	0/0:185,0:185:99:0,557,7726	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:99,0:99:99:0,298,4134	0/0:202,0:202:99:0,608,8436
gi|293339394|gb|GU595196.1|	96814	.	A	T	35913.91	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.095;DP=3451;Dels=0.00;FS=2.353;HRun=1;HaplotypeScore=4.5708;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.275;QD=41.76;ReadPosRankSum=-0.201;SB=-17163.52	GT:AD:DP:GQ:PL	0/0:201,0:201:99:0,605,8394	0/0:187,0:187:99:0,563,7809	0/0:128,0:128:99:0,385,5345	0/0:173,0:173:99:0,521,7225	0/0:100,0:100:99:0,301,4176	0/0:120,0:120:99:0,361,5011	0/0:180,0:180:99:0,542,7517	1/1:0,121:121:99:5053,364,0	0/0:182,0:182:99:0,548,7600	1/1:0,189:189:99:7893,569,0	0/0:170,0:170:99:0,512,7099	1/1:0,190:190:99:7934,572,0	1/1:0,186:186:99:7767,560,0	1/1:0,174:174:99:7266,524,0	0/0:136,0:136:99:0,409,5679	0/0:192,0:192:99:0,578,8018	0/0:177,0:177:99:0,533,7392	0/0:152,0:152:99:0,458,6348	0/0:174,0:174:99:0,524,7266	0/0:101,0:101:99:0,304,4218	0/0:218,0:218:99:0,656,9104
gi|293339394|gb|GU595196.1|	96823	.	G	C	30986.19	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.908;DP=3442;Dels=0.00;FS=1.882;HRun=0;HaplotypeScore=4.5708;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.285;QD=41.76;ReadPosRankSum=-0.547;SB=-15326.06	GT:AD:DP:GQ:PL	0/0:191,0:191:99:0,575,7976	0/0:194,0:194:99:0,584,8102	0/0:140,0:140:99:0,421,5846	0/0:186,0:186:99:0,560,7767	0/0:91,0:91:99:0,274,3800	0/0:111,0:111:99:0,334,4635	0/0:183,0:183:99:0,551,7642	0/0:118,0:118:99:0,355,4928	0/0:178,0:178:99:0,536,7433	1/1:0,200:200:99:8352,602,0	0/0:165,0:165:99:0,497,6890	1/1:0,184:184:99:7684,554,0	1/1:0,181:181:99:7559,545,0	1/1:0,177:177:99:7392,533,0	0/0:141,0:141:99:0,424,5888	0/0:183,0:183:99:0,551,7642	0/0:169,0:169:99:0,509,7057	0/0:153,0:153:99:0,461,6389	0/0:178,0:178:99:0,536,7433	0/0:90,0:90:99:0,271,3758	0/0:229,0:229:99:0,689,9563
gi|293339394|gb|GU595196.1|	96871	.	T	A	6806.95	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.041;DP=3276;Dels=0.00;FS=7.655;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.307;QD=41.76;ReadPosRankSum=0.172;SB=-2923.24	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:128,0:128:99:0,385,5345	0/0:133,0:133:99:0,400,5554	0/0:90,0:90:99:0,271,3758	0/0:110,0:110:99:0,331,4594	0/0:180,0:180:99:0,542,7517	1/1:0,163:163:99:6807,491,0	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:182,0:182:99:0,548,7600	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:150,0:150:99:0,452,6264	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	0/0:72,0:72:99:0,217,3007	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	96917	.	T	A	13739.17	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.003;DP=2814;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=2.9996;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.917;QD=41.76;ReadPosRankSum=-6.727;SB=-6848.68	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:181,0:181:99:0,545,7559	1/1:0,26:26:78.26:1086,78,0	1/1:0,34:34:99:1420,102,0	0/0:87,0:87:99:0,262,3633	1/1:0,29:29:87.29:1211,87,0	1/1:0,34:34:99:1420,102,0	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:154,0:154:99:0,464,6431	0/0:193,0:193:99:0,581,8060	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:161,0:161:99:0,485,6723	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:187,0:187:99:0,563,7809	1/1:0,17:17:51.17:710,51,0	1/1:0,189:189:99:7893,569,0
gi|293339394|gb|GU595196.1|	96923	.	C	T	5637.66	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.231;DP=2828;Dels=0.00;FS=3.182;HRun=0;HaplotypeScore=6.4277;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.587;QD=41.76;ReadPosRankSum=-16.060;SB=-2630.38	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:184,0:184:99:0,554,7684	1/1:0,23:23:69.23:960,69,0	1/1:0,39:39:99:1629,117,0	0/0:96,0:96:99:0,289,4009	1/1:0,17:17:51.17:710,51,0	1/1:0,38:38:99:1587,114,0	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	0/0:149,0:149:99:0,448,6222	0/0:196,0:196:99:0,590,8185	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:178,0:178:99:0,536,7433	1/1:0,18:18:54.18:752,54,0	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	96927	.	A	G	14073.25	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.372;DP=2785;Dels=0.00;FS=2.208;HRun=3;HaplotypeScore=3.4281;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.057;QD=41.76;ReadPosRankSum=-7.762;SB=-6806.90	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:181,0:181:99:0,545,7559	1/1:0,24:24:72.24:1002,72,0	1/1:0,30:30:90.30:1253,90,0	0/0:93,0:93:99:0,280,3884	1/1:0,16:16:48.16:668,48,0	1/1:0,31:31:93.31:1295,93,0	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:151,0:151:99:0,455,6306	0/0:185,0:185:99:0,557,7726	0/0:163,0:163:99:0,491,6807	0/0:178,0:178:99:0,536,7433	0/0:176,0:176:99:0,530,7350	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	1/1:0,27:27:81.27:1128,81,0	1/1:0,209:209:99:8728,629,0
gi|293339394|gb|GU595196.1|	96976	.	G	A	3883.73	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.133;DP=3361;Dels=0.00;FS=6.836;HRun=0;HaplotypeScore=4.4280;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.788;QD=41.76;ReadPosRankSum=-0.223;SB=-1670.43	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:156,0:156:99:0,470,6515	0/0:121,0:121:99:0,364,5053	0/0:184,0:184:99:0,554,7684	0/0:86,0:86:99:0,259,3591	0/0:115,0:115:99:0,346,4802	0/0:178,0:178:99:0,536,7433	1/1:0,93:93:99:3884,280,0	0/0:182,0:182:99:0,548,7600	0/0:174,0:174:99:0,524,7266	0/0:193,0:193:99:0,581,8060	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:197,0:197:99:0,593,8227	0/0:169,0:169:99:0,509,7057	0/0:169,0:169:99:0,509,7057	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	0/0:172,0:172:99:0,518,7183	0/0:99,0:99:99:0,298,4134	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	96980	.	A	T	36874.39	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.058;DP=3318;Dels=0.00;FS=0.579;HRun=0;HaplotypeScore=3.6662;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.915;QD=41.76;ReadPosRankSum=0.113;SB=-18416.33	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:160,0:160:99:0,482,6682	1/1:0,117:117:99:4886,352,0	1/1:0,177:177:99:7392,533,0	0/0:87,0:87:99:0,262,3633	1/1:0,111:111:99:4635,334,0	1/1:0,177:177:99:7392,533,0	0/0:77,0:77:99:0,232,3216	0/0:184,0:184:99:0,554,7684	0/0:167,0:167:99:0,503,6974	0/0:183,0:183:99:0,551,7642	0/0:188,0:188:99:0,566,7851	0/0:162,0:162:99:0,488,6765	0/0:195,0:195:99:0,587,8143	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:155,0:155:99:0,467,6473	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	1/1:0,96:96:99:4009,289,0	1/1:0,205:205:99:8561,617,0
gi|293339394|gb|GU595196.1|	96998	.	G	T	355.60	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.478;DP=3227;Dels=0.00;FS=1.229;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=1.321;QD=35.56;ReadPosRankSum=-4.804;SB=-163.81	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:176,0:176:99:0,530,7350	0/0:111,0:111:99:0,334,4635	0/0:176,0:176:99:0,530,7350	0/0:84,0:84:99:0,253,3508	0/0:110,0:110:99:0,331,4594	0/0:177,0:177:99:0,533,7392	1/1:0,10:10:30.10:418,30,0	0/0:169,0:169:99:0,509,7057	0/0:155,0:155:99:0,467,6473	0/0:199,0:199:99:0,599,8310	0/0:185,0:185:99:0,557,7726	0/0:158,0:158:99:0,476,6598	0/0:192,0:192:99:0,578,8018	0/0:164,0:164:99:0,494,6849	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:76,0:76:99:0,229,3174	0/0:223,0:223:99:0,671,9313
gi|293339394|gb|GU595196.1|	97049	.	A	T	4802.46	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.455;DP=3379;Dels=0.00;FS=14.381;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.635;QD=41.76;ReadPosRankSum=2.935;SB=-1962.75	GT:AD:DP:GQ:PL	0/0:200,0:200:99:0,602,8352	0/0:196,0:196:99:0,590,8185	0/0:117,0:117:99:0,352,4886	0/0:167,0:167:99:0,503,6974	0/0:91,0:91:99:0,274,3800	0/0:95,0:95:99:0,286,3967	0/0:190,0:190:99:0,572,7934	1/1:0,115:115:99:4802,346,0	0/0:159,0:159:99:0,479,6640	0/0:186,0:186:99:0,560,7767	0/0:180,0:180:99:0,542,7517	0/0:184,0:184:99:0,554,7684	0/0:183,0:183:99:0,551,7642	0/0:180,0:180:99:0,542,7517	0/0:168,0:168:99:0,506,7016	0/0:191,0:191:99:0,575,7976	0/0:160,0:160:99:0,482,6682	0/0:167,0:167:99:0,503,6974	0/0:188,0:188:99:0,566,7851	0/0:68,0:68:99:0,205,2840	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	97121	.	A	G	4551.90	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.630;DP=3079;Dels=0.00;FS=10.136;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.246;QD=41.76;ReadPosRankSum=3.267;SB=-2004.51	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:90,0:90:99:0,271,3758	0/0:150,0:150:99:0,452,6264	0/0:87,0:87:99:0,262,3633	0/0:94,0:94:99:0,283,3925	0/0:154,0:154:99:0,464,6431	1/1:0,109:109:99:4552,328,0	0/0:158,0:158:99:0,476,6598	0/0:190,0:190:99:0,572,7934	0/0:149,0:149:99:0,448,6222	0/0:142,0:142:99:0,427,5930	0/0:149,0:149:99:0,448,6222	0/0:158,0:158:99:0,476,6598	0/0:178,0:178:99:0,536,7433	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:72,0:72:99:0,217,3007	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	97142	.	G	A	16537.11	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.200;DP=3084;Dels=0.00;FS=6.266;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.888;QD=41.76;ReadPosRankSum=-3.276;SB=-7642.16	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	1/1:0,93:93:99:3884,280,0	1/1:0,143:143:99:5972,430,0	0/0:102,0:102:99:0,307,4260	0/0:101,0:101:99:0,304,4218	0/0:150,0:150:99:0,452,6264	1/1:0,95:95:99:3967,286,0	0/0:147,0:147:99:0,442,6139	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:152,0:152:99:0,458,6348	0/0:158,0:158:99:0,476,6598	0/0:169,0:169:99:0,509,7057	0/0:186,0:186:99:0,560,7767	0/0:164,0:164:99:0,494,6849	0/0:149,0:149:99:0,448,6222	0/0:160,0:160:99:0,482,6682	0/0:157,0:157:99:0,473,6556	1/1:0,65:65:99:2714,196,0	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	97160	.	G	A	3299.09	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.800;DP=3114;Dels=0.00;FS=1.345;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.356;QD=41.76;ReadPosRankSum=1.619;SB=-1586.91	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:183,0:183:99:0,551,7642	0/0:91,0:91:99:0,274,3800	0/0:150,0:150:99:0,452,6264	0/0:100,0:100:99:0,301,4176	0/0:95,0:95:99:0,286,3967	0/0:155,0:155:99:0,467,6473	1/1:0,79:79:99:3299,238,0	0/0:146,0:146:99:0,439,6097	0/0:180,0:180:99:0,542,7517	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	0/0:64,0:64:99:0,193,2673	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	97193	.	C	T	2735.60	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.028;DP=3137;Dels=0.00;FS=2.060;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.278;QD=40.83;ReadPosRankSum=1.490;SB=-1294.59	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:106,0:106:99:0,319,4427	0/0:171,0:171:99:0,515,7141	0/0:98,0:98:99:0,295,4093	0/0:92,0:92:99:0,277,3842	0/0:149,0:149:99:0,448,6222	1/1:0,67:67:99:2798,202,0	0/0:160,0:160:99:0,482,6682	0/0:183,0:183:99:0,551,7642	0/0:172,0:172:99:0,518,7183	0/0:188,0:188:99:0,566,7851	0/0:150,0:150:99:0,452,6264	0/0:187,0:187:99:0,563,7809	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	0/0:147,0:147:99:0,442,6139	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:62,0:62:99:0,187,2589	0/0:194,0:194:99:0,584,8102
gi|293339394|gb|GU595196.1|	97223	.	C	T	2610.32	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.468;DP=3191;Dels=0.00;FS=61.280;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.107;QD=40.79;ReadPosRankSum=0.231;SB=-501.14	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:166,0:166:99:0,500,6932	0/0:112,0:112:99:0,337,4677	0/0:158,0:158:99:0,476,6598	0/0:88,0:88:99:0,265,3675	0/0:106,0:106:99:0,319,4427	0/0:158,0:158:99:0,476,6598	1/1:0,64:64:99:2673,193,0	0/0:145,0:145:99:0,436,6055	0/0:179,0:179:99:0,539,7475	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:199,0:199:99:0,599,8310	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:180,0:180:99:0,542,7517	0/0:174,0:174:99:0,524,7266	0/0:78,0:78:99:0,235,3257	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	97232	.	G	T	2401.52	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.177;DP=3209;Dels=0.00;FS=69.544;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.565;QD=40.70;ReadPosRankSum=3.052;SB=-375.86	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:169,0:169:99:0,509,7057	0/0:118,0:118:99:0,355,4928	0/0:165,0:165:99:0,497,6890	0/0:81,0:81:99:0,244,3383	0/0:111,0:111:99:0,334,4635	0/0:166,0:166:99:0,500,6932	1/1:0,59:59:99:2464,178,0	0/0:143,0:143:99:0,430,5972	0/0:181,0:181:99:0,545,7559	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:207,0:207:99:0,623,8644	0/0:177,0:177:99:0,533,7392	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:73,0:73:99:0,220,3049	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	97277	.	C	G	814.63	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.151;DP=3206;Dels=0.00;FS=46.541;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.290;QD=38.79;ReadPosRankSum=-0.796;SB=-41.78	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:178,0:178:99:0,536,7433	0/0:117,0:117:99:0,352,4886	0/0:160,0:160:99:0,482,6682	0/0:87,0:87:99:0,262,3633	0/0:109,0:109:99:0,328,4552	0/0:179,0:179:99:0,539,7475	1/1:0,21:21:63.21:877,63,0	0/0:193,0:193:99:0,581,8060	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:185,0:185:99:0,557,7726	0/0:155,0:155:99:0,467,6473	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	0/0:186,0:186:99:0,560,7767	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	0/0:65,0:65:99:0,196,2714	0/0:205,0:205:99:0,617,8561
gi|293339394|gb|GU595196.1|	97295	.	G	A,C	14950.22	.	AC=6,2;AF=0.143,0.048;AN=42;BaseQRankSum=-0.021;DP=3097;Dels=0.00;FS=23.536;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.067;QD=41.76;ReadPosRankSum=0.765;SB=-5537.95	GT:AD:DP:GQ:PL	0/0:196,0,0:196:99:0,590,8185,590,8185,8185	0/0:180,0,0:180:99:0,542,7517,542,7517,7517	1/1:0,113,0:113:99:4719,340,0,4719,340,4719	1/1:0,150,0:150:99:6264,452,0,6264,452,6264	0/0:87,0,0:87:99:0,262,3633,262,3633,3633	0/0:108,0,0:108:99:0,325,4510,325,4510,4510	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	2/2:0,0,24:24:72.24:1002,1002,1002,72,72,0	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	0/0:179,0,0:179:99:0,539,7475,539,7475,7475	0/0:141,0,0:141:99:0,424,5888,424,5888,5888	0/0:162,0,0:162:99:0,488,6765,488,6765,6765	0/0:160,0,0:160:99:0,482,6682,482,6682,6682	0/0:161,0,0:161:99:0,485,6723,485,6723,6723	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:146,0,0:146:99:0,439,6097,439,6097,6097	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	1/1:0,71,0:71:99:2965,214,0,2965,214,2965	0/0:204,0,0:204:99:0,614,8519,614,8519,8519
gi|293339394|gb|GU595196.1|	97301	.	T	C	1023.43	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.730;DP=3067;Dels=0.00;FS=72.579;HRun=1;HaplotypeScore=2.1426;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.001;QD=39.36;ReadPosRankSum=0.430;SB=-0.02	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:176,0:176:99:0,530,7350	0/0:107,0:107:99:0,322,4468	0/0:150,0:150:99:0,452,6264	0/0:90,0:90:99:0,271,3758	0/0:103,0:103:99:0,310,4301	0/0:175,0:175:99:0,527,7308	1/1:0,26:26:78.26:1086,78,0	0/0:147,0:147:99:0,442,6139	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	0/0:146,0:146:99:0,439,6097	0/0:166,0:166:99:0,500,6932	0/0:153,0:153:99:0,461,6389	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:143,0:143:99:0,430,5972	0/0:165,0:165:99:0,497,6890	0/0:76,0:76:99:0,229,3174	0/0:200,0:200:99:0,602,8352
gi|293339394|gb|GU595196.1|	97340	.	A	G	22341.80	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.115;DP=3075;Dels=0.00;FS=56.489;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.834;QD=41.76;ReadPosRankSum=-0.383;SB=-8352.09	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	1/1:0,78:78:99:3257,235,0	1/1:0,136:136:99:5679,409,0	0/0:102,0:102:99:0,307,4260	0/0:110,0:110:99:0,331,4594	0/0:175,0:175:99:0,527,7308	1/1:0,60:60:99:2506,181,0	0/0:160,0:160:99:0,482,6682	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:153,0:153:99:0,461,6389	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:153,0:153:99:0,461,6389	0/0:155,0:155:99:0,467,6473	1/1:0,51:51:99:2130,154,0	1/1:0,210:210:99:8770,632,0
gi|293339394|gb|GU595196.1|	97364	.	A	G	2902.64	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.757;DP=3136;Dels=0.00;FS=204.415;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.639;QD=40.88;ReadPosRankSum=2.552;SB=-0.02	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:102,0:102:99:0,307,4260	0/0:138,0:138:99:0,415,5763	0/0:88,0:88:99:0,265,3675	0/0:121,0:121:99:0,364,5053	0/0:182,0:182:99:0,548,7600	1/1:0,71:71:99:2965,214,0	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	0/0:156,0:156:99:0,470,6515	0/0:166,0:166:99:0,500,6932	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	0/0:149,0:149:99:0,448,6222	0/0:149,0:149:99:0,448,6222	0/0:57,0:57:99:0,172,2380	0/0:209,0:209:99:0,629,8728
gi|293339394|gb|GU595196.1|	97508	.	C	A	3070.18	.	AC=6;AF=0.150;AN=40;BaseQRankSum=0.612;DP=2867;Dels=0.00;FS=2.505;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.013;QD=40.40;ReadPosRankSum=-8.303;SB=-1461.62	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	1/1:0,26:26:78.26:1086,78,0	1/1:0,31:31:93.31:1295,93,0	0/0:100,0:100:99:0,301,4176	0/0:99,0:99:99:0,298,4134	0/0:168,0:168:99:0,506,7016	./.	0/0:158,0:158:99:0,476,6598	0/0:154,0:154:99:0,464,6431	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:189,0:189:99:0,569,7893	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	1/1:0,19:19:57.19:793,57,0	0/0:214,0:214:99:0,644,8937
gi|293339394|gb|GU595196.1|	97517	.	G	A	447	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.078;DP=2818;Dels=0.00;FS=0.000;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=0.9704;MQ=254.00;MQ0=0;MQRankSum=0.908;QD=34.38;ReadPosRankSum=-5.658;SB=-227.88	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:157,0:157:99:0,473,6556	1/1:0,4:4:12.04:167,12,0	1/1:0,5:5:15.05:209,15,0	0/0:97,0:97:99:0,292,4051	0/0:105,0:105:99:0,316,4385	0/0:176,0:176:99:0,530,7350	./.	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:187,0:187:99:0,563,7809	0/0:174,0:174:99:0,524,7266	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	1/1:0,4:4:12.04:167,12,0	0/0:215,0:215:99:0,647,8978
gi|293339394|gb|GU595196.1|	97520	.	C	A	451.86	.	AC=6;AF=0.150;AN=40;BaseQRankSum=1.428;DP=2776;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9178;MQ=254.00;MQ0=0;MQRankSum=-1.377;QD=34.76;ReadPosRankSum=-6.090;SB=-242.98	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	1/1:0,4:4:12.04:167,12,0	1/1:0,8:8:24.08:334,24,0	0/0:93,0:93:99:0,280,3884	0/0:100,0:100:99:0,301,4176	0/0:175,0:175:99:0,527,7308	./.	0/0:164,0:164:99:0,494,6849	0/0:164,0:164:99:0,494,6849	0/0:179,0:179:99:0,539,7475	0/0:181,0:181:99:0,545,7559	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	1/1:0,1:1:3.01:42,3,0	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	97521	.	T	C	576.85	.	AC=6;AF=0.150;AN=40;BaseQRankSum=1.594;DP=2789;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9186;MQ=254.00;MQ0=0;MQRankSum=2.184;QD=36.05;ReadPosRankSum=-6.248;SB=-317.26	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	1/1:0,4:4:12.04:167,12,0	1/1:0,11:11:33.11:459,33,0	0/0:93,0:93:99:0,280,3884	0/0:100,0:100:99:0,301,4176	0/0:176,0:176:99:0,530,7350	./.	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:182,0:182:99:0,548,7600	0/0:186,0:186:99:0,560,7767	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	0/0:163,0:163:99:0,491,6807	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	1/1:0,1:1:3.01:42,3,0	0/0:210,0:210:99:0,632,8770
gi|293339394|gb|GU595196.1|	97543	.	A	G	7976.24	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.212;DP=2894;Dels=0.00;FS=6.926;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.560;QD=41.76;ReadPosRankSum=1.026;SB=-3674.93	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:169,0:169:99:0,509,7057	0/0:58,0:58:99:0,175,2422	0/0:85,0:85:99:0,256,3550	0/0:86,0:86:99:0,259,3591	0/0:110,0:110:99:0,331,4594	0/0:182,0:182:99:0,548,7600	./.	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:166,0:166:99:0,500,6932	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:35,0:35:99:0,105,1462	1/1:0,191:191:99:7976,575,0
gi|293339394|gb|GU595196.1|	97670	.	C	T	7516.88	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.581;DP=3129;Dels=0.00;FS=8.403;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.306;QD=41.76;ReadPosRankSum=-1.104;SB=-3382.61	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:153,0:153:99:0,461,6389	1/1:0,107:107:99:4468,322,0	0/0:140,0:140:99:0,421,5846	0/0:107,0:107:99:0,322,4468	0/0:95,0:95:99:0,286,3967	0/0:195,0:195:99:0,587,8143	./.	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:189,0:189:99:0,569,7893	0/0:195,0:195:99:0,587,8143	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	0/0:157,0:157:99:0,473,6556	0/0:160,0:160:99:0,482,6682	1/1:0,73:73:99:3049,220,0	0/0:195,0:195:99:0,587,8143
gi|293339394|gb|GU595196.1|	97753	.	T	A	4969.50	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.452;DP=2936;Dels=0.00;FS=41.255;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.329;QD=41.76;ReadPosRankSum=-0.006;SB=-1545.15	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:155,0:155:99:0,467,6473	1/1:0,65:65:99:2714,196,0	0/0:98,0:98:99:0,295,4093	0/0:81,0:81:99:0,244,3383	0/0:108,0:108:99:0,325,4510	0/0:172,0:172:99:0,518,7183	./.	0/0:154,0:154:99:0,464,6431	0/0:188,0:188:99:0,566,7851	0/0:182,0:182:99:0,548,7600	0/0:187,0:187:99:0,563,7809	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:148,0:148:99:0,445,6181	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:154,0:154:99:0,464,6431	0/0:176,0:176:99:0,530,7350	1/1:0,54:54:99:2255,163,0	0/0:170,0:170:99:0,512,7099
gi|293339394|gb|GU595196.1|	97799	.	A	G	5053.02	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.841;DP=2914;Dels=0.00;FS=123.138;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.010;QD=41.76;ReadPosRankSum=-0.652;SB=-793.47	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	1/1:0,78:78:99:3257,235,0	0/0:105,0:105:99:0,316,4385	0/0:94,0:94:99:0,283,3925	0/0:100,0:100:99:0,301,4176	0/0:183,0:183:99:0,551,7642	./.	0/0:198,0:198:99:0,596,8269	0/0:157,0:157:99:0,473,6556	0/0:169,0:169:99:0,509,7057	0/0:197,0:197:99:0,593,8227	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:156,0:156:99:0,470,6515	0/0:142,0:142:99:0,427,5930	0/0:160,0:160:99:0,482,6682	1/1:0,43:43:99:1796,129,0	0/0:132,0:132:99:0,397,5512
gi|293339394|gb|GU595196.1|	97888	.	T	A	12361.08	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.741;DP=2878;Dels=0.00;FS=361.254;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.076;QD=41.76;ReadPosRankSum=4.850;SB=-1628.67	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:187,0:187:99:0,563,7809	1/1:0,67:67:99:2798,202,0	1/1:0,80:80:99:3341,241,0	0/0:96,0:96:99:0,289,4009	0/0:96,0:96:99:0,289,4009	0/0:175,0:175:99:0,527,7308	./.	0/0:170,0:170:99:0,512,7099	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:194,0:194:99:0,584,8102	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:152,0:152:99:0,458,6348	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	1/1:0,46:46:99:1921,138,0	1/1:0,103:103:99:4301,310,0
gi|293339394|gb|GU595196.1|	97914	.	C	T	11567.63	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.309;DP=2848;Dels=0.00;FS=378.558;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.076;QD=41.76;ReadPosRankSum=-2.671;SB=-1461.63	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	1/1:0,56:56:99:2339,169,0	1/1:0,81:81:99:3383,244,0	0/0:91,0:91:99:0,274,3800	0/0:96,0:96:99:0,289,4009	0/0:165,0:165:99:0,497,6890	./.	0/0:175,0:175:99:0,527,7308	0/0:157,0:157:99:0,473,6556	0/0:141,0:141:99:0,424,5888	0/0:162,0:162:99:0,488,6765	0/0:191,0:191:99:0,575,7976	0/0:172,0:172:99:0,518,7183	0/0:165,0:165:99:0,497,6890	0/0:194,0:194:99:0,584,8102	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	1/1:0,37:37:99:1545,111,0	1/1:0,103:103:99:4301,310,0
gi|293339394|gb|GU595196.1|	97928	.	T	C	10314.82	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-1.939;DP=2797;Dels=0.00;FS=349.201;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.075;QD=41.76;ReadPosRankSum=5.198;SB=-1252.83	GT:AD:DP:GQ:PL	0/0:192,0:192:99:0,578,8018	0/0:161,0:161:99:0,485,6723	1/1:0,40:40:99:1670,120,0	1/1:0,84:84:99:3508,253,0	0/0:81,0:81:99:0,244,3383	0/0:92,0:92:99:0,277,3842	0/0:163,0:163:99:0,491,6807	./.	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	0/0:143,0:143:99:0,430,5972	0/0:182,0:182:99:0,548,7600	0/0:182,0:182:99:0,548,7600	0/0:177,0:177:99:0,533,7392	0/0:174,0:174:99:0,524,7266	0/0:183,0:183:99:0,551,7642	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	1/1:0,32:32:96.32:1336,96,0	1/1:0,91:91:99:3800,274,0
gi|293339394|gb|GU595196.1|	97959	.	C	T	833.22	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-3.009;DP=2757;Dels=0.00;FS=48.592;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=-1.273;QD=37.87;ReadPosRankSum=-2.933;SB=-41.73	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	1/1:0,11:11:33.11:459,33,0	0/0:77,0:77:99:0,232,3216	0/0:79,0:79:99:0,238,3299	0/0:86,0:86:99:0,259,3591	0/0:179,0:179:99:0,539,7475	./.	0/0:181,0:181:99:0,545,7559	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:197,0:197:99:0,593,8227	0/0:180,0:180:99:0,542,7517	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	1/1:0,11:11:33.11:459,33,0	0/0:73,0:73:99:0,220,3049
gi|293339394|gb|GU595196.1|	97971	.	T	C	4259.57	.	AC=6;AF=0.158;AN=38;BaseQRankSum=0.091;DP=2701;Dels=0.00;FS=110.121;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9985;MQ=254.00;MQ0=0;MQRankSum=0.739;QD=41.76;ReadPosRankSum=-1.560;SB=-650.14	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	./.	1/1:0,48:48:99:2004,144,0	0/0:88,0:88:99:0,265,3675	0/0:84,0:84:99:0,253,3508	0/0:189,0:189:99:0,569,7893	1/1:0,7:7:21.07:292,21,0	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:183,0:183:99:0,551,7642	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:190,0:190:99:0,572,7934	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	./.	1/1:0,47:47:99:1963,141,0
gi|293339394|gb|GU595196.1|	97977	.	C	T	3716.69	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.894;DP=2689;Dels=0.00;FS=31.305;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.291;QD=41.76;ReadPosRankSum=-5.582;SB=-1109.08	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:172,0:172:99:0,518,7183	./.	1/1:0,34:34:99:1420,102,0	0/0:88,0:88:99:0,265,3675	0/0:90,0:90:99:0,271,3758	0/0:194,0:194:99:0,584,8102	1/1:0,20:20:60.20:835,60,0	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:193,0:193:99:0,581,8060	0/0:178,0:178:99:0,536,7433	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:173,0:173:99:0,521,7225	./.	1/1:0,35:35:99:1462,105,0
gi|293339394|gb|GU595196.1|	98052	.	C	T	2135.50	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.057;DP=2642;Dels=0.00;FS=38.275;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9994;MQ=254.00;MQ0=0;MQRankSum=0.816;QD=39.55;ReadPosRankSum=-8.614;SB=-582.76	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:196,0:196:99:0,590,8185	1/1:0,9:9:27.09:376,27,0	1/1:0,20:20:60.20:835,60,0	0/0:93,0:93:99:0,280,3884	0/0:98,0:98:99:0,295,4093	0/0:172,0:172:99:0,518,7183	0/0:81,0:81:99:0,244,3383	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:149,0:149:99:0,448,6222	0/0:141,0:141:99:0,424,5888	0/0:160,0:160:99:0,482,6682	0/0:133,0:133:99:0,400,5554	0/0:183,0:183:99:0,551,7642	0/0:162,0:162:99:0,488,6765	1/1:0,9:9:27.09:376,27,0	1/1:0,16:16:48.16:668,48,0
gi|293339394|gb|GU595196.1|	98058	.	C	T	4009.01	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.073;DP=2701;Dels=0.00;FS=36.007;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9998;MQ=254.00;MQ0=0;MQRankSum=0.633;QD=41.76;ReadPosRankSum=-7.688;SB=-1334.49	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:192,0:192:99:0,578,8018	1/1:0,14:14:42.14:585,42,0	1/1:0,37:37:99:1545,111,0	0/0:90,0:90:99:0,271,3758	0/0:99,0:99:99:0,298,4134	0/0:176,0:176:99:0,530,7350	0/0:84,0:84:99:0,253,3508	0/0:158,0:158:99:0,476,6598	0/0:181,0:181:99:0,545,7559	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:157,0:157:99:0,473,6556	0/0:153,0:153:99:0,461,6389	0/0:144,0:144:99:0,433,6013	0/0:169,0:169:99:0,509,7057	0/0:134,0:134:99:0,403,5596	0/0:178,0:178:99:0,536,7433	0/0:163,0:163:99:0,491,6807	1/1:0,10:10:30.10:418,30,0	1/1:0,35:35:99:1462,105,0
gi|293339394|gb|GU595196.1|	98115	.	G	C	1809.12	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.063;DP=2719;Dels=0.00;FS=19.707;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9465;MQ=254.00;MQ0=0;MQRankSum=0.327;QD=39.33;ReadPosRankSum=-8.302;SB=-584.45	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:181,0:181:99:0,545,7559	1/1:0,9:9:27.09:376,27,0	1/1:0,18:18:54.18:752,54,0	0/0:93,0:93:99:0,280,3884	0/0:99,0:99:99:0,298,4134	0/0:182,0:182:99:0,548,7600	0/0:86,0:86:99:0,259,3591	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	0/0:145,0:145:99:0,436,6055	0/0:166,0:166:99:0,500,6932	0/0:151,0:151:99:0,455,6306	0/0:189,0:189:99:0,569,7893	0/0:169,0:169:99:0,509,7057	0/0:186,0:186:99:0,560,7767	0/0:168,0:168:99:0,506,7016	0/0:177,0:177:99:0,533,7392	0/0:170,0:170:99:0,512,7099	1/1:0,1:1:3.01:42,3,0	1/1:0,18:18:54.18:752,54,0
gi|293339394|gb|GU595196.1|	98118	.	C	G	1149.70	.	AC=6;AF=0.150;AN=40;BaseQRankSum=-0.588;DP=2718;Dels=0.00;FS=13.793;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9983;MQ=254.00;MQ0=0;MQRankSum=-0.694;QD=38.32;ReadPosRankSum=-8.221;SB=-374.73	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:172,0:172:99:0,518,7183	1/1:0,7:7:21.07:292,21,0	1/1:0,11:11:33.11:459,33,0	0/0:91,0:91:99:0,274,3800	0/0:100,0:100:99:0,301,4176	0/0:188,0:188:99:0,566,7851	0/0:86,0:86:99:0,259,3591	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:149,0:149:99:0,448,6222	0/0:163,0:163:99:0,491,6807	0/0:154,0:154:99:0,464,6431	0/0:191,0:191:99:0,575,7976	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	0/0:170,0:170:99:0,512,7099	0/0:182,0:182:99:0,548,7600	0/0:164,0:164:99:0,494,6849	./.	1/1:0,12:12:36.12:501,36,0
gi|293339394|gb|GU595196.1|	98160	.	G	A	7725.68	.	AC=4;AF=0.118;AN=34;BaseQRankSum=0.148;DP=2742;Dels=0.00;FS=29.853;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.523;QD=41.76;ReadPosRankSum=-0.923;SB=-2839.72	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	./.	./.	1/1:0,88:88:99:3675,265,0	0/0:122,0:122:99:0,367,5095	0/0:177,0:177:99:0,533,7392	1/1:0,97:97:99:4051,292,0	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:190,0:190:99:0,572,7934	0/0:154,0:154:99:0,464,6431	0/0:194,0:194:99:0,584,8102	0/0:159,0:159:99:0,479,6640	0/0:160,0:160:99:0,482,6682	0/0:197,0:197:99:0,593,8227	0/0:181,0:181:99:0,545,7559	./.	./.
gi|293339394|gb|GU595196.1|	98265	.	A	T	1752.77	.	AC=4;AF=0.105;AN=38;BaseQRankSum=-1.004;DP=2838;Dels=0.00;FS=24.661;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.009;QD=39.84;ReadPosRankSum=-7.446;SB=-501.13	GT:AD:DP:GQ:PL	0/0:204,0:204:99:0,614,8519	0/0:184,0:184:99:0,554,7684	./.	1/1:0,18:18:54.18:752,54,0	0/0:87,0:87:99:0,262,3633	0/0:105,0:105:99:0,316,4385	0/0:185,0:185:99:0,557,7726	0/0:137,0:137:99:0,412,5721	0/0:163,0:163:99:0,491,6807	0/0:157,0:157:99:0,473,6556	0/0:166,0:166:99:0,500,6932	0/0:182,0:182:99:0,548,7600	0/0:174,0:174:99:0,524,7266	0/0:190,0:190:99:0,572,7934	0/0:185,0:185:99:0,557,7726	0/0:180,0:180:99:0,542,7517	0/0:154,0:154:99:0,464,6431	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	./.	1/1:0,26:26:78.26:1086,78,0
gi|293339394|gb|GU595196.1|	98274	.	T	C	3005.58	.	AC=4;AF=0.105;AN=38;BaseQRankSum=0.487;DP=2820;Dels=0.00;FS=53.203;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.706;QD=40.62;ReadPosRankSum=-2.903;SB=-709.94	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:194,0:194:99:0,584,8102	./.	1/1:0,32:32:96.32:1336,96,0	0/0:83,0:83:99:0,250,3466	0/0:112,0:112:99:0,337,4677	0/0:177,0:177:99:0,533,7392	0/0:135,0:135:99:0,406,5638	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	0/0:176,0:176:99:0,530,7350	0/0:172,0:172:99:0,518,7183	0/0:187,0:187:99:0,563,7809	0/0:175,0:175:99:0,527,7308	0/0:164,0:164:99:0,494,6849	0/0:159,0:159:99:0,479,6640	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	./.	1/1:0,42:42:99:1754,126,0
gi|293339394|gb|GU595196.1|	98451	.	G	C	4050.77	.	AC=4;AF=0.105;AN=38;BaseQRankSum=1.601;DP=2769;Dels=0.00;FS=2.178;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.290;QD=41.76;ReadPosRankSum=0.063;SB=-1837.47	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:169,0:169:99:0,509,7057	./.	1/1:0,51:51:99:2130,154,0	0/0:87,0:87:99:0,262,3633	0/0:109,0:109:99:0,328,4552	0/0:181,0:181:99:0,545,7559	0/0:132,0:132:99:0,397,5512	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	0/0:175,0:175:99:0,527,7308	0/0:152,0:152:99:0,458,6348	0/0:157,0:157:99:0,473,6556	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:181,0:181:99:0,545,7559	0/0:152,0:152:99:0,458,6348	0/0:167,0:167:99:0,503,6974	0/0:177,0:177:99:0,533,7392	./.	1/1:0,46:46:99:1921,138,0
gi|293339394|gb|GU595196.1|	98535	.	A	G	8560.89	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.486;DP=2902;Dels=0.00;FS=125.905;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8899;MQ=254.00;MQ0=0;MQRankSum=-0.100;QD=41.76;ReadPosRankSum=2.050;SB=-2027.36	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:181,0:181:99:0,545,7559	1/1:0,1:1:3.01:42,3,0	1/1:0,92:92:99:3842,277,0	0/0:94,0:94:99:0,283,3925	0/0:77,0:77:99:0,232,3216	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:149,0:149:99:0,448,6222	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:183,0:183:99:0,551,7642	0/0:143,0:143:99:0,430,5972	1/1:0,1:1:3.01:42,3,0	1/1:0,111:111:99:4635,334,0
gi|293339394|gb|GU595196.1|	98541	.	C	T	7433.36	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.801;DP=2890;Dels=0.00;FS=109.020;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8899;MQ=254.00;MQ0=0;MQRankSum=0.539;QD=41.76;ReadPosRankSum=3.212;SB=-1776.80	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	1/1:0,1:1:3.01:42,3,0	1/1:0,83:83:99:3466,250,0	0/0:99,0:99:99:0,298,4134	0/0:80,0:80:99:0,241,3341	0/0:190,0:190:99:0,572,7934	0/0:179,0:179:99:0,539,7475	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:144,0:144:99:0,433,6013	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:140,0:140:99:0,421,5846	1/1:0,1:1:3.01:42,3,0	1/1:0,93:93:99:3884,280,0
gi|293339394|gb|GU595196.1|	98580	.	C	T	1898.48	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.206;DP=2763;Dels=0.00;FS=48.638;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9131;MQ=254.00;MQ0=0;MQRankSum=-1.166;QD=39.55;ReadPosRankSum=3.413;SB=-354.53	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:180,0:180:99:0,542,7517	1/1:0,2:2:6.02:84,6,0	1/1:0,22:22:66.22:919,66,0	0/0:78,0:78:99:0,235,3257	0/0:97,0:97:99:0,292,4051	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:149,0:149:99:0,448,6222	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:198,0:198:99:0,596,8269	0/0:156,0:156:99:0,470,6515	0/0:170,0:170:99:0,512,7099	1/1:0,1:1:3.01:42,3,0	1/1:0,23:23:69.23:960,69,0
gi|293339394|gb|GU595196.1|	98583	.	C	T	1898.48	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.030;DP=2774;Dels=0.00;FS=48.589;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9131;MQ=254.00;MQ0=0;MQRankSum=-0.560;QD=39.55;ReadPosRankSum=0.513;SB=-354.53	GT:AD:DP:GQ:PL	0/0:194,0:194:99:0,584,8102	0/0:177,0:177:99:0,533,7392	1/1:0,2:2:6.02:84,6,0	1/1:0,22:22:66.22:919,66,0	0/0:77,0:77:99:0,232,3216	0/0:98,0:98:99:0,295,4093	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:156,0:156:99:0,470,6515	0/0:149,0:149:99:0,448,6222	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:186,0:186:99:0,560,7767	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:204,0:204:99:0,614,8519	0/0:149,0:149:99:0,448,6222	0/0:177,0:177:99:0,533,7392	1/1:0,1:1:3.01:42,3,0	1/1:0,23:23:69.23:960,69,0
gi|293339394|gb|GU595196.1|	98662	.	C	T	936.40	.	AC=8;AF=0.190;AN=42;BaseQRankSum=1.523;DP=2797;Dels=0.00;FS=1.620;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9269;MQ=254.00;MQ0=0;MQRankSum=0.003;QD=37.46;ReadPosRankSum=-7.158;SB=-432.42	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	1/1:0,1:1:3.01:42,3,0	1/1:0,7:7:21.07:292,21,0	0/0:84,0:84:99:0,253,3508	0/0:102,0:102:99:0,307,4260	0/0:204,0:204:99:0,614,8519	0/0:148,0:148:99:0,445,6181	0/0:183,0:183:99:0,551,7642	0/0:171,0:171:99:0,515,7141	0/0:183,0:183:99:0,551,7642	0/0:174,0:174:99:0,524,7266	0/0:183,0:183:99:0,551,7642	0/0:157,0:157:99:0,473,6556	0/0:149,0:149:99:0,448,6222	0/0:189,0:189:99:0,569,7893	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	1/1:0,3:3:9.03:125,9,0	1/1:0,14:14:42.14:585,42,0
gi|293339394|gb|GU595196.1|	98696	.	G	A	9980.74	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.466;DP=2927;Dels=0.00;FS=0.493;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.219;QD=41.76;ReadPosRankSum=6.395;SB=-4969.50	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:184,0:184:99:0,554,7684	1/1:0,26:26:78.26:1086,78,0	1/1:0,93:93:99:3884,280,0	0/0:78,0:78:99:0,235,3257	0/0:105,0:105:99:0,316,4385	0/0:180,0:180:99:0,542,7517	0/0:153,0:153:99:0,461,6389	0/0:182,0:182:99:0,548,7600	0/0:171,0:171:99:0,515,7141	0/0:146,0:146:99:0,439,6097	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:178,0:178:99:0,536,7433	0/0:154,0:154:99:0,464,6431	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	1/1:0,18:18:54.18:752,54,0	1/1:0,102:102:99:4260,307,0
gi|293339394|gb|GU595196.1|	98718	.	G	A	8477.37	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.165;DP=2867;Dels=0.00;FS=0.822;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.678;QD=41.76;ReadPosRankSum=3.169;SB=-4217.81	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:183,0:183:99:0,551,7642	1/1:0,24:24:72.24:1002,72,0	1/1:0,75:75:99:3132,226,0	0/0:78,0:78:99:0,235,3257	0/0:110,0:110:99:0,331,4594	0/0:186,0:186:99:0,560,7767	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:156,0:156:99:0,470,6515	0/0:136,0:136:99:0,409,5679	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	1/1:0,16:16:48.16:668,48,0	1/1:0,88:88:99:3675,265,0
gi|293339394|gb|GU595196.1|	98742	.	T	C	1427.91	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.316;DP=2807;Dels=0.00;FS=2.072;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9903;MQ=254.00;MQ0=0;MQRankSum=0.454;QD=38.59;ReadPosRankSum=-4.822;SB=-677.00	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	1/1:0,5:5:15.05:209,15,0	1/1:0,9:9:27.09:376,27,0	0/0:77,0:77:99:0,232,3216	0/0:108,0:108:99:0,325,4510	0/0:208,0:208:99:0,626,8686	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:159,0:159:99:0,479,6640	0/0:145,0:145:99:0,436,6055	0/0:166,0:166:99:0,500,6932	0/0:160,0:160:99:0,482,6682	0/0:186,0:186:99:0,560,7767	0/0:183,0:183:99:0,551,7642	0/0:178,0:178:99:0,536,7433	0/0:187,0:187:99:0,563,7809	0/0:186,0:186:99:0,560,7767	0/0:168,0:168:99:0,506,7016	1/1:0,5:5:15.05:209,15,0	1/1:0,18:18:54.18:752,54,0
gi|293339394|gb|GU595196.1|	98795	.	G	A	11275.31	.	AC=4;AF=0.118;AN=34;BaseQRankSum=0.514;DP=2737;Dels=0.00;FS=3.929;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.743;QD=41.76;ReadPosRankSum=0.043;SB=-5345.34	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	./.	./.	0/0:92,0:92:99:0,277,3842	1/1:0,103:103:99:4301,310,0	1/1:0,167:167:99:6974,503,0	0/0:153,0:153:99:0,461,6389	0/0:167,0:167:99:0,503,6974	0/0:146,0:146:99:0,439,6097	0/0:197,0:197:99:0,593,8227	0/0:167,0:167:99:0,503,6974	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:169,0:169:99:0,509,7057	0/0:179,0:179:99:0,539,7475	0/0:170,0:170:99:0,512,7099	0/0:194,0:194:99:0,584,8102	./.	./.
gi|293339394|gb|GU595196.1|	98829	.	A	G	805.67	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.345;DP=2758;Dels=0.00;FS=26.154;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9705;MQ=254.00;MQ0=0;MQRankSum=-0.119;QD=36.62;ReadPosRankSum=-3.057;SB=-164.08	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	1/1:0,9:9:27.09:376,27,0	1/1:0,3:3:9.03:125,9,0	0/0:81,0:81:99:0,244,3383	0/0:101,0:101:99:0,304,4218	0/0:191,0:191:99:0,575,7976	0/0:162,0:162:99:0,488,6765	0/0:155,0:155:99:0,467,6473	0/0:160,0:160:99:0,482,6682	0/0:187,0:187:99:0,563,7809	0/0:174,0:174:99:0,524,7266	0/0:152,0:152:99:0,458,6348	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:183,0:183:99:0,551,7642	1/1:0,6:6:18.06:251,18,0	1/1:0,4:4:12.04:167,12,0
gi|293339394|gb|GU595196.1|	98850	.	A	G	2892.83	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.277;DP=2743;Dels=0.00;FS=69.039;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9733;MQ=254.00;MQ0=0;MQRankSum=-1.363;QD=40.18;ReadPosRankSum=1.797;SB=-582.69	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:178,0:178:99:0,536,7433	1/1:0,41:41:99:1712,123,0	1/1:0,3:3:9.03:125,9,0	0/0:89,0:89:99:0,268,3717	0/0:94,0:94:99:0,283,3925	0/0:212,0:212:99:0,638,8853	0/0:163,0:163:99:0,491,6807	0/0:152,0:152:99:0,458,6348	0/0:155,0:155:99:0,467,6473	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:153,0:153:99:0,461,6389	0/0:182,0:182:99:0,548,7600	0/0:154,0:154:99:0,464,6431	0/0:155,0:155:99:0,467,6473	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:159,0:159:99:0,479,6640	1/1:0,24:24:72.24:1002,72,0	1/1:0,4:4:12.04:167,12,0
gi|293339394|gb|GU595196.1|	98871	.	G	A	1918	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.126;DP=2797;Dels=0.00;FS=44.988;HRun=0;HaplotypeScore=2.2854;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.840;QD=39.96;ReadPosRankSum=1.348;SB=-375.86	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:154,0:154:99:0,464,6431	0/0:57,0:57:99:0,172,2380	1/1:0,29:29:87.29:1211,87,0	0/0:90,0:90:99:0,271,3758	0/0:99,0:99:99:0,298,4134	0/0:193,0:193:99:0,581,8060	0/0:155,0:155:99:0,467,6473	0/0:149,0:149:99:0,448,6222	0/0:168,0:168:99:0,506,7016	0/0:145,0:145:99:0,436,6055	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:181,0:181:99:0,545,7559	0/0:162,0:162:99:0,488,6765	0/0:156,0:156:99:0,470,6515	0/0:167,0:167:99:0,503,6974	0/0:157,0:157:99:0,473,6556	0/0:166,0:166:99:0,500,6932	0/0:36,0:36:99:0,108,1503	1/1:0,19:19:57.19:793,57,0
gi|293339394|gb|GU595196.1|	98874	.	T	G	5971.75	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.898;DP=2801;Dels=0.00;FS=93.182;HRun=0;HaplotypeScore=2.2854;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.151;QD=41.76;ReadPosRankSum=4.591;SB=-1378.11	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:150,0:150:99:0,452,6264	1/1:0,51:51:99:2130,154,0	1/1:0,35:35:99:1462,105,0	0/0:88,0:88:99:0,265,3675	0/0:104,0:104:99:0,313,4343	0/0:193,0:193:99:0,581,8060	0/0:157,0:157:99:0,473,6556	0/0:147,0:147:99:0,442,6139	0/0:169,0:169:99:0,509,7057	0/0:149,0:149:99:0,448,6222	0/0:174,0:174:99:0,524,7266	0/0:167,0:167:99:0,503,6974	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	0/0:151,0:151:99:0,455,6306	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	1/1:0,33:33:99:1378,99,0	1/1:0,24:24:72.24:1002,72,0
gi|293339394|gb|GU595196.1|	98907	.	T	C	1542.16	.	AC=4;AF=0.095;AN=42;BaseQRankSum=2.038;DP=2901;Dels=0.00;FS=8.241;HRun=2;HaplotypeScore=1.8569;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.385;QD=39.54;ReadPosRankSum=2.021;SB=-626.21	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:158,0:158:99:0,476,6598	1/1:0,21:21:63.21:877,63,0	0/0:69,0:69:99:0,208,2881	0/0:81,0:81:99:0,244,3383	0/0:110,0:110:99:0,331,4594	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	0/0:154,0:154:99:0,464,6431	0/0:156,0:156:99:0,470,6515	0/0:151,0:151:99:0,455,6306	0/0:176,0:176:99:0,530,7350	0/0:182,0:182:99:0,548,7600	0/0:179,0:179:99:0,539,7475	0/0:184,0:184:99:0,554,7684	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:183,0:183:99:0,551,7642	0/0:154,0:154:99:0,464,6431	1/1:0,18:18:54.18:752,54,0	0/0:85,0:85:99:0,256,3550
gi|293339394|gb|GU595196.1|	98913	.	A	G	7349.84	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.313;DP=2848;Dels=0.00;FS=40.390;HRun=0;HaplotypeScore=1.1903;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.138;QD=41.76;ReadPosRankSum=4.229;SB=-2585.61	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:164,0:164:99:0,494,6849	1/1:0,15:15:45.15:626,45,0	1/1:0,69:69:99:2881,208,0	0/0:78,0:78:99:0,235,3257	0/0:106,0:106:99:0,319,4427	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:142,0:142:99:0,427,5930	0/0:174,0:174:99:0,524,7266	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:182,0:182:99:0,548,7600	0/0:147,0:147:99:0,442,6139	1/1:0,11:11:33.11:459,33,0	1/1:0,81:81:99:3383,244,0
gi|293339394|gb|GU595196.1|	98934	.	G	A	1291.61	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.841;DP=2980;Dels=0.00;FS=49.944;HRun=0;HaplotypeScore=0.6190;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.588;QD=39.14;ReadPosRankSum=-0.372;SB=-167.02	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:184,0:184:99:0,554,7684	1/1:0,20:20:60.20:835,60,0	0/0:67,0:67:99:0,202,2798	0/0:81,0:81:99:0,244,3383	0/0:99,0:99:99:0,298,4134	0/0:194,0:194:99:0,584,8102	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:152,0:152:99:0,458,6348	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:177,0:177:99:0,533,7392	0/0:182,0:182:99:0,548,7600	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:189,0:189:99:0,569,7893	0/0:158,0:158:99:0,476,6598	1/1:0,13:13:39.13:543,39,0	0/0:90,0:90:99:0,271,3758
gi|293339394|gb|GU595196.1|	98940	.	G	A	564.07	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.232;DP=3004;Dels=0.00;FS=21.280;HRun=0;HaplotypeScore=0.7142;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.487;QD=37.60;ReadPosRankSum=1.562;SB=-83.51	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:184,0:184:99:0,554,7684	0/0:27,0:27:81.27:0,81,1128	0/0:64,0:64:99:0,193,2673	0/0:82,0:82:99:0,247,3424	0/0:102,0:102:99:0,307,4260	0/0:208,0:208:99:0,626,8686	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:146,0:146:99:0,439,6097	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:185,0:185:99:0,557,7726	0/0:189,0:189:99:0,569,7893	0/0:153,0:153:99:0,461,6389	1/1:0,15:15:45.15:626,45,0	0/0:92,0:92:99:0,277,3842
gi|293339394|gb|GU595196.1|	99045	.	T	C	16662.39	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.095;DP=3117;Dels=0.00;FS=200.794;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.565;QD=41.76;ReadPosRankSum=1.216;SB=-4426.61	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:152,0:152:99:0,458,6348	1/1:0,95:95:99:3967,286,0	1/1:0,117:117:99:4886,352,0	0/0:90,0:90:99:0,271,3758	0/0:101,0:101:99:0,304,4218	0/0:179,0:179:99:0,539,7475	0/0:188,0:188:99:0,566,7851	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	0/0:154,0:154:99:0,464,6431	0/0:147,0:147:99:0,442,6139	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:187,0:187:99:0,563,7809	0/0:154,0:154:99:0,464,6431	1/1:0,58:58:99:2422,175,0	1/1:0,129:129:99:5387,388,0
gi|293339394|gb|GU595196.1|	99093	.	C	T	5929.99	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.323;DP=2860;Dels=0.00;FS=48.331;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=3.188;QD=41.76;ReadPosRankSum=-5.137;SB=-1837.47	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:159,0:159:99:0,479,6640	1/1:0,22:22:66.22:919,66,0	1/1:0,46:46:99:1921,138,0	0/0:93,0:93:99:0,280,3884	0/0:99,0:99:99:0,298,4134	0/0:203,0:203:99:0,611,8477	0/0:162,0:162:99:0,488,6765	0/0:155,0:155:99:0,467,6473	0/0:169,0:169:99:0,509,7057	0/0:155,0:155:99:0,467,6473	0/0:178,0:178:99:0,536,7433	0/0:171,0:171:99:0,515,7141	0/0:204,0:204:99:0,614,8519	0/0:168,0:168:99:0,506,7016	0/0:143,0:143:99:0,430,5972	0/0:173,0:173:99:0,521,7225	0/0:154,0:154:99:0,464,6431	0/0:175,0:175:99:0,527,7308	1/1:0,31:31:93.31:1295,93,0	1/1:0,43:43:99:1796,129,0
gi|293339394|gb|GU595196.1|	99099	.	T	C	3925.49	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-2.354;DP=2838;Dels=0.00;FS=29.717;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.111;QD=41.76;ReadPosRankSum=-7.870;SB=-1252.82	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:159,0:159:99:0,479,6640	1/1:0,18:18:54.18:752,54,0	1/1:0,27:27:81.27:1128,81,0	0/0:96,0:96:99:0,289,4009	0/0:100,0:100:99:0,301,4176	0/0:203,0:203:99:0,611,8477	0/0:161,0:161:99:0,485,6723	0/0:150,0:150:99:0,452,6264	0/0:183,0:183:99:0,551,7642	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:197,0:197:99:0,593,8227	0/0:167,0:167:99:0,503,6974	0/0:144,0:144:99:0,433,6013	0/0:179,0:179:99:0,539,7475	0/0:157,0:157:99:0,473,6556	0/0:181,0:181:99:0,545,7559	1/1:0,18:18:54.18:752,54,0	1/1:0,31:31:93.31:1295,93,0
gi|293339394|gb|GU595196.1|	99126	.	T	C	6639.91	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.579;DP=2839;Dels=0.00;FS=1.280;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.500;QD=41.76;ReadPosRankSum=-7.139;SB=-3132.04	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:137,0:137:99:0,412,5721	1/1:0,38:38:99:1587,114,0	1/1:0,44:44:99:1837,132,0	0/0:88,0:88:99:0,265,3675	0/0:94,0:94:99:0,283,3925	0/0:195,0:195:99:0,587,8143	0/0:137,0:137:99:0,412,5721	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:177,0:177:99:0,533,7392	0/0:148,0:148:99:0,445,6181	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	0/0:145,0:145:99:0,436,6055	0/0:193,0:193:99:0,581,8060	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	1/1:0,21:21:63.21:877,63,0	1/1:0,56:56:99:2339,169,0
gi|293339394|gb|GU595196.1|	99144	.	T	C	14031.49	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.995;DP=3043;Dels=0.00;FS=7.826;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.920;QD=41.76;ReadPosRankSum=7.161;SB=-6389.35	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:148,0:148:99:0,445,6181	1/1:0,75:75:99:3132,226,0	1/1:0,97:97:99:4051,292,0	0/0:98,0:98:99:0,295,4093	0/0:96,0:96:99:0,289,4009	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	0/0:154,0:154:99:0,464,6431	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:142,0:142:99:0,427,5930	0/0:143,0:143:99:0,430,5972	0/0:212,0:212:99:0,638,8853	0/0:184,0:184:99:0,554,7684	0/0:167,0:167:99:0,503,6974	1/1:0,42:42:99:1754,126,0	1/1:0,122:122:99:5095,367,0
gi|293339394|gb|GU595196.1|	99174	.	G	A	23177	.	AC=8;AF=0.190;AN=42;BaseQRankSum=1.829;DP=3338;Dels=0.00;FS=4.826;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.306;QD=41.76;ReadPosRankSum=2.232;SB=-11066.51	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:174,0:174:99:0,524,7266	1/1:0,122:122:99:5095,367,0	1/1:0,158:158:99:6598,476,0	0/0:87,0:87:99:0,262,3633	0/0:102,0:102:99:0,307,4260	0/0:170,0:170:99:0,512,7099	0/0:182,0:182:99:0,548,7600	0/0:177,0:177:99:0,533,7392	0/0:190,0:190:99:0,572,7934	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	0/0:172,0:172:99:0,518,7183	0/0:141,0:141:99:0,424,5888	0/0:181,0:181:99:0,545,7559	0/0:190,0:190:99:0,572,7934	0/0:170,0:170:99:0,512,7099	0/0:156,0:156:99:0,470,6515	1/1:0,63:63:99:2631,190,0	1/1:0,212:212:99:8853,638,0
gi|293339394|gb|GU595196.1|	99539	.	T	G	4384.85	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.255;DP=3067;Dels=0.00;FS=1.158;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.107;QD=41.76;ReadPosRankSum=-5.959;SB=-2088.03	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:187,0:187:99:0,563,7809	1/1:0,37:37:99:1545,111,0	0/0:201,0:201:99:0,605,8394	0/0:89,0:89:99:0,268,3717	0/0:92,0:92:99:0,277,3842	0/0:183,0:183:99:0,551,7642	1/1:0,44:44:99:1837,132,0	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:180,0:180:99:0,542,7517	0/0:153,0:153:99:0,461,6389	0/0:189,0:189:99:0,569,7893	0/0:156,0:156:99:0,470,6515	0/0:166,0:166:99:0,500,6932	1/1:0,24:24:72.24:1002,72,0	0/0:183,0:183:99:0,551,7642
gi|293339394|gb|GU595196.1|	99551	.	T	G	857.73	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.515;DP=2946;Dels=0.00;FS=0.770;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9925;MQ=254.00;MQ0=0;MQRankSum=0.206;QD=37.29;ReadPosRankSum=-7.222;SB=-450.72	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:169,0:169:99:0,509,7057	1/1:0,7:7:21.07:292,21,0	0/0:185,0:185:99:0,557,7726	0/0:81,0:81:99:0,244,3383	0/0:99,0:99:99:0,298,4134	0/0:180,0:180:99:0,542,7517	1/1:0,11:11:33.11:459,33,0	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:184,0:184:99:0,554,7684	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:177,0:177:99:0,533,7392	0/0:156,0:156:99:0,470,6515	0/0:183,0:183:99:0,551,7642	0/0:154,0:154:99:0,464,6431	0/0:164,0:164:99:0,494,6849	1/1:0,5:5:15.05:209,15,0	0/0:177,0:177:99:0,533,7392
gi|293339394|gb|GU595196.1|	99581	.	G	A	898.32	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.578;DP=2952;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9968;MQ=254.00;MQ0=0;MQRankSum=0.456;QD=37.43;ReadPosRankSum=-7.266;SB=-489.60	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:170,0:170:99:0,512,7099	1/1:0,10:10:30.10:418,30,0	0/0:152,0:152:99:0,458,6348	0/0:86,0:86:99:0,259,3591	0/0:107,0:107:99:0,322,4468	0/0:168,0:168:99:0,506,7016	1/1:0,7:7:21.07:292,21,0	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:185,0:185:99:0,557,7726	0/0:183,0:183:99:0,551,7642	0/0:191,0:191:99:0,575,7976	0/0:191,0:191:99:0,575,7976	0/0:189,0:189:99:0,569,7893	0/0:178,0:178:99:0,536,7433	0/0:169,0:169:99:0,509,7057	0/0:155,0:155:99:0,467,6473	0/0:146,0:146:99:0,439,6097	1/1:0,7:7:21.07:292,21,0	0/0:175,0:175:99:0,527,7308
gi|293339394|gb|GU595196.1|	99620	.	G	T	12402.84	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.134;DP=3222;Dels=0.00;FS=1.457;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-3.434;QD=41.76;ReadPosRankSum=2.960;SB=-6013.51	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:179,0:179:99:0,539,7475	1/1:0,92:92:99:3842,277,0	0/0:137,0:137:99:0,412,5721	0/0:87,0:87:99:0,262,3633	0/0:107,0:107:99:0,322,4468	0/0:180,0:180:99:0,542,7517	1/1:0,142:142:99:5930,427,0	0/0:158,0:158:99:0,476,6598	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	0/0:191,0:191:99:0,575,7976	0/0:181,0:181:99:0,545,7559	0/0:181,0:181:99:0,545,7559	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:147,0:147:99:0,442,6139	1/1:0,63:63:99:2631,190,0	0/0:173,0:173:99:0,521,7225
gi|293339394|gb|GU595196.1|	99632	.	C	T	13697.41	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.089;DP=3253;Dels=0.00;FS=0.422;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.591;QD=41.76;ReadPosRankSum=1.169;SB=-6639.91	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:183,0:183:99:0,551,7642	1/1:0,91:91:99:3800,274,0	0/0:136,0:136:99:0,409,5679	0/0:90,0:90:99:0,271,3758	0/0:109,0:109:99:0,328,4552	0/0:187,0:187:99:0,563,7809	1/1:0,163:163:99:6807,491,0	0/0:166,0:166:99:0,500,6932	0/0:184,0:184:99:0,554,7684	0/0:162,0:162:99:0,488,6765	0/0:141,0:141:99:0,424,5888	0/0:175,0:175:99:0,527,7308	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	1/1:0,74:74:99:3090,223,0	0/0:175,0:175:99:0,527,7308
gi|293339394|gb|GU595196.1|	99728	.	T	C	5804.71	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.653;DP=3240;Dels=0.00;FS=22.634;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.561;QD=41.76;ReadPosRankSum=0.060;SB=-2129.80	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	1/1:0,82:82:99:3424,247,0	0/0:196,0:196:99:0,590,8185	0/0:92,0:92:99:0,277,3842	0/0:104,0:104:99:0,313,4343	0/0:189,0:189:99:0,569,7893	0/0:152,0:152:99:0,458,6348	0/0:172,0:172:99:0,518,7183	0/0:156,0:156:99:0,470,6515	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	0/0:204,0:204:99:0,614,8519	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:179,0:179:99:0,539,7475	0/0:146,0:146:99:0,439,6097	0/0:170,0:170:99:0,512,7099	1/1:0,57:57:99:2380,172,0	0/0:195,0:195:99:0,587,8143
gi|293339394|gb|GU595196.1|	99791	.	A	G	3194.96	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.018;DP=3165;Dels=0.00;FS=32.682;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.002;QD=40.96;ReadPosRankSum=1.537;SB=-960.51	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:207,0:207:99:0,623,8644	0/0:83,0:83:99:0,250,3466	0/0:172,0:172:99:0,518,7183	0/0:77,0:77:99:0,232,3216	0/0:106,0:106:99:0,319,4427	0/0:160,0:160:99:0,482,6682	1/1:0,78:78:99:3257,235,0	0/0:155,0:155:99:0,467,6473	0/0:173,0:173:99:0,521,7225	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:178,0:178:99:0,536,7433	0/0:189,0:189:99:0,569,7893	0/0:148,0:148:99:0,445,6181	0/0:178,0:178:99:0,536,7433	0/0:162,0:162:99:0,488,6765	0/0:180,0:180:99:0,542,7517	0/0:51,0:51:99:0,154,2130	0/0:180,0:180:99:0,542,7517
gi|293339394|gb|GU595196.1|	99806	.	T	A	18040.48	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.385;DP=3032;Dels=0.00;FS=8.357;HRun=0;HaplotypeScore=3.1424;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.221;QD=41.76;ReadPosRankSum=0.977;SB=-8143.28	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:191,0:191:99:0,575,7976	1/1:0,61:61:99:2547,184,0	1/1:0,125:125:99:5220,376,0	0/0:85,0:85:99:0,256,3550	0/0:102,0:102:99:0,307,4260	0/0:177,0:177:99:0,533,7392	1/1:0,96:96:99:4009,289,0	0/0:150,0:150:99:0,452,6264	0/0:174,0:174:99:0,524,7266	0/0:182,0:182:99:0,548,7600	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:189,0:189:99:0,569,7893	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	1/1:0,32:32:96.32:1336,96,0	1/1:0,118:118:99:4928,355,0
gi|293339394|gb|GU595196.1|	99812	.	T	C	2669.69	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.800;DP=2929;Dels=0.00;FS=10.883;HRun=2;HaplotypeScore=3.1424;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.614;QD=40.45;ReadPosRankSum=-2.561;SB=-1044.02	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	1/1:0,40:40:99:1670,120,0	0/0:101,0:101:99:0,304,4218	0/0:77,0:77:99:0,232,3216	0/0:102,0:102:99:0,307,4260	0/0:165,0:165:99:0,497,6890	0/0:104,0:104:99:0,313,4343	0/0:150,0:150:99:0,452,6264	0/0:178,0:178:99:0,536,7433	0/0:186,0:186:99:0,560,7767	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	0/0:148,0:148:99:0,445,6181	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	1/1:0,26:26:78.26:1086,78,0	0/0:100,0:100:99:0,301,4176
gi|293339394|gb|GU595196.1|	99833	.	T	A	6973.99	.	AC=6;AF=0.158;AN=38;BaseQRankSum=0.428;DP=2695;Dels=0.00;FS=6.970;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.806;QD=41.76;ReadPosRankSum=-1.697;SB=-3048.49	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	./.	1/1:0,17:17:51.17:710,51,0	0/0:80,0:80:99:0,241,3341	0/0:109,0:109:99:0,328,4552	0/0:161,0:161:99:0,485,6723	1/1:0,126:126:99:5262,379,0	0/0:160,0:160:99:0,482,6682	0/0:180,0:180:99:0,542,7517	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:158,0:158:99:0,476,6598	0/0:163,0:163:99:0,491,6807	0/0:194,0:194:99:0,584,8102	0/0:152,0:152:99:0,458,6348	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:169,0:169:99:0,509,7057	./.	1/1:0,24:24:72.24:1002,72,0
gi|293339394|gb|GU595196.1|	99839	.	G	A	2135.42	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.273;DP=2729;Dels=0.00;FS=3.869;HRun=1;HaplotypeScore=5.1422;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=2.072;QD=39.54;ReadPosRankSum=-9.872;SB=-956.70	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:154,0:154:99:0,464,6431	1/1:0,16:16:48.16:668,48,0	1/1:0,17:17:51.17:710,51,0	0/0:79,0:79:99:0,238,3299	0/0:112,0:112:99:0,337,4677	0/0:180,0:180:99:0,542,7517	0/0:140,0:140:99:0,421,5846	0/0:155,0:155:99:0,467,6473	0/0:174,0:174:99:0,524,7266	0/0:184,0:184:99:0,554,7684	0/0:150,0:150:99:0,452,6264	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	0/0:152,0:152:99:0,458,6348	1/1:0,9:9:27.09:376,27,0	1/1:0,12:12:36.12:501,36,0
gi|293339394|gb|GU595196.1|	99842	.	T	C	3800.21	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.777;DP=2779;Dels=0.00;FS=1.253;HRun=2;HaplotypeScore=6.9038;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.246;QD=41.76;ReadPosRankSum=-10.752;SB=-1795.50	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:152,0:152:99:0,458,6348	1/1:0,23:23:69.23:960,69,0	1/1:0,28:28:84.28:1169,84,0	0/0:86,0:86:99:0,259,3591	0/0:119,0:119:99:0,358,4969	0/0:181,0:181:99:0,545,7559	0/0:144,0:144:99:0,433,6013	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:150,0:150:99:0,452,6264	0/0:161,0:161:99:0,485,6723	0/0:172,0:172:99:0,518,7183	0/0:182,0:182:99:0,548,7600	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:150,0:150:99:0,452,6264	1/1:0,15:15:45.15:626,45,0	1/1:0,25:25:75.25:1044,75,0
gi|293339394|gb|GU595196.1|	99863	.	T	C	5846.47	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.127;DP=3016;Dels=0.00;FS=1.368;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.801;QD=41.76;ReadPosRankSum=-0.737;SB=-2839.72	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:156,0:156:99:0,470,6515	0/0:71,0:71:99:0,214,2965	0/0:78,0:78:99:0,235,3257	0/0:99,0:99:99:0,298,4134	0/0:130,0:130:99:0,391,5429	0/0:189,0:189:99:0,569,7893	1/1:0,140:140:99:5846,421,0	0/0:188,0:188:99:0,566,7851	0/0:168,0:168:99:0,506,7016	0/0:174,0:174:99:0,524,7266	0/0:156,0:156:99:0,470,6515	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:184,0:184:99:0,554,7684	0/0:168,0:168:99:0,506,7016	0/0:151,0:151:99:0,455,6306	0/0:153,0:153:99:0,461,6389	0/0:160,0:160:99:0,482,6682	0/0:50,0:50:99:0,151,2088	0/0:100,0:100:99:0,301,4176
gi|293339394|gb|GU595196.1|	99890	.	G	A	20546.10	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.337;DP=3251;Dels=0.00;FS=15.046;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.704;QD=41.76;ReadPosRankSum=-0.154;SB=-9020.25	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	1/1:0,99:99:99:4134,298,0	1/1:0,145:145:99:6055,436,0	0/0:92,0:92:99:0,277,3842	0/0:125,0:125:99:0,376,5220	0/0:198,0:198:99:0,596,8269	0/0:152,0:152:99:0,458,6348	0/0:184,0:184:99:0,554,7684	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:160,0:160:99:0,482,6682	0/0:159,0:159:99:0,479,6640	0/0:177,0:177:99:0,533,7392	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	1/1:0,81:81:99:3383,244,0	1/1:0,167:167:99:6974,503,0
gi|293339394|gb|GU595196.1|	99920	.	T	C	5888.23	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.536;DP=3256;Dels=0.00;FS=6.434;HRun=0;HaplotypeScore=13.0935;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.648;QD=41.76;ReadPosRankSum=0.118;SB=-2463.88	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:178,0:178:99:0,536,7433	0/0:101,0:101:99:0,304,4218	0/0:165,0:165:99:0,497,6890	0/0:78,0:78:99:0,235,3257	0/0:108,0:108:99:0,325,4510	0/0:181,0:181:99:0,545,7559	1/1:0,141:141:99:5888,424,0	0/0:181,0:181:99:0,545,7559	0/0:178,0:178:99:0,536,7433	0/0:172,0:172:99:0,518,7183	0/0:183,0:183:99:0,551,7642	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	0/0:180,0:180:99:0,542,7517	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:181,0:181:99:0,545,7559	0/0:81,0:81:99:0,244,3383	0/0:168,0:168:99:0,506,7016
gi|293339394|gb|GU595196.1|	99922	.	C	T	5846.47	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.831;DP=3245;Dels=0.00;FS=7.795;HRun=0;HaplotypeScore=13.0459;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.542;QD=41.76;ReadPosRankSum=0.027;SB=-2422.12	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:98,0:98:99:0,295,4093	0/0:167,0:167:99:0,503,6974	0/0:80,0:80:99:0,241,3341	0/0:101,0:101:99:0,304,4218	0/0:177,0:177:99:0,533,7392	1/1:0,140:140:99:5846,421,0	0/0:177,0:177:99:0,533,7392	0/0:179,0:179:99:0,539,7475	0/0:177,0:177:99:0,533,7392	0/0:182,0:182:99:0,548,7600	0/0:169,0:169:99:0,509,7057	0/0:159,0:159:99:0,479,6640	0/0:163,0:163:99:0,491,6807	0/0:179,0:179:99:0,539,7475	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:79,0:79:99:0,238,3299	0/0:172,0:172:99:0,518,7183
gi|293339394|gb|GU595196.1|	99926	.	G	T	14365.57	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.363;DP=3240;Dels=0.00;FS=42.168;HRun=1;HaplotypeScore=11.8079;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.388;QD=41.76;ReadPosRankSum=-0.125;SB=-5303.58	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	0/0:96,0:96:99:0,289,4009	1/1:0,166:166:99:6932,500,0	0/0:83,0:83:99:0,250,3466	0/0:99,0:99:99:0,298,4134	0/0:180,0:180:99:0,542,7517	0/0:141,0:141:99:0,424,5888	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	0/0:173,0:173:99:0,521,7225	0/0:182,0:182:99:0,548,7600	0/0:77,0:77:99:0,232,3216	1/1:0,178:178:99:7433,536,0
gi|293339394|gb|GU595196.1|	99944	.	T	G	19710.90	.	AC=8;AF=0.190;AN=42;BaseQRankSum=1.178;DP=3192;Dels=0.00;FS=48.699;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.009;QD=41.76;ReadPosRankSum=1.367;SB=-7600.40	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	1/1:0,98:98:99:4093,295,0	1/1:0,155:155:99:6473,467,0	0/0:97,0:97:99:0,292,4051	0/0:86,0:86:99:0,259,3591	0/0:173,0:173:99:0,521,7225	0/0:139,0:139:99:0,418,5805	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	1/1:0,63:63:99:2631,190,0	1/1:0,156:156:99:6515,470,0
gi|293339394|gb|GU595196.1|	100004	.	G	T	19335.05	.	AC=10;AF=0.238;AN=42;BaseQRankSum=1.425;DP=3144;Dels=0.00;FS=14.625;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.517;QD=41.76;ReadPosRankSum=-0.581;SB=-8769.69	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	1/1:0,71:71:99:2965,214,0	1/1:0,94:94:99:3925,283,0	0/0:91,0:91:99:0,274,3800	0/0:110,0:110:99:0,331,4594	0/0:181,0:181:99:0,545,7559	1/1:0,143:143:99:5972,430,0	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	0/0:186,0:186:99:0,560,7767	0/0:170,0:170:99:0,512,7099	0/0:215,0:215:99:0,647,8978	0/0:177,0:177:99:0,533,7392	0/0:184,0:184:99:0,554,7684	0/0:184,0:184:99:0,554,7684	0/0:152,0:152:99:0,458,6348	0/0:165,0:165:99:0,497,6890	1/1:0,43:43:99:1796,129,0	1/1:0,112:112:99:4677,337,0
gi|293339394|gb|GU595196.1|	100106	.	C	T	13405.09	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.941;DP=2933;Dels=0.00;FS=54.485;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.133;QD=41.76;ReadPosRankSum=5.049;SB=-4718.94	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:159,0:159:99:0,479,6640	1/1:0,56:56:99:2339,169,0	1/1:0,67:67:99:2798,202,0	0/0:105,0:105:99:0,316,4385	0/0:95,0:95:99:0,286,3967	0/0:192,0:192:99:0,578,8018	1/1:0,91:91:99:3800,274,0	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	0/0:194,0:194:99:0,584,8102	0/0:150,0:150:99:0,452,6264	0/0:154,0:154:99:0,464,6431	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:189,0:189:99:0,569,7893	1/1:0,32:32:96.32:1336,96,0	1/1:0,75:75:99:3132,226,0
gi|293339394|gb|GU595196.1|	100124	.	A	G	6097.03	.	AC=10;AF=0.238;AN=42;BaseQRankSum=1.401;DP=2717;Dels=0.00;FS=17.679;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.964;QD=41.76;ReadPosRankSum=-11.140;SB=-2338.47	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:169,0:169:99:0,509,7057	1/1:0,25:25:75.25:1044,75,0	1/1:0,29:29:87.29:1211,87,0	0/0:96,0:96:99:0,289,4009	0/0:101,0:101:99:0,304,4218	0/0:203,0:203:99:0,611,8477	1/1:0,45:45:99:1879,135,0	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:198,0:198:99:0,596,8269	0/0:156,0:156:99:0,470,6515	0/0:150,0:150:99:0,452,6264	0/0:189,0:189:99:0,569,7893	0/0:148,0:148:99:0,445,6181	0/0:155,0:155:99:0,467,6473	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:173,0:173:99:0,521,7225	1/1:0,18:18:54.18:752,54,0	1/1:0,29:29:87.29:1211,87,0
gi|293339394|gb|GU595196.1|	100160	.	C	G	11776.43	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.154;DP=2842;Dels=0.00;FS=13.531;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.744;QD=41.76;ReadPosRankSum=-5.758;SB=-4969.50	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:157,0:157:99:0,473,6556	1/1:0,43:43:99:1796,129,0	1/1:0,66:66:99:2756,199,0	0/0:87,0:87:99:0,262,3633	0/0:107,0:107:99:0,322,4468	0/0:204,0:204:99:0,614,8519	1/1:0,76:76:99:3174,229,0	0/0:191,0:191:99:0,575,7976	0/0:186,0:186:99:0,560,7767	0/0:157,0:157:99:0,473,6556	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	0/0:152,0:152:99:0,458,6348	0/0:143,0:143:99:0,430,5972	0/0:164,0:164:99:0,494,6849	0/0:163,0:163:99:0,491,6807	1/1:0,30:30:90.30:1253,90,0	1/1:0,67:67:99:2798,202,0
gi|293339394|gb|GU595196.1|	100169	.	C	A	17539.36	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.238;DP=3001;Dels=0.00;FS=12.899;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.268;QD=41.76;ReadPosRankSum=2.772;SB=-7642.16	GT:AD:DP:GQ:PL	0/0:192,0:192:99:0,578,8018	0/0:153,0:153:99:0,461,6389	1/1:0,66:66:99:2756,199,0	1/1:0,92:92:99:3842,277,0	0/0:84,0:84:99:0,253,3508	0/0:114,0:114:99:0,343,4761	0/0:205,0:205:99:0,617,8561	1/1:0,115:115:99:4802,346,0	0/0:175,0:175:99:0,527,7308	0/0:176,0:176:99:0,530,7350	0/0:147,0:147:99:0,442,6139	0/0:183,0:183:99:0,551,7642	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:140,0:140:99:0,421,5846	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	1/1:0,47:47:99:1963,141,0	1/1:0,100:100:99:4176,301,0
gi|293339394|gb|GU595196.1|	100227	.	A	G	11400.59	.	AC=8;AF=0.190;AN=42;BaseQRankSum=2.024;DP=3088;Dels=0.00;FS=8.921;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.826;QD=41.76;ReadPosRankSum=-1.947;SB=-5136.54	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	1/1:0,55:55:99:2297,166,0	1/1:0,78:78:99:3257,235,0	0/0:71,0:71:99:0,214,2965	0/0:103,0:103:99:0,310,4301	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:164,0:164:99:0,494,6849	0/0:178,0:178:99:0,536,7433	0/0:190,0:190:99:0,572,7934	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:216,0:216:99:0,650,9020	0/0:153,0:153:99:0,461,6389	0/0:198,0:198:99:0,596,8269	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:203,0:203:99:0,611,8477	1/1:0,41:41:99:1712,123,0	1/1:0,99:99:99:4134,298,0
gi|293339394|gb|GU595196.1|	100235	.	G	A	7809.20	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.342;DP=2979;Dels=0.00;FS=3.032;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.054;QD=41.76;ReadPosRankSum=-10.185;SB=-3633.17	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:178,0:178:99:0,536,7433	1/1:0,37:37:99:1545,111,0	1/1:0,60:60:99:2506,181,0	0/0:70,0:70:99:0,211,2923	0/0:106,0:106:99:0,319,4427	0/0:163,0:163:99:0,491,6807	0/0:155,0:155:99:0,467,6473	0/0:151,0:151:99:0,455,6306	0/0:185,0:185:99:0,557,7726	0/0:190,0:190:99:0,572,7934	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:204,0:204:99:0,614,8519	0/0:145,0:145:99:0,436,6055	0/0:191,0:191:99:0,575,7976	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:194,0:194:99:0,584,8102	1/1:0,27:27:81.27:1128,81,0	1/1:0,63:63:99:2631,190,0
gi|293339394|gb|GU595196.1|	100260	.	A	T	35.21	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.023;DP=2822;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8830;MQ=254.00;MQ0=0;MQRankSum=-0.156;QD=17.60;ReadPosRankSum=-2.408;SB=-38.89	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:191,0:191:99:0,575,7976	1/1:0,2:2:6.02:84,6,0	./.	0/0:94,0:94:99:0,283,3925	0/0:115,0:115:99:0,346,4802	0/0:187,0:187:99:0,563,7809	0/0:142,0:142:99:0,427,5930	0/0:158,0:158:99:0,476,6598	0/0:184,0:184:99:0,554,7684	0/0:187,0:187:99:0,563,7809	0/0:172,0:172:99:0,518,7183	0/0:190,0:190:99:0,572,7934	0/0:197,0:197:99:0,593,8227	0/0:156,0:156:99:0,470,6515	0/0:167,0:167:99:0,503,6974	0/0:189,0:189:99:0,569,7893	0/0:165,0:165:99:0,497,6890	0/0:153,0:153:99:0,461,6389	./.	./.
gi|293339394|gb|GU595196.1|	100295	.	C	T	6598.15	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.554;DP=2871;Dels=0.00;FS=1.657;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.721;QD=41.76;ReadPosRankSum=14.189;SB=-3173.80	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	1/1:0,45:45:99:1879,135,0	1/1:0,42:42:99:1754,126,0	0/0:111,0:111:99:0,334,4635	0/0:97,0:97:99:0,292,4051	0/0:194,0:194:99:0,584,8102	0/0:118,0:118:99:0,355,4928	0/0:184,0:184:99:0,554,7684	0/0:181,0:181:99:0,545,7559	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:186,0:186:99:0,560,7767	0/0:152,0:152:99:0,458,6348	0/0:150,0:150:99:0,452,6264	0/0:147,0:147:99:0,442,6139	0/0:180,0:180:99:0,542,7517	0/0:154,0:154:99:0,464,6431	1/1:0,30:30:90.30:1253,90,0	1/1:0,41:41:99:1712,123,0
gi|293339394|gb|GU595196.1|	100307	.	T	C	3466.13	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.933;DP=2799;Dels=0.00;FS=2.959;HRun=0;HaplotypeScore=3.9519;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.016;QD=41.76;ReadPosRankSum=-1.484;SB=-1586.91	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:45,0:45:99:0,135,1879	1/1:0,42:42:99:1754,126,0	0/0:105,0:105:99:0,316,4385	0/0:93,0:93:99:0,280,3884	0/0:186,0:186:99:0,560,7767	0/0:114,0:114:99:0,343,4761	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:176,0:176:99:0,530,7350	0/0:150,0:150:99:0,452,6264	0/0:147,0:147:99:0,442,6139	0/0:153,0:153:99:0,461,6389	0/0:167,0:167:99:0,503,6974	0/0:155,0:155:99:0,467,6473	0/0:30,0:30:90.30:0,90,1253	1/1:0,41:41:99:1712,123,0
gi|293339394|gb|GU595196.1|	100316	.	G	T	4802.46	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.077;DP=2699;Dels=0.00;FS=1.970;HRun=0;HaplotypeScore=2.6187;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.395;QD=41.76;ReadPosRankSum=0.370;SB=-2296.84	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:167,0:167:99:0,503,6974	0/0:32,0:32:96.32:0,96,1336	0/0:25,0:25:75.25:0,75,1044	0/0:99,0:99:99:0,298,4134	0/0:92,0:92:99:0,277,3842	0/0:180,0:180:99:0,542,7517	1/1:0,115:115:99:4802,346,0	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:159,0:159:99:0,479,6640	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:146,0:146:99:0,439,6097	0/0:152,0:152:99:0,458,6348	0/0:148,0:148:99:0,445,6181	0/0:164,0:164:99:0,494,6849	0/0:163,0:163:99:0,491,6807	0/0:20,0:20:60.20:0,60,835	0/0:23,0:23:69.23:0,69,960
gi|293339394|gb|GU595196.1|	100326	.	T	C	5178.30	.	AC=6;AF=0.158;AN=38;BaseQRankSum=0.757;DP=2627;Dels=0.00;FS=0.329;HRun=0;HaplotypeScore=0.3684;InbreedingCoeff=0.9656;MQ=254.00;MQ0=0;MQRankSum=0.660;QD=41.76;ReadPosRankSum=-1.309;SB=-2536.11	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	1/1:0,4:4:12.04:167,12,0	./.	0/0:97,0:97:99:0,292,4051	0/0:99,0:99:99:0,298,4134	0/0:171,0:171:99:0,515,7141	1/1:0,117:117:99:4886,352,0	0/0:176,0:176:99:0,530,7350	0/0:160,0:160:99:0,482,6682	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:175,0:175:99:0,527,7308	0/0:144,0:144:99:0,433,6013	0/0:152,0:152:99:0,458,6348	0/0:146,0:146:99:0,439,6097	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	1/1:0,3:3:9.03:125,9,0	./.
gi|293339394|gb|GU595196.1|	100328	.	A	T	179.19	.	AC=4;AF=0.105;AN=38;BaseQRankSum=-0.000;DP=2647;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.6315;InbreedingCoeff=0.9233;MQ=254.00;MQ0=0;MQRankSum=0.213;QD=29.86;ReadPosRankSum=-3.959;SB=-117.68	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	./.	1/1:0,2:2:6.02:84,6,0	0/0:94,0:94:99:0,283,3925	0/0:102,0:102:99:0,307,4260	0/0:178,0:178:99:0,536,7433	0/0:111,0:111:99:0,334,4635	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:182,0:182:99:0,548,7600	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:179,0:179:99:0,539,7475	0/0:154,0:154:99:0,464,6431	0/0:156,0:156:99:0,470,6515	0/0:151,0:151:99:0,455,6306	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	./.	1/1:0,4:4:12.04:167,12,0
gi|293339394|gb|GU595196.1|	100331	.	G	A	975.76	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.244;DP=2683;Dels=0.00;FS=0.000;HRun=3;HaplotypeScore=1.5236;InbreedingCoeff=0.9492;MQ=254.00;MQ0=0;MQRankSum=0.734;QD=37.53;ReadPosRankSum=-7.530;SB=-524.94	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	1/1:0,3:3:9.03:125,9,0	1/1:0,7:7:21.07:292,21,0	0/0:90,0:90:99:0,271,3758	0/0:111,0:111:99:0,334,4635	0/0:181,0:181:99:0,545,7559	0/0:110,0:110:99:0,331,4594	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:148,0:148:99:0,445,6181	0/0:157,0:157:99:0,473,6556	0/0:152,0:152:99:0,458,6348	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	1/1:0,2:2:6.02:84,6,0	1/1:0,14:14:42.14:585,42,0
gi|293339394|gb|GU595196.1|	100364	.	G	C	2836.73	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.105;DP=2826;Dels=0.00;FS=8.346;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.785;QD=40.52;ReadPosRankSum=2.440;SB=-1211.07	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	1/1:0,44:44:99:1837,132,0	0/0:58,0:58:99:0,175,2422	0/0:80,0:80:99:0,241,3341	0/0:112,0:112:99:0,337,4677	0/0:197,0:197:99:0,593,8227	0/0:82,0:82:99:0,247,3424	0/0:179,0:179:99:0,539,7475	0/0:148,0:148:99:0,445,6181	0/0:178,0:178:99:0,536,7433	0/0:155,0:155:99:0,467,6473	0/0:171,0:171:99:0,515,7141	0/0:202,0:202:99:0,608,8436	0/0:160,0:160:99:0,482,6682	0/0:141,0:141:99:0,424,5888	0/0:147,0:147:99:0,442,6139	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	1/1:0,26:26:78.26:1086,78,0	0/0:73,0:73:99:0,220,3049
gi|293339394|gb|GU595196.1|	100397	.	A	G	10398.34	.	AC=8;AF=0.190;AN=42;BaseQRankSum=1.638;DP=2965;Dels=0.00;FS=33.597;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.653;QD=41.76;ReadPosRankSum=-1.870;SB=-4009.01	GT:AD:DP:GQ:PL	0/0:209,0:209:99:0,629,8728	0/0:170,0:170:99:0,512,7099	1/1:0,57:57:99:2380,172,0	1/1:0,79:79:99:3299,238,0	0/0:76,0:76:99:0,229,3174	0/0:106,0:106:99:0,319,4427	0/0:194,0:194:99:0,584,8102	0/0:76,0:76:99:0,229,3174	0/0:175,0:175:99:0,527,7308	0/0:178,0:178:99:0,536,7433	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:200,0:200:99:0,602,8352	0/0:171,0:171:99:0,515,7141	0/0:144,0:144:99:0,433,6013	0/0:166,0:166:99:0,500,6932	0/0:183,0:183:99:0,551,7642	0/0:159,0:159:99:0,479,6640	1/1:0,33:33:99:1378,99,0	1/1:0,80:80:99:3341,241,0
gi|293339394|gb|GU595196.1|	100427	.	C	G	9521.37	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.012;DP=2933;Dels=0.00;FS=12.058;HRun=0;HaplotypeScore=9.7606;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.100;QD=41.76;ReadPosRankSum=0.234;SB=-4009.01	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:178,0:178:99:0,536,7433	1/1:0,65:65:99:2714,196,0	1/1:0,60:60:99:2506,181,0	0/0:85,0:85:99:0,256,3550	0/0:120,0:120:99:0,361,5011	0/0:181,0:181:99:0,545,7559	0/0:110,0:110:99:0,331,4594	0/0:170,0:170:99:0,512,7099	0/0:171,0:171:99:0,515,7141	0/0:141,0:141:99:0,424,5888	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:155,0:155:99:0,467,6473	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	1/1:0,28:28:84.28:1169,84,0	1/1:0,75:75:99:3132,226,0
gi|293339394|gb|GU595196.1|	100430	.	G	A	4593.66	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.423;DP=2936;Dels=0.00;FS=68.217;HRun=0;HaplotypeScore=10.3320;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.318;QD=41.76;ReadPosRankSum=2.217;SB=-1085.79	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:65,0:65:99:0,196,2714	0/0:63,0:63:99:0,190,2631	0/0:88,0:88:99:0,265,3675	0/0:118,0:118:99:0,355,4928	0/0:181,0:181:99:0,545,7559	1/1:0,110:110:99:4594,331,0	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:135,0:135:99:0,406,5638	0/0:182,0:182:99:0,548,7600	0/0:175,0:175:99:0,527,7308	0/0:175,0:175:99:0,527,7308	0/0:182,0:182:99:0,548,7600	0/0:155,0:155:99:0,467,6473	0/0:157,0:157:99:0,473,6556	0/0:190,0:190:99:0,572,7934	0/0:176,0:176:99:0,530,7350	0/0:30,0:30:90.30:0,90,1253	0/0:67,0:67:99:0,202,2798
gi|293339394|gb|GU595196.1|	100433	.	T	C	4844.22	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.001;DP=2939;Dels=0.00;FS=74.437;HRun=0;HaplotypeScore=10.6176;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.341;QD=41.76;ReadPosRankSum=1.824;SB=-1127.55	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:69,0:69:99:0,208,2881	0/0:63,0:63:99:0,190,2631	0/0:92,0:92:99:0,277,3842	0/0:117,0:117:99:0,352,4886	0/0:188,0:188:99:0,566,7851	1/1:0,116:116:99:4844,349,0	0/0:175,0:175:99:0,527,7308	0/0:177,0:177:99:0,533,7392	0/0:141,0:141:99:0,424,5888	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	0/0:150,0:150:99:0,452,6264	0/0:150,0:150:99:0,452,6264	0/0:188,0:188:99:0,566,7851	0/0:176,0:176:99:0,530,7350	0/0:28,0:28:84.28:0,84,1169	0/0:69,0:69:99:0,208,2881
gi|293339394|gb|GU595196.1|	100493	.	T	C	4259.57	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.266;DP=3018;Dels=0.00;FS=37.528;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.288;QD=41.76;ReadPosRankSum=0.119;SB=-1419.87	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	0/0:75,0:75:99:0,226,3132	0/0:73,0:73:99:0,220,3049	0/0:99,0:99:99:0,298,4134	0/0:107,0:107:99:0,322,4468	0/0:186,0:186:99:0,560,7767	1/1:0,102:102:99:4260,307,0	0/0:156,0:156:99:0,470,6515	0/0:171,0:171:99:0,515,7141	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:218,0:218:99:0,656,9104	0/0:170,0:170:99:0,512,7099	0/0:181,0:181:99:0,545,7559	0/0:140,0:140:99:0,421,5846	0/0:166,0:166:99:0,500,6932	0/0:156,0:156:99:0,470,6515	0/0:181,0:181:99:0,545,7559	0/0:41,0:41:99:0,123,1712	0/0:107,0:107:99:0,322,4468
gi|293339394|gb|GU595196.1|	100517	.	T	C	9229.05	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.693;DP=2979;Dels=0.00;FS=53.173;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.834;QD=41.76;ReadPosRankSum=4.142;SB=-3090.28	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:188,0:188:99:0,566,7851	1/1:0,51:51:99:2130,154,0	1/1:0,54:54:99:2255,163,0	0/0:99,0:99:99:0,298,4134	0/0:106,0:106:99:0,319,4427	0/0:184,0:184:99:0,554,7684	0/0:119,0:119:99:0,358,4969	0/0:167,0:167:99:0,503,6974	0/0:187,0:187:99:0,563,7809	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	0/0:191,0:191:99:0,575,7976	0/0:179,0:179:99:0,539,7475	0/0:187,0:187:99:0,563,7809	0/0:146,0:146:99:0,439,6097	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:185,0:185:99:0,557,7726	1/1:0,36:36:99:1503,108,0	1/1:0,80:80:99:3341,241,0
gi|293339394|gb|GU595196.1|	100547	.	A	G	9020.25	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.825;DP=2945;Dels=0.00;FS=21.467;HRun=3;HaplotypeScore=4.5232;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.065;QD=41.76;ReadPosRankSum=6.026;SB=-3674.93	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:194,0:194:99:0,584,8102	1/1:0,57:57:99:2380,172,0	1/1:0,69:69:99:2881,208,0	0/0:87,0:87:99:0,262,3633	0/0:106,0:106:99:0,319,4427	0/0:182,0:182:99:0,548,7600	0/0:102,0:102:99:0,307,4260	0/0:186,0:186:99:0,560,7767	0/0:184,0:184:99:0,554,7684	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:192,0:192:99:0,578,8018	0/0:153,0:153:99:0,461,6389	0/0:171,0:171:99:0,515,7141	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	1/1:0,29:29:87.29:1211,87,0	1/1:0,61:61:99:2547,184,0
gi|293339394|gb|GU595196.1|	100550	.	C	A	3967.25	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.088;DP=2898;Dels=0.00;FS=12.161;HRun=0;HaplotypeScore=4.5232;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.019;QD=41.76;ReadPosRankSum=2.019;SB=-1628.67	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:189,0:189:99:0,569,7893	0/0:51,0:51:99:0,154,2130	0/0:60,0:60:99:0,181,2506	0/0:83,0:83:99:0,250,3466	0/0:102,0:102:99:0,307,4260	0/0:180,0:180:99:0,542,7517	1/1:0,95:95:99:3967,286,0	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:194,0:194:99:0,584,8102	0/0:155,0:155:99:0,467,6473	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:24,0:24:72.24:0,72,1002	0/0:57,0:57:99:0,172,2380
gi|293339394|gb|GU595196.1|	100553	.	C	T	6890.47	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.034;DP=2864;Dels=0.00;FS=17.015;HRun=2;HaplotypeScore=4.3328;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-3.328;QD=41.76;ReadPosRankSum=12.190;SB=-2797.96	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:186,0:186:99:0,560,7767	1/1:0,42:42:99:1754,126,0	1/1:0,57:57:99:2380,172,0	0/0:79,0:79:99:0,238,3299	0/0:103,0:103:99:0,310,4301	0/0:184,0:184:99:0,554,7684	0/0:91,0:91:99:0,274,3800	0/0:187,0:187:99:0,563,7809	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:160,0:160:99:0,482,6682	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:190,0:190:99:0,572,7934	0/0:159,0:159:99:0,479,6640	0/0:167,0:167:99:0,503,6974	0/0:155,0:155:99:0,467,6473	0/0:171,0:171:99:0,515,7141	1/1:0,20:20:60.20:835,60,0	1/1:0,46:46:99:1921,138,0
gi|293339394|gb|GU595196.1|	100583	.	T	A	232.22	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.060;DP=2621;Dels=0.00;FS=1.396;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8859;MQ=254.00;MQ0=0;MQRankSum=-0.569;QD=33.17;ReadPosRankSum=-3.919;SB=-119.43	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:143,0:143:99:0,430,5972	0/0:4,0:4:12.04:0,12,167	0/0:3,0:3:9.03:0,9,125	0/0:75,0:75:99:0,226,3132	0/0:95,0:95:99:0,286,3967	0/0:175,0:175:99:0,527,7308	1/1:0,7:7:21.07:292,21,0	0/0:169,0:169:99:0,509,7057	0/0:193,0:193:99:0,581,8060	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:159,0:159:99:0,479,6640	0/0:170,0:170:99:0,512,7099	0/0:193,0:193:99:0,581,8060	0/0:188,0:188:99:0,566,7851	0/0:189,0:189:99:0,569,7893	0/0:166,0:166:99:0,500,6932	0/0:4,0:4:12.04:0,12,167	0/0:8,0:8:24.08:0,24,334
gi|293339394|gb|GU595196.1|	100628	.	T	C	7224.56	.	AC=2;AF=0.063;AN=32;BaseQRankSum=-0.876;DP=2670;Dels=0.00;FS=6.798;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.027;QD=41.76;ReadPosRankSum=0.214;SB=-3215.56	GT:AD:DP:GQ:PL	0/0:208,0:208:99:0,626,8686	0/0:170,0:170:99:0,512,7099	./.	./.	0/0:97,0:97:99:0,292,4051	0/0:104,0:104:99:0,313,4343	0/0:194,0:194:99:0,584,8102	./.	0/0:159,0:159:99:0,479,6640	0/0:180,0:180:99:0,542,7517	0/0:166,0:166:99:0,500,6932	0/0:183,0:183:99:0,551,7642	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:148,0:148:99:0,445,6181	1/1:0,173:173:99:7225,521,0	0/0:191,0:191:99:0,575,7976	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	./.	./.
gi|293339394|gb|GU595196.1|	100640	.	G	T	4927.74	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.546;DP=2806;Dels=0.00;FS=5.217;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=0.627;QD=41.76;ReadPosRankSum=-11.808;SB=-2213.30	GT:AD:DP:GQ:PL	0/0:211,0:211:99:0,635,8811	0/0:176,0:176:99:0,530,7350	1/1:0,21:21:63.21:877,63,0	1/1:0,20:20:60.20:835,60,0	0/0:87,0:87:99:0,262,3633	0/0:103,0:103:99:0,310,4301	0/0:189,0:189:99:0,569,7893	1/1:0,37:37:99:1545,111,0	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	0/0:177,0:177:99:0,533,7392	0/0:177,0:177:99:0,533,7392	0/0:188,0:188:99:0,566,7851	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:186,0:186:99:0,560,7767	0/0:158,0:158:99:0,476,6598	0/0:172,0:172:99:0,518,7183	1/1:0,8:8:24.08:334,24,0	1/1:0,32:32:96.32:1336,96,0
gi|293339394|gb|GU595196.1|	100643	.	T	C	6598.15	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.090;DP=2837;Dels=0.00;FS=11.464;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.575;QD=41.76;ReadPosRankSum=-11.108;SB=-2797.96	GT:AD:DP:GQ:PL	0/0:209,0:209:99:0,629,8728	0/0:181,0:181:99:0,545,7559	1/1:0,27:27:81.27:1128,81,0	1/1:0,29:29:87.29:1211,87,0	0/0:84,0:84:99:0,253,3508	0/0:103,0:103:99:0,310,4301	0/0:186,0:186:99:0,560,7767	1/1:0,47:47:99:1963,141,0	0/0:166,0:166:99:0,500,6932	0/0:180,0:180:99:0,542,7517	0/0:179,0:179:99:0,539,7475	0/0:184,0:184:99:0,554,7684	0/0:189,0:189:99:0,569,7893	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	0/0:173,0:173:99:0,521,7225	1/1:0,12:12:36.12:501,36,0	1/1:0,43:43:99:1796,129,0
gi|293339394|gb|GU595196.1|	100694	.	C	T	14282.05	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.903;DP=3069;Dels=0.00;FS=23.973;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.462;QD=41.76;ReadPosRankSum=4.026;SB=-5637.66	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:158,0:158:99:0,476,6598	0/0:71,0:71:99:0,214,2965	1/1:0,111:111:99:4635,334,0	0/0:105,0:105:99:0,316,4385	0/0:109,0:109:99:0,328,4552	0/0:183,0:183:99:0,551,7642	1/1:0,105:105:99:4385,316,0	0/0:155,0:155:99:0,467,6473	0/0:185,0:185:99:0,557,7726	0/0:156,0:156:99:0,470,6515	0/0:176,0:176:99:0,530,7350	0/0:152,0:152:99:0,458,6348	0/0:183,0:183:99:0,551,7642	0/0:175,0:175:99:0,527,7308	0/0:160,0:160:99:0,482,6682	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:180,0:180:99:0,542,7517	0/0:54,0:54:99:0,163,2255	1/1:0,126:126:99:5262,379,0
gi|293339394|gb|GU595196.1|	100718	.	G	A	1649.83	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-2.075;DP=2952;Dels=0.00;FS=2.730;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.426;QD=40.24;ReadPosRankSum=-2.803;SB=-709.94	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:179,0:179:99:0,539,7475	0/0:60,0:60:99:0,181,2506	0/0:80,0:80:99:0,241,3341	0/0:107,0:107:99:0,322,4468	0/0:108,0:108:99:0,325,4510	0/0:174,0:174:99:0,524,7266	1/1:0,41:41:99:1712,123,0	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:149,0:149:99:0,448,6222	0/0:188,0:188:99:0,566,7851	0/0:152,0:152:99:0,458,6348	0/0:193,0:193:99:0,581,8060	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	0/0:185,0:185:99:0,557,7726	0/0:172,0:172:99:0,518,7183	0/0:40,0:40:99:0,120,1670	0/0:104,0:104:99:0,313,4343
gi|293339394|gb|GU595196.1|	100736	.	A	G	6347.59	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.005;DP=2707;Dels=0.00;FS=72.522;HRun=2;HaplotypeScore=3.3496;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.996;QD=41.76;ReadPosRankSum=-0.096;SB=-1628.67	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	1/1:0,50:50:99:2088,151,0	1/1:0,29:29:87.29:1211,87,0	0/0:88,0:88:99:0,265,3675	0/0:111,0:111:99:0,334,4635	0/0:171,0:171:99:0,515,7141	./.	0/0:159,0:159:99:0,479,6640	0/0:179,0:179:99:0,539,7475	0/0:142,0:142:99:0,427,5930	0/0:185,0:185:99:0,557,7726	0/0:148,0:148:99:0,445,6181	0/0:192,0:192:99:0,578,8018	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	1/1:0,25:25:75.25:1044,75,0	1/1:0,48:48:99:2004,144,0
gi|293339394|gb|GU595196.1|	100739	.	C	T	2754.09	.	AC=4;AF=0.100;AN=40;BaseQRankSum=0.592;DP=2689;Dels=0.00;FS=14.432;HRun=0;HaplotypeScore=3.3496;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.174;QD=40.50;ReadPosRankSum=0.275;SB=-960.51	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	0/0:47,0:47:99:0,141,1963	1/1:0,25:25:75.25:1044,75,0	0/0:90,0:90:99:0,271,3758	0/0:104,0:104:99:0,313,4343	0/0:172,0:172:99:0,518,7183	./.	0/0:158,0:158:99:0,476,6598	0/0:179,0:179:99:0,539,7475	0/0:142,0:142:99:0,427,5930	0/0:190,0:190:99:0,572,7934	0/0:152,0:152:99:0,458,6348	0/0:192,0:192:99:0,578,8018	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	0/0:166,0:166:99:0,500,6932	0/0:154,0:154:99:0,464,6431	0/0:25,0:25:75.25:0,75,1044	1/1:0,43:43:99:1796,129,0
gi|293339394|gb|GU595196.1|	100755	.	C	A	438.87	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.803;DP=2668;Dels=0.00;FS=32.061;HRun=0;HaplotypeScore=0.5714;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.000;QD=36.57;ReadPosRankSum=-3.401;SB=-0.02	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:176,0:176:99:0,530,7350	0/0:36,0:36:99:0,108,1503	0/0:22,0:22:66.22:0,66,919	0/0:86,0:86:99:0,259,3591	0/0:108,0:108:99:0,325,4510	0/0:161,0:161:99:0,485,6723	1/1:0,12:12:36.12:501,36,0	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:151,0:151:99:0,455,6306	0/0:183,0:183:99:0,551,7642	0/0:164,0:164:99:0,494,6849	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:157,0:157:99:0,473,6556	0/0:19,0:19:57.19:0,57,793	0/0:28,0:28:84.28:0,84,1169
gi|293339394|gb|GU595196.1|	100763	.	C	A	4635.42	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.573;DP=2668;Dels=0.00;FS=97.782;HRun=0;HaplotypeScore=0.5714;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.098;QD=41.76;ReadPosRankSum=0.250;SB=-876.95	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:180,0:180:99:0,542,7517	1/1:0,32:32:96.32:1336,96,0	1/1:0,25:25:75.25:1044,75,0	0/0:85,0:85:99:0,256,3550	0/0:100,0:100:99:0,301,4176	0/0:165,0:165:99:0,497,6890	1/1:0,17:17:51.17:710,51,0	0/0:186,0:186:99:0,560,7767	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:165,0:165:99:0,497,6890	0/0:165,0:165:99:0,497,6890	0/0:189,0:189:99:0,569,7893	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	1/1:0,16:16:48.16:668,48,0	1/1:0,21:21:63.21:877,63,0
gi|293339394|gb|GU595196.1|	100856	.	C	G	260.22	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.050;DP=2746;Dels=0.00;FS=20.773;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8979;MQ=254.00;MQ0=0;MQRankSum=-0.642;QD=32.53;ReadPosRankSum=-3.471;SB=-0.02	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	1/1:0,7:7:21.07:292,21,0	0/0:35,0:35:99:0,105,1462	0/0:102,0:102:99:0,307,4260	0/0:101,0:101:99:0,304,4218	0/0:210,0:210:99:0,632,8770	0/0:40,0:40:99:0,120,1670	0/0:182,0:182:99:0,548,7600	0/0:174,0:174:99:0,524,7266	0/0:201,0:201:99:0,605,8394	0/0:162,0:162:99:0,488,6765	0/0:143,0:143:99:0,430,5972	0/0:182,0:182:99:0,548,7600	0/0:145,0:145:99:0,436,6055	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:175,0:175:99:0,527,7308	1/1:0,1:1:3.01:42,3,0	0/0:40,0:40:99:0,120,1670
gi|293339394|gb|GU595196.1|	100863	.	G	T	217.99	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.254;DP=2761;Dels=0.00;FS=17.707;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9329;MQ=254.00;MQ0=0;MQRankSum=0.158;QD=31.14;ReadPosRankSum=-3.250;SB=-0.02	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:162,0:162:99:0,488,6765	1/1:0,5:5:15.05:209,15,0	0/0:39,0:39:99:0,117,1629	0/0:97,0:97:99:0,292,4051	0/0:95,0:95:99:0,286,3967	0/0:210,0:210:99:0,632,8770	0/0:36,0:36:99:0,108,1503	0/0:187,0:187:99:0,563,7809	0/0:175,0:175:99:0,527,7308	0/0:197,0:197:99:0,593,8227	0/0:167,0:167:99:0,503,6974	0/0:151,0:151:99:0,455,6306	0/0:190,0:190:99:0,572,7934	0/0:145,0:145:99:0,436,6055	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	1/1:0,2:2:6.02:84,6,0	0/0:44,0:44:99:0,132,1837
gi|293339394|gb|GU595196.1|	100865	.	T	A	217.29	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.796;DP=2740;Dels=0.00;FS=17.602;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9512;MQ=254.00;MQ0=0;MQRankSum=-0.716;QD=31.04;ReadPosRankSum=-2.550;SB=-0.02	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:160,0:160:99:0,482,6682	1/1:0,4:4:12.04:167,12,0	0/0:36,0:36:99:0,108,1503	0/0:97,0:97:99:0,292,4051	0/0:96,0:96:99:0,289,4009	0/0:204,0:204:99:0,614,8519	0/0:37,0:37:99:0,111,1545	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:191,0:191:99:0,575,7976	0/0:160,0:160:99:0,482,6682	0/0:147,0:147:99:0,442,6139	0/0:186,0:186:99:0,560,7767	0/0:154,0:154:99:0,464,6431	0/0:174,0:174:99:0,524,7266	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	0/0:178,0:178:99:0,536,7433	1/1:0,3:3:9.03:125,9,0	0/0:47,0:47:99:0,141,1963
gi|293339394|gb|GU595196.1|	100926	.	G	A	634.44	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.615;DP=2550;Dels=0.00;FS=56.006;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9210;MQ=254.00;MQ0=0;MQRankSum=-0.426;QD=35.25;ReadPosRankSum=-6.455;SB=-0.02	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:147,0:147:99:0,442,6139	1/1:0,3:3:9.03:125,9,0	1/1:0,4:4:12.04:167,12,0	0/0:88,0:88:99:0,265,3675	0/0:109,0:109:99:0,328,4552	0/0:198,0:198:99:0,596,8269	1/1:0,1:1:3.01:42,3,0	0/0:153,0:153:99:0,461,6389	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	0/0:185,0:185:99:0,557,7726	0/0:155,0:155:99:0,467,6473	0/0:177,0:177:99:0,533,7392	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:159,0:159:99:0,479,6640	1/1:0,6:6:18.06:251,18,0	1/1:0,4:4:12.04:167,12,0
gi|293339394|gb|GU595196.1|	100927	.	T	G	439.61	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-2.379;DP=2545;Dels=0.00;FS=40.325;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9261;MQ=254.00;MQ0=0;MQRankSum=-0.198;QD=33.82;ReadPosRankSum=-5.728;SB=-0.02	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:145,0:145:99:0,436,6055	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	0/0:88,0:88:99:0,265,3675	0/0:111,0:111:99:0,334,4635	0/0:199,0:199:99:0,599,8310	./.	0/0:153,0:153:99:0,461,6389	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	0/0:186,0:186:99:0,560,7767	0/0:154,0:154:99:0,464,6431	0/0:174,0:174:99:0,524,7266	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:157,0:157:99:0,473,6556	1/1:0,5:5:15.05:209,15,0	1/1:0,3:3:9.03:125,9,0
gi|293339394|gb|GU595196.1|	102785	.	T	A	1503.19	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.521;DP=2525;Dels=0.00;FS=118.226;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.179;QD=39.56;ReadPosRankSum=-2.388;SB=-0.02	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:165,0:165:99:0,497,6890	1/1:0,23:23:69.23:960,69,0	./.	0/0:87,0:87:99:0,262,3633	0/0:93,0:93:99:0,280,3884	0/0:171,0:171:99:0,515,7141	./.	0/0:171,0:171:99:0,515,7141	0/0:153,0:153:99:0,461,6389	0/0:147,0:147:99:0,442,6139	0/0:171,0:171:99:0,515,7141	0/0:186,0:186:99:0,560,7767	0/0:150,0:150:99:0,452,6264	0/0:172,0:172:99:0,518,7183	0/0:141,0:141:99:0,424,5888	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	1/1:0,15:15:45.15:626,45,0	./.
gi|293339394|gb|GU595196.1|	102791	.	C	A	2547.20	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.495;DP=2543;Dels=0.00;FS=193.842;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.010;QD=40.43;ReadPosRankSum=-2.070;SB=-0.02	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:167,0:167:99:0,503,6974	1/1:0,36:36:99:1503,108,0	./.	0/0:81,0:81:99:0,244,3383	0/0:87,0:87:99:0,262,3633	0/0:165,0:165:99:0,497,6890	./.	0/0:167,0:167:99:0,503,6974	0/0:154,0:154:99:0,464,6431	0/0:158,0:158:99:0,476,6598	0/0:180,0:180:99:0,542,7517	0/0:179,0:179:99:0,539,7475	0/0:149,0:149:99:0,448,6222	0/0:165,0:165:99:0,497,6890	0/0:141,0:141:99:0,424,5888	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	1/1:0,27:27:81.27:1128,81,0	./.
gi|293339394|gb|GU595196.1|	102838	.	T	C	4885.98	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-1.637;DP=2646;Dels=0.00;FS=348.894;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.233;QD=41.76;ReadPosRankSum=0.848;SB=-0.02	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:139,0:139:99:0,418,5805	1/1:0,71:71:99:2965,214,0	./.	0/0:76,0:76:99:0,229,3174	0/0:105,0:105:99:0,316,4385	0/0:183,0:183:99:0,551,7642	./.	0/0:149,0:149:99:0,448,6222	0/0:159,0:159:99:0,479,6640	0/0:192,0:192:99:0,578,8018	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	0/0:191,0:191:99:0,575,7976	0/0:166,0:166:99:0,500,6932	0/0:153,0:153:99:0,461,6389	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	1/1:0,46:46:99:1921,138,0	./.
gi|293339394|gb|GU595196.1|	102860	.	T	A	3716.69	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.916;DP=2679;Dels=0.00;FS=268.418;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.155;QD=41.76;ReadPosRankSum=0.319;SB=-0.02	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:151,0:151:99:0,455,6306	1/1:0,54:54:99:2255,163,0	./.	0/0:96,0:96:99:0,289,4009	0/0:111,0:111:99:0,334,4635	0/0:181,0:181:99:0,545,7559	./.	0/0:161,0:161:99:0,485,6723	0/0:151,0:151:99:0,455,6306	0/0:179,0:179:99:0,539,7475	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:188,0:188:99:0,566,7851	0/0:157,0:157:99:0,473,6556	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	1/1:0,35:35:99:1462,105,0	./.
gi|293339394|gb|GU595196.1|	102884	.	T	C	1127.37	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.994;DP=2519;Dels=0.00;FS=84.821;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.193;QD=38.87;ReadPosRankSum=-2.048;SB=-0.02	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	1/1:0,17:17:51.17:710,51,0	./.	0/0:97,0:97:99:0,292,4051	0/0:109,0:109:99:0,328,4552	0/0:169,0:169:99:0,509,7057	./.	0/0:178,0:178:99:0,536,7433	0/0:147,0:147:99:0,442,6139	0/0:153,0:153:99:0,461,6389	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:149,0:149:99:0,448,6222	0/0:180,0:180:99:0,542,7517	0/0:156,0:156:99:0,470,6515	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	1/1:0,12:12:36.12:501,36,0	./.
gi|293339394|gb|GU595196.1|	102896	.	G	T	1417.90	.	AC=4;AF=0.100;AN=40;BaseQRankSum=1.476;DP=2571;Dels=0.00;FS=106.429;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9658;MQ=254.00;MQ0=0;MQRankSum=-0.777;QD=39.39;ReadPosRankSum=-5.457;SB=-0.02	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:156,0:156:99:0,470,6515	0/0:6,0:6:18.06:0,18,251	1/1:0,15:15:45.15:626,45,0	0/0:100,0:100:99:0,301,4176	0/0:109,0:109:99:0,328,4552	0/0:174,0:174:99:0,524,7266	./.	0/0:176,0:176:99:0,530,7350	0/0:144,0:144:99:0,433,6013	0/0:160,0:160:99:0,482,6682	0/0:183,0:183:99:0,551,7642	0/0:162,0:162:99:0,488,6765	0/0:152,0:152:99:0,458,6348	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:3,0:3:9.03:0,9,125	1/1:0,21:21:63.21:877,63,0
gi|293339394|gb|GU595196.1|	102901	.	C	T	1920.79	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-1.514;DP=2552;Dels=0.00;FS=142.083;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.095;QD=40.02;ReadPosRankSum=-3.711;SB=-0.02	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	./.	1/1:0,17:17:51.17:710,51,0	0/0:104,0:104:99:0,313,4343	0/0:102,0:102:99:0,307,4260	0/0:170,0:170:99:0,512,7099	./.	0/0:170,0:170:99:0,512,7099	0/0:141,0:141:99:0,424,5888	0/0:159,0:159:99:0,479,6640	0/0:185,0:185:99:0,557,7726	0/0:157,0:157:99:0,473,6556	0/0:142,0:142:99:0,427,5930	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	./.	1/1:0,31:31:93.31:1295,93,0
gi|293339394|gb|GU595196.1|	102905	.	G	A	207.73	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.915;DP=2585;Dels=0.00;FS=3.426;HRun=0;HaplotypeScore=0.3333;InbreedingCoeff=0.8828;MQ=254.00;MQ0=0;MQRankSum=1.093;QD=29.68;ReadPosRankSum=-3.884;SB=-78.44	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:164,0:164:99:0,494,6849	1/1:0,3:3:9.03:125,9,0	0/0:26,0:26:78.26:0,78,1086	0/0:99,0:99:99:0,298,4134	0/0:100,0:100:99:0,301,4176	0/0:176,0:176:99:0,530,7350	1/1:0,3:3:9.03:125,9,0	0/0:179,0:179:99:0,539,7475	0/0:150,0:150:99:0,452,6264	0/0:159,0:159:99:0,479,6640	0/0:187,0:187:99:0,563,7809	0/0:159,0:159:99:0,479,6640	0/0:142,0:142:99:0,427,5930	0/0:184,0:184:99:0,554,7684	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	0/0:160,0:160:99:0,482,6682	1/1:0,1:1:3.01:42,3,0	0/0:36,0:36:99:0,108,1503
gi|293339394|gb|GU595196.1|	102932	.	T	C	3194.11	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.823;DP=2851;Dels=0.00;FS=92.182;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.578;QD=40.43;ReadPosRankSum=2.109;SB=-417.62	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	1/1:0,40:40:99:1670,120,0	0/0:78,0:78:99:0,235,3257	0/0:90,0:90:99:0,271,3758	0/0:104,0:104:99:0,313,4343	0/0:193,0:193:99:0,581,8060	1/1:0,18:18:54.18:752,54,0	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:154,0:154:99:0,464,6431	0/0:188,0:188:99:0,566,7851	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:181,0:181:99:0,545,7559	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	1/1:0,21:21:63.21:877,63,0	0/0:90,0:90:99:0,271,3758
gi|293339394|gb|GU595196.1|	102956	.	G	A	13572.13	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.312;DP=2987;Dels=0.00;FS=454.950;HRun=4;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.892;QD=41.76;ReadPosRankSum=-1.739;SB=-1252.83	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:178,0:178:99:0,536,7433	1/1:0,67:67:99:2798,202,0	1/1:0,92:92:99:3842,277,0	0/0:102,0:102:99:0,307,4260	0/0:120,0:120:99:0,361,5011	0/0:187,0:187:99:0,563,7809	1/1:0,21:21:63.21:877,63,0	0/0:187,0:187:99:0,563,7809	0/0:179,0:179:99:0,539,7475	0/0:150,0:150:99:0,452,6264	0/0:184,0:184:99:0,554,7684	0/0:162,0:162:99:0,488,6765	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:154,0:154:99:0,464,6431	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	0/0:197,0:197:99:0,593,8227	1/1:0,52:52:99:2172,157,0	1/1:0,93:93:99:3884,280,0
gi|293339394|gb|GU595196.1|	103007	.	G	A	5428.86	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.618;DP=2722;Dels=0.00;FS=13.202;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9958;MQ=254.00;MQ0=0;MQRankSum=1.015;QD=41.76;ReadPosRankSum=2.054;SB=-2336.32	GT:AD:DP:GQ:PL	0/0:191,0:191:99:0,575,7976	0/0:169,0:169:99:0,509,7057	1/1:0,77:77:99:3216,232,0	0/0:41,0:41:99:0,123,1712	0/0:83,0:83:99:0,250,3466	0/0:113,0:113:99:0,340,4719	0/0:173,0:173:99:0,521,7225	0/0:6,0:6:18.06:0,18,251	0/0:152,0:152:99:0,458,6348	0/0:153,0:153:99:0,461,6389	0/0:145,0:145:99:0,436,6055	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	0/0:149,0:149:99:0,448,6222	0/0:183,0:183:99:0,551,7642	0/0:145,0:145:99:0,436,6055	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	1/1:0,53:53:99:2213,160,0	0/0:44,0:44:99:0,132,1837
gi|293339394|gb|GU595196.1|	103076	.	C	T	10815.95	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.341;DP=2897;Dels=0.00;FS=12.311;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.319;QD=41.76;ReadPosRankSum=-0.289;SB=-4635.41	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:144,0:144:99:0,433,6013	1/1:0,66:66:99:2756,199,0	1/1:0,58:58:99:2422,175,0	0/0:93,0:93:99:0,280,3884	0/0:96,0:96:99:0,289,4009	0/0:164,0:164:99:0,494,6849	0/0:19,0:19:57.19:0,57,793	0/0:172,0:172:99:0,518,7183	0/0:194,0:194:99:0,584,8102	0/0:178,0:178:99:0,536,7433	0/0:205,0:205:99:0,617,8561	0/0:179,0:179:99:0,539,7475	0/0:180,0:180:99:0,542,7517	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	1/1:0,54:54:99:2255,163,0	1/1:0,81:81:99:3383,244,0
gi|293339394|gb|GU595196.1|	103112	.	G	C	15159.02	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.646;DP=3016;Dels=0.00;FS=11.883;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.133;QD=41.76;ReadPosRankSum=-0.626;SB=-6806.95	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	1/1:0,81:81:99:3383,244,0	1/1:0,101:101:99:4218,304,0	0/0:112,0:112:99:0,337,4677	0/0:109,0:109:99:0,328,4552	0/0:183,0:183:99:0,551,7642	0/0:31,0:31:93.31:0,93,1295	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:195,0:195:99:0,587,8143	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:155,0:155:99:0,467,6473	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	1/1:0,68:68:99:2840,205,0	1/1:0,113:113:99:4719,340,0
gi|293339394|gb|GU595196.1|	103139	.	T	G	15660.14	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.333;DP=2981;Dels=0.00;FS=7.759;HRun=0;HaplotypeScore=0.5237;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.633;QD=41.76;ReadPosRankSum=3.729;SB=-7182.74	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	1/1:0,70:70:99:2923,211,0	1/1:0,127:127:99:5304,382,0	0/0:118,0:118:99:0,355,4928	0/0:122,0:122:99:0,367,5095	0/0:180,0:180:99:0,542,7517	1/1:0,15:15:45.15:626,45,0	0/0:153,0:153:99:0,461,6389	0/0:179,0:179:99:0,539,7475	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:178,0:178:99:0,536,7433	0/0:193,0:193:99:0,581,8060	0/0:148,0:148:99:0,445,6181	0/0:148,0:148:99:0,445,6181	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	1/1:0,53:53:99:2213,160,0	1/1:0,110:110:99:4594,331,0
gi|293339394|gb|GU595196.1|	103142	.	T	C	397.19	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.152;DP=2970;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.5237;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=0.600;QD=36.11;ReadPosRankSum=-4.178;SB=-205.41	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:68,0:68:99:0,205,2840	0/0:143,0:143:99:0,430,5972	0/0:113,0:113:99:0,340,4719	0/0:124,0:124:99:0,373,5178	0/0:170,0:170:99:0,512,7099	1/1:0,11:11:33.11:459,33,0	0/0:160,0:160:99:0,482,6682	0/0:175,0:175:99:0,527,7308	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:189,0:189:99:0,569,7893	0/0:146,0:146:99:0,439,6097	0/0:147,0:147:99:0,442,6139	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:53,0:53:99:0,160,2213	0/0:114,0:114:99:0,343,4761
gi|293339394|gb|GU595196.1|	103175	.	A	G	13363.33	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.627;DP=2945;Dels=0.00;FS=5.018;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.555;QD=41.76;ReadPosRankSum=10.037;SB=-6305.83	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:150,0:150:99:0,452,6264	1/1:0,49:49:99:2046,147,0	1/1:0,110:110:99:4594,331,0	0/0:96,0:96:99:0,289,4009	0/0:116,0:116:99:0,349,4844	0/0:183,0:183:99:0,551,7642	1/1:0,32:32:96.32:1336,96,0	0/0:179,0:179:99:0,539,7475	0/0:172,0:172:99:0,518,7183	0/0:157,0:157:99:0,473,6556	0/0:208,0:208:99:0,626,8686	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:193,0:193:99:0,581,8060	0/0:185,0:185:99:0,557,7726	0/0:179,0:179:99:0,539,7475	0/0:148,0:148:99:0,445,6181	0/0:171,0:171:99:0,515,7141	1/1:0,37:37:99:1545,111,0	1/1:0,92:92:99:3842,277,0
gi|293339394|gb|GU595196.1|	103184	.	T	C	10064.26	.	AC=10;AF=0.238;AN=42;BaseQRankSum=1.614;DP=2854;Dels=0.00;FS=3.774;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.422;QD=41.76;ReadPosRankSum=6.003;SB=-4760.69	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:159,0:159:99:0,479,6640	1/1:0,36:36:99:1503,108,0	1/1:0,82:82:99:3424,247,0	0/0:88,0:88:99:0,265,3675	0/0:127,0:127:99:0,382,5304	0/0:185,0:185:99:0,557,7726	1/1:0,32:32:96.32:1336,96,0	0/0:172,0:172:99:0,518,7183	0/0:177,0:177:99:0,533,7392	0/0:145,0:145:99:0,436,6055	0/0:200,0:200:99:0,602,8352	0/0:169,0:169:99:0,509,7057	0/0:154,0:154:99:0,464,6431	0/0:183,0:183:99:0,551,7642	0/0:194,0:194:99:0,584,8102	0/0:175,0:175:99:0,527,7308	0/0:149,0:149:99:0,448,6222	0/0:157,0:157:99:0,473,6556	1/1:0,26:26:78.26:1086,78,0	1/1:0,65:65:99:2714,196,0
gi|293339394|gb|GU595196.1|	103208	.	G	C	11150.03	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.319;DP=2924;Dels=0.00;FS=15.390;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.862;QD=41.76;ReadPosRankSum=-1.393;SB=-4844.22	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:155,0:155:99:0,467,6473	1/1:0,60:60:99:2506,181,0	1/1:0,72:72:99:3007,217,0	0/0:104,0:104:99:0,313,4343	0/0:119,0:119:99:0,358,4969	0/0:184,0:184:99:0,554,7684	./.	0/0:166,0:166:99:0,500,6932	0/0:191,0:191:99:0,575,7976	0/0:147,0:147:99:0,442,6139	0/0:209,0:209:99:0,629,8728	0/0:174,0:174:99:0,524,7266	0/0:145,0:145:99:0,436,6055	0/0:188,0:188:99:0,566,7851	0/0:203,0:203:99:0,611,8477	0/0:181,0:181:99:0,545,7559	0/0:154,0:154:99:0,464,6431	0/0:166,0:166:99:0,500,6932	1/1:0,41:41:99:1712,123,0	1/1:0,94:94:99:3925,283,0
gi|293339394|gb|GU595196.1|	103211	.	A	T	11985.23	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-1.234;DP=2950;Dels=0.00;FS=18.903;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.060;QD=41.76;ReadPosRankSum=2.959;SB=-5178.30	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	1/1:0,63:63:99:2631,190,0	1/1:0,81:81:99:3383,244,0	0/0:104,0:104:99:0,313,4343	0/0:122,0:122:99:0,367,5095	0/0:181,0:181:99:0,545,7559	./.	0/0:162,0:162:99:0,488,6765	0/0:201,0:201:99:0,605,8394	0/0:148,0:148:99:0,445,6181	0/0:205,0:205:99:0,617,8561	0/0:178,0:178:99:0,536,7433	0/0:148,0:148:99:0,445,6181	0/0:185,0:185:99:0,557,7726	0/0:205,0:205:99:0,617,8561	0/0:178,0:178:99:0,536,7433	0/0:151,0:151:99:0,455,6306	0/0:165,0:165:99:0,497,6890	1/1:0,44:44:99:1837,132,0	1/1:0,99:99:99:4134,298,0
gi|293339394|gb|GU595196.1|	103262	.	T	C	7182.80	.	AC=8;AF=0.200;AN=40;BaseQRankSum=1.205;DP=2751;Dels=0.00;FS=2.768;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.110;QD=41.76;ReadPosRankSum=-5.555;SB=-3299.08	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:163,0:163:99:0,491,6807	1/1:0,35:35:99:1462,105,0	1/1:0,56:56:99:2339,169,0	0/0:100,0:100:99:0,301,4176	0/0:102,0:102:99:0,307,4260	0/0:188,0:188:99:0,566,7851	./.	0/0:171,0:171:99:0,515,7141	0/0:193,0:193:99:0,581,8060	0/0:167,0:167:99:0,503,6974	0/0:154,0:154:99:0,464,6431	0/0:156,0:156:99:0,470,6515	0/0:181,0:181:99:0,545,7559	0/0:189,0:189:99:0,569,7893	0/0:160,0:160:99:0,482,6682	0/0:141,0:141:99:0,424,5888	0/0:161,0:161:99:0,485,6723	0/0:171,0:171:99:0,515,7141	1/1:0,27:27:81.27:1128,81,0	1/1:0,54:54:99:2255,163,0
gi|293339394|gb|GU595196.1|	103271	.	G	A	3716.69	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.783;DP=2637;Dels=0.00;FS=0.813;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.512;QD=41.76;ReadPosRankSum=-10.375;SB=-1753.05	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:154,0:154:99:0,464,6431	1/1:0,18:18:54.18:752,54,0	1/1:0,27:27:81.27:1128,81,0	0/0:96,0:96:99:0,289,4009	0/0:91,0:91:99:0,274,3800	0/0:192,0:192:99:0,578,8018	./.	0/0:165,0:165:99:0,497,6890	0/0:190,0:190:99:0,572,7934	0/0:175,0:175:99:0,527,7308	0/0:141,0:141:99:0,424,5888	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:191,0:191:99:0,575,7976	0/0:159,0:159:99:0,479,6640	0/0:145,0:145:99:0,436,6055	0/0:159,0:159:99:0,479,6640	0/0:176,0:176:99:0,530,7350	1/1:0,12:12:36.12:501,36,0	1/1:0,32:32:96.32:1336,96,0
gi|293339394|gb|GU595196.1|	103304	.	G	C	10481.86	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.812;DP=2775;Dels=0.00;FS=0.235;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.226;QD=41.76;ReadPosRankSum=-1.532;SB=-5136.54	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:142,0:142:99:0,427,5930	1/1:0,57:57:99:2380,172,0	1/1:0,67:67:99:2798,202,0	0/0:93,0:93:99:0,280,3884	0/0:89,0:89:99:0,268,3717	0/0:192,0:192:99:0,578,8018	./.	0/0:177,0:177:99:0,533,7392	0/0:186,0:186:99:0,560,7767	0/0:187,0:187:99:0,563,7809	0/0:147,0:147:99:0,442,6139	0/0:181,0:181:99:0,545,7559	0/0:139,0:139:99:0,418,5805	0/0:172,0:172:99:0,518,7183	0/0:149,0:149:99:0,448,6222	0/0:144,0:144:99:0,433,6013	0/0:155,0:155:99:0,467,6473	0/0:205,0:205:99:0,617,8561	1/1:0,32:32:96.32:1336,96,0	1/1:0,95:95:99:3967,286,0
gi|293339394|gb|GU595196.1|	103307	.	G	A,T	11734.67	.	AC=8,2;AF=0.190,0.048;AN=42;BaseQRankSum=1.348;DP=2800;Dels=0.00;FS=1.242;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.182;QD=41.76;ReadPosRankSum=1.386;SB=-5550.36	GT:AD:DP:GQ:PL	0/0:158,0,0:158:99:0,476,6598,476,6598,6598	0/0:144,0,0:144:99:0,433,6013,433,6013,6013	1/1:0,64,0:64:99:2673,193,0,2673,193,2673	1/1:0,74,0:74:99:3090,223,0,3090,223,3090	0/0:93,0,0:93:99:0,280,3884,280,3884,3884	0/0:89,0,0:89:99:0,268,3717,268,3717,3717	0/0:188,0,0:188:99:0,566,7851,566,7851,7851	2/2:0,0,5:5:15.05:209,209,209,15,15,0	0/0:176,0,0:176:99:0,530,7350,530,7350,7350	0/0:187,0,0:187:99:0,563,7809,563,7809,7809	0/0:182,0,0:182:99:0,548,7600,548,7600,7600	0/0:154,0,0:154:99:0,464,6431,464,6431,6431	0/0:187,0,0:187:99:0,563,7809,563,7809,7809	0/0:137,0,0:137:99:0,412,5721,412,5721,5721	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	0/0:145,0,0:145:99:0,436,6055,436,6055,6055	0/0:143,0,0:143:99:0,430,5972,430,5972,5972	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	0/0:206,0,0:206:99:0,620,8603,620,8603,8603	1/1:0,36,0:36:99:1503,108,0,1503,108,1503	1/1:0,102,0:102:99:4260,307,0,4260,307,4260
gi|293339394|gb|GU595196.1|	103313	.	G	T	647.59	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.037;DP=2877;Dels=0.00;FS=4.734;HRun=0;HaplotypeScore=1.0475;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.052;QD=38.09;ReadPosRankSum=-4.551;SB=-250.41	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:144,0:144:99:0,433,6013	0/0:73,0:73:99:0,220,3049	0/0:97,0:97:99:0,292,4051	0/0:91,0:91:99:0,274,3800	0/0:85,0:85:99:0,256,3550	0/0:190,0:190:99:0,572,7934	1/1:0,17:17:51.17:710,51,0	0/0:184,0:184:99:0,554,7684	0/0:173,0:173:99:0,521,7225	0/0:181,0:181:99:0,545,7559	0/0:160,0:160:99:0,482,6682	0/0:185,0:185:99:0,557,7726	0/0:147,0:147:99:0,442,6139	0/0:167,0:167:99:0,503,6974	0/0:143,0:143:99:0,430,5972	0/0:149,0:149:99:0,448,6222	0/0:159,0:159:99:0,479,6640	0/0:203,0:203:99:0,611,8477	0/0:50,0:50:99:0,151,2088	0/0:123,0:123:99:0,370,5137
gi|293339394|gb|GU595196.1|	103385	.	A	T	1942.15	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.144;DP=3148;Dels=0.00;FS=12.334;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.474;QD=40.46;ReadPosRankSum=0.663;SB=-709.94	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:173,0:173:99:0,521,7225	0/0:90,0:90:99:0,271,3758	0/0:148,0:148:99:0,445,6181	0/0:106,0:106:99:0,319,4427	0/0:102,0:102:99:0,307,4260	0/0:180,0:180:99:0,542,7517	1/1:0,48:48:99:2004,144,0	0/0:160,0:160:99:0,482,6682	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:180,0:180:99:0,542,7517	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:148,0:148:99:0,445,6181	0/0:179,0:179:99:0,539,7475	0/0:183,0:183:99:0,551,7642	0/0:170,0:170:99:0,512,7099	0/0:80,0:80:99:0,241,3341	0/0:172,0:172:99:0,518,7183
gi|293339394|gb|GU595196.1|	103430	.	T	C	10273.06	.	AC=10;AF=0.238;AN=42;BaseQRankSum=1.312;DP=2825;Dels=0.00;FS=27.775;HRun=1;HaplotypeScore=0.9523;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.037;QD=41.76;ReadPosRankSum=-0.391;SB=-4092.53	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:166,0:166:99:0,500,6932	1/1:0,44:44:99:1837,132,0	1/1:0,73:73:99:3049,220,0	0/0:86,0:86:99:0,259,3591	0/0:122,0:122:99:0,367,5095	0/0:186,0:186:99:0,560,7767	1/1:0,21:21:63.21:877,63,0	0/0:160,0:160:99:0,482,6682	0/0:189,0:189:99:0,569,7893	0/0:157,0:157:99:0,473,6556	0/0:177,0:177:99:0,533,7392	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:152,0:152:99:0,458,6348	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	1/1:0,40:40:99:1670,120,0	1/1:0,68:68:99:2840,205,0
gi|293339394|gb|GU595196.1|	103433	.	C	A	8853.21	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.039;DP=2831;Dels=0.00;FS=22.797;HRun=0;HaplotypeScore=0.9523;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.194;QD=41.76;ReadPosRankSum=-4.785;SB=-3549.65	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:163,0:163:99:0,491,6807	1/1:0,40:40:99:1670,120,0	1/1:0,72:72:99:3007,217,0	0/0:93,0:93:99:0,280,3884	0/0:126,0:126:99:0,379,5262	0/0:179,0:179:99:0,539,7475	0/0:22,0:22:66.22:0,66,919	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:157,0:157:99:0,473,6556	0/0:186,0:186:99:0,560,7767	0/0:180,0:180:99:0,542,7517	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	1/1:0,34:34:99:1420,102,0	1/1:0,66:66:99:2756,199,0
gi|293339394|gb|GU595196.1|	103454	.	G	T	8811.45	.	AC=10;AF=0.238;AN=42;BaseQRankSum=1.069;DP=2847;Dels=0.00;FS=12.015;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.632;QD=41.76;ReadPosRankSum=-1.006;SB=-3758.44	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:187,0:187:99:0,563,7809	1/1:0,34:34:99:1420,102,0	1/1:0,57:57:99:2380,172,0	0/0:90,0:90:99:0,271,3758	0/0:104,0:104:99:0,313,4343	0/0:161,0:161:99:0,485,6723	1/1:0,24:24:72.24:1002,72,0	0/0:176,0:176:99:0,530,7350	0/0:185,0:185:99:0,557,7726	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:172,0:172:99:0,518,7183	0/0:187,0:187:99:0,563,7809	0/0:178,0:178:99:0,536,7433	0/0:184,0:184:99:0,554,7684	1/1:0,31:31:93.31:1295,93,0	1/1:0,65:65:99:2714,196,0
gi|293339394|gb|GU595196.1|	103470	.	C	A	4176.05	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.552;DP=2972;Dels=0.00;FS=11.748;HRun=1;HaplotypeScore=1.6188;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.476;QD=41.76;ReadPosRankSum=4.417;SB=-1628.67	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:175,0:175:99:0,527,7308	1/1:0,53:53:99:2213,160,0	0/0:97,0:97:99:0,292,4051	0/0:109,0:109:99:0,328,4552	0/0:90,0:90:99:0,271,3758	0/0:168,0:168:99:0,506,7016	0/0:34,0:34:99:0,102,1420	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	0/0:188,0:188:99:0,566,7851	0/0:189,0:189:99:0,569,7893	0/0:166,0:166:99:0,500,6932	0/0:147,0:147:99:0,442,6139	0/0:186,0:186:99:0,560,7767	0/0:174,0:174:99:0,524,7266	0/0:180,0:180:99:0,542,7517	0/0:163,0:163:99:0,491,6807	0/0:179,0:179:99:0,539,7475	1/1:0,47:47:99:1963,141,0	0/0:115,0:115:99:0,346,4802
gi|293339394|gb|GU595196.1|	103472	.	T	C	1441.03	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.492;DP=2971;Dels=0.00;FS=2.984;HRun=0;HaplotypeScore=1.7141;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.941;QD=40.03;ReadPosRankSum=1.016;SB=-626.42	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:169,0:169:99:0,509,7057	0/0:58,0:58:99:0,175,2422	0/0:104,0:104:99:0,313,4343	0/0:109,0:109:99:0,328,4552	0/0:89,0:89:99:0,268,3717	0/0:171,0:171:99:0,515,7141	1/1:0,36:36:99:1503,108,0	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	0/0:187,0:187:99:0,563,7809	0/0:181,0:181:99:0,545,7559	0/0:166,0:166:99:0,500,6932	0/0:149,0:149:99:0,448,6222	0/0:181,0:181:99:0,545,7559	0/0:171,0:171:99:0,515,7141	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:188,0:188:99:0,566,7851	0/0:49,0:49:99:0,147,2046	0/0:119,0:119:99:0,358,4969
gi|293339394|gb|GU595196.1|	103502	.	T	G	16620.63	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.064;DP=3019;Dels=0.00;FS=12.222;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.612;QD=41.76;ReadPosRankSum=1.423;SB=-7642.16	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:164,0:164:99:0,494,6849	1/1:0,80:80:99:3341,241,0	1/1:0,120:120:99:5011,361,0	0/0:96,0:96:99:0,289,4009	0/0:96,0:96:99:0,289,4009	0/0:202,0:202:99:0,608,8436	0/0:44,0:44:99:0,132,1837	0/0:164,0:164:99:0,494,6849	0/0:186,0:186:99:0,560,7767	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:181,0:181:99:0,545,7559	0/0:151,0:151:99:0,455,6306	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:188,0:188:99:0,566,7851	1/1:0,62:62:99:2589,187,0	1/1:0,136:136:99:5679,409,0
gi|293339394|gb|GU595196.1|	103577	.	T	C	16578.87	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.464;DP=3064;Dels=0.00;FS=29.942;HRun=1;HaplotypeScore=7.0943;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.699;QD=41.76;ReadPosRankSum=0.237;SB=-6890.47	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:182,0:182:99:0,548,7600	1/1:0,68:68:99:2840,205,0	1/1:0,120:120:99:5011,361,0	0/0:85,0:85:99:0,256,3550	0/0:100,0:100:99:0,301,4176	0/0:176,0:176:99:0,530,7350	0/0:41,0:41:99:0,123,1712	0/0:193,0:193:99:0,581,8060	0/0:194,0:194:99:0,584,8102	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:200,0:200:99:0,602,8352	0/0:167,0:167:99:0,503,6974	0/0:153,0:153:99:0,461,6389	0/0:164,0:164:99:0,494,6849	0/0:174,0:174:99:0,524,7266	0/0:179,0:179:99:0,539,7475	0/0:177,0:177:99:0,533,7392	1/1:0,65:65:99:2714,196,0	1/1:0,144:144:99:6013,433,0
gi|293339394|gb|GU595196.1|	103584	.	G	A	11191.79	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.195;DP=3065;Dels=0.00;FS=27.702;HRun=2;HaplotypeScore=7.0943;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.396;QD=41.76;ReadPosRankSum=-0.539;SB=-4468.37	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:174,0:174:99:0,524,7266	0/0:78,0:78:99:0,235,3257	1/1:0,130:130:99:5429,391,0	0/0:85,0:85:99:0,256,3550	0/0:99,0:99:99:0,298,4134	0/0:171,0:171:99:0,515,7141	0/0:31,0:31:93.31:0,93,1295	0/0:188,0:188:99:0,566,7851	0/0:184,0:184:99:0,554,7684	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:206,0:206:99:0,620,8603	0/0:164,0:164:99:0,494,6849	0/0:155,0:155:99:0,467,6473	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:68,0:68:99:0,205,2840	1/1:0,138:138:99:5763,415,0
gi|293339394|gb|GU595196.1|	103586	.	G	T	1232.23	.	AC=2;AF=0.048;AN=42;BaseQRankSum=2.139;DP=3066;Dels=0.00;FS=63.279;HRun=2;HaplotypeScore=6.9515;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.415;QD=39.75;ReadPosRankSum=-1.636;SB=-83.54	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:172,0:172:99:0,518,7183	0/0:78,0:78:99:0,235,3257	0/0:129,0:129:99:0,388,5387	0/0:91,0:91:99:0,274,3800	0/0:96,0:96:99:0,289,4009	0/0:176,0:176:99:0,530,7350	1/1:0,31:31:93.31:1295,93,0	0/0:182,0:182:99:0,548,7600	0/0:183,0:183:99:0,551,7642	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:205,0:205:99:0,617,8561	0/0:160,0:160:99:0,482,6682	0/0:157,0:157:99:0,473,6556	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	0/0:179,0:179:99:0,539,7475	0/0:72,0:72:99:0,217,3007	0/0:132,0:132:99:0,397,5512
gi|293339394|gb|GU595196.1|	103605	.	G	T	34.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.071;DP=3072;Dels=0.00;FS=6.033;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8839;MQ=254.00;MQ0=0;MQRankSum=0.270;QD=17.25;ReadPosRankSum=-2.418;SB=-0.02	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:90,0:90:99:0,271,3758	0/0:126,0:126:99:0,379,5262	0/0:79,0:79:99:0,238,3299	0/0:113,0:113:99:0,340,4719	0/0:190,0:190:99:0,572,7934	1/1:0,2:2:6.02:84,6,0	0/0:171,0:171:99:0,515,7141	0/0:181,0:181:99:0,545,7559	0/0:195,0:195:99:0,587,8143	0/0:177,0:177:99:0,533,7392	0/0:185,0:185:99:0,557,7726	0/0:149,0:149:99:0,448,6222	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:188,0:188:99:0,566,7851	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:70,0:70:99:0,211,2923	0/0:141,0:141:99:0,424,5888
gi|293339394|gb|GU595196.1|	103635	.	T	C	15868.95	.	AC=8;AF=0.200;AN=40;BaseQRankSum=1.544;DP=3100;Dels=0.00;FS=25.111;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.283;QD=41.76;ReadPosRankSum=-1.155;SB=-6723.43	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	1/1:0,81:81:99:3383,244,0	1/1:0,114:114:99:4761,343,0	0/0:107,0:107:99:0,322,4468	0/0:125,0:125:99:0,376,5220	0/0:189,0:189:99:0,569,7893	./.	0/0:165,0:165:99:0,497,6890	0/0:179,0:179:99:0,539,7475	0/0:180,0:180:99:0,542,7517	0/0:202,0:202:99:0,608,8436	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:171,0:171:99:0,515,7141	0/0:189,0:189:99:0,569,7893	0/0:181,0:181:99:0,545,7559	0/0:185,0:185:99:0,557,7726	1/1:0,48:48:99:2004,144,0	1/1:0,137:137:99:5721,412,0
gi|293339394|gb|GU595196.1|	103677	.	C	G	438.87	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.093;DP=3008;Dels=0.00;FS=33.158;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.050;QD=36.57;ReadPosRankSum=-3.859;SB=-0.02	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:75,0:75:99:0,226,3132	0/0:115,0:115:99:0,346,4802	0/0:86,0:86:99:0,259,3591	0/0:109,0:109:99:0,328,4552	0/0:172,0:172:99:0,518,7183	1/1:0,12:12:36.12:501,36,0	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:190,0:190:99:0,572,7934	0/0:177,0:177:99:0,533,7392	0/0:202,0:202:99:0,608,8436	0/0:186,0:186:99:0,560,7767	0/0:156,0:156:99:0,470,6515	0/0:158,0:158:99:0,476,6598	0/0:156,0:156:99:0,470,6515	0/0:182,0:182:99:0,548,7600	0/0:57,0:57:99:0,172,2380	0/0:132,0:132:99:0,397,5512
gi|293339394|gb|GU595196.1|	103682	.	A	G	689.35	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.202;DP=2988;Dels=0.00;FS=50.843;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.642;QD=38.30;ReadPosRankSum=-3.261;SB=-0.02	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:182,0:182:99:0,548,7600	0/0:78,0:78:99:0,235,3257	0/0:118,0:118:99:0,355,4928	0/0:91,0:91:99:0,274,3800	0/0:99,0:99:99:0,298,4134	0/0:169,0:169:99:0,509,7057	1/1:0,18:18:54.18:752,54,0	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:182,0:182:99:0,548,7600	0/0:197,0:197:99:0,593,8227	0/0:181,0:181:99:0,545,7559	0/0:150,0:150:99:0,452,6264	0/0:146,0:146:99:0,439,6097	0/0:156,0:156:99:0,470,6515	0/0:187,0:187:99:0,563,7809	0/0:60,0:60:99:0,181,2506	0/0:124,0:124:99:0,373,5178
gi|293339394|gb|GU595196.1|	103743	.	G	A	151.98	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.757;DP=2651;Dels=0.00;FS=12.057;HRun=1;HaplotypeScore=0.2381;InbreedingCoeff=0.9827;MQ=254.00;MQ0=0;MQRankSum=-0.483;QD=30.40;ReadPosRankSum=-2.946;SB=-0.02	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:13,0:13:39.13:0,39,543	0/0:13,0:13:39.13:0,39,543	0/0:97,0:97:99:0,292,4051	0/0:113,0:113:99:0,340,4719	0/0:173,0:173:99:0,521,7225	1/1:0,5:5:15.05:209,15,0	0/0:167,0:167:99:0,503,6974	0/0:182,0:182:99:0,548,7600	0/0:149,0:149:99:0,448,6222	0/0:182,0:182:99:0,548,7600	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	0/0:149,0:149:99:0,448,6222	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:10,0:10:30.10:0,30,418	0/0:10,0:10:30.10:0,30,418
gi|293339394|gb|GU595196.1|	103744	.	T	C	114.67	.	AC=3;AF=0.071;AN=42;BaseQRankSum=1.367;DP=2654;Dels=0.00;FS=9.046;HRun=0;HaplotypeScore=0.5237;InbreedingCoeff=-0.0786;MQ=254.00;MQ0=0;MQRankSum=0.527;QD=3.10;ReadPosRankSum=-4.487;SB=-31.48	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/1:10,2:12:47.40:47,0,381	0/0:12,0:12:36.12:0,36,501	0/0:100,0:100:99:0,301,4176	0/0:115,0:115:99:0,346,4802	0/0:169,0:169:99:0,509,7057	0/0:4,0:4:12.04:0,12,167	0/0:171,0:171:99:0,515,7141	0/0:180,0:180:99:0,542,7517	0/0:150,0:150:99:0,452,6264	0/0:180,0:180:99:0,542,7517	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:179,0:179:99:0,539,7475	0/0:147,0:147:99:0,442,6139	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/1:10,3:13:86.15:86,0,378	0/1:10,2:12:47.40:47,0,381
gi|293339394|gb|GU595196.1|	103745	.	T	C	1383.76	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.083;DP=2650;Dels=0.00;FS=56.775;HRun=0;HaplotypeScore=0.4761;InbreedingCoeff=0.1880;MQ=254.00;MQ0=0;MQRankSum=-0.633;QD=25.16;ReadPosRankSum=-8.773;SB=-196.76	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:170,0:170:99:0,512,7099	0/1:5,8:13:99:295,0,170	0/1:2,10:12:47.40:381,0,47	0/0:100,0:100:99:0,301,4176	0/0:117,0:117:99:0,352,4886	0/0:165,0:165:99:0,497,6890	1/1:0,3:3:9.03:125,9,0	0/0:176,0:176:99:0,530,7350	0/0:181,0:181:99:0,545,7559	0/0:149,0:149:99:0,448,6222	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	0/0:145,0:145:99:0,436,6055	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/1:5,9:14:99:334,0,167	0/1:4,9:13:99:337,0,128
gi|293339394|gb|GU595196.1|	103788	.	A	T	13071	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.923;DP=2944;Dels=0.00;FS=339.687;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.220;QD=41.76;ReadPosRankSum=2.849;SB=-2004.51	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:187,0:187:99:0,563,7809	1/1:0,66:66:99:2756,199,0	1/1:0,95:95:99:3967,286,0	0/0:98,0:98:99:0,295,4093	0/0:133,0:133:99:0,400,5554	0/0:196,0:196:99:0,590,8185	./.	0/0:154,0:154:99:0,464,6431	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:182,0:182:99:0,548,7600	0/0:179,0:179:99:0,539,7475	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:157,0:157:99:0,473,6556	0/0:161,0:161:99:0,485,6723	0/0:170,0:170:99:0,512,7099	1/1:0,53:53:99:2213,160,0	1/1:0,99:99:99:4134,298,0
gi|293339394|gb|GU595196.1|	103849	.	A	G	835.60	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.513;DP=2674;Dels=0.00;FS=30.864;HRun=1;HaplotypeScore=1.0999;InbreedingCoeff=0.9915;MQ=254.00;MQ0=0;MQRankSum=0.559;QD=37.98;ReadPosRankSum=-5.119;SB=-125.29	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:173,0:173:99:0,521,7225	1/1:0,17:17:51.17:710,51,0	0/0:27,0:27:81.27:0,81,1128	0/0:103,0:103:99:0,310,4301	0/0:125,0:125:99:0,376,5220	0/0:163,0:163:99:0,491,6807	./.	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:150,0:150:99:0,452,6264	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:177,0:177:99:0,533,7392	1/1:0,5:5:15.05:209,15,0	0/0:36,0:36:99:0,108,1503
gi|293339394|gb|GU595196.1|	103851	.	T	C	2806.48	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.090;DP=2646;Dels=0.00;FS=38.501;HRun=0;HaplotypeScore=0.8499;InbreedingCoeff=0.9952;MQ=254.00;MQ0=0;MQRankSum=-1.357;QD=40.09;ReadPosRankSum=-10.171;SB=-793.39	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:173,0:173:99:0,521,7225	1/1:0,12:12:36.12:501,36,0	1/1:0,24:24:72.24:1002,72,0	0/0:101,0:101:99:0,304,4218	0/0:125,0:125:99:0,376,5220	0/0:165,0:165:99:0,497,6890	./.	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:145,0:145:99:0,436,6055	0/0:185,0:185:99:0,557,7726	0/0:158,0:158:99:0,476,6598	0/0:174,0:174:99:0,524,7266	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:158,0:158:99:0,476,6598	0/0:160,0:160:99:0,482,6682	0/0:176,0:176:99:0,530,7350	1/1:0,5:5:15.05:209,15,0	1/1:0,29:29:87.29:1211,87,0
gi|293339394|gb|GU595196.1|	103857	.	A	G	543.78	.	AC=4;AF=0.111;AN=36;BaseQRankSum=2.359;DP=2624;Dels=0.00;FS=9.300;HRun=5;HaplotypeScore=0.0000;InbreedingCoeff=0.9967;MQ=254.00;MQ0=0;MQRankSum=0.539;QD=36.25;ReadPosRankSum=-5.979;SB=-163.49	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:173,0:173:99:0,521,7225	./.	1/1:0,7:7:21.07:292,21,0	0/0:109,0:109:99:0,328,4552	0/0:123,0:123:99:0,370,5137	0/0:159,0:159:99:0,479,6640	./.	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/0:143,0:143:99:0,430,5972	0/0:188,0:188:99:0,566,7851	0/0:153,0:153:99:0,461,6389	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:177,0:177:99:0,533,7392	0/0:178,0:178:99:0,536,7433	./.	1/1:0,8:8:24.08:334,24,0
gi|293339394|gb|GU595196.1|	103877	.	T	C	5428.86	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.997;DP=2837;Dels=0.00;FS=13.201;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.337;QD=41.76;ReadPosRankSum=-7.874;SB=-2254.92	GT:AD:DP:GQ:PL	0/0:192,0:192:99:0,578,8018	0/0:176,0:176:99:0,530,7350	1/1:0,18:18:54.18:752,54,0	1/1:0,47:47:99:1963,141,0	0/0:104,0:104:99:0,313,4343	0/0:135,0:135:99:0,406,5638	0/0:181,0:181:99:0,545,7559	./.	0/0:154,0:154:99:0,464,6431	0/0:163,0:163:99:0,491,6807	0/0:158,0:158:99:0,476,6598	0/0:204,0:204:99:0,614,8519	0/0:151,0:151:99:0,455,6306	0/0:194,0:194:99:0,584,8102	0/0:185,0:185:99:0,557,7726	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:183,0:183:99:0,551,7642	0/0:189,0:189:99:0,569,7893	1/1:0,15:15:45.15:626,45,0	1/1:0,50:50:99:2088,151,0
gi|293339394|gb|GU595196.1|	103907	.	T	A	16578.87	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-1.219;DP=3065;Dels=0.00;FS=30.787;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.481;QD=41.76;ReadPosRankSum=3.686;SB=-7141.04	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	1/1:0,72:72:99:3007,217,0	1/1:0,130:130:99:5429,391,0	0/0:98,0:98:99:0,295,4093	0/0:116,0:116:99:0,349,4844	0/0:179,0:179:99:0,539,7475	./.	0/0:166,0:166:99:0,500,6932	0/0:160,0:160:99:0,482,6682	0/0:160,0:160:99:0,482,6682	0/0:197,0:197:99:0,593,8227	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:214,0:214:99:0,644,8937	0/0:173,0:173:99:0,521,7225	0/0:182,0:182:99:0,548,7600	0/0:155,0:155:99:0,467,6473	0/0:183,0:183:99:0,551,7642	1/1:0,62:62:99:2589,187,0	1/1:0,133:133:99:5554,400,0
gi|293339394|gb|GU595196.1|	103954	.	T	C	5136.54	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-1.486;DP=2752;Dels=0.00;FS=40.356;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.050;QD=41.76;ReadPosRankSum=-7.672;SB=-1586.89	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:203,0:203:99:0,611,8477	1/1:0,27:27:81.27:1128,81,0	1/1:0,32:32:96.32:1336,96,0	0/0:95,0:95:99:0,286,3967	0/0:111,0:111:99:0,334,4635	0/0:164,0:164:99:0,494,6849	./.	0/0:182,0:182:99:0,548,7600	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:195,0:195:99:0,587,8143	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:183,0:183:99:0,551,7642	0/0:158,0:158:99:0,476,6598	0/0:159,0:159:99:0,479,6640	0/0:185,0:185:99:0,557,7726	0/0:178,0:178:99:0,536,7433	1/1:0,16:16:48.16:668,48,0	1/1:0,48:48:99:2004,144,0
gi|293339394|gb|GU595196.1|	103963	.	A	C	1886.99	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.622;DP=2659;Dels=0.00;FS=15.336;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9986;MQ=254.00;MQ0=0;MQRankSum=2.176;QD=39.31;ReadPosRankSum=-8.624;SB=-667.46	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:186,0:186:99:0,560,7767	1/1:0,10:10:30.10:418,30,0	1/1:0,11:11:33.11:459,33,0	0/0:90,0:90:99:0,271,3758	0/0:109,0:109:99:0,328,4552	0/0:168,0:168:99:0,506,7016	./.	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:200,0:200:99:0,602,8352	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:188,0:188:99:0,566,7851	0/0:158,0:158:99:0,476,6598	0/0:154,0:154:99:0,464,6431	0/0:189,0:189:99:0,569,7893	0/0:166,0:166:99:0,500,6932	1/1:0,7:7:21.07:292,21,0	1/1:0,20:20:60.20:835,60,0
gi|293339394|gb|GU595196.1|	104030	.	A	G	1928.62	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.512;DP=2707;Dels=0.00;FS=18.721;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9991;MQ=254.00;MQ0=0;MQRankSum=-1.920;QD=39.36;ReadPosRankSum=-8.824;SB=-624.33	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	1/1:0,8:8:24.08:334,24,0	1/1:0,15:15:45.15:626,45,0	0/0:113,0:113:99:0,340,4719	0/0:112,0:112:99:0,337,4677	0/0:181,0:181:99:0,545,7559	./.	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:170,0:170:99:0,512,7099	0/0:187,0:187:99:0,563,7809	0/0:162,0:162:99:0,488,6765	0/0:161,0:161:99:0,485,6723	0/0:185,0:185:99:0,557,7726	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:192,0:192:99:0,578,8018	1/1:0,9:9:27.09:376,27,0	1/1:0,17:17:51.17:710,51,0
gi|293339394|gb|GU595196.1|	104043	.	C	T	6472.87	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.206;DP=2825;Dels=0.00;FS=45.036;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.221;QD=41.76;ReadPosRankSum=-4.725;SB=-2088.04	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	1/1:0,31:31:93.31:1295,93,0	1/1:0,49:49:99:2046,147,0	0/0:109,0:109:99:0,328,4552	0/0:115,0:115:99:0,346,4802	0/0:185,0:185:99:0,557,7726	./.	0/0:181,0:181:99:0,545,7559	0/0:163,0:163:99:0,491,6807	0/0:185,0:185:99:0,557,7726	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:195,0:195:99:0,587,8143	0/0:163,0:163:99:0,491,6807	0/0:181,0:181:99:0,545,7559	0/0:187,0:187:99:0,563,7809	1/1:0,25:25:75.25:1044,75,0	1/1:0,50:50:99:2088,151,0
gi|293339394|gb|GU595196.1|	104188	.	C	T	3195.39	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.870;DP=2906;Dels=0.00;FS=85.542;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.540;QD=40.97;ReadPosRankSum=1.110;SB=-542.90	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:178,0:178:99:0,536,7433	0/0:71,0:71:99:0,214,2965	1/1:0,78:78:99:3257,235,0	0/0:96,0:96:99:0,289,4009	0/0:102,0:102:99:0,307,4260	0/0:164,0:164:99:0,494,6849	./.	0/0:177,0:177:99:0,533,7392	0/0:181,0:181:99:0,545,7559	0/0:183,0:183:99:0,551,7642	0/0:167,0:167:99:0,503,6974	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:44,0:44:99:0,132,1837	0/0:99,0:99:99:0,298,4134
gi|293339394|gb|GU595196.1|	104266	.	G	A	12820.44	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.557;DP=2907;Dels=0.00;FS=40.868;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.547;QD=41.76;ReadPosRankSum=-1.824;SB=-4760.70	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:195,0:195:99:0,587,8143	1/1:0,63:63:99:2631,190,0	1/1:0,94:94:99:3925,283,0	0/0:104,0:104:99:0,313,4343	0/0:120,0:120:99:0,361,5011	0/0:159,0:159:99:0,479,6640	./.	0/0:149,0:149:99:0,448,6222	0/0:179,0:179:99:0,539,7475	0/0:183,0:183:99:0,551,7642	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:157,0:157:99:0,473,6556	0/0:142,0:142:99:0,427,5930	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	0/0:181,0:181:99:0,545,7559	1/1:0,47:47:99:1963,141,0	1/1:0,103:103:99:4301,310,0
gi|293339394|gb|GU595196.1|	104301	.	C	A	14866.70	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.149;DP=3040;Dels=0.00;FS=170.455;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.958;QD=41.76;ReadPosRankSum=0.838;SB=-3925.49	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:177,0:177:99:0,533,7392	1/1:0,74:74:99:3090,223,0	1/1:0,107:107:99:4468,322,0	0/0:90,0:90:99:0,271,3758	0/0:114,0:114:99:0,343,4761	0/0:188,0:188:99:0,566,7851	./.	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:186,0:186:99:0,560,7767	0/0:195,0:195:99:0,587,8143	0/0:189,0:189:99:0,569,7893	0/0:182,0:182:99:0,548,7600	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:186,0:186:99:0,560,7767	1/1:0,63:63:99:2631,190,0	1/1:0,112:112:99:4677,337,0
gi|293339394|gb|GU595196.1|	104339	.	G	A	16286.55	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-1.372;DP=3052;Dels=0.00;FS=61.403;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.876;QD=41.76;ReadPosRankSum=-0.400;SB=-6013.51	GT:AD:DP:GQ:PL	0/0:192,0:192:99:0,578,8018	0/0:149,0:149:99:0,448,6222	1/1:0,79:79:99:3299,238,0	1/1:0,124:124:99:5178,373,0	0/0:107,0:107:99:0,322,4468	0/0:108,0:108:99:0,325,4510	0/0:179,0:179:99:0,539,7475	./.	0/0:186,0:186:99:0,560,7767	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:183,0:183:99:0,551,7642	0/0:201,0:201:99:0,605,8394	0/0:166,0:166:99:0,500,6932	0/0:179,0:179:99:0,539,7475	0/0:172,0:172:99:0,518,7183	0/0:183,0:183:99:0,551,7642	0/0:146,0:146:99:0,439,6097	1/1:0,52:52:99:2172,157,0	1/1:0,135:135:99:5638,406,0
gi|293339394|gb|GU595196.1|	104363	.	C	T	17831.68	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.666;DP=2962;Dels=0.00;FS=58.575;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.892;QD=41.76;ReadPosRankSum=-1.944;SB=-6848.71	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:158,0:158:99:0,476,6598	1/1:0,83:83:99:3466,250,0	1/1:0,139:139:99:5805,418,0	0/0:97,0:97:99:0,292,4051	0/0:110,0:110:99:0,331,4594	0/0:173,0:173:99:0,521,7225	./.	0/0:158,0:158:99:0,476,6598	0/0:154,0:154:99:0,464,6431	0/0:144,0:144:99:0,433,6013	0/0:160,0:160:99:0,482,6682	0/0:167,0:167:99:0,503,6974	0/0:187,0:187:99:0,563,7809	0/0:166,0:166:99:0,500,6932	0/0:182,0:182:99:0,548,7600	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	1/1:0,54:54:99:2255,163,0	1/1:0,151:151:99:6306,455,0
gi|293339394|gb|GU595196.1|	104444	.	T	A	12444.60	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.168;DP=2870;Dels=0.00;FS=6.555;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.089;QD=41.76;ReadPosRankSum=2.451;SB=-5804.71	GT:AD:DP:GQ:PL	0/0:200,0:200:99:0,602,8352	0/0:151,0:151:99:0,455,6306	1/1:0,67:67:99:2798,202,0	1/1:0,92:92:99:3842,277,0	0/0:91,0:91:99:0,274,3800	0/0:110,0:110:99:0,331,4594	0/0:176,0:176:99:0,530,7350	./.	0/0:168,0:168:99:0,506,7016	0/0:197,0:197:99:0,593,8227	0/0:175,0:175:99:0,527,7308	0/0:153,0:153:99:0,461,6389	0/0:179,0:179:99:0,539,7475	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:150,0:150:99:0,452,6264	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:165,0:165:99:0,497,6890	1/1:0,39:39:99:1629,117,0	1/1:0,100:100:99:4176,301,0
gi|293339394|gb|GU595196.1|	104468	.	C	A	681.74	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.939;DP=2610;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9741;MQ=254.00;MQ0=0;MQRankSum=-2.031;QD=35.88;ReadPosRankSum=-7.177;SB=-361.64	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:160,0:160:99:0,482,6682	1/1:0,4:4:12.04:167,12,0	1/1:0,4:4:12.04:167,12,0	0/0:97,0:97:99:0,292,4051	0/0:120,0:120:99:0,361,5011	0/0:181,0:181:99:0,545,7559	./.	0/0:162,0:162:99:0,488,6765	0/0:173,0:173:99:0,521,7225	0/0:181,0:181:99:0,545,7559	0/0:160,0:160:99:0,482,6682	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	0/0:157,0:157:99:0,473,6556	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:167,0:167:99:0,503,6974	1/1:0,5:5:15.05:209,15,0	1/1:0,6:6:18.06:251,18,0
gi|293339394|gb|GU595196.1|	104487	.	T	C	1053.30	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.726;DP=2633;Dels=0.00;FS=21.181;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9926;MQ=254.00;MQ0=0;MQRankSum=1.724;QD=37.62;ReadPosRankSum=1.248;SB=-287.74	GT:AD:DP:GQ:PL	0/0:191,0:191:99:0,575,7976	0/0:151,0:151:99:0,455,6306	1/1:0,6:6:18.06:251,18,0	1/1:0,10:10:30.10:418,30,0	0/0:83,0:83:99:0,250,3466	0/0:116,0:116:99:0,349,4844	0/0:153,0:153:99:0,461,6389	./.	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:190,0:190:99:0,572,7934	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	1/1:0,6:6:18.06:251,18,0	1/1:0,6:6:18.06:251,18,0
gi|293339394|gb|GU595196.1|	104492	.	T	A	1053.30	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-1.936;DP=2643;Dels=0.00;FS=21.314;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9926;MQ=254.00;MQ0=0;MQRankSum=0.072;QD=37.62;ReadPosRankSum=5.009;SB=-287.74	GT:AD:DP:GQ:PL	0/0:199,0:199:99:0,599,8310	0/0:144,0:144:99:0,433,6013	1/1:0,6:6:18.06:251,18,0	1/1:0,10:10:30.10:418,30,0	0/0:79,0:79:99:0,238,3299	0/0:115,0:115:99:0,346,4802	0/0:153,0:153:99:0,461,6389	./.	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:187,0:187:99:0,563,7809	0/0:176,0:176:99:0,530,7350	0/0:191,0:191:99:0,575,7976	0/0:183,0:183:99:0,551,7642	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	0/0:184,0:184:99:0,554,7684	1/1:0,6:6:18.06:251,18,0	1/1:0,6:6:18.06:251,18,0
gi|293339394|gb|GU595196.1|	104521	.	T	G	616.41	.	AC=3;AF=0.075;AN=40;BaseQRankSum=-0.024;DP=2725;Dels=0.00;FS=4.453;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=-0.0811;MQ=254.00;MQ0=0;MQRankSum=0.393;QD=16.66;ReadPosRankSum=-7.107;SB=-234.63	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:155,0:155:99:0,467,6473	0/1:6,6:12:99:214,0,214	0/0:10,0:10:30.10:0,30,418	0/0:89,0:89:99:0,268,3717	0/0:129,0:129:99:0,388,5387	0/0:193,0:193:99:0,581,8060	./.	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:157,0:157:99:0,473,6556	0/0:186,0:186:99:0,560,7767	0/0:184,0:184:99:0,554,7684	0/0:197,0:197:99:0,593,8227	0/0:185,0:185:99:0,557,7726	0/0:171,0:171:99:0,515,7141	0/0:186,0:186:99:0,560,7767	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/1:6,2:8:59.44:59,0,226	0/1:6,11:17:99:408,0,199
gi|293339394|gb|GU595196.1|	104524	.	C	T	2346.03	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.050;DP=2754;Dels=0.00;FS=5.291;HRun=4;HaplotypeScore=0.0000;InbreedingCoeff=0.9998;MQ=254.00;MQ0=0;MQRankSum=1.000;QD=39.76;ReadPosRankSum=-10.671;SB=-1042.69	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:158,0:158:99:0,476,6598	1/1:0,15:15:45.15:626,45,0	1/1:0,15:15:45.15:626,45,0	0/0:89,0:89:99:0,268,3717	0/0:130,0:130:99:0,391,5429	0/0:197,0:197:99:0,593,8227	./.	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:156,0:156:99:0,470,6515	0/0:182,0:182:99:0,548,7600	0/0:183,0:183:99:0,551,7642	0/0:199,0:199:99:0,599,8310	0/0:179,0:179:99:0,539,7475	0/0:172,0:172:99:0,518,7183	0/0:192,0:192:99:0,578,8018	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	1/1:0,10:10:30.10:418,30,0	1/1:0,19:19:57.19:793,57,0
gi|293339394|gb|GU595196.1|	104556	.	C	T	4760.70	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.916;DP=3060;Dels=0.00;FS=5.983;HRun=1;HaplotypeScore=0.3333;InbreedingCoeff=0.9959;MQ=254.00;MQ0=0;MQRankSum=-0.574;QD=41.76;ReadPosRankSum=3.211;SB=-2088.04	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:128,0:128:99:0,385,5345	0/0:86,0:86:99:0,259,3591	1/1:0,114:114:99:4761,343,0	0/0:101,0:101:99:0,304,4218	0/0:122,0:122:99:0,367,5095	0/0:195,0:195:99:0,587,8143	0/0:7,0:7:21.07:0,21,292	0/0:184,0:184:99:0,554,7684	0/0:174,0:174:99:0,524,7266	0/0:156,0:156:99:0,470,6515	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:189,0:189:99:0,569,7893	0/0:192,0:192:99:0,578,8018	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:173,0:173:99:0,521,7225	0/0:70,0:70:99:0,211,2923	0/0:142,0:142:99:0,427,5930
gi|293339394|gb|GU595196.1|	104560	.	C	T	397.19	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.009;DP=3098;Dels=0.00;FS=30.172;HRun=2;HaplotypeScore=0.5237;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=0.866;QD=36.11;ReadPosRankSum=-3.656;SB=-0.02	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:137,0:137:99:0,412,5721	0/0:92,0:92:99:0,277,3842	0/0:126,0:126:99:0,379,5262	0/0:105,0:105:99:0,316,4385	0/0:115,0:115:99:0,346,4802	0/0:191,0:191:99:0,575,7976	1/1:0,11:11:33.11:459,33,0	0/0:179,0:179:99:0,539,7475	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	0/0:184,0:184:99:0,554,7684	0/0:186,0:186:99:0,560,7767	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:82,0:82:99:0,247,3424	0/0:151,0:151:99:0,455,6306
gi|293339394|gb|GU595196.1|	104572	.	C	A	1023.43	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.418;DP=3178;Dels=0.00;FS=75.595;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.747;QD=39.36;ReadPosRankSum=-1.481;SB=-0.02	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:131,0:131:99:0,394,5471	0/0:121,0:121:99:0,364,5053	0/0:160,0:160:99:0,482,6682	0/0:102,0:102:99:0,307,4260	0/0:101,0:101:99:0,304,4218	0/0:174,0:174:99:0,524,7266	1/1:0,26:26:78.26:1086,78,0	0/0:190,0:190:99:0,572,7934	0/0:181,0:181:99:0,545,7559	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:186,0:186:99:0,560,7767	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:186,0:186:99:0,560,7767	0/0:176,0:176:99:0,530,7350	0/0:90,0:90:99:0,271,3758	0/0:168,0:168:99:0,506,7016
gi|293339394|gb|GU595196.1|	104718	.	A	G	14240.29	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-2.139;DP=2886;Dels=0.00;FS=111.783;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.993;QD=41.76;ReadPosRankSum=-2.153;SB=-4593.66	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:142,0:142:99:0,427,5930	1/1:0,67:67:99:2798,202,0	1/1:0,90:90:99:3758,271,0	0/0:78,0:78:99:0,235,3257	0/0:107,0:107:99:0,322,4468	0/0:187,0:187:99:0,563,7809	1/1:0,24:24:72.24:1002,72,0	0/0:168,0:168:99:0,506,7016	0/0:188,0:188:99:0,566,7851	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	1/1:0,53:53:99:2213,160,0	1/1:0,107:107:99:4468,322,0
gi|293339394|gb|GU595196.1|	104733	.	C	T	5220.06	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.525;DP=2947;Dels=0.00;FS=71.694;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9421;MQ=254.00;MQ0=0;MQRankSum=0.710;QD=41.76;ReadPosRankSum=-0.672;SB=-1417.15	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:138,0:138:99:0,415,5763	0/0:81,0:81:99:0,244,3383	0/0:101,0:101:99:0,304,4218	0/0:91,0:91:99:0,274,3800	0/0:116,0:116:99:0,349,4844	0/0:177,0:177:99:0,533,7392	1/1:0,2:2:6.02:84,6,0	0/0:166,0:166:99:0,500,6932	0/0:179,0:179:99:0,539,7475	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:189,0:189:99:0,569,7893	0/0:175,0:175:99:0,527,7308	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	0/0:169,0:169:99:0,509,7057	0/0:182,0:182:99:0,548,7600	0/0:161,0:161:99:0,485,6723	0/0:54,0:54:99:0,163,2255	1/1:0,123:123:99:5137,370,0
gi|293339394|gb|GU595196.1|	104734	.	C	A	34.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.705;DP=2940;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.1905;InbreedingCoeff=0.8839;MQ=254.00;MQ0=0;MQRankSum=-0.687;QD=17.25;ReadPosRankSum=-2.344;SB=-38.87	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:136,0:136:99:0,409,5679	0/0:82,0:82:99:0,247,3424	0/0:101,0:101:99:0,304,4218	0/0:87,0:87:99:0,262,3633	0/0:118,0:118:99:0,355,4928	0/0:177,0:177:99:0,533,7392	1/1:0,2:2:6.02:84,6,0	0/0:166,0:166:99:0,500,6932	0/0:182,0:182:99:0,548,7600	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:190,0:190:99:0,572,7934	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:158,0:158:99:0,476,6598	0/0:55,0:55:99:0,166,2297	0/0:121,0:121:99:0,364,5053
gi|293339394|gb|GU595196.1|	104739	.	C	T	480.59	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.266;DP=2974;Dels=0.00;FS=5.755;HRun=1;HaplotypeScore=0.7142;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.013;QD=36.97;ReadPosRankSum=-4.732;SB=-166.46	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:132,0:132:99:0,397,5512	0/0:86,0:86:99:0,259,3591	0/0:104,0:104:99:0,313,4343	0/0:91,0:91:99:0,274,3800	0/0:113,0:113:99:0,340,4719	0/0:173,0:173:99:0,521,7225	1/1:0,13:13:39.13:543,39,0	0/0:169,0:169:99:0,509,7057	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:190,0:190:99:0,572,7934	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:166,0:166:99:0,500,6932	0/0:55,0:55:99:0,166,2297	0/0:131,0:131:99:0,394,5471
gi|293339394|gb|GU595196.1|	104757	.	G	A	4927.74	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.061;DP=3037;Dels=0.00;FS=3.424;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.641;QD=41.76;ReadPosRankSum=0.449;SB=-2255.08	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:143,0:143:99:0,430,5972	0/0:88,0:88:99:0,265,3675	1/1:0,118:118:99:4928,355,0	0/0:91,0:91:99:0,274,3800	0/0:122,0:122:99:0,367,5095	0/0:157,0:157:99:0,473,6556	0/0:61,0:61:99:0,184,2547	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:175,0:175:99:0,527,7308	0/0:185,0:185:99:0,557,7726	0/0:165,0:165:99:0,497,6890	0/0:175,0:175:99:0,527,7308	0/0:153,0:153:99:0,461,6389	0/0:157,0:157:99:0,473,6556	0/0:186,0:186:99:0,560,7767	0/0:173,0:173:99:0,521,7225	0/0:66,0:66:99:0,199,2756	0/0:151,0:151:99:0,455,6306
gi|293339394|gb|GU595196.1|	104790	.	G	T	5888.23	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.267;DP=3125;Dels=0.00;FS=7.085;HRun=1;HaplotypeScore=6.7134;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.520;QD=41.76;ReadPosRankSum=0.297;SB=-2505.64	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:163,0:163:99:0,491,6807	0/0:83,0:83:99:0,250,3466	1/1:0,141:141:99:5888,424,0	0/0:91,0:91:99:0,274,3800	0/0:128,0:128:99:0,385,5345	0/0:158,0:158:99:0,476,6598	0/0:123,0:123:99:0,370,5137	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:158,0:158:99:0,476,6598	0/0:184,0:184:99:0,554,7684	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:179,0:179:99:0,539,7475	0/0:71,0:71:99:0,214,2965	0/0:158,0:158:99:0,476,6598
gi|293339394|gb|GU595196.1|	104793	.	T	G	6556.39	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.761;DP=3130;Dels=0.00;FS=3.352;HRun=3;HaplotypeScore=6.3801;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.050;QD=41.76;ReadPosRankSum=-1.605;SB=-3173.80	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:158,0:158:99:0,476,6598	1/1:0,88:88:99:3675,265,0	0/0:143,0:143:99:0,430,5972	0/0:89,0:89:99:0,268,3717	0/0:126,0:126:99:0,379,5262	0/0:166,0:166:99:0,500,6932	0/0:123,0:123:99:0,370,5137	0/0:163,0:163:99:0,491,6807	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	0/0:187,0:187:99:0,563,7809	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:177,0:177:99:0,533,7392	1/1:0,69:69:99:2881,208,0	0/0:162,0:162:99:0,488,6765
gi|293339394|gb|GU595196.1|	104853	.	G	T	4593.66	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.189;DP=3262;Dels=0.00;FS=0.348;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.114;QD=41.76;ReadPosRankSum=-1.030;SB=-2296.84	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:104,0:104:99:0,313,4343	0/0:137,0:137:99:0,412,5721	0/0:82,0:82:99:0,247,3424	0/0:98,0:98:99:0,295,4093	0/0:183,0:183:99:0,551,7642	1/1:0,110:110:99:4594,331,0	0/0:192,0:192:99:0,578,8018	0/0:184,0:184:99:0,554,7684	0/0:199,0:199:99:0,599,8310	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:185,0:185:99:0,557,7726	0/0:79,0:79:99:0,238,3299	0/0:190,0:190:99:0,572,7934
gi|293339394|gb|GU595196.1|	104883	.	C	T	5804.71	.	AC=4;AF=0.095;AN=42;BaseQRankSum=1.264;DP=3112;Dels=0.00;FS=15.274;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.082;QD=41.76;ReadPosRankSum=0.575;SB=-2296.84	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:149,0:149:99:0,448,6222	1/1:0,74:74:99:3090,223,0	0/0:123,0:123:99:0,370,5137	0/0:80,0:80:99:0,241,3341	0/0:99,0:99:99:0,298,4134	0/0:165,0:165:99:0,497,6890	0/0:104,0:104:99:0,313,4343	0/0:160,0:160:99:0,482,6682	0/0:191,0:191:99:0,575,7976	0/0:189,0:189:99:0,569,7893	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:151,0:151:99:0,455,6306	0/0:171,0:171:99:0,515,7141	0/0:176,0:176:99:0,530,7350	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:191,0:191:99:0,575,7976	1/1:0,65:65:99:2714,196,0	0/0:167,0:167:99:0,503,6974
gi|293339394|gb|GU595196.1|	104922	.	T	C	4677.18	.	AC=8;AF=0.200;AN=40;BaseQRankSum=2.485;DP=2614;Dels=0.00;FS=18.087;HRun=1;HaplotypeScore=2.4997;InbreedingCoeff=0.9462;MQ=254.00;MQ0=0;MQRankSum=1.259;QD=41.76;ReadPosRankSum=-5.771;SB=-1879.23	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:160,0:160:99:0,482,6682	1/1:0,1:1:3.01:42,3,0	1/1:0,27:27:81.27:1128,81,0	0/0:97,0:97:99:0,292,4051	0/0:106,0:106:99:0,319,4427	0/0:153,0:153:99:0,461,6389	1/1:0,52:52:99:2172,157,0	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:153,0:153:99:0,461,6389	0/0:176,0:176:99:0,530,7350	0/0:179,0:179:99:0,539,7475	0/0:158,0:158:99:0,476,6598	0/0:138,0:138:99:0,415,5763	0/0:153,0:153:99:0,461,6389	0/0:150,0:150:99:0,452,6264	0/0:175,0:175:99:0,527,7308	0/0:185,0:185:99:0,557,7726	./.	1/1:0,32:32:96.32:1336,96,0
gi|293339394|gb|GU595196.1|	104923	.	G	A	2003.33	.	AC=4;AF=0.105;AN=38;BaseQRankSum=0.266;DP=2588;Dels=0.00;FS=11.998;HRun=0;HaplotypeScore=2.6312;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.374;QD=40.07;ReadPosRankSum=-8.979;SB=-793.45	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	./.	1/1:0,23:23:69.23:960,69,0	0/0:93,0:93:99:0,280,3884	0/0:108,0:108:99:0,325,4510	0/0:155,0:155:99:0,467,6473	0/0:51,0:51:99:0,154,2130	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:136,0:136:99:0,409,5679	0/0:153,0:153:99:0,461,6389	0/0:149,0:149:99:0,448,6222	0/0:178,0:178:99:0,536,7433	0/0:181,0:181:99:0,545,7559	./.	1/1:0,27:27:81.27:1128,81,0
gi|293339394|gb|GU595196.1|	104930	.	C	T	4760.70	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.221;DP=2606;Dels=0.00;FS=28.280;HRun=0;HaplotypeScore=1.9521;InbreedingCoeff=0.9985;MQ=254.00;MQ0=0;MQRankSum=-1.463;QD=41.76;ReadPosRankSum=-9.646;SB=-1711.83	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:163,0:163:99:0,491,6807	1/1:0,7:7:21.07:292,21,0	1/1:0,17:17:51.17:710,51,0	0/0:96,0:96:99:0,289,4009	0/0:102,0:102:99:0,307,4260	0/0:172,0:172:99:0,518,7183	1/1:0,58:58:99:2422,175,0	0/0:163,0:163:99:0,491,6807	0/0:179,0:179:99:0,539,7475	0/0:147,0:147:99:0,442,6139	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	0/0:141,0:141:99:0,424,5888	0/0:152,0:152:99:0,458,6348	0/0:149,0:149:99:0,448,6222	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	1/1:0,8:8:24.08:334,24,0	1/1:0,24:24:72.24:1002,72,0
gi|293339394|gb|GU595196.1|	104937	.	T	A	4468.37	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.042;DP=2685;Dels=0.00;FS=65.299;HRun=0;HaplotypeScore=1.9521;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.491;QD=41.76;ReadPosRankSum=-6.777;SB=-1169.29	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	1/1:0,15:15:45.15:626,45,0	1/1:0,32:32:96.32:1336,96,0	0/0:88,0:88:99:0,265,3675	0/0:104,0:104:99:0,313,4343	0/0:174,0:174:99:0,524,7266	0/0:55,0:55:99:0,166,2297	0/0:174,0:174:99:0,524,7266	0/0:181,0:181:99:0,545,7559	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	0/0:140,0:140:99:0,421,5846	0/0:150,0:150:99:0,452,6264	0/0:151,0:151:99:0,455,6306	0/0:186,0:186:99:0,560,7767	0/0:165,0:165:99:0,497,6890	1/1:0,13:13:39.13:543,39,0	1/1:0,47:47:99:1963,141,0
gi|293339394|gb|GU595196.1|	104955	.	T	C	2860.88	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.906;DP=2783;Dels=0.00;FS=7.387;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.518;QD=40.87;ReadPosRankSum=2.431;SB=-1169.31	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:178,0:178:99:0,536,7433	0/0:39,0:39:99:0,117,1629	0/0:68,0:68:99:0,205,2840	0/0:79,0:79:99:0,238,3299	0/0:111,0:111:99:0,334,4635	0/0:194,0:194:99:0,584,8102	1/1:0,70:70:99:2923,211,0	0/0:159,0:159:99:0,479,6640	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	0/0:138,0:138:99:0,415,5763	0/0:153,0:153:99:0,461,6389	0/0:152,0:152:99:0,458,6348	0/0:139,0:139:99:0,418,5805	0/0:171,0:171:99:0,515,7141	0/0:151,0:151:99:0,455,6306	0/0:173,0:173:99:0,521,7225	0/0:190,0:190:99:0,572,7934	0/0:26,0:26:78.26:0,78,1086	0/0:96,0:96:99:0,289,4009
gi|293339394|gb|GU595196.1|	104985	.	C	T	9479.61	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.377;DP=3073;Dels=0.00;FS=186.557;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.252;QD=41.76;ReadPosRankSum=0.413;SB=-1920.99	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:174,0:174:99:0,524,7266	0/0:74,0:74:99:0,223,3090	1/1:0,88:88:99:3675,265,0	0/0:93,0:93:99:0,280,3884	0/0:98,0:98:99:0,295,4093	0/0:184,0:184:99:0,554,7684	0/0:127,0:127:99:0,382,5304	0/0:158,0:158:99:0,476,6598	0/0:179,0:179:99:0,539,7475	0/0:157,0:157:99:0,473,6556	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:185,0:185:99:0,557,7726	0/0:204,0:204:99:0,614,8519	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:188,0:188:99:0,566,7851	0/0:45,0:45:99:0,135,1879	1/1:0,139:139:99:5805,418,0
gi|293339394|gb|GU595196.1|	105030	.	C	T	20504.34	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.287;DP=3066;Dels=0.00;FS=123.988;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.111;QD=41.76;ReadPosRankSum=-1.125;SB=-6431.11	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:161,0:161:99:0,485,6723	1/1:0,80:80:99:3341,241,0	1/1:0,99:99:99:4134,298,0	0/0:93,0:93:99:0,280,3884	0/0:100,0:100:99:0,301,4176	0/0:178,0:178:99:0,536,7433	1/1:0,119:119:99:4969,358,0	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	0/0:158,0:158:99:0,476,6598	0/0:186,0:186:99:0,560,7767	0/0:195,0:195:99:0,587,8143	0/0:190,0:190:99:0,572,7934	0/0:155,0:155:99:0,467,6473	0/0:162,0:162:99:0,488,6765	0/0:187,0:187:99:0,563,7809	1/1:0,58:58:99:2422,175,0	1/1:0,135:135:99:5638,406,0
gi|293339394|gb|GU595196.1|	105063	.	A	G	2819.12	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.321;DP=2962;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.704;QD=40.86;ReadPosRankSum=2.214;SB=-1378.11	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:153,0:153:99:0,461,6389	0/0:71,0:71:99:0,214,2965	0/0:112,0:112:99:0,337,4677	0/0:68,0:68:99:0,205,2840	0/0:91,0:91:99:0,274,3800	0/0:172,0:172:99:0,518,7183	1/1:0,69:69:99:2881,208,0	0/0:156,0:156:99:0,470,6515	0/0:167,0:167:99:0,503,6974	0/0:156,0:156:99:0,470,6515	0/0:163,0:163:99:0,491,6807	0/0:190,0:190:99:0,572,7934	0/0:197,0:197:99:0,593,8227	0/0:153,0:153:99:0,461,6389	0/0:169,0:169:99:0,509,7057	0/0:139,0:139:99:0,418,5805	0/0:192,0:192:99:0,578,8018	0/0:193,0:193:99:0,581,8060	0/0:56,0:56:99:0,169,2339	0/0:143,0:143:99:0,430,5972
gi|293339394|gb|GU595196.1|	105075	.	C	T	1566.31	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.368;DP=2930;Dels=0.00;FS=4.691;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.061;QD=40.16;ReadPosRankSum=-1.311;SB=-709.94	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:50,0:50:99:0,151,2088	0/0:89,0:89:99:0,268,3717	0/0:72,0:72:99:0,217,3007	0/0:97,0:97:99:0,292,4051	0/0:166,0:166:99:0,500,6932	1/1:0,39:39:99:1629,117,0	0/0:166,0:166:99:0,500,6932	0/0:188,0:188:99:0,566,7851	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:179,0:179:99:0,539,7475	0/0:195,0:195:99:0,587,8143	0/0:167,0:167:99:0,503,6974	0/0:157,0:157:99:0,473,6556	0/0:154,0:154:99:0,464,6431	0/0:192,0:192:99:0,578,8018	0/0:188,0:188:99:0,566,7851	0/0:44,0:44:99:0,132,1837	0/0:116,0:116:99:0,349,4844
gi|293339394|gb|GU595196.1|	105093	.	A	T	6305.83	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.797;DP=2723;Dels=0.00;FS=6.181;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.026;QD=41.76;ReadPosRankSum=-5.583;SB=-2756.19	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:171,0:171:99:0,515,7141	1/1:0,26:26:78.26:1086,78,0	1/1:0,54:54:99:2255,163,0	0/0:74,0:74:99:0,223,3090	0/0:97,0:97:99:0,292,4051	0/0:172,0:172:99:0,518,7183	./.	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:144,0:144:99:0,433,6013	0/0:185,0:185:99:0,557,7726	0/0:186,0:186:99:0,560,7767	1/1:0,22:22:66.22:919,66,0	1/1:0,49:49:99:2046,147,0
gi|293339394|gb|GU595196.1|	105094	.	G	A	5971.75	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.004;DP=2725;Dels=0.00;FS=3.080;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9960;MQ=254.00;MQ0=0;MQRankSum=1.125;QD=41.76;ReadPosRankSum=-6.056;SB=-2708.63	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	1/1:0,23:23:69.23:960,69,0	1/1:0,52:52:99:2172,157,0	0/0:78,0:78:99:0,235,3257	0/0:99,0:99:99:0,298,4134	0/0:172,0:172:99:0,518,7183	1/1:0,5:5:15.05:209,15,0	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	0/0:184,0:184:99:0,554,7684	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:179,0:179:99:0,539,7475	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:144,0:144:99:0,433,6013	0/0:181,0:181:99:0,545,7559	0/0:185,0:185:99:0,557,7726	1/1:0,19:19:57.19:793,57,0	1/1:0,44:44:99:1837,132,0
gi|293339394|gb|GU595196.1|	105111	.	G	A	3633.17	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.559;DP=2663;Dels=0.00;FS=9.873;HRun=2;HaplotypeScore=0.8094;InbreedingCoeff=0.9187;MQ=254.00;MQ0=0;MQRankSum=-0.815;QD=41.76;ReadPosRankSum=-3.805;SB=-1530.83	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:187,0:187:99:0,563,7809	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	0/0:82,0:82:99:0,247,3424	0/0:98,0:98:99:0,295,4093	0/0:177,0:177:99:0,533,7392	1/1:0,70:70:99:2923,211,0	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:182,0:182:99:0,548,7600	0/0:177,0:177:99:0,533,7392	0/0:158,0:158:99:0,476,6598	0/0:150,0:150:99:0,452,6264	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:188,0:188:99:0,566,7851	1/1:0,4:4:12.04:167,12,0	1/1:0,10:10:30.10:418,30,0
gi|293339394|gb|GU595196.1|	105120	.	C	T	3179.35	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.455;DP=2773;Dels=0.00;FS=10.654;HRun=0;HaplotypeScore=3.7614;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.936;QD=40.24;ReadPosRankSum=-4.527;SB=-1377.30	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:186,0:186:99:0,560,7767	1/1:0,12:12:36.12:501,36,0	1/1:0,19:19:57.19:793,57,0	0/0:87,0:87:99:0,262,3633	0/0:101,0:101:99:0,304,4218	0/0:171,0:171:99:0,515,7141	0/0:107,0:107:99:0,322,4468	0/0:162,0:162:99:0,488,6765	0/0:161,0:161:99:0,485,6723	0/0:186,0:186:99:0,560,7767	0/0:183,0:183:99:0,551,7642	0/0:155,0:155:99:0,467,6473	0/0:138,0:138:99:0,415,5763	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:194,0:194:99:0,584,8102	0/0:180,0:180:99:0,542,7517	1/1:0,14:14:42.14:585,42,0	1/1:0,34:34:99:1420,102,0
gi|293339394|gb|GU595196.1|	105147	.	T	C	14991.98	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.186;DP=2939;Dels=0.00;FS=16.818;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.022;QD=41.76;ReadPosRankSum=7.277;SB=-6765.17	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:180,0:180:99:0,542,7517	1/1:0,22:22:66.22:919,66,0	1/1:0,38:38:99:1587,114,0	0/0:99,0:99:99:0,298,4134	0/0:111,0:111:99:0,334,4635	0/0:167,0:167:99:0,503,6974	1/1:0,169:169:99:7057,509,0	0/0:161,0:161:99:0,485,6723	0/0:166,0:166:99:0,500,6932	0/0:160,0:160:99:0,482,6682	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	0/0:159,0:159:99:0,479,6640	0/0:140,0:140:99:0,421,5846	0/0:179,0:179:99:0,539,7475	0/0:181,0:181:99:0,545,7559	0/0:186,0:186:99:0,560,7767	0/0:187,0:187:99:0,563,7809	1/1:0,19:19:57.19:793,57,0	1/1:0,111:111:99:4635,334,0
gi|293339394|gb|GU595196.1|	105174	.	G	A	529.55	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-2.508;DP=2748;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9654;MQ=254.00;MQ0=0;MQRankSum=-0.499;QD=35.30;ReadPosRankSum=-6.033;SB=-282.36	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:151,0:151:99:0,455,6306	1/1:0,3:3:9.03:125,9,0	1/1:0,8:8:24.08:334,24,0	0/0:104,0:104:99:0,313,4343	0/0:112,0:112:99:0,337,4677	0/0:184,0:184:99:0,554,7684	0/0:71,0:71:99:0,214,2965	0/0:150,0:150:99:0,452,6264	0/0:164,0:164:99:0,494,6849	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:153,0:153:99:0,461,6389	0/0:193,0:193:99:0,581,8060	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:187,0:187:99:0,563,7809	1/1:0,4:4:12.04:167,12,0	0/0:80,0:80:99:0,241,3341
gi|293339394|gb|GU595196.1|	105189	.	C	A	1711.99	.	AC=4;AF=0.111;AN=36;BaseQRankSum=1.441;DP=2589;Dels=0.00;FS=3.519;HRun=0;HaplotypeScore=0.1666;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.500;QD=39.81;ReadPosRankSum=-7.611;SB=-793.11	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:151,0:151:99:0,455,6306	./.	./.	0/0:99,0:99:99:0,298,4134	0/0:97,0:97:99:0,292,4051	0/0:182,0:182:99:0,548,7600	1/1:0,20:20:60.20:835,60,0	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:162,0:162:99:0,488,6765	0/0:184,0:184:99:0,554,7684	0/0:161,0:161:99:0,485,6723	0/0:186,0:186:99:0,560,7767	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	0/0:175,0:175:99:0,527,7308	./.	1/1:0,23:23:69.23:960,69,0
gi|293339394|gb|GU595196.1|	105195	.	T	A,G	893.44	.	AC=2,2;AF=0.056,0.056;AN=36;BaseQRankSum=-2.690;DP=2528;Dels=0.00;FS=5.463;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.437;QD=37.23;ReadPosRankSum=-6.539;SB=-369.27	GT:AD:DP:GQ:PL	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:139,0,0:139:99:0,418,5805,418,5805,5805	./.	./.	0/0:91,0,0:91:99:0,274,3800,274,3800,3800	0/0:91,0,0:91:99:0,274,3800,274,3800,3800	0/0:179,0,0:179:99:0,539,7475,539,7475,7475	2/2:0,0,22:22:66.22:919,919,919,66,66,0	0/0:153,0,0:153:99:0,461,6389,461,6389,6389	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:155,0,0:155:99:0,467,6473,467,6473,6473	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:150,0,0:150:99:0,452,6264,452,6264,6264	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	0/0:178,0,0:178:99:0,536,7433,536,7433,7433	0/0:191,0,0:191:99:0,575,7976,575,7976,7976	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:154,0,0:154:99:0,464,6431,464,6431,6431	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	./.	1/1:0,2,0:2:6.02:84,6,0,84,6,84
gi|293339394|gb|GU595196.1|	105198	.	A	C	900.01	.	AC=2;AF=0.059;AN=34;BaseQRankSum=0.266;DP=2543;Dels=0.00;FS=10.358;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.443;QD=39.13;ReadPosRankSum=-4.850;SB=-292.34	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:139,0:139:99:0,418,5805	./.	./.	0/0:89,0:89:99:0,268,3717	0/0:96,0:96:99:0,289,4009	0/0:180,0:180:99:0,542,7517	1/1:0,23:23:69.23:960,69,0	0/0:152,0:152:99:0,458,6348	0/0:175,0:175:99:0,527,7308	0/0:152,0:152:99:0,458,6348	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:191,0:191:99:0,575,7976	0/0:167,0:167:99:0,503,6974	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	./.	./.
gi|293339394|gb|GU595196.1|	105216	.	C	T	232.44	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.093;DP=2543;Dels=0.00;FS=9.011;HRun=0;HaplotypeScore=0.6666;InbreedingCoeff=0.7361;MQ=254.00;MQ0=0;MQRankSum=1.534;QD=33.21;ReadPosRankSum=-4.191;SB=-39.84	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:155,0:155:99:0,467,6473	0/0:3,0:3:9.03:0,9,125	0/0:2,0:2:6.02:0,6,84	0/0:99,0:99:99:0,298,4134	0/0:85,0:85:99:0,256,3550	0/0:173,0:173:99:0,521,7225	0/0:67,0:67:99:0,202,2798	0/0:146,0:146:99:0,439,6097	0/0:162,0:162:99:0,488,6765	0/0:149,0:149:99:0,448,6222	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:152,0:152:99:0,458,6348	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:186,0:186:99:0,560,7767	0/0:166,0:166:99:0,500,6932	0/0:154,0:154:99:0,464,6431	0/0:1,0:1:3.01:0,3,42	1/1:0,7:7:21.07:292,21,0
gi|293339394|gb|GU595196.1|	105219	.	G	T	439.24	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.027;DP=2571;Dels=0.00;FS=8.361;HRun=1;HaplotypeScore=0.5714;InbreedingCoeff=0.7398;MQ=254.00;MQ0=0;MQRankSum=-0.869;QD=36.60;ReadPosRankSum=-4.372;SB=-124.07	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	0/0:3,0:3:9.03:0,9,125	0/0:2,0:2:6.02:0,6,84	0/0:98,0:98:99:0,295,4093	0/0:87,0:87:99:0,262,3633	0/0:167,0:167:99:0,503,6974	0/0:75,0:75:99:0,226,3132	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:151,0:151:99:0,455,6306	0/0:179,0:179:99:0,539,7475	0/0:165,0:165:99:0,497,6890	0/0:152,0:152:99:0,458,6348	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:193,0:193:99:0,581,8060	0/0:159,0:159:99:0,479,6640	0/0:156,0:156:99:0,470,6515	0/0:1,0:1:3.01:0,3,42	1/1:0,12:12:36.12:501,36,0
gi|293339394|gb|GU595196.1|	105225	.	C	A	168.39	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.976;DP=2653;Dels=0.00;FS=9.155;HRun=0;HaplotypeScore=0.5714;InbreedingCoeff=0.8621;MQ=254.00;MQ0=0;MQRankSum=0.986;QD=28.06;ReadPosRankSum=3.717;SB=-39.09	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	0/0:94,0:94:99:0,283,3925	0/0:100,0:100:99:0,301,4176	0/0:172,0:172:99:0,518,7183	0/0:84,0:84:99:0,253,3508	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:152,0:152:99:0,458,6348	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:190,0:190:99:0,572,7934	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	1/1:0,1:1:3.01:42,3,0	0/0:29,0:29:87.29:0,87,1211
gi|293339394|gb|GU595196.1|	105228	.	G	T	693.74	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.159;DP=2697;Dels=0.00;FS=0.850;HRun=0;HaplotypeScore=0.5714;InbreedingCoeff=0.9761;MQ=254.00;MQ0=0;MQRankSum=-1.122;QD=36.51;ReadPosRankSum=-3.020;SB=-367.39	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:154,0:154:99:0,464,6431	1/1:0,7:7:21.07:292,21,0	1/1:0,9:9:27.09:376,27,0	0/0:95,0:95:99:0,286,3967	0/0:105,0:105:99:0,316,4385	0/0:176,0:176:99:0,530,7350	0/0:93,0:93:99:0,280,3884	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:151,0:151:99:0,455,6306	0/0:178,0:178:99:0,536,7433	0/0:180,0:180:99:0,542,7517	0/0:159,0:159:99:0,479,6640	0/0:150,0:150:99:0,452,6264	0/0:165,0:165:99:0,497,6890	0/0:185,0:185:99:0,557,7726	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	1/1:0,3:3:9.03:125,9,0	0/0:35,0:35:99:0,105,1462
gi|293339394|gb|GU595196.1|	105249	.	C	T	5094.78	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.199;DP=2945;Dels=0.00;FS=11.040;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.535;QD=41.76;ReadPosRankSum=-1.247;SB=-2129.80	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	1/1:0,38:38:99:1587,114,0	1/1:0,51:51:99:2130,154,0	0/0:97,0:97:99:0,292,4051	0/0:106,0:106:99:0,319,4427	0/0:182,0:182:99:0,548,7600	0/0:102,0:102:99:0,307,4260	0/0:165,0:165:99:0,497,6890	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:180,0:180:99:0,542,7517	0/0:189,0:189:99:0,569,7893	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:179,0:179:99:0,539,7475	0/0:183,0:183:99:0,551,7642	1/1:0,33:33:99:1378,99,0	0/0:86,0:86:99:0,259,3591
gi|293339394|gb|GU595196.1|	105282	.	C	T	9187.29	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.756;DP=2979;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.139;QD=41.76;ReadPosRankSum=3.271;SB=-4468.37	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	1/1:0,73:73:99:3049,220,0	1/1:0,83:83:99:3466,250,0	0/0:82,0:82:99:0,247,3424	0/0:110,0:110:99:0,331,4594	0/0:181,0:181:99:0,545,7559	0/0:81,0:81:99:0,244,3383	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	0/0:156,0:156:99:0,470,6515	0/0:183,0:183:99:0,551,7642	0/0:176,0:176:99:0,530,7350	0/0:184,0:184:99:0,554,7684	0/0:192,0:192:99:0,578,8018	0/0:155,0:155:99:0,467,6473	0/0:154,0:154:99:0,464,6431	0/0:174,0:174:99:0,524,7266	0/0:164,0:164:99:0,494,6849	1/1:0,64:64:99:2673,193,0	0/0:105,0:105:99:0,316,4385
gi|293339394|gb|GU595196.1|	105318	.	C	T	1690.75	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.075;DP=2784;Dels=0.00;FS=1.195;HRun=1;HaplotypeScore=2.0473;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.715;QD=39.32;ReadPosRankSum=-7.669;SB=-833.94	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	1/1:0,13:13:39.13:543,39,0	1/1:0,15:15:45.15:626,45,0	0/0:91,0:91:99:0,274,3800	0/0:107,0:107:99:0,322,4468	0/0:159,0:159:99:0,479,6640	0/0:97,0:97:99:0,292,4051	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:150,0:150:99:0,452,6264	0/0:181,0:181:99:0,545,7559	0/0:156,0:156:99:0,470,6515	0/0:183,0:183:99:0,551,7642	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:197,0:197:99:0,593,8227	0/0:150,0:150:99:0,452,6264	0/0:163,0:163:99:0,491,6807	1/1:0,15:15:45.15:626,45,0	0/0:112,0:112:99:0,337,4677
gi|293339394|gb|GU595196.1|	105327	.	T	C	10106.02	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.780;DP=2747;Dels=0.00;FS=8.031;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9995;MQ=254.00;MQ0=0;MQRankSum=-0.261;QD=41.76;ReadPosRankSum=-3.934;SB=-4550.81	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	1/1:0,8:8:24.08:334,24,0	1/1:0,14:14:42.14:585,42,0	0/0:88,0:88:99:0,265,3675	0/0:104,0:104:99:0,313,4343	0/0:161,0:161:99:0,485,6723	1/1:0,104:104:99:4343,313,0	0/0:154,0:154:99:0,464,6431	0/0:165,0:165:99:0,497,6890	0/0:143,0:143:99:0,430,5972	0/0:177,0:177:99:0,533,7392	0/0:156,0:156:99:0,470,6515	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:183,0:183:99:0,551,7642	0/0:149,0:149:99:0,448,6222	0/0:170,0:170:99:0,512,7099	1/1:0,13:13:39.13:543,39,0	1/1:0,103:103:99:4301,310,0
gi|293339394|gb|GU595196.1|	105330	.	A	G	10607.14	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.164;DP=2773;Dels=0.00;FS=11.235;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=1.238;QD=41.76;ReadPosRankSum=-3.704;SB=-4593.43	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	1/1:0,11:11:33.11:459,33,0	1/1:0,20:20:60.20:835,60,0	0/0:88,0:88:99:0,265,3675	0/0:105,0:105:99:0,316,4385	0/0:158,0:158:99:0,476,6598	1/1:0,109:109:99:4552,328,0	0/0:147,0:147:99:0,442,6139	0/0:161,0:161:99:0,485,6723	0/0:148,0:148:99:0,445,6181	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:188,0:188:99:0,566,7851	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	0/0:181,0:181:99:0,545,7559	0/0:150,0:150:99:0,452,6264	0/0:177,0:177:99:0,533,7392	1/1:0,14:14:42.14:585,42,0	1/1:0,100:100:99:4176,301,0
gi|293339394|gb|GU595196.1|	105384	.	C	T	3340.85	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.155;DP=2900;Dels=0.00;FS=44.555;HRun=0;HaplotypeScore=2.3806;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.549;QD=41.76;ReadPosRankSum=0.014;SB=-876.99	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:62,0:62:99:0,187,2589	1/1:0,80:80:99:3341,241,0	0/0:98,0:98:99:0,295,4093	0/0:124,0:124:99:0,373,5178	0/0:158,0:158:99:0,476,6598	0/0:100,0:100:99:0,301,4176	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:175,0:175:99:0,527,7308	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	0/0:192,0:192:99:0,578,8018	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:153,0:153:99:0,461,6389	0/0:34,0:34:99:0,102,1420	0/0:60,0:60:99:0,181,2506
gi|293339394|gb|GU595196.1|	105390	.	C	T	2025.68	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.354;DP=2903;Dels=0.00;FS=3.224;HRun=0;HaplotypeScore=2.3806;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.898;QD=40.51;ReadPosRankSum=0.684;SB=-876.99	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	0/0:65,0:65:99:0,196,2714	0/0:79,0:79:99:0,238,3299	0/0:104,0:104:99:0,313,4343	0/0:125,0:125:99:0,376,5220	0/0:169,0:169:99:0,509,7057	0/0:96,0:96:99:0,289,4009	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	0/0:183,0:183:99:0,551,7642	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:35,0:35:99:0,105,1462	1/1:0,50:50:99:2088,151,0
gi|293339394|gb|GU595196.1|	105405	.	T	C	1691.59	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.339;DP=2826;Dels=0.00;FS=7.926;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.459;QD=40.28;ReadPosRankSum=-5.885;SB=-626.42	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:71,0:71:99:0,214,2965	0/0:74,0:74:99:0,223,3090	0/0:92,0:92:99:0,277,3842	0/0:110,0:110:99:0,331,4594	0/0:190,0:190:99:0,572,7934	0/0:104,0:104:99:0,313,4343	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:148,0:148:99:0,445,6181	0/0:159,0:159:99:0,479,6640	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:146,0:146:99:0,439,6097	0/0:40,0:40:99:0,120,1670	1/1:0,42:42:99:1754,126,0
gi|293339394|gb|GU595196.1|	105417	.	T	C	14240.29	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.065;DP=2892;Dels=0.00;FS=24.914;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.486;QD=41.76;ReadPosRankSum=0.465;SB=-5804.71	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	1/1:0,70:70:99:2923,211,0	1/1:0,77:77:99:3216,232,0	0/0:112,0:112:99:0,337,4677	0/0:110,0:110:99:0,331,4594	0/0:203,0:203:99:0,611,8477	1/1:0,110:110:99:4594,331,0	0/0:162,0:162:99:0,488,6765	0/0:178,0:178:99:0,536,7433	0/0:141,0:141:99:0,424,5888	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:161,0:161:99:0,485,6723	0/0:136,0:136:99:0,409,5679	0/0:159,0:159:99:0,479,6640	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	1/1:0,41:41:99:1712,123,0	1/1:0,43:43:99:1796,129,0
gi|293339394|gb|GU595196.1|	105432	.	C	T	6389.35	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.102;DP=2918;Dels=0.00;FS=3.911;HRun=1;HaplotypeScore=3.3805;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.657;QD=41.76;ReadPosRankSum=4.777;SB=-3048.52	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:50,0:50:99:0,151,2088	1/1:0,52:52:99:2172,157,0	0/0:109,0:109:99:0,328,4552	0/0:103,0:103:99:0,310,4301	0/0:214,0:214:99:0,644,8937	1/1:0,101:101:99:4218,304,0	0/0:152,0:152:99:0,458,6348	0/0:198,0:198:99:0,596,8269	0/0:145,0:145:99:0,436,6055	0/0:186,0:186:99:0,560,7767	0/0:197,0:197:99:0,593,8227	0/0:157,0:157:99:0,473,6556	0/0:136,0:136:99:0,409,5679	0/0:150,0:150:99:0,452,6264	0/0:163,0:163:99:0,491,6807	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:44,0:44:99:0,132,1837	0/0:86,0:86:99:0,259,3591
gi|293339394|gb|GU595196.1|	105441	.	C	T	2878.49	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.221;DP=2789;Dels=0.00;FS=24.302;HRun=0;HaplotypeScore=3.3805;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.296;QD=40.54;ReadPosRankSum=-0.142;SB=-960.51	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	1/1:0,37:37:99:1545,111,0	0/0:42,0:42:99:0,126,1754	0/0:101,0:101:99:0,304,4218	0/0:95,0:95:99:0,286,3967	0/0:207,0:207:99:0,623,8644	0/0:78,0:78:99:0,235,3257	0/0:143,0:143:99:0,430,5972	0/0:195,0:195:99:0,587,8143	0/0:140,0:140:99:0,421,5846	0/0:173,0:173:99:0,521,7225	0/0:193,0:193:99:0,581,8060	0/0:154,0:154:99:0,464,6431	0/0:138,0:138:99:0,415,5763	0/0:146,0:146:99:0,439,6097	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	1/1:0,34:34:99:1420,102,0	0/0:86,0:86:99:0,259,3591
gi|293339394|gb|GU595196.1|	105465	.	T	C	3674.93	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.331;DP=2620;Dels=0.00;FS=12.945;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9977;MQ=254.00;MQ0=0;MQRankSum=0.962;QD=41.76;ReadPosRankSum=-6.465;SB=-1451.78	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:150,0:150:99:0,452,6264	1/1:0,7:7:21.07:292,21,0	1/1:0,7:7:21.07:292,21,0	0/0:85,0:85:99:0,256,3550	0/0:91,0:91:99:0,274,3800	0/0:185,0:185:99:0,557,7726	1/1:0,17:17:51.17:710,51,0	0/0:135,0:135:99:0,406,5638	0/0:176,0:176:99:0,530,7350	0/0:165,0:165:99:0,497,6890	0/0:182,0:182:99:0,548,7600	0/0:207,0:207:99:0,623,8644	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:145,0:145:99:0,436,6055	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:168,0:168:99:0,506,7016	1/1:0,9:9:27.09:376,27,0	1/1:0,48:48:99:2004,144,0
gi|293339394|gb|GU595196.1|	105474	.	C	T	1025.29	.	AC=2;AF=0.059;AN=34;BaseQRankSum=0.051;DP=2558;Dels=0.00;FS=3.639;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.112;QD=39.43;ReadPosRankSum=-6.115;SB=-459.37	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:145,0:145:99:0,436,6055	./.	./.	0/0:79,0:79:99:0,238,3299	0/0:94,0:94:99:0,283,3925	0/0:171,0:171:99:0,515,7141	./.	0/0:134,0:134:99:0,403,5596	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:174,0:174:99:0,524,7266	0/0:202,0:202:99:0,608,8436	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	0/0:177,0:177:99:0,533,7392	./.	1/1:0,26:26:78.26:1086,78,0
gi|293339394|gb|GU595196.1|	105489	.	G	C	502.37	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.170;DP=2520;Dels=0.00;FS=7.485;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9956;MQ=254.00;MQ0=0;MQRankSum=-0.218;QD=35.88;ReadPosRankSum=-4.926;SB=-163.57	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:150,0:150:99:0,452,6264	1/1:0,7:7:21.07:292,21,0	./.	0/0:86,0:86:99:0,259,3591	0/0:88,0:88:99:0,265,3675	0/0:150,0:150:99:0,452,6264	./.	0/0:147,0:147:99:0,442,6139	0/0:155,0:155:99:0,467,6473	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:179,0:179:99:0,539,7475	0/0:187,0:187:99:0,563,7809	0/0:185,0:185:99:0,557,7726	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	1/1:0,7:7:21.07:292,21,0	./.
gi|293339394|gb|GU595196.1|	105501	.	G	A	2001.53	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.317;DP=2699;Dels=0.00;FS=4.980;HRun=2;HaplotypeScore=1.8093;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.690;QD=40.03;ReadPosRankSum=-5.599;SB=-876.97	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:151,0:151:99:0,455,6306	0/0:29,0:29:87.29:0,87,1211	1/1:0,23:23:69.23:960,69,0	0/0:88,0:88:99:0,265,3675	0/0:99,0:99:99:0,298,4134	0/0:145,0:145:99:0,436,6055	1/1:0,27:27:81.27:1128,81,0	0/0:146,0:146:99:0,439,6097	0/0:160,0:160:99:0,482,6682	0/0:181,0:181:99:0,545,7559	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:197,0:197:99:0,593,8227	0/0:188,0:188:99:0,566,7851	0/0:173,0:173:99:0,521,7225	0/0:158,0:158:99:0,476,6598	0/0:183,0:183:99:0,551,7642	0/0:180,0:180:99:0,542,7517	0/0:24,0:24:72.24:0,72,1002	0/0:38,0:38:99:0,114,1587
gi|293339394|gb|GU595196.1|	105507	.	C	T	2443.28	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.108;DP=2753;Dels=0.00;FS=22.448;HRun=1;HaplotypeScore=2.3806;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.627;QD=40.72;ReadPosRankSum=-4.343;SB=-793.47	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:43,0:43:99:0,129,1796	0/0:40,0:40:99:0,120,1670	0/0:90,0:90:99:0,271,3758	0/0:93,0:93:99:0,280,3884	0/0:147,0:147:99:0,442,6139	0/0:37,0:37:99:0,111,1545	0/0:145,0:145:99:0,436,6055	0/0:162,0:162:99:0,488,6765	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:192,0:192:99:0,578,8018	0/0:192,0:192:99:0,578,8018	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	0/0:35,0:35:99:0,105,1462	1/1:0,60:60:99:2506,181,0
gi|293339394|gb|GU595196.1|	105528	.	G	A	18040.48	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.639;DP=3020;Dels=0.00;FS=31.455;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.671;QD=41.76;ReadPosRankSum=5.728;SB=-7475.12	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:162,0:162:99:0,488,6765	1/1:0,75:75:99:3132,226,0	1/1:0,78:78:99:3257,235,0	0/0:87,0:87:99:0,262,3633	0/0:107,0:107:99:0,322,4468	0/0:170,0:170:99:0,512,7099	1/1:0,102:102:99:4260,307,0	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:148,0:148:99:0,445,6181	0/0:183,0:183:99:0,551,7642	0/0:192,0:192:99:0,578,8018	0/0:178,0:178:99:0,536,7433	0/0:177,0:177:99:0,533,7392	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	1/1:0,53:53:99:2213,160,0	1/1:0,124:124:99:5178,373,0
gi|293339394|gb|GU595196.1|	105600	.	C	G	7433.36	.	AC=10;AF=0.238;AN=42;BaseQRankSum=1.449;DP=2781;Dels=0.00;FS=58.992;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.126;QD=41.76;ReadPosRankSum=-8.042;SB=-2338.58	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:184,0:184:99:0,554,7684	1/1:0,33:33:99:1378,99,0	1/1:0,36:36:99:1503,108,0	0/0:110,0:110:99:0,331,4594	0/0:94,0:94:99:0,283,3925	0/0:204,0:204:99:0,614,8519	1/1:0,47:47:99:1963,141,0	0/0:166,0:166:99:0,500,6932	0/0:184,0:184:99:0,554,7684	0/0:143,0:143:99:0,430,5972	0/0:194,0:194:99:0,584,8102	0/0:188,0:188:99:0,566,7851	0/0:169,0:169:99:0,509,7057	0/0:144,0:144:99:0,433,6013	0/0:177,0:177:99:0,533,7392	0/0:148,0:148:99:0,445,6181	0/0:164,0:164:99:0,494,6849	0/0:154,0:154:99:0,464,6431	1/1:0,15:15:45.15:626,45,0	1/1:0,47:47:99:1963,141,0
gi|293339394|gb|GU595196.1|	105615	.	A	T	5387.10	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.593;DP=2739;Dels=0.00;FS=38.710;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.976;QD=41.76;ReadPosRankSum=-8.892;SB=-1753.89	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:172,0:172:99:0,518,7183	1/1:0,23:23:69.23:960,69,0	1/1:0,35:35:99:1462,105,0	0/0:114,0:114:99:0,343,4761	0/0:91,0:91:99:0,274,3800	0/0:187,0:187:99:0,563,7809	1/1:0,32:32:96.32:1336,96,0	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	0/0:148,0:148:99:0,445,6181	0/0:208,0:208:99:0,626,8686	0/0:192,0:192:99:0,578,8018	0/0:172,0:172:99:0,518,7183	0/0:156,0:156:99:0,470,6515	0/0:188,0:188:99:0,566,7851	0/0:148,0:148:99:0,445,6181	0/0:148,0:148:99:0,445,6181	0/0:163,0:163:99:0,491,6807	1/1:0,13:13:39.13:543,39,0	1/1:0,26:26:78.26:1086,78,0
gi|293339394|gb|GU595196.1|	105618	.	T	C	4718.94	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.686;DP=2684;Dels=0.00;FS=22.913;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.505;QD=41.76;ReadPosRankSum=-3.523;SB=-1712.17	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	1/1:0,22:22:66.22:919,66,0	1/1:0,30:30:90.30:1253,90,0	0/0:115,0:115:99:0,346,4802	0/0:88,0:88:99:0,265,3675	0/0:179,0:179:99:0,539,7475	1/1:0,27:27:81.27:1128,81,0	0/0:165,0:165:99:0,497,6890	0/0:182,0:182:99:0,548,7600	0/0:152,0:152:99:0,458,6348	0/0:204,0:204:99:0,614,8519	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	0/0:187,0:187:99:0,563,7809	0/0:146,0:146:99:0,439,6097	0/0:155,0:155:99:0,467,6473	0/0:162,0:162:99:0,488,6765	1/1:0,15:15:45.15:626,45,0	1/1:0,19:19:57.19:793,57,0
gi|293339394|gb|GU595196.1|	105663	.	T	C	1482.79	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.205;DP=2857;Dels=0.00;FS=4.926;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.854;QD=40.08;ReadPosRankSum=2.780;SB=-626.42	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:166,0:166:99:0,500,6932	0/0:56,0:56:99:0,169,2339	0/0:62,0:62:99:0,187,2589	0/0:86,0:86:99:0,259,3591	0/0:99,0:99:99:0,298,4134	0/0:182,0:182:99:0,548,7600	0/0:64,0:64:99:0,193,2673	0/0:156,0:156:99:0,470,6515	0/0:170,0:170:99:0,512,7099	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:169,0:169:99:0,509,7057	0/0:181,0:181:99:0,545,7559	0/0:153,0:153:99:0,461,6389	0/0:160,0:160:99:0,482,6682	0/0:189,0:189:99:0,569,7893	0/0:37,0:37:99:0,111,1545	1/1:0,37:37:99:1545,111,0
gi|293339394|gb|GU595196.1|	105675	.	C	G	1023.43	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.371;DP=2801;Dels=0.00;FS=3.583;HRun=2;HaplotypeScore=1.2379;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.593;QD=39.36;ReadPosRankSum=-3.616;SB=-459.37	GT:AD:DP:GQ:PL	0/0:195,0:195:99:0,587,8143	0/0:162,0:162:99:0,488,6765	0/0:51,0:51:99:0,154,2130	0/0:47,0:47:99:0,141,1963	0/0:67,0:67:99:0,202,2798	0/0:97,0:97:99:0,292,4051	0/0:184,0:184:99:0,554,7684	0/0:48,0:48:99:0,144,2004	0/0:147,0:147:99:0,442,6139	0/0:160,0:160:99:0,482,6682	0/0:185,0:185:99:0,557,7726	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:181,0:181:99:0,545,7559	0/0:180,0:180:99:0,542,7517	0/0:157,0:157:99:0,473,6556	0/0:161,0:161:99:0,485,6723	0/0:182,0:182:99:0,548,7600	0/0:40,0:40:99:0,120,1670	1/1:0,26:26:78.26:1086,78,0
gi|293339394|gb|GU595196.1|	105681	.	G	A	11484.11	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.826;DP=2784;Dels=0.00;FS=2.795;HRun=0;HaplotypeScore=1.5712;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.659;QD=41.76;ReadPosRankSum=1.085;SB=-5512.38	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:172,0:172:99:0,518,7183	0/0:51,0:51:99:0,154,2130	1/1:0,41:41:99:1712,123,0	0/0:67,0:67:99:0,202,2798	0/0:93,0:93:99:0,280,3884	0/0:184,0:184:99:0,554,7684	1/1:0,40:40:99:1670,120,0	0/0:138,0:138:99:0,415,5763	0/0:152,0:152:99:0,458,6348	0/0:181,0:181:99:0,545,7559	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	1/1:0,194:194:99:8102,584,0	0/0:197,0:197:99:0,593,8227	0/0:155,0:155:99:0,467,6473	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	0/0:42,0:42:99:0,126,1754	0/0:33,0:33:99:0,99,1378
gi|293339394|gb|GU595196.1|	105691	.	C	A	1566.31	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.221;DP=2788;Dels=0.00;FS=7.015;HRun=0;HaplotypeScore=1.8569;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.079;QD=40.16;ReadPosRankSum=-2.895;SB=-626.42	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:169,0:169:99:0,509,7057	0/0:53,0:53:99:0,160,2213	0/0:34,0:34:99:0,102,1420	0/0:72,0:72:99:0,217,3007	0/0:92,0:92:99:0,277,3842	0/0:182,0:182:99:0,548,7600	0/0:30,0:30:90.30:0,90,1253	0/0:135,0:135:99:0,406,5638	0/0:161,0:161:99:0,485,6723	0/0:184,0:184:99:0,554,7684	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	0/0:185,0:185:99:0,557,7726	0/0:184,0:184:99:0,554,7684	0/0:181,0:181:99:0,545,7559	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:51,0:51:99:0,154,2130	1/1:0,39:39:99:1629,117,0
gi|293339394|gb|GU595196.1|	105705	.	C	G	790.91	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.838;DP=2780;Dels=0.00;FS=4.147;HRun=2;HaplotypeScore=0.9999;InbreedingCoeff=0.9989;MQ=254.00;MQ0=0;MQRankSum=0.462;QD=37.66;ReadPosRankSum=-0.373;SB=-331.44	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:166,0:166:99:0,500,6932	0/0:61,0:61:99:0,184,2547	1/1:0,13:13:39.13:543,39,0	0/0:64,0:64:99:0,193,2673	0/0:95,0:95:99:0,286,3967	0/0:174,0:174:99:0,524,7266	1/1:0,8:8:24.08:334,24,0	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:180,0:180:99:0,542,7517	0/0:182,0:182:99:0,548,7600	0/0:176,0:176:99:0,530,7350	0/0:183,0:183:99:0,551,7642	0/0:186,0:186:99:0,560,7767	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	0/0:164,0:164:99:0,494,6849	0/0:158,0:158:99:0,476,6598	0/0:55,0:55:99:0,166,2297	0/0:75,0:75:99:0,226,3132
gi|293339394|gb|GU595196.1|	105708	.	C	T	8519.13	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.510;DP=2772;Dels=0.00;FS=14.598;HRun=0;HaplotypeScore=0.5237;InbreedingCoeff=0.9848;MQ=254.00;MQ0=0;MQRankSum=0.805;QD=41.76;ReadPosRankSum=2.527;SB=-3507.51	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:168,0:168:99:0,506,7016	1/1:0,63:63:99:2631,190,0	1/1:0,8:8:24.08:334,24,0	0/0:65,0:65:99:0,196,2714	0/0:95,0:95:99:0,286,3967	0/0:176,0:176:99:0,530,7350	1/1:0,3:3:9.03:125,9,0	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:179,0:179:99:0,539,7475	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:189,0:189:99:0,569,7893	0/0:184,0:184:99:0,554,7684	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	1/1:0,50:50:99:2088,151,0	1/1:0,80:80:99:3341,241,0
gi|293339394|gb|GU595196.1|	105736	.	C	T	5637.66	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.478;DP=3022;Dels=0.00;FS=11.892;HRun=1;HaplotypeScore=1.2855;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.399;QD=41.76;ReadPosRankSum=0.710;SB=-2296.84	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:81,0:81:99:0,244,3383	1/1:0,69:69:99:2881,208,0	0/0:85,0:85:99:0,256,3550	0/0:98,0:98:99:0,295,4093	0/0:178,0:178:99:0,536,7433	1/1:0,66:66:99:2756,199,0	0/0:188,0:188:99:0,566,7851	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/0:176,0:176:99:0,530,7350	0/0:159,0:159:99:0,479,6640	0/0:184,0:184:99:0,554,7684	0/0:189,0:189:99:0,569,7893	0/0:183,0:183:99:0,551,7642	0/0:177,0:177:99:0,533,7392	0/0:186,0:186:99:0,560,7767	0/0:176,0:176:99:0,530,7350	0/0:30,0:30:90.30:0,90,1253	0/0:124,0:124:99:0,373,5178
gi|293339394|gb|GU595196.1|	105738	.	G	T	1065.19	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.981;DP=3006;Dels=0.00;FS=3.555;HRun=3;HaplotypeScore=1.2855;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.747;QD=39.45;ReadPosRankSum=1.446;SB=-459.38	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:81,0:81:99:0,244,3383	0/0:74,0:74:99:0,223,3090	0/0:80,0:80:99:0,241,3341	0/0:99,0:99:99:0,298,4134	0/0:180,0:180:99:0,542,7517	0/0:71,0:71:99:0,214,2965	0/0:189,0:189:99:0,569,7893	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:177,0:177:99:0,533,7392	0/0:157,0:157:99:0,473,6556	0/0:185,0:185:99:0,557,7726	0/0:189,0:189:99:0,569,7893	0/0:182,0:182:99:0,548,7600	0/0:170,0:170:99:0,512,7099	0/0:183,0:183:99:0,551,7642	0/0:171,0:171:99:0,515,7141	1/1:0,27:27:81.27:1128,81,0	0/0:119,0:119:99:0,358,4969
gi|293339394|gb|GU595196.1|	105753	.	T	C	19877.94	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.987;DP=3077;Dels=0.00;FS=22.148;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.193;QD=41.76;ReadPosRankSum=0.971;SB=-8602.64	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	1/1:0,93:93:99:3884,280,0	1/1:0,118:118:99:4928,355,0	0/0:91,0:91:99:0,274,3800	0/0:94,0:94:99:0,283,3925	0/0:195,0:195:99:0,587,8143	1/1:0,106:106:99:4427,319,0	0/0:172,0:172:99:0,518,7183	0/0:146,0:146:99:0,439,6097	0/0:184,0:184:99:0,554,7684	0/0:170,0:170:99:0,512,7099	0/0:162,0:162:99:0,488,6765	0/0:189,0:189:99:0,569,7893	0/0:165,0:165:99:0,497,6890	0/0:197,0:197:99:0,593,8227	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:178,0:178:99:0,536,7433	1/1:0,21:21:63.21:877,63,0	1/1:0,138:138:99:5763,415,0
gi|293339394|gb|GU595196.1|	105768	.	C	T	8226.80	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.547;DP=3051;Dels=0.00;FS=9.783;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.000;QD=41.76;ReadPosRankSum=5.632;SB=-3590.95	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	1/1:0,73:73:99:3049,220,0	0/0:141,0:141:99:0,424,5888	0/0:102,0:102:99:0,307,4260	0/0:93,0:93:99:0,280,3884	0/0:198,0:198:99:0,596,8269	0/0:119,0:119:99:0,358,4969	0/0:167,0:167:99:0,503,6974	0/0:149,0:149:99:0,448,6222	0/0:175,0:175:99:0,527,7308	0/0:163,0:163:99:0,491,6807	0/0:177,0:177:99:0,533,7392	0/0:188,0:188:99:0,566,7851	0/0:153,0:153:99:0,461,6389	0/0:207,0:207:99:0,623,8644	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	1/1:0,12:12:36.12:501,36,0	1/1:0,112:112:99:4677,337,0
gi|293339394|gb|GU595196.1|	105789	.	G	A	6013.51	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.728;DP=2875;Dels=0.00;FS=1.741;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.295;QD=41.76;ReadPosRankSum=2.761;SB=-2964.97	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:163,0:163:99:0,491,6807	0/0:43,0:43:99:0,129,1796	1/1:0,78:78:99:3257,235,0	0/0:102,0:102:99:0,307,4260	0/0:93,0:93:99:0,280,3884	0/0:197,0:197:99:0,593,8227	1/1:0,66:66:99:2756,199,0	0/0:157,0:157:99:0,473,6556	0/0:160,0:160:99:0,482,6682	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:192,0:192:99:0,578,8018	0/0:181,0:181:99:0,545,7559	0/0:154,0:154:99:0,464,6431	0/0:197,0:197:99:0,593,8227	0/0:160,0:160:99:0,482,6682	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	0/0:11,0:11:33.11:0,33,459	0/0:68,0:68:99:0,205,2840
gi|293339394|gb|GU595196.1|	105801	.	G	A	1321.62	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.014;DP=2692;Dels=0.00;FS=1.352;HRun=1;HaplotypeScore=1.6188;InbreedingCoeff=0.9600;MQ=254.00;MQ0=0;MQRankSum=0.283;QD=38.87;ReadPosRankSum=-5.134;SB=-665.21	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	1/1:0,13:13:39.13:543,39,0	0/0:46,0:46:99:0,138,1921	0/0:102,0:102:99:0,307,4260	0/0:96,0:96:99:0,289,4009	0/0:174,0:174:99:0,524,7266	0/0:38,0:38:99:0,114,1587	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:184,0:184:99:0,554,7684	0/0:161,0:161:99:0,485,6723	0/0:191,0:191:99:0,575,7976	0/0:156,0:156:99:0,470,6515	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	1/1:0,2:2:6.02:84,6,0	1/1:0,19:19:57.19:793,57,0
gi|293339394|gb|GU595196.1|	105807	.	C	T	2645.81	.	AC=8;AF=0.200;AN=40;BaseQRankSum=0.704;DP=2659;Dels=0.00;FS=2.088;HRun=0;HaplotypeScore=0.3000;InbreedingCoeff=0.9585;MQ=254.00;MQ0=0;MQRankSum=0.880;QD=40.09;ReadPosRankSum=-6.497;SB=-1250.38	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:181,0:181:99:0,545,7559	1/1:0,2:2:6.02:84,6,0	1/1:0,34:34:99:1420,102,0	0/0:97,0:97:99:0,292,4051	0/0:97,0:97:99:0,292,4051	0/0:170,0:170:99:0,512,7099	1/1:0,26:26:78.26:1086,78,0	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:192,0:192:99:0,578,8018	0/0:158,0:158:99:0,476,6598	0/0:151,0:151:99:0,455,6306	0/0:165,0:165:99:0,497,6890	./.	1/1:0,4:4:12.04:167,12,0
gi|293339394|gb|GU595196.1|	105870	.	A	G	9980.74	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.675;DP=2599;Dels=0.00;FS=3.408;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.486;QD=41.76;ReadPosRankSum=-4.763;SB=-4718.41	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	1/1:0,20:20:60.20:835,60,0	./.	0/0:80,0:80:99:0,241,3341	0/0:85,0:85:99:0,256,3550	0/0:147,0:147:99:0,442,6139	1/1:0,19:19:57.19:793,57,0	0/0:164,0:164:99:0,494,6849	1/1:0,166:166:99:6932,500,0	0/0:183,0:183:99:0,551,7642	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:187,0:187:99:0,563,7809	0/0:173,0:173:99:0,521,7225	0/0:190,0:190:99:0,572,7934	0/0:153,0:153:99:0,461,6389	0/0:163,0:163:99:0,491,6807	0/0:164,0:164:99:0,494,6849	1/1:0,15:15:45.15:626,45,0	1/1:0,19:19:57.19:793,57,0
gi|293339394|gb|GU595196.1|	105873	.	T	C	11734.67	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.757;DP=2630;Dels=0.00;FS=3.119;HRun=3;HaplotypeScore=0.6190;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.842;QD=41.76;ReadPosRankSum=-6.141;SB=-5595.71	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	1/1:0,27:27:81.27:1128,81,0	1/1:0,13:13:39.13:543,39,0	0/0:73,0:73:99:0,220,3049	0/0:84,0:84:99:0,253,3508	0/0:158,0:158:99:0,476,6598	1/1:0,22:22:66.22:919,66,0	0/0:162,0:162:99:0,488,6765	1/1:0,166:166:99:6932,500,0	0/0:190,0:190:99:0,572,7934	0/0:160,0:160:99:0,482,6682	0/0:168,0:168:99:0,506,7016	0/0:186,0:186:99:0,560,7767	0/0:170,0:170:99:0,512,7099	0/0:197,0:197:99:0,593,8227	0/0:146,0:146:99:0,439,6097	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	1/1:0,20:20:60.20:835,60,0	1/1:0,33:33:99:1378,99,0
gi|293339394|gb|GU595196.1|	105876	.	C	G	731.11	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.345;DP=2646;Dels=0.00;FS=2.999;HRun=0;HaplotypeScore=0.9046;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.111;QD=38.48;ReadPosRankSum=-5.348;SB=-333.93	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	0/0:33,0:33:99:0,99,1378	1/1:0,19:19:57.19:793,57,0	0/0:71,0:71:99:0,214,2965	0/0:85,0:85:99:0,256,3550	0/0:153,0:153:99:0,461,6389	0/0:26,0:26:78.26:0,78,1086	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	0/0:193,0:193:99:0,581,8060	0/0:153,0:153:99:0,461,6389	0/0:173,0:173:99:0,521,7225	0/0:187,0:187:99:0,563,7809	0/0:166,0:166:99:0,500,6932	0/0:192,0:192:99:0,578,8018	0/0:153,0:153:99:0,461,6389	0/0:156,0:156:99:0,470,6515	0/0:155,0:155:99:0,467,6473	0/0:28,0:28:84.28:0,84,1169	0/0:42,0:42:99:0,126,1754
gi|293339394|gb|GU595196.1|	105960	.	T	C	18207.52	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.717;DP=2993;Dels=0.00;FS=63.395;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.492;QD=41.76;ReadPosRankSum=1.635;SB=-7099.28	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:151,0:151:99:0,455,6306	1/1:0,55:55:99:2297,166,0	1/1:0,117:117:99:4886,352,0	0/0:77,0:77:99:0,232,3216	0/0:98,0:98:99:0,295,4093	0/0:180,0:180:99:0,542,7517	1/1:0,121:121:99:5053,364,0	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:197,0:197:99:0,593,8227	0/0:141,0:141:99:0,424,5888	0/0:161,0:161:99:0,485,6723	0/0:192,0:192:99:0,578,8018	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:175,0:175:99:0,527,7308	0/0:187,0:187:99:0,563,7809	1/1:0,32:32:96.32:1336,96,0	1/1:0,111:111:99:4635,334,0
gi|293339394|gb|GU595196.1|	105978	.	C	T	8644.41	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.092;DP=2960;Dels=0.00;FS=67.747;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.917;QD=41.76;ReadPosRankSum=-8.335;SB=-2756.20	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:143,0:143:99:0,430,5972	1/1:0,50:50:99:2088,151,0	0/0:123,0:123:99:0,370,5137	0/0:89,0:89:99:0,268,3717	0/0:102,0:102:99:0,307,4260	0/0:172,0:172:99:0,518,7183	0/0:107,0:107:99:0,322,4468	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:202,0:202:99:0,608,8436	0/0:144,0:144:99:0,433,6013	0/0:157,0:157:99:0,473,6556	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:181,0:181:99:0,545,7559	1/1:0,37:37:99:1545,111,0	1/1:0,120:120:99:5011,361,0
gi|293339394|gb|GU595196.1|	105990	.	T	C	8435.61	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.492;DP=2933;Dels=0.00;FS=92.825;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.445;QD=41.76;ReadPosRankSum=4.395;SB=-2255.08	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:153,0:153:99:0,461,6389	1/1:0,50:50:99:2088,151,0	0/0:114,0:114:99:0,343,4761	0/0:89,0:89:99:0,268,3717	0/0:110,0:110:99:0,331,4594	0/0:168,0:168:99:0,506,7016	0/0:102,0:102:99:0,307,4260	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:203,0:203:99:0,611,8477	0/0:152,0:152:99:0,458,6348	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	0/0:154,0:154:99:0,464,6431	0/0:156,0:156:99:0,470,6515	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	1/1:0,38:38:99:1587,114,0	1/1:0,114:114:99:4761,343,0
gi|293339394|gb|GU595196.1|	106017	.	G	A	4468.37	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.272;DP=2940;Dels=0.00;FS=51.820;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.168;QD=41.76;ReadPosRankSum=0.441;SB=-1085.79	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:157,0:157:99:0,473,6556	0/0:85,0:85:99:0,256,3550	1/1:0,53:53:99:2213,160,0	0/0:87,0:87:99:0,262,3633	0/0:100,0:100:99:0,301,4176	0/0:184,0:184:99:0,554,7684	1/1:0,54:54:99:2255,163,0	0/0:178,0:178:99:0,536,7433	0/0:160,0:160:99:0,482,6682	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:144,0:144:99:0,433,6013	0/0:166,0:166:99:0,500,6932	0/0:150,0:150:99:0,452,6264	0/0:180,0:180:99:0,542,7517	0/0:157,0:157:99:0,473,6556	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:57,0:57:99:0,172,2380	0/0:164,0:164:99:0,494,6849
gi|293339394|gb|GU595196.1|	106029	.	G	A	5888.23	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.898;DP=2883;Dels=0.00;FS=105.529;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.708;QD=41.76;ReadPosRankSum=-0.820;SB=-1085.79	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:77,0:77:99:0,232,3216	0/0:32,0:32:96.32:0,96,1336	0/0:80,0:80:99:0,241,3341	0/0:100,0:100:99:0,301,4176	0/0:180,0:180:99:0,542,7517	0/0:26,0:26:78.26:0,78,1086	0/0:184,0:184:99:0,554,7684	0/0:152,0:152:99:0,458,6348	0/0:175,0:175:99:0,527,7308	0/0:182,0:182:99:0,548,7600	0/0:159,0:159:99:0,479,6640	0/0:182,0:182:99:0,548,7600	0/0:150,0:150:99:0,452,6264	0/0:175,0:175:99:0,527,7308	0/0:157,0:157:99:0,473,6556	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:61,0:61:99:0,184,2547	1/1:0,141:141:99:5888,424,0
gi|293339394|gb|GU595196.1|	106041	.	C	T	458.79	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.327;DP=2871;Dels=0.00;FS=1.069;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9936;MQ=254.00;MQ0=0;MQRankSum=0.335;QD=35.29;ReadPosRankSum=-5.442;SB=-202.02	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:79,0:79:99:0,238,3299	1/1:0,6:6:18.06:251,18,0	0/0:92,0:92:99:0,277,3842	0/0:103,0:103:99:0,310,4301	0/0:179,0:179:99:0,539,7475	1/1:0,7:7:21.07:292,21,0	0/0:199,0:199:99:0,599,8310	0/0:158,0:158:99:0,476,6598	0/0:174,0:174:99:0,524,7266	0/0:179,0:179:99:0,539,7475	0/0:165,0:165:99:0,497,6890	0/0:183,0:183:99:0,551,7642	0/0:151,0:151:99:0,455,6306	0/0:184,0:184:99:0,554,7684	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:56,0:56:99:0,169,2339	0/0:128,0:128:99:0,385,5345
gi|293339394|gb|GU595196.1|	106053	.	A	G	5637.66	.	AC=4;AF=0.105;AN=38;BaseQRankSum=-0.546;DP=2813;Dels=0.00;FS=83.176;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.068;QD=41.76;ReadPosRankSum=-2.101;SB=-1252.83	GT:AD:DP:GQ:PL	0/0:147,0:147:99:0,442,6139	0/0:162,0:162:99:0,488,6765	1/1:0,73:73:99:3049,220,0	./.	0/0:97,0:97:99:0,292,4051	0/0:105,0:105:99:0,316,4385	0/0:168,0:168:99:0,506,7016	./.	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:181,0:181:99:0,545,7559	0/0:152,0:152:99:0,458,6348	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	1/1:0,62:62:99:2589,187,0	0/0:125,0:125:99:0,376,5220
gi|293339394|gb|GU595196.1|	106086	.	T	C	9730.18	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.992;DP=2885;Dels=0.00;FS=39.091;HRun=0;HaplotypeScore=4.7137;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.173;QD=41.76;ReadPosRankSum=0.519;SB=-3466.13	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	0/0:82,0:82:99:0,247,3424	1/1:0,54:54:99:2255,163,0	0/0:79,0:79:99:0,238,3299	0/0:104,0:104:99:0,313,4343	0/0:155,0:155:99:0,467,6473	1/1:0,45:45:99:1879,135,0	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:158,0:158:99:0,476,6598	0/0:133,0:133:99:0,400,5554	0/0:168,0:168:99:0,506,7016	0/0:184,0:184:99:0,554,7684	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	0/0:71,0:71:99:0,214,2965	1/1:0,134:134:99:5596,403,0
gi|293339394|gb|GU595196.1|	106089	.	G	A	4718.94	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.106;DP=2883;Dels=0.00;FS=9.033;HRun=2;HaplotypeScore=5.3802;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.306;QD=41.76;ReadPosRankSum=1.006;SB=-1920.99	GT:AD:DP:GQ:PL	0/0:196,0:196:99:0,590,8185	0/0:164,0:164:99:0,494,6849	0/0:82,0:82:99:0,247,3424	1/1:0,64:64:99:2673,193,0	0/0:75,0:75:99:0,226,3132	0/0:102,0:102:99:0,307,4260	0/0:153,0:153:99:0,461,6389	1/1:0,49:49:99:2046,147,0	0/0:162,0:162:99:0,488,6765	0/0:172,0:172:99:0,518,7183	0/0:155,0:155:99:0,467,6473	0/0:133,0:133:99:0,400,5554	0/0:173,0:173:99:0,521,7225	0/0:183,0:183:99:0,551,7642	0/0:160,0:160:99:0,482,6682	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:69,0:69:99:0,208,2881	0/0:131,0:131:99:0,394,5471
gi|293339394|gb|GU595196.1|	106119	.	C	T	5721.18	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.034;DP=3053;Dels=0.00;FS=1.790;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.244;QD=41.76;ReadPosRankSum=-0.235;SB=-2714.44	GT:AD:DP:GQ:PL	0/0:206,0:206:99:0,620,8603	0/0:150,0:150:99:0,452,6264	1/1:0,84:84:99:3508,253,0	0/0:133,0:133:99:0,400,5554	0/0:63,0:63:99:0,190,2631	0/0:109,0:109:99:0,328,4552	0/0:178,0:178:99:0,536,7433	0/0:81,0:81:99:0,244,3383	0/0:151,0:151:99:0,455,6306	0/0:184,0:184:99:0,554,7684	0/0:171,0:171:99:0,515,7141	0/0:165,0:165:99:0,497,6890	0/0:179,0:179:99:0,539,7475	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:186,0:186:99:0,560,7767	0/0:182,0:182:99:0,548,7600	0/0:155,0:155:99:0,467,6473	0/0:150,0:150:99:0,452,6264	1/1:0,53:53:99:2213,160,0	0/0:134,0:134:99:0,403,5596
gi|293339394|gb|GU595196.1|	106122	.	C	T	5512.38	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.498;DP=3041;Dels=0.00;FS=1.022;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.335;QD=41.76;ReadPosRankSum=0.569;SB=-2714.44	GT:AD:DP:GQ:PL	0/0:205,0:205:99:0,617,8561	0/0:153,0:153:99:0,461,6389	1/1:0,81:81:99:3383,244,0	0/0:136,0:136:99:0,409,5679	0/0:63,0:63:99:0,190,2631	0/0:111,0:111:99:0,334,4635	0/0:176,0:176:99:0,530,7350	0/0:77,0:77:99:0,232,3216	0/0:151,0:151:99:0,455,6306	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:185,0:185:99:0,557,7726	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:186,0:186:99:0,560,7767	0/0:175,0:175:99:0,527,7308	0/0:153,0:153:99:0,461,6389	0/0:148,0:148:99:0,445,6181	1/1:0,51:51:99:2130,154,0	0/0:138,0:138:99:0,415,5763
gi|293339394|gb|GU595196.1|	106182	.	G	C	6138.79	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.049;DP=2987;Dels=0.00;FS=105.845;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.105;QD=41.76;ReadPosRankSum=0.220;SB=-1294.59	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:158,0:158:99:0,476,6598	0/0:68,0:68:99:0,205,2840	0/0:153,0:153:99:0,461,6389	1/1:0,81:81:99:3383,244,0	0/0:123,0:123:99:0,370,5137	0/0:177,0:177:99:0,533,7392	1/1:0,66:66:99:2756,199,0	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:189,0:189:99:0,569,7893	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	0/0:193,0:193:99:0,581,8060	0/0:140,0:140:99:0,421,5846	0/0:154,0:154:99:0,464,6431	0/0:167,0:167:99:0,503,6974	0/0:150,0:150:99:0,452,6264	0/0:190,0:190:99:0,572,7934	0/0:44,0:44:99:0,132,1837	0/0:120,0:120:99:0,361,5011
gi|293339394|gb|GU595196.1|	106215	.	T	G	5220.06	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.420;DP=2987;Dels=0.00;FS=95.496;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.680;QD=41.76;ReadPosRankSum=-0.796;SB=-960.51	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:183,0:183:99:0,551,7642	0/0:59,0:59:99:0,178,2464	0/0:135,0:135:99:0,406,5638	1/1:0,77:77:99:3216,232,0	0/0:125,0:125:99:0,376,5220	0/0:179,0:179:99:0,539,7475	1/1:0,48:48:99:2004,144,0	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:190,0:190:99:0,572,7934	0/0:159,0:159:99:0,479,6640	0/0:179,0:179:99:0,539,7475	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:152,0:152:99:0,458,6348	0/0:153,0:153:99:0,461,6389	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:42,0:42:99:0,126,1754	0/0:108,0:108:99:0,325,4510
gi|293339394|gb|GU595196.1|	106227	.	T	C	8727.93	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.473;DP=2943;Dels=0.00;FS=474.389;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.369;QD=41.76;ReadPosRankSum=-0.927;SB=-250.58	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	1/1:0,58:58:99:2422,175,0	0/0:140,0:140:99:0,421,5846	0/0:72,0:72:99:0,217,3007	0/0:113,0:113:99:0,340,4719	0/0:177,0:177:99:0,533,7392	0/0:46,0:46:99:0,138,1921	0/0:183,0:183:99:0,551,7642	0/0:164,0:164:99:0,494,6849	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	0/0:157,0:157:99:0,473,6556	0/0:141,0:141:99:0,424,5888	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	1/1:0,40:40:99:1670,120,0	1/1:0,111:111:99:4635,334,0
gi|293339394|gb|GU595196.1|	106230	.	C	T	8602.65	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.244;DP=2960;Dels=0.00;FS=484.418;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.275;QD=41.76;ReadPosRankSum=-0.373;SB=-208.82	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	1/1:0,58:58:99:2422,175,0	0/0:137,0:137:99:0,412,5721	0/0:73,0:73:99:0,220,3049	0/0:113,0:113:99:0,340,4719	0/0:176,0:176:99:0,530,7350	0/0:44,0:44:99:0,132,1837	0/0:194,0:194:99:0,584,8102	0/0:161,0:161:99:0,485,6723	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:149,0:149:99:0,448,6222	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	1/1:0,41:41:99:1712,123,0	1/1:0,107:107:99:4468,322,0
gi|293339394|gb|GU595196.1|	106245	.	G	A	4885.98	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.852;DP=2938;Dels=0.00;FS=26.303;HRun=0;HaplotypeScore=5.2374;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.855;QD=41.76;ReadPosRankSum=0.116;SB=-1586.91	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:58,0:58:99:0,175,2422	0/0:122,0:122:99:0,367,5095	1/1:0,81:81:99:3383,244,0	0/0:104,0:104:99:0,313,4343	0/0:177,0:177:99:0,533,7392	1/1:0,36:36:99:1503,108,0	0/0:183,0:183:99:0,551,7642	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:179,0:179:99:0,539,7475	0/0:159,0:159:99:0,479,6640	0/0:40,0:40:99:0,120,1670	0/0:121,0:121:99:0,364,5053
gi|293339394|gb|GU595196.1|	106248	.	G	A	4885.98	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.455;DP=2921;Dels=0.00;FS=42.038;HRun=0;HaplotypeScore=5.3326;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.651;QD=41.76;ReadPosRankSum=1.103;SB=-1710.59	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	0/0:56,0:56:99:0,169,2339	1/1:0,117:117:99:4886,352,0	0/0:82,0:82:99:0,247,3424	0/0:111,0:111:99:0,334,4635	0/0:172,0:172:99:0,518,7183	0/0:37,0:37:99:0,111,1545	0/0:182,0:182:99:0,548,7600	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	0/0:151,0:151:99:0,455,6306	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	0/0:37,0:37:99:0,111,1545	0/0:119,0:119:99:0,358,4969
gi|293339394|gb|GU595196.1|	106263	.	A	G	10356.58	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.569;DP=2905;Dels=0.00;FS=0.486;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.063;QD=41.76;ReadPosRankSum=-0.869;SB=-4718.94	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:151,0:151:99:0,455,6306	0/0:55,0:55:99:0,166,2297	1/1:0,122:122:99:5095,367,0	1/1:0,84:84:99:3508,253,0	0/0:106,0:106:99:0,319,4427	0/0:180,0:180:99:0,542,7517	1/1:0,42:42:99:1754,126,0	0/0:172,0:172:99:0,518,7183	0/0:161,0:161:99:0,485,6723	0/0:151,0:151:99:0,455,6306	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:147,0:147:99:0,442,6139	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:42,0:42:99:0,126,1754	0/0:118,0:118:99:0,355,4928
gi|293339394|gb|GU595196.1|	106281	.	G	A	8978.49	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.033;DP=2898;Dels=0.00;FS=613.128;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.491;QD=41.76;ReadPosRankSum=-0.448;SB=-0.02	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:143,0:143:99:0,430,5972	1/1:0,59:59:99:2464,178,0	0/0:97,0:97:99:0,292,4051	0/0:68,0:68:99:0,205,2840	0/0:110,0:110:99:0,331,4594	0/0:180,0:180:99:0,542,7517	0/0:34,0:34:99:0,102,1420	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:190,0:190:99:0,572,7934	0/0:169,0:169:99:0,509,7057	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	1/1:0,46:46:99:1921,138,0	1/1:0,110:110:99:4594,331,0
gi|293339394|gb|GU595196.1|	106297	.	G	A	2502.65	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.179;DP=2875;Dels=0.00;FS=29.291;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.203;QD=40.37;ReadPosRankSum=-2.774;SB=-668.18	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:152,0:152:99:0,458,6348	0/0:67,0:67:99:0,202,2798	0/0:94,0:94:99:0,283,3925	1/1:0,39:39:99:1629,117,0	0/0:117,0:117:99:0,352,4886	0/0:184,0:184:99:0,554,7684	1/1:0,23:23:69.23:960,69,0	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:187,0:187:99:0,563,7809	0/0:172,0:172:99:0,518,7183	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:47,0:47:99:0,141,1963	0/0:94,0:94:99:0,283,3925
gi|293339394|gb|GU595196.1|	106314	.	T	G	336.73	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.865;DP=2808;Dels=0.00;FS=1.186;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9830;MQ=254.00;MQ0=0;MQRankSum=0.643;QD=33.67;ReadPosRankSum=-4.250;SB=-157.74	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:64,0:64:99:0,193,2673	0/0:88,0:88:99:0,265,3675	1/1:0,5:5:15.05:209,15,0	0/0:102,0:102:99:0,307,4260	0/0:175,0:175:99:0,527,7308	1/1:0,5:5:15.05:209,15,0	0/0:177,0:177:99:0,533,7392	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:175,0:175:99:0,527,7308	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:175,0:175:99:0,527,7308	0/0:176,0:176:99:0,530,7350	0/0:185,0:185:99:0,557,7726	0/0:156,0:156:99:0,470,6515	0/0:150,0:150:99:0,452,6264	0/0:41,0:41:99:0,123,1712	0/0:97,0:97:99:0,292,4051
gi|293339394|gb|GU595196.1|	106338	.	T	C	73.68	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.392;DP=2698;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.3000;InbreedingCoeff=0.9382;MQ=254.00;MQ0=0;MQRankSum=-0.081;QD=24.56;ReadPosRankSum=-2.620;SB=-38.98	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	0/0:27,0:27:81.27:0,81,1128	0/0:81,0:81:99:0,244,3383	1/1:0,3:3:9.03:125,9,0	0/0:99,0:99:99:0,298,4134	0/0:179,0:179:99:0,539,7475	./.	0/0:171,0:171:99:0,515,7141	0/0:186,0:186:99:0,560,7767	0/0:163,0:163:99:0,491,6807	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	0/0:184,0:184:99:0,554,7684	0/0:194,0:194:99:0,584,8102	0/0:154,0:154:99:0,464,6431	0/0:149,0:149:99:0,448,6222	0/0:16,0:16:48.16:0,48,668	0/0:57,0:57:99:0,172,2380
gi|293339394|gb|GU595196.1|	106341	.	A	C,G	4301.33	.	AC=2,6;AF=0.050,0.150;AN=40;BaseQRankSum=-1.183;DP=2716;Dels=0.00;FS=261.727;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.005;QD=41.76;ReadPosRankSum=-5.159;SB=-77.52	GT:AD:DP:GQ:PL	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:186,0,0:186:99:0,560,7767,560,7767,7767	2/2:0,0,25:25:75.25:1044,1044,1044,75,75,0	0/0:91,0,0:91:99:0,274,3800,274,3800,3800	1/1:0,10,0:10:30.10:418,30,0,418,30,418	0/0:104,0,0:104:99:0,313,4343,313,4343,4343	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	./.	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	0/0:162,0,0:162:99:0,488,6765,488,6765,6765	0/0:185,0,0:185:99:0,557,7726,557,7726,7726	0/0:199,0,0:199:99:0,599,8310,599,8310,8310	0/0:151,0,0:151:99:0,455,6306,455,6306,6306	0/0:152,0,0:152:99:0,458,6348,458,6348,6348	2/2:0,0,14:14:42.14:585,585,585,42,42,0	2/2:0,0,54:54:99:2255,2255,2255,163,163,0
gi|293339394|gb|GU595196.1|	106353	.	G	T	3633.17	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.329;DP=2682;Dels=0.00;FS=136.094;HRun=0;HaplotypeScore=1.2998;InbreedingCoeff=0.9660;MQ=254.00;MQ0=0;MQRankSum=-0.651;QD=41.76;ReadPosRankSum=-2.334;SB=-375.86	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:189,0:189:99:0,569,7893	0/0:7,0:7:21.07:0,21,292	1/1:0,87:87:99:3633,262,0	0/0:29,0:29:87.29:0,87,1211	0/0:111,0:111:99:0,334,4635	0/0:178,0:178:99:0,536,7433	./.	0/0:181,0:181:99:0,545,7559	0/0:181,0:181:99:0,545,7559	0/0:185,0:185:99:0,557,7726	0/0:173,0:173:99:0,521,7225	0/0:180,0:180:99:0,542,7517	0/0:180,0:180:99:0,542,7517	0/0:159,0:159:99:0,479,6640	0/0:164,0:164:99:0,494,6849	0/0:177,0:177:99:0,533,7392	0/0:156,0:156:99:0,470,6515	0/0:164,0:164:99:0,494,6849	0/0:4,0:4:12.04:0,12,167	0/0:19,0:19:57.19:0,57,793
gi|293339394|gb|GU595196.1|	106354	.	C	T	985.40	.	AC=6;AF=0.150;AN=40;BaseQRankSum=0.828;DP=2679;Dels=0.00;FS=74.020;HRun=1;HaplotypeScore=1.2998;InbreedingCoeff=0.9868;MQ=254.00;MQ0=0;MQRankSum=2.535;QD=37.90;ReadPosRankSum=-5.999;SB=-0.02	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:184,0:184:99:0,554,7684	1/1:0,7:7:21.07:292,21,0	0/0:86,0:86:99:0,259,3591	0/0:30,0:30:90.30:0,90,1253	0/0:112,0:112:99:0,337,4677	0/0:177,0:177:99:0,533,7392	./.	0/0:179,0:179:99:0,539,7475	0/0:177,0:177:99:0,533,7392	0/0:184,0:184:99:0,554,7684	0/0:172,0:172:99:0,518,7183	0/0:181,0:181:99:0,545,7559	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	0/0:168,0:168:99:0,506,7016	0/0:177,0:177:99:0,533,7392	0/0:158,0:158:99:0,476,6598	0/0:167,0:167:99:0,503,6974	1/1:0,4:4:12.04:167,12,0	1/1:0,15:15:45.15:626,45,0
gi|293339394|gb|GU595196.1|	106411	.	A	G	4760.70	.	AC=2;AF=0.059;AN=34;BaseQRankSum=0.110;DP=2603;Dels=0.00;FS=236.130;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=4.010;QD=41.76;ReadPosRankSum=-0.351;SB=-292.34	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	./.	1/1:0,114:114:99:4761,343,0	0/0:67,0:67:99:0,202,2798	0/0:126,0:126:99:0,379,5262	0/0:169,0:169:99:0,509,7057	./.	0/0:148,0:148:99:0,445,6181	0/0:151,0:151:99:0,455,6306	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:183,0:183:99:0,551,7642	0/0:159,0:159:99:0,479,6640	0/0:163,0:163:99:0,491,6807	0/0:143,0:143:99:0,430,5972	0/0:174,0:174:99:0,524,7266	./.	./.
gi|293339394|gb|GU595196.1|	106450	.	A	G	5011.26	.	AC=2;AF=0.059;AN=34;BaseQRankSum=1.115;DP=2680;Dels=0.00;FS=69.487;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.260;QD=41.76;ReadPosRankSum=-0.131;SB=-1294.59	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:189,0:189:99:0,569,7893	./.	1/1:0,120:120:99:5011,361,0	0/0:86,0:86:99:0,259,3591	0/0:112,0:112:99:0,337,4677	0/0:177,0:177:99:0,533,7392	./.	0/0:153,0:153:99:0,461,6389	0/0:159,0:159:99:0,479,6640	0/0:155,0:155:99:0,467,6473	0/0:164,0:164:99:0,494,6849	0/0:155,0:155:99:0,467,6473	0/0:162,0:162:99:0,488,6765	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:182,0:182:99:0,548,7600	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	./.	./.
gi|293339394|gb|GU595196.1|	106490	.	T	A	3340.85	.	AC=2;AF=0.059;AN=34;BaseQRankSum=0.421;DP=2723;Dels=0.00;FS=8.539;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.113;QD=41.76;ReadPosRankSum=2.759;SB=-1336.35	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	./.	1/1:0,80:80:99:3341,241,0	0/0:69,0:69:99:0,208,2881	0/0:110,0:110:99:0,331,4594	0/0:201,0:201:99:0,605,8394	./.	0/0:183,0:183:99:0,551,7642	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:186,0:186:99:0,560,7767	0/0:146,0:146:99:0,439,6097	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:188,0:188:99:0,566,7851	0/0:186,0:186:99:0,560,7767	0/0:179,0:179:99:0,539,7475	./.	./.
gi|293339394|gb|GU595196.1|	106501	.	A	T	2319.86	.	AC=2;AF=0.059;AN=34;BaseQRankSum=0.644;DP=2728;Dels=0.00;FS=10.880;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.983;QD=40.70;ReadPosRankSum=-4.420;SB=-876.99	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:166,0:166:99:0,500,6932	./.	1/1:0,57:57:99:2380,172,0	0/0:64,0:64:99:0,193,2673	0/0:117,0:117:99:0,352,4886	0/0:197,0:197:99:0,593,8227	./.	0/0:203,0:203:99:0,611,8477	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:188,0:188:99:0,566,7851	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:184,0:184:99:0,554,7684	0/0:194,0:194:99:0,584,8102	0/0:178,0:178:99:0,536,7433	0/0:172,0:172:99:0,518,7183	./.	./.
gi|293339394|gb|GU595196.1|	106575	.	T	G	273.74	.	AC=2;AF=0.053;AN=38;BaseQRankSum=0.169;DP=2598;Dels=0.00;FS=21.107;HRun=0;HaplotypeScore=0.4210;InbreedingCoeff=0.9821;MQ=254.00;MQ0=0;MQRankSum=0.492;QD=34.22;ReadPosRankSum=-0.187;SB=-0.02	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:183,0:183:99:0,551,7642	0/0:14,0:14:42.14:0,42,585	./.	0/0:62,0:62:99:0,187,2589	0/0:134,0:134:99:0,403,5596	0/0:175,0:175:99:0,527,7308	1/1:0,8:8:24.08:334,24,0	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:152,0:152:99:0,458,6348	0/0:157,0:157:99:0,473,6556	0/0:154,0:154:99:0,464,6431	0/0:189,0:189:99:0,569,7893	0/0:192,0:192:99:0,578,8018	0/0:176,0:176:99:0,530,7350	0/0:179,0:179:99:0,539,7475	0/0:158,0:158:99:0,476,6598	0/0:155,0:155:99:0,467,6473	0/0:5,0:5:15.05:0,15,209	./.
gi|293339394|gb|GU595196.1|	106576	.	C	T	752.91	.	AC=4;AF=0.105;AN=38;BaseQRankSum=0.592;DP=2584;Dels=0.00;FS=57.420;HRun=1;HaplotypeScore=0.4210;InbreedingCoeff=0.9904;MQ=254.00;MQ0=0;MQRankSum=0.571;QD=37.65;ReadPosRankSum=-4.359;SB=-0.02	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:185,0:185:99:0,557,7726	1/1:0,15:15:45.15:626,45,0	./.	0/0:63,0:63:99:0,190,2631	0/0:128,0:128:99:0,385,5345	0/0:174,0:174:99:0,524,7266	0/0:8,0:8:24.08:0,24,334	0/0:171,0:171:99:0,515,7141	0/0:163,0:163:99:0,491,6807	0/0:149,0:149:99:0,448,6222	0/0:157,0:157:99:0,473,6556	0/0:155,0:155:99:0,467,6473	0/0:189,0:189:99:0,569,7893	0/0:191,0:191:99:0,575,7976	0/0:173,0:173:99:0,521,7225	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:156,0:156:99:0,470,6515	1/1:0,5:5:15.05:209,15,0	./.
gi|293339394|gb|GU595196.1|	106589	.	G	T	1902.54	.	AC=6;AF=0.158;AN=38;BaseQRankSum=1.554;DP=2610;Dels=0.00;FS=141.017;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9992;MQ=254.00;MQ0=0;MQRankSum=0.951;QD=39.64;ReadPosRankSum=0.454;SB=-0.02	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:179,0:179:99:0,539,7475	1/1:0,23:23:69.23:960,69,0	./.	0/0:81,0:81:99:0,244,3383	0/0:118,0:118:99:0,355,4928	0/0:175,0:175:99:0,527,7308	1/1:0,17:17:51.17:710,51,0	0/0:155,0:155:99:0,467,6473	0/0:166,0:166:99:0,500,6932	0/0:155,0:155:99:0,467,6473	0/0:166,0:166:99:0,500,6932	0/0:161,0:161:99:0,485,6723	0/0:188,0:188:99:0,566,7851	0/0:193,0:193:99:0,581,8060	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:146,0:146:99:0,439,6097	1/1:0,8:8:24.08:334,24,0	./.
gi|293339394|gb|GU595196.1|	106625	.	C	T	439.74	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-0.097;DP=2663;Dels=0.00;FS=32.997;HRun=0;HaplotypeScore=0.6315;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.128;QD=36.65;ReadPosRankSum=2.091;SB=-0.02	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:178,0:178:99:0,536,7433	0/0:30,0:30:90.30:0,90,1253	./.	0/0:93,0:93:99:0,280,3884	0/0:111,0:111:99:0,334,4635	0/0:189,0:189:99:0,569,7893	0/0:26,0:26:78.26:0,78,1086	0/0:143,0:143:99:0,430,5972	0/0:154,0:154:99:0,464,6431	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:184,0:184:99:0,554,7684	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	0/0:190,0:190:99:0,572,7934	0/0:171,0:171:99:0,515,7141	1/1:0,12:12:36.12:501,36,0	./.
gi|293339394|gb|GU595196.1|	106633	.	A	G	2278.28	.	AC=6;AF=0.158;AN=38;BaseQRankSum=-0.123;DP=2624;Dels=0.00;FS=162.367;HRun=0;HaplotypeScore=0.4736;InbreedingCoeff=0.9996;MQ=254.00;MQ0=0;MQRankSum=-1.116;QD=39.97;ReadPosRankSum=0.886;SB=-0.02	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	1/1:0,25:25:75.25:1044,75,0	./.	0/0:89,0:89:99:0,268,3717	0/0:119,0:119:99:0,358,4969	0/0:184,0:184:99:0,554,7684	1/1:0,23:23:69.23:960,69,0	0/0:148,0:148:99:0,445,6181	0/0:160,0:160:99:0,482,6682	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/0:148,0:148:99:0,445,6181	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:181,0:181:99:0,545,7559	0/0:177,0:177:99:0,533,7392	1/1:0,9:9:27.09:376,27,0	./.
gi|293339394|gb|GU595196.1|	106650	.	A	G	112.85	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-1.176;DP=2648;Dels=0.00;FS=9.040;HRun=0;HaplotypeScore=0.2000;InbreedingCoeff=0.9122;MQ=254.00;MQ0=0;MQRankSum=-0.527;QD=28.21;ReadPosRankSum=-2.718;SB=-0.02	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:179,0:179:99:0,539,7475	0/0:16,0:16:48.16:0,48,668	./.	0/0:81,0:81:99:0,244,3383	0/0:115,0:115:99:0,346,4802	0/0:182,0:182:99:0,548,7600	1/1:0,4:4:12.04:167,12,0	0/0:156,0:156:99:0,470,6515	0/0:178,0:178:99:0,536,7433	0/0:177,0:177:99:0,533,7392	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:183,0:183:99:0,551,7642	0/0:157,0:157:99:0,473,6556	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	0/0:179,0:179:99:0,539,7475	0/0:179,0:179:99:0,539,7475	0/0:3,0:3:9.03:0,9,125	0/0:10,0:10:30.10:0,30,418
gi|293339394|gb|GU595196.1|	106657	.	G	T	356.50	.	AC=2;AF=0.053;AN=38;BaseQRankSum=-1.429;DP=2674;Dels=0.00;FS=30.176;HRun=1;HaplotypeScore=0.5262;InbreedingCoeff=0.9433;MQ=254.00;MQ0=0;MQRankSum=-1.919;QD=35.65;ReadPosRankSum=-2.647;SB=0.38	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:178,0:178:99:0,536,7433	1/1:0,10:10:30.10:418,30,0	0/0:3,0:3:9.03:0,9,125	0/0:81,0:81:99:0,244,3383	0/0:117,0:117:99:0,352,4886	0/0:184,0:184:99:0,554,7684	./.	0/0:163,0:163:99:0,491,6807	0/0:178,0:178:99:0,536,7433	0/0:183,0:183:99:0,551,7642	0/0:184,0:184:99:0,554,7684	0/0:173,0:173:99:0,521,7225	0/0:186,0:186:99:0,560,7767	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:177,0:177:99:0,533,7392	./.	0/0:10,0:10:30.10:0,30,418
gi|293339394|gb|GU595196.1|	106663	.	G	A	464.29	.	AC=4;AF=0.105;AN=38;BaseQRankSum=0.965;DP=2621;Dels=0.00;FS=12.716;HRun=0;HaplotypeScore=0.2631;InbreedingCoeff=0.9595;MQ=254.00;MQ0=0;MQRankSum=0.197;QD=35.71;ReadPosRankSum=2.024;SB=-107.39	GT:AD:DP:GQ:PL	0/0:147,0:147:99:0,442,6139	0/0:163,0:163:99:0,491,6807	0/0:5,0:5:15.05:0,15,209	1/1:0,3:3:9.03:125,9,0	0/0:88,0:88:99:0,265,3675	0/0:121,0:121:99:0,364,5053	0/0:182,0:182:99:0,548,7600	./.	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	0/0:161,0:161:99:0,485,6723	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:186,0:186:99:0,560,7767	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:178,0:178:99:0,536,7433	./.	1/1:0,10:10:30.10:418,30,0
gi|293339394|gb|GU595196.1|	106671	.	G	T	465.05	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.091;DP=2665;Dels=0.00;FS=10.385;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9677;MQ=254.00;MQ0=0;MQRankSum=-0.522;QD=35.77;ReadPosRankSum=4.538;SB=-107.68	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:169,0:169:99:0,509,7057	./.	1/1:0,3:3:9.03:125,9,0	0/0:95,0:95:99:0,286,3967	0/0:123,0:123:99:0,370,5137	0/0:178,0:178:99:0,536,7433	./.	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:182,0:182:99:0,548,7600	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:177,0:177:99:0,533,7392	0/0:190,0:190:99:0,572,7934	./.	1/1:0,10:10:30.10:418,30,0
gi|293339394|gb|GU595196.1|	106690	.	G	C	258.97	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.088;DP=2706;Dels=0.00;FS=21.117;HRun=0;HaplotypeScore=0.3999;InbreedingCoeff=0.9371;MQ=254.00;MQ0=0;MQRankSum=0.494;QD=32.37;ReadPosRankSum=0.149;SB=0.29	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	1/1:0,2:2:6.02:84,6,0	0/0:24,0:24:72.24:0,72,1002	0/0:101,0:101:99:0,304,4218	0/0:118,0:118:99:0,355,4928	0/0:186,0:186:99:0,560,7767	./.	0/0:168,0:168:99:0,506,7016	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:184,0:184:99:0,554,7684	0/0:150,0:150:99:0,452,6264	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:180,0:180:99:0,542,7517	0/0:156,0:156:99:0,470,6515	0/0:194,0:194:99:0,584,8102	1/1:0,6:6:18.06:251,18,0	0/0:52,0:52:99:0,157,2172
gi|293339394|gb|GU595196.1|	106698	.	A	G	2652.57	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.307;DP=2716;Dels=0.00;FS=195.572;HRun=0;HaplotypeScore=1.6498;InbreedingCoeff=0.9440;MQ=254.00;MQ0=0;MQRankSum=-1.094;QD=40.81;ReadPosRankSum=1.692;SB=0.26	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:191,0:191:99:0,575,7976	0/0:3,0:3:9.03:0,9,125	0/0:28,0:28:84.28:0,84,1169	0/0:95,0:95:99:0,286,3967	0/0:109,0:109:99:0,328,4552	0/0:184,0:184:99:0,554,7684	./.	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:147,0:147:99:0,442,6139	0/0:176,0:176:99:0,530,7350	0/0:164,0:164:99:0,494,6849	0/0:175,0:175:99:0,527,7308	0/0:164,0:164:99:0,494,6849	0/0:197,0:197:99:0,593,8227	0/0:10,0:10:30.10:0,30,418	1/1:0,65:65:99:2714,196,0
gi|293339394|gb|GU595196.1|	106704	.	G	A	1274.48	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.012;DP=2738;Dels=0.00;FS=83.728;HRun=0;HaplotypeScore=3.1996;InbreedingCoeff=0.9444;MQ=254.00;MQ0=0;MQRankSum=0.965;QD=39.83;ReadPosRankSum=2.526;SB=-41.09	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:190,0:190:99:0,572,7934	0/0:3,0:3:9.03:0,9,125	1/1:0,32:32:96.32:1336,96,0	0/0:90,0:90:99:0,271,3758	0/0:107,0:107:99:0,322,4468	0/0:176,0:176:99:0,530,7350	./.	0/0:173,0:173:99:0,521,7225	0/0:150,0:150:99:0,452,6264	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:146,0:146:99:0,439,6097	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	0/0:182,0:182:99:0,548,7600	0/0:167,0:167:99:0,503,6974	0/0:197,0:197:99:0,593,8227	0/0:15,0:15:45.15:0,45,626	0/0:79,0:79:99:0,238,3299
gi|293339394|gb|GU595196.1|	106713	.	A	C,T	5428.86	.	AC=2,2;AF=0.050,0.050;AN=40;BaseQRankSum=-0.928;DP=2776;Dels=0.00;FS=262.875;HaplotypeScore=0.0000;InbreedingCoeff=0.9523;MQ=254.00;MQ0=0;MQRankSum=1.048;QD=41.76;ReadPosRankSum=3.284;SB=-1546.67	GT:AD:DP:GQ:PL	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:195,0,0:195:99:0,587,8143,587,8143,8143	0/0:3,0,0:3:9.03:0,9,125,9,125,125	1/1:0,39,0:39:99:1629,117,0,1629,117,1629	0/0:90,0,0:90:99:0,271,3758,271,3758,3758	0/0:113,0,0:113:99:0,340,4719,340,4719,4719	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	./.	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	0/0:179,0,0:179:99:0,539,7475,539,7475,7475	0/0:157,0,0:157:99:0,473,6556,473,6556,6556	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	0/0:142,0,0:142:99:0,427,5930,427,5930,5930	0/0:193,0,0:193:99:0,581,8060,581,8060,8060	0/0:161,0,0:161:99:0,485,6723,485,6723,6723	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	0/0:201,0,0:201:99:0,605,8394,605,8394,8394	0/0:18,0,0:18:54.18:0,54,752,54,752,752	2/2:0,0,91:91:99:3800,3800,3800,274,274,0
gi|293339394|gb|GU595196.1|	106761	.	C	T	4176.05	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.296;DP=2689;Dels=0.00;FS=122.834;HRun=0;HaplotypeScore=0.6999;InbreedingCoeff=0.9989;MQ=254.00;MQ0=0;MQRankSum=0.407;QD=41.76;ReadPosRankSum=-0.007;SB=-614.42	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:174,0:174:99:0,524,7266	0/0:16,0:16:48.16:0,48,668	1/1:0,16:16:48.16:668,48,0	0/0:87,0:87:99:0,262,3633	0/0:112,0:112:99:0,337,4677	0/0:169,0:169:99:0,509,7057	./.	0/0:189,0:189:99:0,569,7893	0/0:175,0:175:99:0,527,7308	0/0:149,0:149:99:0,448,6222	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	0/0:175,0:175:99:0,527,7308	0/0:162,0:162:99:0,488,6765	0/0:179,0:179:99:0,539,7475	0/0:156,0:156:99:0,470,6515	0/0:153,0:153:99:0,461,6389	0/0:8,0:8:24.08:0,24,334	1/1:0,84:84:99:3508,253,0
gi|293339394|gb|GU595196.1|	106767	.	C	T	522.77	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.739;DP=2628;Dels=0.00;FS=31.194;HRun=1;HaplotypeScore=0.6999;InbreedingCoeff=0.9842;MQ=254.00;MQ0=0;MQRankSum=0.474;QD=37.34;ReadPosRankSum=-0.505;SB=-41.29	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:154,0:154:99:0,464,6431	0/0:19,0:19:57.19:0,57,793	1/1:0,14:14:42.14:585,42,0	0/0:86,0:86:99:0,259,3591	0/0:104,0:104:99:0,313,4343	0/0:165,0:165:99:0,497,6890	./.	0/0:182,0:182:99:0,548,7600	0/0:178,0:178:99:0,536,7433	0/0:147,0:147:99:0,442,6139	0/0:162,0:162:99:0,488,6765	0/0:144,0:144:99:0,433,6013	0/0:182,0:182:99:0,548,7600	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:183,0:183:99:0,551,7642	0/0:156,0:156:99:0,470,6515	0/0:156,0:156:99:0,470,6515	0/0:5,0:5:15.05:0,15,209	0/0:81,0:81:99:0,244,3383
gi|293339394|gb|GU595196.1|	106800	.	A	T	232.66	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.404;DP=2736;Dels=0.00;FS=3.403;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8443;MQ=254.00;MQ0=0;MQRankSum=0.975;QD=33.24;ReadPosRankSum=-3.489;SB=-79.82	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:175,0:175:99:0,527,7308	0/0:27,0:27:81.27:0,81,1128	./.	0/0:82,0:82:99:0,247,3424	0/0:108,0:108:99:0,325,4510	0/0:174,0:174:99:0,524,7266	1/1:0,7:7:21.07:292,21,0	0/0:156,0:156:99:0,470,6515	0/0:172,0:172:99:0,518,7183	0/0:144,0:144:99:0,433,6013	0/0:181,0:181:99:0,545,7559	0/0:164,0:164:99:0,494,6849	0/0:198,0:198:99:0,596,8269	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:189,0:189:99:0,569,7893	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:1,0:1:3.01:0,3,42	0/0:114,0:114:99:0,343,4761
gi|293339394|gb|GU595196.1|	106812	.	A	G	1441.68	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.182;DP=2699;Dels=0.00;FS=6.175;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8483;MQ=254.00;MQ0=0;MQRankSum=-1.292;QD=40.05;ReadPosRankSum=-4.630;SB=-583.96	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:176,0:176:99:0,530,7350	0/0:25,0:25:75.25:0,75,1044	./.	0/0:80,0:80:99:0,241,3341	0/0:104,0:104:99:0,313,4343	0/0:171,0:171:99:0,515,7141	1/1:0,36:36:99:1503,108,0	0/0:154,0:154:99:0,464,6431	0/0:163,0:163:99:0,491,6807	0/0:144,0:144:99:0,433,6013	0/0:158,0:158:99:0,476,6598	0/0:168,0:168:99:0,506,7016	0/0:188,0:188:99:0,566,7851	0/0:164,0:164:99:0,494,6849	0/0:151,0:151:99:0,455,6306	0/0:179,0:179:99:0,539,7475	0/0:165,0:165:99:0,497,6890	0/0:183,0:183:99:0,551,7642	0/0:1,0:1:3.01:0,3,42	0/0:114,0:114:99:0,343,4761
gi|293339394|gb|GU595196.1|	106836	.	A	G	4760.70	.	AC=6;AF=0.150;AN=40;BaseQRankSum=0.662;DP=2735;Dels=0.00;FS=63.822;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9992;MQ=254.00;MQ0=0;MQRankSum=-0.799;QD=41.76;ReadPosRankSum=2.645;SB=-1168.70	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:178,0:178:99:0,536,7433	1/1:0,12:12:36.12:501,36,0	./.	0/0:96,0:96:99:0,289,4009	0/0:96,0:96:99:0,289,4009	0/0:185,0:185:99:0,557,7726	0/0:85,0:85:99:0,256,3550	0/0:148,0:148:99:0,445,6181	0/0:181,0:181:99:0,545,7559	0/0:147,0:147:99:0,442,6139	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:181,0:181:99:0,545,7559	0/0:157,0:157:99:0,473,6556	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	1/1:0,8:8:24.08:334,24,0	1/1:0,94:94:99:3925,283,0
gi|293339394|gb|GU595196.1|	106839	.	G	A	4844.22	.	AC=6;AF=0.150;AN=40;BaseQRankSum=0.753;DP=2766;Dels=0.00;FS=52.093;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9996;MQ=254.00;MQ0=0;MQRankSum=0.902;QD=41.76;ReadPosRankSum=1.733;SB=-1293.86	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	1/1:0,12:12:36.12:501,36,0	./.	0/0:97,0:97:99:0,292,4051	0/0:95,0:95:99:0,286,3967	0/0:183,0:183:99:0,551,7642	0/0:97,0:97:99:0,292,4051	0/0:157,0:157:99:0,473,6556	0/0:175,0:175:99:0,527,7308	0/0:155,0:155:99:0,467,6473	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	0/0:187,0:187:99:0,563,7809	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	0/0:178,0:178:99:0,536,7433	1/1:0,9:9:27.09:376,27,0	1/1:0,95:95:99:3967,286,0
gi|293339394|gb|GU595196.1|	106863	.	C	G,T	107.86	.	AC=2,2;AF=0.048,0.048;AN=42;BaseQRankSum=-0.198;DP=2828;Dels=0.00;FS=9.717;HaplotypeScore=0.0952;InbreedingCoeff=0.9418;MQ=254.00;MQ0=0;MQRankSum=0.943;QD=21.57;ReadPosRankSum=3.152;SB=-0.02	GT:AD:DP:GQ:PL	0/0:149,0,0:149:99:0,448,6222,448,6222,6222	0/0:164,0,0:164:99:0,494,6849,494,6849,6849	2/2:0,0,3:3:9.03:125,125,125,9,9,0	1/1:0,2,0:2:6.02:84,6,0,84,6,84	0/0:116,0,0:116:99:0,349,4844,349,4844,4844	0/0:120,0,0:120:99:0,361,5011,361,5011,5011	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:102,0,0:102:99:0,307,4260,307,4260,4260	0/0:152,0,0:152:99:0,458,6348,458,6348,6348	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:187,0,0:187:99:0,563,7809,563,7809,7809	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	0/0:150,0,0:150:99:0,452,6264,452,6264,6264	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:180,0,0:180:99:0,542,7517,542,7517,7517	0/0:24,0,0:24:72.24:0,72,1002,72,1002,1002	0/0:114,0,0:114:99:0,343,4761,343,4761,4761
gi|293339394|gb|GU595196.1|	106872	.	A	G	5053.02	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.146;DP=2827;Dels=0.00;FS=60.243;HRun=0;HaplotypeScore=5.4278;InbreedingCoeff=0.9505;MQ=254.00;MQ0=0;MQRankSum=0.282;QD=41.76;ReadPosRankSum=0.691;SB=-1328.66	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:160,0:160:99:0,482,6682	1/1:0,3:3:9.03:125,9,0	1/1:0,2:2:6.02:84,6,0	0/0:115,0:115:99:0,346,4802	0/0:123,0:123:99:0,370,5137	0/0:174,0:174:99:0,524,7266	1/1:0,99:99:99:4134,298,0	0/0:145,0:145:99:0,436,6055	0/0:164,0:164:99:0,494,6849	0/0:186,0:186:99:0,560,7767	0/0:159,0:159:99:0,479,6640	0/0:169,0:169:99:0,509,7057	0/0:188,0:188:99:0,566,7851	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:148,0:148:99:0,445,6181	0/0:177,0:177:99:0,533,7392	0/0:183,0:183:99:0,551,7642	1/1:0,17:17:51.17:710,51,0	0/0:125,0:125:99:0,376,5220
gi|293339394|gb|GU595196.1|	106879	.	G	T	5178.30	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.083;DP=2823;Dels=0.00;FS=56.618;HRun=1;HaplotypeScore=4.9517;InbreedingCoeff=0.8575;MQ=254.00;MQ0=0;MQRankSum=0.488;QD=41.76;ReadPosRankSum=3.481;SB=-1460.44	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:156,0:156:99:0,470,6515	0/0:3,0:3:9.03:0,9,125	0/0:2,0:2:6.02:0,6,84	0/0:108,0:108:99:0,325,4510	0/0:131,0:131:99:0,394,5471	0/0:176,0:176:99:0,530,7350	0/0:90,0:90:99:0,271,3758	0/0:153,0:153:99:0,461,6389	0/0:158,0:158:99:0,476,6598	0/0:187,0:187:99:0,563,7809	0/0:162,0:162:99:0,488,6765	0/0:177,0:177:99:0,533,7392	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:152,0:152:99:0,458,6348	0/0:184,0:184:99:0,554,7684	0/0:183,0:183:99:0,551,7642	0/0:17,0:17:51.17:0,51,710	1/1:0,124:124:99:5178,373,0
gi|293339394|gb|GU595196.1|	106908	.	A	C	34.96	.	AC=2;AF=0.053;AN=38;BaseQRankSum=0.020;DP=2885;Dels=0.00;FS=6.165;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8834;MQ=254.00;MQ0=0;MQRankSum=-0.608;QD=17.48;ReadPosRankSum=-2.128;SB=-0.01	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	./.	./.	0/0:93,0:93:99:0,280,3884	0/0:108,0:108:99:0,325,4510	0/0:188,0:188:99:0,566,7851	0/0:83,0:83:99:0,250,3466	0/0:162,0:162:99:0,488,6765	0/0:180,0:180:99:0,542,7517	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:182,0:182:99:0,548,7600	0/0:185,0:185:99:0,557,7726	0/0:159,0:159:99:0,479,6640	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:169,0:169:99:0,509,7057	1/1:0,2:2:6.02:84,6,0	0/0:175,0:175:99:0,527,7308
gi|293339394|gb|GU595196.1|	106931	.	G	A	3967.25	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.273;DP=2899;Dels=0.00;FS=213.964;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.494;QD=41.76;ReadPosRankSum=0.721;SB=-167.06	GT:AD:DP:GQ:PL	0/0:190,0:190:99:0,572,7934	0/0:171,0:171:99:0,515,7141	./.	./.	0/0:92,0:92:99:0,277,3842	0/0:97,0:97:99:0,292,4051	0/0:171,0:171:99:0,515,7141	1/1:0,95:95:99:3967,286,0	0/0:176,0:176:99:0,530,7350	0/0:186,0:186:99:0,560,7767	0/0:175,0:175:99:0,527,7308	0/0:193,0:193:99:0,581,8060	0/0:169,0:169:99:0,509,7057	0/0:164,0:164:99:0,494,6849	0/0:206,0:206:99:0,620,8603	0/0:154,0:154:99:0,464,6431	0/0:178,0:178:99:0,536,7433	0/0:131,0:131:99:0,394,5471	0/0:165,0:165:99:0,497,6890	./.	0/0:186,0:186:99:0,560,7767
gi|293339394|gb|GU595196.1|	106979	.	C	T	398.52	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.322;DP=2813;Dels=0.00;FS=30.029;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=0.139;QD=36.23;ReadPosRankSum=-3.964;SB=-0.02	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	./.	./.	0/0:93,0:93:99:0,280,3884	0/0:106,0:106:99:0,319,4427	0/0:182,0:182:99:0,548,7600	1/1:0,11:11:33.11:459,33,0	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:177,0:177:99:0,533,7392	0/0:179,0:179:99:0,539,7475	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	0/0:192,0:192:99:0,578,8018	0/0:184,0:184:99:0,554,7684	0/0:170,0:170:99:0,512,7099	./.	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	106982	.	A	C	440.21	.	AC=2;AF=0.056;AN=36;BaseQRankSum=0.342;DP=2805;Dels=0.00;FS=33.034;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.974;QD=36.68;ReadPosRankSum=-5.174;SB=-0.02	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:182,0:182:99:0,548,7600	./.	./.	0/0:95,0:95:99:0,286,3967	0/0:107,0:107:99:0,322,4468	0/0:182,0:182:99:0,548,7600	1/1:0,12:12:36.12:501,36,0	0/0:169,0:169:99:0,509,7057	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:183,0:183:99:0,551,7642	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	0/0:188,0:188:99:0,566,7851	0/0:182,0:182:99:0,548,7600	0/0:161,0:161:99:0,485,6723	./.	0/0:186,0:186:99:0,560,7767
gi|293339394|gb|GU595196.1|	106988	.	C	T	732.46	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.633;DP=2815;Dels=0.00;FS=4.454;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.775;QD=38.55;ReadPosRankSum=-5.314;SB=-292.27	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:184,0:184:99:0,554,7684	./.	./.	0/0:97,0:97:99:0,292,4051	0/0:109,0:109:99:0,328,4552	0/0:178,0:178:99:0,536,7433	1/1:0,19:19:57.19:793,57,0	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:180,0:180:99:0,542,7517	0/0:182,0:182:99:0,548,7600	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:163,0:163:99:0,491,6807	./.	0/0:182,0:182:99:0,548,7600
gi|293339394|gb|GU595196.1|	107111	.	A	G	8519.13	.	AC=2;AF=0.056;AN=36;BaseQRankSum=-0.120;DP=2865;Dels=0.00;FS=3.306;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.314;QD=41.76;ReadPosRankSum=-0.392;SB=-3758.45	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	./.	./.	0/0:91,0:91:99:0,274,3800	0/0:96,0:96:99:0,289,4009	0/0:198,0:198:99:0,596,8269	0/0:141,0:141:99:0,424,5888	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:158,0:158:99:0,476,6598	0/0:143,0:143:99:0,430,5972	0/0:189,0:189:99:0,569,7893	0/0:166,0:166:99:0,500,6932	0/0:152,0:152:99:0,458,6348	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	./.	1/1:0,204:204:99:8519,614,0
gi|293339394|gb|GU595196.1|	107131	.	A	G	12235.80	.	AC=4;AF=0.111;AN=36;BaseQRankSum=0.799;DP=2921;Dels=0.00;FS=1.477;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.258;QD=41.76;ReadPosRankSum=0.472;SB=-5762.94	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:164,0:164:99:0,494,6849	./.	./.	0/0:97,0:97:99:0,292,4051	1/1:0,114:114:99:4761,343,0	1/1:0,179:179:99:7475,539,0	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	0/0:152,0:152:99:0,458,6348	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:141,0:141:99:0,424,5888	0/0:181,0:181:99:0,545,7559	0/0:187,0:187:99:0,563,7809	0/0:171,0:171:99:0,515,7141	./.	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	107279	.	G	T	11191.79	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-0.608;DP=2883;Dels=0.00;FS=3.551;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.949;QD=41.76;ReadPosRankSum=0.372;SB=-5470.62	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	./.	./.	0/0:92,0:92:99:0,277,3842	1/1:0,91:91:99:3800,274,0	1/1:0,177:177:99:7392,533,0	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:163,0:163:99:0,491,6807	0/0:165,0:165:99:0,497,6890	0/0:147,0:147:99:0,442,6139	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:154,0:154:99:0,464,6431	./.	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	107558	.	T	C	11358.83	.	AC=4;AF=0.111;AN=36;BaseQRankSum=-1.036;DP=2965;Dels=0.00;FS=12.491;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.490;QD=41.76;ReadPosRankSum=-0.220;SB=-5136.54	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:194,0:194:99:0,584,8102	./.	./.	0/0:89,0:89:99:0,268,3717	1/1:0,82:82:99:3424,247,0	1/1:0,190:190:99:7934,572,0	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:186,0:186:99:0,560,7767	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:177,0:177:99:0,533,7392	0/0:155,0:155:99:0,467,6473	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	./.	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	107606	.	G	C	9938.98	.	AC=4;AF=0.111;AN=36;BaseQRankSum=2.438;DP=2786;Dels=0.00;FS=0.241;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.730;QD=41.76;ReadPosRankSum=4.045;SB=-4927.74	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:164,0:164:99:0,494,6849	./.	./.	0/0:98,0:98:99:0,295,4093	1/1:0,103:103:99:4301,310,0	1/1:0,135:135:99:5638,406,0	0/0:151,0:151:99:0,455,6306	0/0:157,0:157:99:0,473,6556	0/0:197,0:197:99:0,593,8227	0/0:150,0:150:99:0,452,6264	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:141,0:141:99:0,424,5888	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	0/0:191,0:191:99:0,575,7976	0/0:160,0:160:99:0,482,6682	0/0:141,0:141:99:0,424,5888	./.	0/0:172,0:172:99:0,518,7183
gi|293339394|gb|GU595196.1|	107639	.	C	T	11191.79	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.918;DP=2838;Dels=0.00;FS=9.650;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9922;MQ=254.00;MQ0=0;MQRankSum=-0.676;QD=41.76;ReadPosRankSum=-0.524;SB=-5053.02	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:165,0:165:99:0,497,6890	1/1:0,4:4:12.04:167,12,0	1/1:0,15:15:45.15:626,45,0	0/0:93,0:93:99:0,280,3884	1/1:0,105:105:99:4385,316,0	1/1:0,130:130:99:5429,391,0	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:157,0:157:99:0,473,6556	0/0:156,0:156:99:0,470,6515	0/0:162,0:162:99:0,488,6765	1/1:0,14:14:42.14:585,42,0	0/0:204,0:204:99:0,614,8519
gi|293339394|gb|GU595196.1|	107645	.	G	A	12194.04	.	AC=10;AF=0.238;AN=42;BaseQRankSum=1.248;DP=2886;Dels=0.00;FS=23.513;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.864;QD=41.76;ReadPosRankSum=1.838;SB=-5094.78	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:161,0:161:99:0,485,6723	1/1:0,15:15:45.15:626,45,0	1/1:0,24:24:72.24:1002,72,0	0/0:92,0:92:99:0,277,3842	1/1:0,96:96:99:4009,289,0	1/1:0,136:136:99:5679,409,0	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	0/0:156,0:156:99:0,470,6515	0/0:168,0:168:99:0,506,7016	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	1/1:0,21:21:63.21:877,63,0	0/0:202,0:202:99:0,608,8436
gi|293339394|gb|GU595196.1|	107666	.	A	C	9521.37	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.835;DP=3054;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.374;QD=41.76;ReadPosRankSum=-0.438;SB=-4677.18	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:159,0:159:99:0,479,6640	0/0:39,0:39:99:0,117,1629	0/0:53,0:53:99:0,160,2213	0/0:94,0:94:99:0,283,3925	0/0:108,0:108:99:0,325,4510	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	0/0:141,0:141:99:0,424,5888	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:193,0:193:99:0,581,8060	0/0:170,0:170:99:0,512,7099	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:156,0:156:99:0,470,6515	0/0:183,0:183:99:0,551,7642	0/0:40,0:40:99:0,120,1670	1/1:0,228:228:99:9521,686,0
gi|293339394|gb|GU595196.1|	107705	.	A	C	8727.93	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.776;DP=3145;Dels=0.00;FS=1.112;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.294;QD=41.76;ReadPosRankSum=0.581;SB=-3925.49	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:72,0:72:99:0,217,3007	0/0:89,0:89:99:0,268,3717	0/0:96,0:96:99:0,289,4009	0/0:85,0:85:99:0,256,3550	0/0:186,0:186:99:0,560,7767	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:186,0:186:99:0,560,7767	0/0:154,0:154:99:0,464,6431	0/0:145,0:145:99:0,436,6055	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:197,0:197:99:0,593,8227	0/0:39,0:39:99:0,117,1629	1/1:0,209:209:99:8728,629,0
gi|293339394|gb|GU595196.1|	107790	.	G	A	3800.21	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.889;DP=3095;Dels=0.00;FS=140.317;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.397;QD=41.76;ReadPosRankSum=-1.015;SB=-375.86	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:159,0:159:99:0,479,6640	0/0:49,0:49:99:0,147,2046	1/1:0,91:91:99:3800,274,0	0/0:93,0:93:99:0,280,3884	0/0:93,0:93:99:0,280,3884	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:186,0:186:99:0,560,7767	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:186,0:186:99:0,560,7767	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:54,0:54:99:0,163,2255	0/0:198,0:198:99:0,596,8269
gi|293339394|gb|GU595196.1|	107909	.	G	A	10106.02	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.523;DP=3229;Dels=0.00;FS=26.799;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.235;QD=41.76;ReadPosRankSum=2.010;SB=-4050.77	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:169,0:169:99:0,509,7057	0/0:117,0:117:99:0,352,4886	0/0:162,0:162:99:0,488,6765	0/0:92,0:92:99:0,277,3842	1/1:0,91:91:99:3800,274,0	1/1:0,151:151:99:6306,455,0	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:134,0:134:99:0,403,5596	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:187,0:187:99:0,563,7809	0/0:189,0:189:99:0,569,7893	0/0:166,0:166:99:0,500,6932	0/0:179,0:179:99:0,539,7475	0/0:138,0:138:99:0,415,5763	0/0:184,0:184:99:0,554,7684	0/0:64,0:64:99:0,193,2673	0/0:179,0:179:99:0,539,7475
gi|293339394|gb|GU595196.1|	107967	.	A	G	35371.02	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.432;DP=3330;Dels=0.00;FS=21.170;HRun=0;HaplotypeScore=9.4273;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.706;QD=41.76;ReadPosRankSum=-1.523;SB=-15785.42	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	1/1:0,128:128:99:5345,385,0	1/1:0,163:163:99:6807,491,0	0/0:86,0:86:99:0,259,3591	1/1:0,100:100:99:4176,301,0	1/1:0,144:144:99:6013,433,0	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:159,0:159:99:0,479,6640	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	0/0:191,0:191:99:0,575,7976	0/0:183,0:183:99:0,551,7642	0/0:186,0:186:99:0,560,7767	0/0:177,0:177:99:0,533,7392	0/0:176,0:176:99:0,530,7350	0/0:158,0:158:99:0,476,6598	1/1:0,96:96:99:4009,289,0	1/1:0,216:216:99:9020,650,0
gi|293339394|gb|GU595196.1|	107975	.	G	T	10064.26	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.792;DP=3283;Dels=0.00;FS=12.834;HRun=0;HaplotypeScore=11.4747;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.857;QD=41.76;ReadPosRankSum=-1.227;SB=-4301.33	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:156,0:156:99:0,470,6515	0/0:134,0:134:99:0,403,5596	0/0:157,0:157:99:0,473,6556	0/0:94,0:94:99:0,283,3925	1/1:0,92:92:99:3842,277,0	1/1:0,149:149:99:6222,448,0	0/0:147,0:147:99:0,442,6139	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:155,0:155:99:0,467,6473	0/0:182,0:182:99:0,548,7600	0/0:154,0:154:99:0,464,6431	0/0:196,0:196:99:0,590,8185	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	0/0:184,0:184:99:0,554,7684	0/0:172,0:172:99:0,518,7183	0/0:156,0:156:99:0,470,6515	0/0:90,0:90:99:0,271,3758	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	107994	.	G	A	7433.36	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.645;DP=3240;Dels=0.00;FS=7.193;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.992;QD=41.76;ReadPosRankSum=0.779;SB=-3424.37	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:150,0:150:99:0,452,6264	0/0:128,0:128:99:0,385,5345	1/1:0,178:178:99:7433,536,0	0/0:100,0:100:99:0,301,4176	0/0:100,0:100:99:0,301,4176	0/0:161,0:161:99:0,485,6723	0/0:151,0:151:99:0,455,6306	0/0:169,0:169:99:0,509,7057	0/0:159,0:159:99:0,479,6640	0/0:151,0:151:99:0,455,6306	0/0:173,0:173:99:0,521,7225	0/0:152,0:152:99:0,458,6348	0/0:171,0:171:99:0,515,7141	0/0:187,0:187:99:0,563,7809	0/0:156,0:156:99:0,470,6515	0/0:157,0:157:99:0,473,6556	0/0:185,0:185:99:0,557,7726	0/0:170,0:170:99:0,512,7099	0/0:85,0:85:99:0,256,3550	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	108095	.	G	T	6305.83	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.500;DP=3223;Dels=0.00;FS=10.194;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.427;QD=41.76;ReadPosRankSum=1.164;SB=-2714.44	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:147,0:147:99:0,442,6139	0/0:175,0:175:99:0,527,7308	0/0:94,0:94:99:0,283,3925	0/0:70,0:70:99:0,211,2923	0/0:115,0:115:99:0,346,4802	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:180,0:180:99:0,542,7517	0/0:186,0:186:99:0,560,7767	0/0:152,0:152:99:0,458,6348	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:179,0:179:99:0,539,7475	0/0:187,0:187:99:0,563,7809	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:82,0:82:99:0,247,3424	1/1:0,151:151:99:6306,455,0
gi|293339394|gb|GU595196.1|	108107	.	G	A	4510.13	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.023;DP=3082;Dels=0.00;FS=2.042;HRun=0;HaplotypeScore=5.1422;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.089;QD=41.76;ReadPosRankSum=-4.703;SB=-2088.04	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:122,0:122:99:0,367,5095	0/0:158,0:158:99:0,476,6598	0/0:99,0:99:99:0,298,4134	1/1:0,42:42:99:1754,126,0	1/1:0,66:66:99:2756,199,0	0/0:171,0:171:99:0,515,7141	0/0:178,0:178:99:0,536,7433	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:175,0:175:99:0,527,7308	0/0:178,0:178:99:0,536,7433	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:197,0:197:99:0,593,8227	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:78,0:78:99:0,235,3257	0/0:85,0:85:99:0,256,3550
gi|293339394|gb|GU595196.1|	108116	.	T	G	17539.36	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.309;DP=2967;Dels=0.00;FS=0.582;HRun=0;HaplotypeScore=2.3330;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.989;QD=41.76;ReadPosRankSum=-1.623;SB=-8643.70	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	1/1:0,109:109:99:4552,328,0	1/1:0,140:140:99:5846,421,0	0/0:91,0:91:99:0,274,3800	1/1:0,15:15:45.15:626,45,0	1/1:0,34:34:99:1420,102,0	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:172,0:172:99:0,518,7183	0/0:184,0:184:99:0,554,7684	0/0:174,0:174:99:0,524,7266	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:210,0:210:99:0,632,8770	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	1/1:0,74:74:99:3090,223,0	1/1:0,48:48:99:2004,144,0
gi|293339394|gb|GU595196.1|	108128	.	A	C	19794.42	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.176;DP=3017;Dels=0.00;FS=2.098;HRun=1;HaplotypeScore=3.1901;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.870;QD=41.76;ReadPosRankSum=-8.598;SB=-9521.35	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	1/1:0,114:114:99:4761,343,0	1/1:0,145:145:99:6055,436,0	0/0:96,0:96:99:0,289,4009	1/1:0,26:26:78.26:1086,78,0	1/1:0,41:41:99:1712,123,0	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:188,0:188:99:0,566,7851	0/0:170,0:170:99:0,512,7099	0/0:185,0:185:99:0,557,7726	0/0:204,0:204:99:0,614,8519	0/0:199,0:199:99:0,599,8310	0/0:159,0:159:99:0,479,6640	1/1:0,82:82:99:3424,247,0	1/1:0,66:66:99:2756,199,0
gi|293339394|gb|GU595196.1|	108137	.	T	C	4718.94	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.192;DP=3118;Dels=0.00;FS=1.540;HRun=2;HaplotypeScore=10.2367;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.470;QD=41.76;ReadPosRankSum=-2.115;SB=-2338.60	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:155,0:155:99:0,467,6473	0/0:107,0:107:99:0,322,4468	0/0:149,0:149:99:0,448,6222	0/0:86,0:86:99:0,259,3591	1/1:0,43:43:99:1796,129,0	1/1:0,70:70:99:2923,211,0	0/0:183,0:183:99:0,551,7642	0/0:180,0:180:99:0,542,7517	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:181,0:181:99:0,545,7559	0/0:186,0:186:99:0,560,7767	0/0:160,0:160:99:0,482,6682	0/0:194,0:194:99:0,584,8102	0/0:187,0:187:99:0,563,7809	0/0:210,0:210:99:0,632,8770	0/0:180,0:180:99:0,542,7517	0/0:79,0:79:99:0,238,3299	0/0:102,0:102:99:0,307,4260
gi|293339394|gb|GU595196.1|	108145	.	C	T	5804.71	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.121;DP=3213;Dels=0.00;FS=2.197;HRun=1;HaplotypeScore=5.3802;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.803;QD=41.76;ReadPosRankSum=3.289;SB=-2672.68	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:158,0:158:99:0,476,6598	0/0:99,0:99:99:0,298,4134	0/0:156,0:156:99:0,470,6515	0/0:83,0:83:99:0,250,3466	0/0:65,0:65:99:0,196,2714	0/0:100,0:100:99:0,301,4176	0/0:181,0:181:99:0,545,7559	0/0:186,0:186:99:0,560,7767	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:158,0:158:99:0,476,6598	0/0:179,0:179:99:0,539,7475	0/0:191,0:191:99:0,575,7976	0/0:142,0:142:99:0,427,5930	0/0:200,0:200:99:0,602,8352	0/0:185,0:185:99:0,557,7726	0/0:219,0:219:99:0,659,9146	0/0:183,0:183:99:0,551,7642	0/0:77,0:77:99:0,232,3216	1/1:0,139:139:99:5805,418,0
gi|293339394|gb|GU595196.1|	108162	.	C	A	7141.04	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.780;DP=3271;Dels=0.00;FS=0.280;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.711;QD=41.76;ReadPosRankSum=2.058;SB=-3549.65	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:162,0:162:99:0,488,6765	0/0:122,0:122:99:0,367,5095	1/1:0,171:171:99:7141,515,0	0/0:86,0:86:99:0,259,3591	0/0:96,0:96:99:0,289,4009	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:198,0:198:99:0,596,8269	0/0:152,0:152:99:0,458,6348	0/0:170,0:170:99:0,512,7099	0/0:156,0:156:99:0,470,6515	0/0:144,0:144:99:0,433,6013	0/0:187,0:187:99:0,563,7809	0/0:143,0:143:99:0,430,5972	0/0:178,0:178:99:0,536,7433	0/0:156,0:156:99:0,470,6515	0/0:197,0:197:99:0,593,8227	0/0:160,0:160:99:0,482,6682	0/0:83,0:83:99:0,250,3466	0/0:215,0:215:99:0,647,8978
gi|293339394|gb|GU595196.1|	108182	.	C	T	24137.49	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.470;DP=3246;Dels=0.00;FS=0.330;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.702;QD=41.76;ReadPosRankSum=1.709;SB=-11859.95	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:162,0:162:99:0,488,6765	1/1:0,136:136:99:5679,409,0	1/1:0,168:168:99:7016,506,0	0/0:94,0:94:99:0,283,3925	0/0:105,0:105:99:0,316,4385	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:181,0:181:99:0,545,7559	0/0:144,0:144:99:0,433,6013	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:142,0:142:99:0,427,5930	0/0:174,0:174:99:0,524,7266	0/0:149,0:149:99:0,448,6222	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:176,0:176:99:0,530,7350	0/0:160,0:160:99:0,482,6682	1/1:0,75:75:99:3132,226,0	1/1:0,199:199:99:8310,599,0
gi|293339394|gb|GU595196.1|	108202	.	C	T	8519.13	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.085;DP=3253;Dels=0.00;FS=1.440;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.187;QD=41.76;ReadPosRankSum=4.405;SB=-4176.05	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:166,0:166:99:0,500,6932	0/0:150,0:150:99:0,452,6264	0/0:161,0:161:99:0,485,6723	0/0:111,0:111:99:0,334,4635	1/1:0,76:76:99:3174,229,0	1/1:0,128:128:99:5345,385,0	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:154,0:154:99:0,464,6431	0/0:183,0:183:99:0,551,7642	0/0:180,0:180:99:0,542,7517	0/0:155,0:155:99:0,467,6473	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	0/0:148,0:148:99:0,445,6181	0/0:180,0:180:99:0,542,7517	0/0:154,0:154:99:0,464,6431	0/0:163,0:163:99:0,491,6807	0/0:84,0:84:99:0,253,3508	0/0:213,0:213:99:0,641,8895
gi|293339394|gb|GU595196.1|	108215	.	C	T	8769.69	.	AC=4;AF=0.095;AN=42;BaseQRankSum=0.694;DP=3263;Dels=0.00;FS=1.102;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.725;QD=41.76;ReadPosRankSum=-5.121;SB=-4301.33	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:168,0:168:99:0,506,7016	0/0:143,0:143:99:0,430,5972	0/0:165,0:165:99:0,497,6890	0/0:102,0:102:99:0,307,4260	1/1:0,77:77:99:3216,232,0	1/1:0,133:133:99:5554,400,0	0/0:151,0:151:99:0,455,6306	0/0:162,0:162:99:0,488,6765	0/0:161,0:161:99:0,485,6723	0/0:178,0:178:99:0,536,7433	0/0:190,0:190:99:0,572,7934	0/0:158,0:158:99:0,476,6598	0/0:183,0:183:99:0,551,7642	0/0:190,0:190:99:0,572,7934	0/0:153,0:153:99:0,461,6389	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:160,0:160:99:0,482,6682	0/0:88,0:88:99:0,265,3675	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	108230	.	C	T	3549.65	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.201;DP=3305;Dels=0.00;FS=2.917;HRun=0;HaplotypeScore=12.4269;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.259;QD=41.76;ReadPosRankSum=1.492;SB=-1628.67	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:171,0:171:99:0,515,7141	0/0:136,0:136:99:0,409,5679	0/0:169,0:169:99:0,509,7057	0/0:103,0:103:99:0,310,4301	0/0:82,0:82:99:0,247,3424	0/0:140,0:140:99:0,421,5846	0/0:147,0:147:99:0,442,6139	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:196,0:196:99:0,590,8185	0/0:169,0:169:99:0,509,7057	0/0:193,0:193:99:0,581,8060	0/0:179,0:179:99:0,539,7475	0/0:179,0:179:99:0,539,7475	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	1/1:0,85:85:99:3550,256,0	0/0:203,0:203:99:0,611,8477
gi|293339394|gb|GU595196.1|	108236	.	A	C	8352.09	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.059;DP=3304;Dels=0.00;FS=12.394;HRun=1;HaplotypeScore=13.2839;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.013;QD=41.76;ReadPosRankSum=-0.748;SB=-3591.41	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:126,0:126:99:0,379,5262	0/0:166,0:166:99:0,500,6932	0/0:105,0:105:99:0,316,4385	0/0:87,0:87:99:0,262,3633	0/0:141,0:141:99:0,424,5888	0/0:148,0:148:99:0,445,6181	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:189,0:189:99:0,569,7893	0/0:165,0:165:99:0,497,6890	0/0:197,0:197:99:0,593,8227	0/0:176,0:176:99:0,530,7350	0/0:185,0:185:99:0,557,7726	0/0:151,0:151:99:0,455,6306	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:87,0:87:99:0,262,3633	1/1:0,200:200:99:8352,602,0
gi|293339394|gb|GU595196.1|	108238	.	G	C	33283	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.718;DP=3305;Dels=0.00;FS=4.562;HRun=1;HaplotypeScore=12.6174;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.318;QD=41.76;ReadPosRankSum=1.587;SB=-16077.75	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:175,0:175:99:0,527,7308	1/1:0,124:124:99:5178,373,0	1/1:0,167:167:99:6974,503,0	0/0:104,0:104:99:0,313,4343	1/1:0,82:82:99:3424,247,0	1/1:0,139:139:99:5805,418,0	0/0:146,0:146:99:0,439,6097	0/0:168,0:168:99:0,506,7016	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:188,0:188:99:0,566,7851	0/0:163,0:163:99:0,491,6807	0/0:195,0:195:99:0,587,8143	0/0:176,0:176:99:0,530,7350	0/0:190,0:190:99:0,572,7934	0/0:150,0:150:99:0,452,6264	0/0:175,0:175:99:0,527,7308	0/0:157,0:157:99:0,473,6556	1/1:0,92:92:99:3842,277,0	1/1:0,193:193:99:8060,581,0
gi|293339394|gb|GU595196.1|	108311	.	G	T	14824.94	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.539;DP=3259;Dels=0.00;FS=1.085;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.075;QD=41.76;ReadPosRankSum=0.332;SB=-7308.08	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:150,0:150:99:0,452,6264	1/1:0,130:130:99:5429,391,0	1/1:0,155:155:99:6473,467,0	0/0:92,0:92:99:0,277,3842	0/0:99,0:99:99:0,298,4134	0/0:159,0:159:99:0,479,6640	0/0:157,0:157:99:0,473,6556	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:154,0:154:99:0,464,6431	0/0:188,0:188:99:0,566,7851	0/0:156,0:156:99:0,470,6515	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:195,0:195:99:0,587,8143	0/0:184,0:184:99:0,554,7684	0/0:172,0:172:99:0,518,7183	1/1:0,70:70:99:2923,211,0	0/0:184,0:184:99:0,554,7684
gi|293339394|gb|GU595196.1|	108482	.	C	T	8143.28	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.836;DP=3247;Dels=0.00;FS=2.181;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.560;QD=41.76;ReadPosRankSum=-0.376;SB=-4009.01	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:155,0:155:99:0,467,6473	0/0:120,0:120:99:0,361,5011	0/0:148,0:148:99:0,445,6181	0/0:90,0:90:99:0,271,3758	0/0:118,0:118:99:0,355,4928	0/0:150,0:150:99:0,452,6264	0/0:162,0:162:99:0,488,6765	0/0:154,0:154:99:0,464,6431	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:178,0:178:99:0,536,7433	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:184,0:184:99:0,554,7684	0/0:180,0:180:99:0,542,7517	0/0:183,0:183:99:0,551,7642	0/0:154,0:154:99:0,464,6431	0/0:66,0:66:99:0,199,2756	1/1:0,195:195:99:8143,587,0
gi|293339394|gb|GU595196.1|	108515	.	C	A	19209.77	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.169;DP=3319;Dels=0.00;FS=2.621;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.022;QD=41.76;ReadPosRankSum=0.109;SB=-9437.85	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:154,0:154:99:0,464,6431	0/0:125,0:125:99:0,376,5220	0/0:167,0:167:99:0,503,6974	0/0:84,0:84:99:0,253,3508	1/1:0,112:112:99:4677,337,0	1/1:0,175:175:99:7308,527,0	1/1:0,173:173:99:7225,521,0	0/0:159,0:159:99:0,479,6640	0/0:175,0:175:99:0,527,7308	0/0:190,0:190:99:0,572,7934	0/0:170,0:170:99:0,512,7099	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	0/0:79,0:79:99:0,238,3299	0/0:195,0:195:99:0,587,8143
gi|293339394|gb|GU595196.1|	108545	.	C	T	33241.24	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.375;DP=3289;Dels=0.00;FS=3.338;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.025;QD=41.76;ReadPosRankSum=0.856;SB=-16620.63	GT:AD:DP:GQ:PL	0/0:144,0:144:99:0,433,6013	0/0:179,0:179:99:0,539,7475	1/1:0,114:114:99:4761,343,0	1/1:0,176:176:99:7350,530,0	0/0:88,0:88:99:0,265,3675	1/1:0,103:103:99:4301,310,0	1/1:0,168:168:99:7016,506,0	1/1:0,153:153:99:6389,461,0	0/0:157,0:157:99:0,473,6556	0/0:179,0:179:99:0,539,7475	0/0:190,0:190:99:0,572,7934	0/0:191,0:191:99:0,575,7976	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:164,0:164:99:0,494,6849	0/0:149,0:149:99:0,448,6222	0/0:165,0:165:99:0,497,6890	0/0:182,0:182:99:0,548,7600	0/0:170,0:170:99:0,512,7099	1/1:0,82:82:99:3424,247,0	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	108596	.	T	C,G	35036.94	.	AC=6,6;AF=0.143,0.143;AN=42;BaseQRankSum=-1.095;DP=3347;Dels=0.00;FS=7.557;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.471;QD=41.76;ReadPosRankSum=-0.994;SB=-10791.65	GT:AD:DP:GQ:PL	0/0:149,0,0:149:99:0,448,6222,448,6222,6222	0/0:155,0,0:155:99:0,467,6473,467,6473,6473	2/2:0,0,142:142:99:5930,5930,5930,427,427,0	2/2:0,0,166:166:99:6932,6932,6932,500,500,0	0/0:109,0,0:109:99:0,328,4552,328,4552,4552	1/1:0,101,0:101:99:4218,304,0,4218,304,4218	1/1:0,179,0:179:99:7475,539,0,7475,539,7475	1/1:0,165,0:165:99:6890,497,0,6890,497,6890	0/0:169,0,0:169:99:0,509,7057,509,7057,7057	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	0/0:180,0,0:180:99:0,542,7517,542,7517,7517	0/0:191,0,0:191:99:0,575,7976,575,7976,7976	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	0/0:194,0,0:194:99:0,584,8102,584,8102,8102	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:179,0,0:179:99:0,539,7475,539,7475,7475	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:166,0,0:166:99:0,500,6932,500,6932,6932	0/0:160,0,0:160:99:0,482,6682,482,6682,6682	2/2:0,0,86:86:99:3591,3591,3591,259,259,0	0/0:186,0,0:186:99:0,560,7767,560,7767,7767
gi|293339394|gb|GU595196.1|	108602	.	T	A	18792.17	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.619;DP=3337;Dels=0.00;FS=3.494;HRun=1;HaplotypeScore=16.7597;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.495;QD=41.76;ReadPosRankSum=0.600;SB=-8936.73	GT:AD:DP:GQ:PL	0/0:142,0:142:99:0,427,5930	0/0:168,0:168:99:0,506,7016	0/0:141,0:141:99:0,424,5888	0/0:175,0:175:99:0,527,7308	0/0:108,0:108:99:0,325,4510	1/1:0,98:98:99:4093,295,0	1/1:0,181:181:99:7559,545,0	1/1:0,171:171:99:7141,515,0	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:179,0:179:99:0,539,7475	0/0:191,0:191:99:0,575,7976	0/0:162,0:162:99:0,488,6765	0/0:196,0:196:99:0,590,8185	0/0:170,0:170:99:0,512,7099	0/0:183,0:183:99:0,551,7642	0/0:157,0:157:99:0,473,6556	0/0:160,0:160:99:0,482,6682	0/0:158,0:158:99:0,476,6598	0/0:80,0:80:99:0,241,3341	0/0:180,0:180:99:0,542,7517
gi|293339394|gb|GU595196.1|	108683	.	G	A	15868.95	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.944;DP=3170;Dels=0.00;FS=2.907;HRun=0;HaplotypeScore=11.6651;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.613;QD=41.76;ReadPosRankSum=5.373;SB=-7809.20	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:181,0:181:99:0,545,7559	0/0:89,0:89:99:0,268,3717	0/0:136,0:136:99:0,409,5679	0/0:85,0:85:99:0,256,3550	1/1:0,112:112:99:4677,337,0	1/1:0,128:128:99:5345,385,0	1/1:0,140:140:99:5846,421,0	0/0:152,0:152:99:0,458,6348	0/0:153,0:153:99:0,461,6389	0/0:190,0:190:99:0,572,7934	0/0:177,0:177:99:0,533,7392	0/0:209,0:209:99:0,629,8728	0/0:170,0:170:99:0,512,7099	0/0:178,0:178:99:0,536,7433	0/0:165,0:165:99:0,497,6890	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:156,0:156:99:0,470,6515	0/0:84,0:84:99:0,253,3508	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	108692	.	G	A	10231.30	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.992;DP=3122;Dels=0.00;FS=5.875;HRun=0;HaplotypeScore=28.1867;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.254;QD=41.76;ReadPosRankSum=2.919;SB=-4802.46	GT:AD:DP:GQ:PL	0/0:138,0:138:99:0,415,5763	0/0:193,0:193:99:0,581,8060	1/1:0,71:71:99:2965,214,0	1/1:0,111:111:99:4635,334,0	0/0:94,0:94:99:0,283,3925	0/0:110,0:110:99:0,331,4594	0/0:136,0:136:99:0,409,5679	0/0:141,0:141:99:0,424,5888	0/0:149,0:149:99:0,448,6222	0/0:156,0:156:99:0,470,6515	0/0:194,0:194:99:0,584,8102	0/0:172,0:172:99:0,518,7183	0/0:200,0:200:99:0,602,8352	0/0:170,0:170:99:0,512,7099	0/0:186,0:186:99:0,560,7767	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	0/0:159,0:159:99:0,479,6640	0/0:157,0:157:99:0,473,6556	1/1:0,63:63:99:2631,190,0	0/0:188,0:188:99:0,566,7851
gi|293339394|gb|GU595196.1|	108696	.	A	G	34285.25	.	AC=14;AF=0.333;AN=42;BaseQRankSum=3.078;DP=3121;Dels=0.00;FS=1.101;HRun=1;HaplotypeScore=9.9511;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.328;QD=41.76;ReadPosRankSum=-4.031;SB=-16912.95	GT:AD:DP:GQ:PL	0/0:139,0:139:99:0,418,5805	0/0:186,0:186:99:0,560,7767	1/1:0,82:82:99:3424,247,0	1/1:0,106:106:99:4427,319,0	0/0:91,0:91:99:0,274,3800	1/1:0,115:115:99:4802,346,0	1/1:0,140:140:99:5846,421,0	1/1:0,134:134:99:5596,403,0	0/0:147,0:147:99:0,442,6139	0/0:167,0:167:99:0,503,6974	0/0:198,0:198:99:0,596,8269	0/0:170,0:170:99:0,512,7099	0/0:193,0:193:99:0,581,8060	0/0:178,0:178:99:0,536,7433	0/0:186,0:186:99:0,560,7767	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:155,0:155:99:0,467,6473	1/1:0,54:54:99:2255,163,0	1/1:0,190:190:99:7934,572,0
gi|293339394|gb|GU595196.1|	108722	.	C	G	33241.24	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-1.378;DP=3113;Dels=0.00;FS=7.237;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.643;QD=41.76;ReadPosRankSum=4.440;SB=-15743.66	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:176,0:176:99:0,530,7350	1/1:0,85:85:99:3550,256,0	1/1:0,95:95:99:3967,286,0	0/0:95,0:95:99:0,286,3967	1/1:0,99:99:99:4134,298,0	1/1:0,133:133:99:5554,400,0	1/1:0,113:113:99:4719,340,0	0/0:144,0:144:99:0,433,6013	0/0:155,0:155:99:0,467,6473	0/0:175,0:175:99:0,527,7308	0/0:190,0:190:99:0,572,7934	0/0:172,0:172:99:0,518,7183	0/0:191,0:191:99:0,575,7976	0/0:201,0:201:99:0,605,8394	0/0:170,0:170:99:0,512,7099	0/0:158,0:158:99:0,476,6598	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	1/1:0,66:66:99:2756,199,0	1/1:0,205:205:99:8561,617,0
gi|293339394|gb|GU595196.1|	108749	.	C	T	26601.35	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-2.359;DP=3357;Dels=0.00;FS=8.342;HRun=1;HaplotypeScore=15.9503;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.277;QD=41.76;ReadPosRankSum=0.092;SB=-12569.88	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:123,0:123:99:0,370,5137	0/0:170,0:170:99:0,512,7099	0/0:101,0:101:99:0,304,4218	1/1:0,111:111:99:4635,334,0	1/1:0,168:168:99:7016,506,0	1/1:0,163:163:99:6807,491,0	0/0:166,0:166:99:0,500,6932	0/0:143,0:143:99:0,430,5972	0/0:186,0:186:99:0,560,7767	0/0:190,0:190:99:0,572,7934	0/0:157,0:157:99:0,473,6556	0/0:195,0:195:99:0,587,8143	0/0:176,0:176:99:0,530,7350	0/0:146,0:146:99:0,439,6097	0/0:151,0:151:99:0,455,6306	0/0:202,0:202:99:0,608,8436	0/0:176,0:176:99:0,530,7350	0/0:91,0:91:99:0,274,3800	1/1:0,195:195:99:8143,587,0
gi|293339394|gb|GU595196.1|	108755	.	T	A	15952.47	.	AC=6;AF=0.143;AN=42;BaseQRankSum=2.496;DP=3351;Dels=0.00;FS=4.146;HRun=0;HaplotypeScore=18.1881;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.081;QD=41.76;ReadPosRankSum=-1.029;SB=-7683.92	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	1/1:0,118:118:99:4928,355,0	1/1:0,177:177:99:7392,533,0	0/0:91,0:91:99:0,274,3800	0/0:109,0:109:99:0,328,4552	0/0:169,0:169:99:0,509,7057	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:147,0:147:99:0,442,6139	0/0:175,0:175:99:0,527,7308	0/0:192,0:192:99:0,578,8018	0/0:168,0:168:99:0,506,7016	0/0:188,0:188:99:0,566,7851	0/0:179,0:179:99:0,539,7475	0/0:159,0:159:99:0,479,6640	0/0:149,0:149:99:0,448,6222	0/0:194,0:194:99:0,584,8102	0/0:169,0:169:99:0,509,7057	1/1:0,87:87:99:3633,262,0	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	108800	.	T	C	45059.42	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.254;DP=3393;Dels=0.00;FS=0.541;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.726;QD=41.76;ReadPosRankSum=-1.180;SB=-22425.32	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:149,0:149:99:0,448,6222	1/1:0,151:151:99:6306,455,0	1/1:0,181:181:99:7559,545,0	0/0:94,0:94:99:0,283,3925	1/1:0,116:116:99:4844,349,0	1/1:0,186:186:99:7767,560,0	1/1:0,178:178:99:7433,536,0	0/0:170,0:170:99:0,512,7099	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:214,0:214:99:0,644,8937	0/0:188,0:188:99:0,566,7851	0/0:158,0:158:99:0,476,6598	0/0:159,0:159:99:0,479,6640	0/0:176,0:176:99:0,530,7350	0/0:149,0:149:99:0,448,6222	0/0:159,0:159:99:0,479,6640	1/1:0,77:77:99:3216,232,0	1/1:0,190:190:99:7934,572,0
gi|293339394|gb|GU595196.1|	108833	.	C	T	20170.26	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.090;DP=3375;Dels=0.00;FS=11.620;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.269;QD=41.76;ReadPosRankSum=0.995;SB=-9270.81	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:157,0:157:99:0,473,6556	0/0:123,0:123:99:0,370,5137	0/0:153,0:153:99:0,461,6389	0/0:90,0:90:99:0,271,3758	1/1:0,125:125:99:5220,376,0	1/1:0,157:157:99:6556,473,0	1/1:0,201:201:99:8394,605,0	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:173,0:173:99:0,521,7225	0/0:206,0:206:99:0,620,8603	0/0:184,0:184:99:0,554,7684	0/0:190,0:190:99:0,572,7934	0/0:159,0:159:99:0,479,6640	0/0:181,0:181:99:0,545,7559	0/0:169,0:169:99:0,509,7057	0/0:138,0:138:99:0,415,5763	0/0:161,0:161:99:0,485,6723	0/0:81,0:81:99:0,244,3383	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	108898	.	C	A	18416.33	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.180;DP=3262;Dels=0.00;FS=0.979;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.379;QD=41.76;ReadPosRankSum=0.297;SB=-9020.25	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:123,0:123:99:0,370,5137	0/0:102,0:102:99:0,307,4260	0/0:101,0:101:99:0,304,4218	1/1:0,118:118:99:4928,355,0	1/1:0,171:171:99:7141,515,0	1/1:0,152:152:99:6348,458,0	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:188,0:188:99:0,566,7851	0/0:149,0:149:99:0,448,6222	0/0:186,0:186:99:0,560,7767	0/0:176,0:176:99:0,530,7350	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:192,0:192:99:0,578,8018	0/0:60,0:60:99:0,181,2506	0/0:219,0:219:99:0,659,9146
gi|293339394|gb|GU595196.1|	108937	.	C	G	7182.80	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.094;DP=3242;Dels=0.00;FS=1.226;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.328;QD=41.76;ReadPosRankSum=-0.222;SB=-3549.65	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:116,0:116:99:0,349,4844	0/0:125,0:125:99:0,376,5220	0/0:118,0:118:99:0,355,4928	0/0:116,0:116:99:0,349,4844	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:185,0:185:99:0,557,7726	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:179,0:179:99:0,539,7475	0/0:153,0:153:99:0,461,6389	0/0:180,0:180:99:0,542,7517	0/0:50,0:50:99:0,151,2088	1/1:0,172:172:99:7183,518,0
gi|293339394|gb|GU595196.1|	108971	.	A	T	19794.42	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.539;DP=3228;Dels=0.00;FS=4.002;HRun=0;HaplotypeScore=21.9971;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.604;QD=41.76;ReadPosRankSum=-0.635;SB=-9604.90	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:105,0:105:99:0,316,4385	0/0:144,0:144:99:0,433,6013	0/0:97,0:97:99:0,292,4051	1/1:0,122:122:99:5095,367,0	1/1:0,163:163:99:6807,491,0	1/1:0,189:189:99:7893,569,0	0/0:178,0:178:99:0,536,7433	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:161,0:161:99:0,485,6723	0/0:191,0:191:99:0,575,7976	0/0:168,0:168:99:0,506,7016	0/0:149,0:149:99:0,448,6222	0/0:157,0:157:99:0,473,6556	0/0:163,0:163:99:0,491,6807	0/0:160,0:160:99:0,482,6682	0/0:147,0:147:99:0,442,6139	0/0:79,0:79:99:0,238,3299	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	108976	.	G	A,T	41593.31	.	AC=6,8;AF=0.143,0.190;AN=42;BaseQRankSum=-1.672;DP=3234;Dels=0.00;FS=0.486;HaplotypeScore=13.9029;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.828;QD=41.76;ReadPosRankSum=0.177;SB=-19787.73	GT:AD:DP:GQ:PL	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	1/1:0,108,0:108:99:4510,325,0,4510,325,4510	1/1:0,152,0:152:99:6348,458,0,6348,458,6348	0/0:91,0,0:91:99:0,274,3800,274,3800,3800	2/2:0,0,120:120:99:5011,5011,5011,361,361,0	2/2:0,0,160:160:99:6682,6682,6682,482,482,0	2/2:0,0,192:192:99:8018,8018,8018,578,578,0	0/0:174,0,0:174:99:0,524,7266,524,7266,7266	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:164,0,0:164:99:0,494,6849,494,6849,6849	0/0:161,0,0:161:99:0,485,6723,485,6723,6723	0/0:185,0,0:185:99:0,557,7726,557,7726,7726	0/0:164,0,0:164:99:0,494,6849,494,6849,6849	0/0:150,0,0:150:99:0,452,6264,452,6264,6264	0/0:160,0,0:160:99:0,482,6682,482,6682,6682	0/0:160,0,0:160:99:0,482,6682,482,6682,6682	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	0/0:158,0,0:158:99:0,476,6598,476,6598,6598	1/1:0,80,0:80:99:3341,241,0,3341,241,3341	2/2:0,0,184:184:99:7684,7684,7684,554,554,0
gi|293339394|gb|GU595196.1|	108983	.	G	T	8018	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.086;DP=3250;Dels=0.00;FS=1.835;HRun=1;HaplotypeScore=23.2350;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.459;QD=41.76;ReadPosRankSum=0.654;SB=-3841.97	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	1/1:0,110:110:99:4594,331,0	0/0:150,0:150:99:0,452,6264	0/0:84,0:84:99:0,253,3508	0/0:115,0:115:99:0,346,4802	0/0:161,0:161:99:0,485,6723	0/0:196,0:196:99:0,590,8185	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:192,0:192:99:0,578,8018	0/0:168,0:168:99:0,506,7016	0/0:151,0:151:99:0,455,6306	0/0:158,0:158:99:0,476,6598	0/0:159,0:159:99:0,479,6640	0/0:170,0:170:99:0,512,7099	0/0:150,0:150:99:0,452,6264	1/1:0,82:82:99:3424,247,0	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	109034	.	A	G,T	45184.70	.	AC=6,8;AF=0.143,0.190;AN=42;BaseQRankSum=-0.160;DP=3392;Dels=0.00;FS=2.604;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.062;QD=41.76;ReadPosRankSum=0.627;SB=-21257.08	GT:AD:DP:GQ:PL	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:154,0,0:154:99:0,464,6431,464,6431,6431	2/2:0,0,133:133:99:5554,5554,5554,400,400,0	2/2:0,0,164:164:99:6849,6849,6849,494,494,0	0/0:85,0,0:85:99:0,256,3550,256,3550,3550	1/1:0,125,0:125:99:5220,376,0,5220,376,5220	1/1:0,170,0:170:99:7099,512,0,7099,512,7099	1/1:0,196,0:196:99:8185,590,0,8185,590,8185	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	0/0:190,0,0:190:99:0,572,7934,572,7934,7934	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:188,0,0:188:99:0,566,7851,566,7851,7851	0/0:188,0,0:188:99:0,566,7851,566,7851,7851	0/0:185,0,0:185:99:0,557,7726,557,7726,7726	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	0/0:160,0,0:160:99:0,482,6682,482,6682,6682	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	2/2:0,0,89:89:99:3717,3717,3717,268,268,0	2/2:0,0,205:205:99:8561,8561,8561,617,617,0
gi|293339394|gb|GU595196.1|	109097	.	G	T	2126.81	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-1.498;DP=3075;Dels=0.00;FS=3.904;HRun=1;HaplotypeScore=2.5235;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.974;QD=40.13;ReadPosRankSum=-6.650;SB=-960.09	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:184,0:184:99:0,554,7684	0/0:31,0:31:93.31:0,93,1295	1/1:0,38:38:99:1587,114,0	0/0:92,0:92:99:0,277,3842	0/0:101,0:101:99:0,304,4218	0/0:173,0:173:99:0,521,7225	0/0:189,0:189:99:0,569,7893	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	0/0:160,0:160:99:0,482,6682	0/0:164,0:164:99:0,494,6849	0/0:174,0:174:99:0,524,7266	0/0:180,0:180:99:0,542,7517	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:154,0:154:99:0,464,6431	0/0:189,0:189:99:0,569,7893	1/1:0,15:15:45.15:626,45,0	0/0:214,0:214:99:0,644,8937
gi|293339394|gb|GU595196.1|	109100	.	A	G	30401.54	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.869;DP=3059;Dels=0.00;FS=0.150;HRun=2;HaplotypeScore=2.3330;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.524;QD=41.76;ReadPosRankSum=-0.818;SB=-14991.43	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	1/1:0,26:26:78.26:1086,78,0	1/1:0,28:28:84.28:1169,84,0	0/0:89,0:89:99:0,268,3717	1/1:0,101:101:99:4218,304,0	1/1:0,176:176:99:7350,530,0	1/1:0,179:179:99:7475,539,0	0/0:179,0:179:99:0,539,7475	0/0:176,0:176:99:0,530,7350	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:173,0:173:99:0,521,7225	0/0:183,0:183:99:0,551,7642	0/0:161,0:161:99:0,485,6723	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:154,0:154:99:0,464,6431	0/0:191,0:191:99:0,575,7976	1/1:0,10:10:30.10:418,30,0	1/1:0,208:208:99:8686,626,0
gi|293339394|gb|GU595196.1|	109109	.	A	G	398.06	.	AC=2;AF=0.053;AN=38;BaseQRankSum=0.106;DP=2947;Dels=0.00;FS=8.685;HRun=0;HaplotypeScore=0.5789;InbreedingCoeff=0.9997;MQ=254.00;MQ0=0;MQRankSum=0.423;QD=36.19;ReadPosRankSum=-5.012;SB=-124.35	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:178,0:178:99:0,536,7433	1/1:0,11:11:33.11:459,33,0	./.	0/0:84,0:84:99:0,253,3508	0/0:94,0:94:99:0,283,3925	0/0:186,0:186:99:0,560,7767	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:157,0:157:99:0,473,6556	0/0:167,0:167:99:0,503,6974	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:143,0:143:99:0,430,5972	0/0:181,0:181:99:0,545,7559	./.	0/0:209,0:209:99:0,629,8728
gi|293339394|gb|GU595196.1|	109118	.	G	A	1358.05	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.361;DP=2976;Dels=0.00;FS=4.003;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9955;MQ=254.00;MQ0=0;MQRankSum=0.418;QD=38.80;ReadPosRankSum=-8.117;SB=-578.30	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:177,0:177:99:0,533,7392	1/1:0,7:7:21.07:292,21,0	1/1:0,22:22:66.22:919,66,0	0/0:89,0:89:99:0,268,3717	0/0:101,0:101:99:0,304,4218	0/0:186,0:186:99:0,560,7767	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	0/0:173,0:173:99:0,521,7225	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:176,0:176:99:0,530,7350	0/0:159,0:159:99:0,479,6640	0/0:143,0:143:99:0,430,5972	0/0:190,0:190:99:0,572,7934	1/1:0,6:6:18.06:251,18,0	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	109136	.	G	A,C	33199.48	.	AC=6,8;AF=0.143,0.190;AN=42;BaseQRankSum=-0.366;DP=3031;Dels=0.00;FS=5.897;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.142;QD=41.76;ReadPosRankSum=-2.726;SB=-14532.15	GT:AD:DP:GQ:PL	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	2/2:0,0,52:52:99:2172,2172,2172,157,157,0	2/2:0,0,74:74:99:3090,3090,3090,223,223,0	0/0:94,0,0:94:99:0,283,3925,283,3925,3925	1/1:0,112,0:112:99:4677,337,0,4677,337,4677	1/1:0,190,0:190:99:7934,572,0,7934,572,7934	1/1:0,171,0:171:99:7141,515,0,7141,515,7141	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	0/0:178,0,0:178:99:0,536,7433,536,7433,7433	0/0:156,0,0:156:99:0,470,6515,470,6515,6515	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:169,0,0:169:99:0,509,7057,509,7057,7057	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:154,0,0:154:99:0,464,6431,464,6431,6431	0/0:137,0,0:137:99:0,412,5721,412,5721,5721	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	2/2:0,0,34:34:99:1420,1420,1420,102,102,0	2/2:0,0,162:162:99:6765,6765,6765,488,488,0
gi|293339394|gb|GU595196.1|	109193	.	C	T	12569.88	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.578;DP=3222;Dels=0.00;FS=24.387;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.401;QD=41.76;ReadPosRankSum=-0.682;SB=-5053.02	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:166,0:166:99:0,500,6932	1/1:0,115:115:99:4802,346,0	1/1:0,116:116:99:4844,349,0	0/0:105,0:105:99:0,316,4385	0/0:99,0:99:99:0,298,4134	0/0:152,0:152:99:0,458,6348	0/0:150,0:150:99:0,452,6264	0/0:174,0:174:99:0,524,7266	0/0:154,0:154:99:0,464,6431	0/0:180,0:180:99:0,542,7517	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:183,0:183:99:0,551,7642	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	1/1:0,70:70:99:2923,211,0	0/0:187,0:187:99:0,563,7809
gi|293339394|gb|GU595196.1|	109218	.	A	G	11818.19	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.269;DP=3146;Dels=0.00;FS=14.025;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.019;QD=41.76;ReadPosRankSum=0.745;SB=-5053.02	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:161,0:161:99:0,485,6723	1/1:0,106:106:99:4427,319,0	1/1:0,116:116:99:4844,349,0	0/0:90,0:90:99:0,271,3758	0/0:89,0:89:99:0,268,3717	0/0:140,0:140:99:0,421,5846	0/0:154,0:154:99:0,464,6431	0/0:179,0:179:99:0,539,7475	0/0:156,0:156:99:0,470,6515	0/0:168,0:168:99:0,506,7016	0/0:162,0:162:99:0,488,6765	0/0:173,0:173:99:0,521,7225	0/0:163,0:163:99:0,491,6807	0/0:186,0:186:99:0,560,7767	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	0/0:163,0:163:99:0,491,6807	1/1:0,61:61:99:2547,184,0	0/0:226,0:226:99:0,680,9438
gi|293339394|gb|GU595196.1|	109328	.	G	A	8686.17	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.397;DP=3089;Dels=0.00;FS=5.492;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.869;QD=41.76;ReadPosRankSum=-0.387;SB=-3883.73	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:189,0:189:99:0,569,7893	1/1:0,68:68:99:2840,205,0	1/1:0,95:95:99:3967,286,0	0/0:84,0:84:99:0,253,3508	0/0:101,0:101:99:0,304,4218	0/0:124,0:124:99:0,373,5178	0/0:177,0:177:99:0,533,7392	0/0:184,0:184:99:0,554,7684	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:156,0:156:99:0,470,6515	0/0:192,0:192:99:0,578,8018	0/0:163,0:163:99:0,491,6807	0/0:141,0:141:99:0,424,5888	0/0:171,0:171:99:0,515,7141	0/0:192,0:192:99:0,578,8018	1/1:0,45:45:99:1879,135,0	0/0:160,0:160:99:0,482,6682
gi|293339394|gb|GU595196.1|	109343	.	T	C	9604.90	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.048;DP=3118;Dels=0.00;FS=13.292;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.016;QD=41.76;ReadPosRankSum=-0.082;SB=-3925.49	GT:AD:DP:GQ:PL	0/0:206,0:206:99:0,620,8603	0/0:174,0:174:99:0,524,7266	1/1:0,75:75:99:3132,226,0	1/1:0,102:102:99:4260,307,0	0/0:77,0:77:99:0,232,3216	0/0:91,0:91:99:0,274,3800	0/0:138,0:138:99:0,415,5763	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:180,0:180:99:0,542,7517	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:193,0:193:99:0,581,8060	1/1:0,53:53:99:2213,160,0	0/0:158,0:158:99:0,476,6598
gi|293339394|gb|GU595196.1|	109376	.	C	T	9563.14	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.988;DP=2746;Dels=0.00;FS=33.923;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.990;QD=41.76;ReadPosRankSum=2.785;SB=-3466.13	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:156,0:156:99:0,470,6515	0/0:40,0:40:99:0,120,1670	0/0:62,0:62:99:0,187,2589	0/0:89,0:89:99:0,268,3717	1/1:0,38:38:99:1587,114,0	1/1:0,89:89:99:3717,268,0	1/1:0,102:102:99:4260,307,0	0/0:156,0:156:99:0,470,6515	0/0:157,0:157:99:0,473,6556	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:154,0:154:99:0,464,6431	0/0:173,0:173:99:0,521,7225	0/0:149,0:149:99:0,448,6222	0/0:183,0:183:99:0,551,7642	0/0:157,0:157:99:0,473,6556	0/0:141,0:141:99:0,424,5888	0/0:178,0:178:99:0,536,7433	0/0:36,0:36:99:0,108,1503	0/0:164,0:164:99:0,494,6849
gi|293339394|gb|GU595196.1|	109404	.	T	G	14240.29	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-0.695;DP=2584;Dels=0.00;FS=21.259;HRun=0;HaplotypeScore=6.4753;InbreedingCoeff=0.9983;MQ=254.00;MQ0=0;MQRankSum=0.930;QD=41.76;ReadPosRankSum=-1.420;SB=-6054.83	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:156,0:156:99:0,470,6515	1/1:0,7:7:21.07:292,21,0	1/1:0,8:8:24.08:334,24,0	0/0:93,0:93:99:0,280,3884	1/1:0,13:13:39.13:543,39,0	1/1:0,27:27:81.27:1128,81,0	1/1:0,96:96:99:4009,289,0	0/0:160,0:160:99:0,482,6682	0/0:158,0:158:99:0,476,6598	0/0:181,0:181:99:0,545,7559	0/0:161,0:161:99:0,485,6723	0/0:159,0:159:99:0,479,6640	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:186,0:186:99:0,560,7767	0/0:159,0:159:99:0,479,6640	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	1/1:0,8:8:24.08:334,24,0	1/1:0,182:182:99:7600,548,0
gi|293339394|gb|GU595196.1|	109406	.	C	G	6138.79	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.995;DP=2585;Dels=0.00;FS=15.691;HRun=0;HaplotypeScore=6.9991;InbreedingCoeff=0.9860;MQ=254.00;MQ0=0;MQRankSum=0.729;QD=41.76;ReadPosRankSum=3.204;SB=-2463.24	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	1/1:0,5:5:15.05:209,15,0	1/1:0,5:5:15.05:209,15,0	0/0:95,0:95:99:0,286,3967	1/1:0,17:17:51.17:710,51,0	1/1:0,21:21:63.21:877,63,0	1/1:0,95:95:99:3967,286,0	0/0:158,0:158:99:0,476,6598	0/0:155,0:155:99:0,467,6473	0/0:181,0:181:99:0,545,7559	0/0:161,0:161:99:0,485,6723	0/0:162,0:162:99:0,488,6765	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:186,0:186:99:0,560,7767	0/0:160,0:160:99:0,482,6682	0/0:163,0:163:99:0,491,6807	0/0:163,0:163:99:0,491,6807	1/1:0,4:4:12.04:167,12,0	0/0:184,0:184:99:0,554,7684
gi|293339394|gb|GU595196.1|	109409	.	C	T	192.44	.	AC=2;AF=0.053;AN=38;BaseQRankSum=0.057;DP=2595;Dels=0.00;FS=6.598;HRun=2;HaplotypeScore=7.3148;InbreedingCoeff=0.9918;MQ=254.00;MQ0=0;MQRankSum=-0.764;QD=32.07;ReadPosRankSum=-3.518;SB=-39.91	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	./.	1/1:0,6:6:18.06:251,18,0	0/0:94,0:94:99:0,283,3925	0/0:28,0:28:84.28:0,84,1169	0/0:35,0:35:99:0,105,1462	0/0:102,0:102:99:0,307,4260	0/0:161,0:161:99:0,485,6723	0/0:148,0:148:99:0,445,6181	0/0:180,0:180:99:0,542,7517	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:172,0:172:99:0,518,7183	0/0:165,0:165:99:0,497,6890	0/0:182,0:182:99:0,548,7600	0/0:158,0:158:99:0,476,6598	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	./.	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	109434	.	A	T	11191.79	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.466;DP=2860;Dels=0.00;FS=102.726;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.687;QD=41.76;ReadPosRankSum=2.762;SB=-3173.80	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	1/1:0,51:51:99:2130,154,0	1/1:0,51:51:99:2130,154,0	0/0:91,0:91:99:0,274,3800	1/1:0,66:66:99:2756,199,0	1/1:0,72:72:99:3007,217,0	0/0:166,0:166:99:0,500,6932	0/0:192,0:192:99:0,578,8018	0/0:162,0:162:99:0,488,6765	0/0:182,0:182:99:0,548,7600	0/0:143,0:143:99:0,430,5972	0/0:160,0:160:99:0,482,6682	0/0:188,0:188:99:0,566,7851	0/0:161,0:161:99:0,485,6723	0/0:166,0:166:99:0,500,6932	0/0:141,0:141:99:0,424,5888	0/0:164,0:164:99:0,494,6849	0/0:165,0:165:99:0,497,6890	1/1:0,28:28:84.28:1169,84,0	0/0:178,0:178:99:0,536,7433
gi|293339394|gb|GU595196.1|	109454	.	C	T	3925.49	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.083;DP=3050;Dels=0.00;FS=88.322;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.186;QD=41.76;ReadPosRankSum=4.580;SB=-668.18	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	1/1:0,61:61:99:2547,184,0	0/0:88,0:88:99:0,265,3675	0/0:94,0:94:99:0,283,3925	0/0:102,0:102:99:0,307,4260	0/0:133,0:133:99:0,400,5554	0/0:172,0:172:99:0,518,7183	0/0:185,0:185:99:0,557,7726	0/0:179,0:179:99:0,539,7475	0/0:177,0:177:99:0,533,7392	0/0:159,0:159:99:0,479,6640	0/0:159,0:159:99:0,479,6640	0/0:183,0:183:99:0,551,7642	0/0:154,0:154:99:0,464,6431	0/0:155,0:155:99:0,467,6473	0/0:157,0:157:99:0,473,6556	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	1/1:0,33:33:99:1378,99,0	0/0:185,0:185:99:0,557,7726
gi|293339394|gb|GU595196.1|	109487	.	A	G	19752.66	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.807;DP=3174;Dels=0.00;FS=74.684;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.004;QD=41.76;ReadPosRankSum=2.076;SB=-6806.95	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:176,0:176:99:0,530,7350	1/1:0,51:51:99:2130,154,0	1/1:0,104:104:99:4343,313,0	0/0:94,0:94:99:0,283,3925	1/1:0,107:107:99:4468,322,0	1/1:0,158:158:99:6598,476,0	0/0:177,0:177:99:0,533,7392	0/0:184,0:184:99:0,554,7684	0/0:174,0:174:99:0,524,7266	0/0:161,0:161:99:0,485,6723	0/0:191,0:191:99:0,575,7976	0/0:172,0:172:99:0,518,7183	0/0:185,0:185:99:0,557,7726	0/0:172,0:172:99:0,518,7183	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	1/1:0,53:53:99:2213,160,0	0/0:188,0:188:99:0,566,7851
gi|293339394|gb|GU595196.1|	109492	.	G	A	19627.38	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.836;DP=3128;Dels=0.00;FS=61.975;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.524;QD=41.76;ReadPosRankSum=3.225;SB=-6973.99	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:179,0:179:99:0,539,7475	1/1:0,50:50:99:2088,151,0	1/1:0,98:98:99:4093,295,0	0/0:87,0:87:99:0,262,3633	1/1:0,104:104:99:4343,313,0	1/1:0,159:159:99:6640,479,0	0/0:171,0:171:99:0,515,7141	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:201,0:201:99:0,605,8394	0/0:174,0:174:99:0,524,7266	0/0:182,0:182:99:0,548,7600	0/0:171,0:171:99:0,515,7141	0/0:151,0:151:99:0,455,6306	0/0:164,0:164:99:0,494,6849	0/0:161,0:161:99:0,485,6723	0/0:166,0:166:99:0,500,6932	1/1:0,59:59:99:2464,178,0	0/0:182,0:182:99:0,548,7600
gi|293339394|gb|GU595196.1|	109538	.	A	G	803.18	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.288;DP=2624;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9069;MQ=254.00;MQ0=0;MQRankSum=0.578;QD=36.51;ReadPosRankSum=-7.307;SB=-429.75	GT:AD:DP:GQ:PL	0/0:155,0:155:99:0,467,6473	0/0:169,0:169:99:0,509,7057	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	0/0:98,0:98:99:0,295,4093	1/1:0,2:2:6.02:84,6,0	1/1:0,11:11:33.11:459,33,0	0/0:168,0:168:99:0,506,7016	0/0:161,0:161:99:0,485,6723	0/0:169,0:169:99:0,509,7057	0/0:182,0:182:99:0,548,7600	0/0:169,0:169:99:0,509,7057	0/0:191,0:191:99:0,575,7976	0/0:170,0:170:99:0,512,7099	0/0:167,0:167:99:0,503,6974	0/0:167,0:167:99:0,503,6974	0/0:153,0:153:99:0,461,6389	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	1/1:0,5:5:15.05:209,15,0	0/0:165,0:165:99:0,497,6890
gi|293339394|gb|GU595196.1|	109583	.	G	A	5428.86	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.396;DP=2683;Dels=0.00;FS=6.811;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.290;QD=41.76;ReadPosRankSum=10.741;SB=-2380.30	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	1/1:0,20:20:60.20:835,60,0	1/1:0,26:26:78.26:1086,78,0	0/0:98,0:98:99:0,295,4093	1/1:0,26:26:78.26:1086,78,0	1/1:0,37:37:99:1545,111,0	0/0:151,0:151:99:0,455,6306	0/0:153,0:153:99:0,461,6389	0/0:149,0:149:99:0,448,6222	0/0:157,0:157:99:0,473,6556	0/0:166,0:166:99:0,500,6932	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:149,0:149:99:0,448,6222	0/0:149,0:149:99:0,448,6222	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	1/1:0,21:21:63.21:877,63,0	0/0:207,0:207:99:0,623,8644
gi|293339394|gb|GU595196.1|	109584	.	C	A	6055.27	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.829;DP=2716;Dels=0.00;FS=8.330;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.770;QD=41.76;ReadPosRankSum=6.777;SB=-2630.91	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	1/1:0,24:24:72.24:1002,72,0	1/1:0,32:32:96.32:1336,96,0	0/0:96,0:96:99:0,289,4009	1/1:0,26:26:78.26:1086,78,0	1/1:0,41:41:99:1712,123,0	0/0:150,0:150:99:0,452,6264	0/0:157,0:157:99:0,473,6556	0/0:148,0:148:99:0,445,6181	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:187,0:187:99:0,563,7809	0/0:176,0:176:99:0,530,7350	0/0:173,0:173:99:0,521,7225	0/0:146,0:146:99:0,439,6097	0/0:146,0:146:99:0,439,6097	0/0:172,0:172:99:0,518,7183	0/0:165,0:165:99:0,497,6890	1/1:0,22:22:66.22:919,66,0	0/0:206,0:206:99:0,620,8603
gi|293339394|gb|GU595196.1|	109608	.	C	T	7224.56	.	AC=12;AF=0.286;AN=42;BaseQRankSum=2.578;DP=2560;Dels=0.00;FS=13.128;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9953;MQ=254.00;MQ0=0;MQRankSum=-0.391;QD=41.76;ReadPosRankSum=6.536;SB=-2962.29	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:181,0:181:99:0,545,7559	1/1:0,9:9:27.09:376,27,0	1/1:0,12:12:36.12:501,36,0	0/0:102,0:102:99:0,307,4260	1/1:0,5:5:15.05:209,15,0	1/1:0,20:20:60.20:835,60,0	0/0:148,0:148:99:0,445,6181	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	0/0:185,0:185:99:0,557,7726	0/0:166,0:166:99:0,500,6932	0/0:160,0:160:99:0,482,6682	0/0:138,0:138:99:0,415,5763	0/0:165,0:165:99:0,497,6890	0/0:157,0:157:99:0,473,6556	1/1:0,7:7:21.07:292,21,0	1/1:0,120:120:99:5011,361,0
gi|293339394|gb|GU595196.1|	109634	.	T	C	8686.17	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.764;DP=2678;Dels=0.00;FS=25.178;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.236;QD=41.76;ReadPosRankSum=5.852;SB=-3382.60	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:179,0:179:99:0,539,7475	1/1:0,28:28:84.28:1169,84,0	1/1:0,28:28:84.28:1169,84,0	0/0:92,0:92:99:0,277,3842	1/1:0,31:31:93.31:1295,93,0	1/1:0,54:54:99:2255,163,0	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:156,0:156:99:0,470,6515	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:149,0:149:99:0,448,6222	0/0:189,0:189:99:0,569,7893	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:187,0:187:99:0,563,7809	0/0:165,0:165:99:0,497,6890	1/1:0,21:21:63.21:877,63,0	1/1:0,46:46:99:1921,138,0
gi|293339394|gb|GU595196.1|	109638	.	A	G	7892.72	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.780;DP=2663;Dels=0.00;FS=14.605;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.155;QD=41.76;ReadPosRankSum=10.401;SB=-3299.07	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	1/1:0,23:23:69.23:960,69,0	1/1:0,22:22:66.22:919,66,0	0/0:94,0:94:99:0,283,3925	1/1:0,30:30:90.30:1253,90,0	1/1:0,51:51:99:2130,154,0	0/0:163,0:163:99:0,491,6807	0/0:172,0:172:99:0,518,7183	0/0:155,0:155:99:0,467,6473	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:149,0:149:99:0,448,6222	0/0:187,0:187:99:0,563,7809	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:162,0:162:99:0,488,6765	0/0:189,0:189:99:0,569,7893	0/0:165,0:165:99:0,497,6890	1/1:0,20:20:60.20:835,60,0	1/1:0,43:43:99:1796,129,0
gi|293339394|gb|GU595196.1|	109669	.	C	T	14031.49	.	AC=8;AF=0.211;AN=38;BaseQRankSum=-2.336;DP=2749;Dels=0.00;FS=9.364;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.502;QD=41.76;ReadPosRankSum=7.182;SB=-6305.83	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:159,0:159:99:0,479,6640	./.	./.	0/0:88,0:88:99:0,265,3675	1/1:0,66:66:99:2756,199,0	1/1:0,92:92:99:3842,277,0	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:149,0:149:99:0,448,6222	0/0:166,0:166:99:0,500,6932	0/0:181,0:181:99:0,545,7559	0/0:168,0:168:99:0,506,7016	0/0:184,0:184:99:0,554,7684	0/0:164,0:164:99:0,494,6849	0/0:155,0:155:99:0,467,6473	0/0:158,0:158:99:0,476,6598	0/0:179,0:179:99:0,539,7475	0/0:169,0:169:99:0,509,7057	1/1:0,37:37:99:1545,111,0	1/1:0,141:141:99:5888,424,0
gi|293339394|gb|GU595196.1|	109760	.	T	C	34.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.620;DP=2857;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0952;InbreedingCoeff=0.8839;MQ=254.00;MQ0=0;MQRankSum=-0.966;QD=17.25;ReadPosRankSum=-0.254;SB=-38.86	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:166,0:166:99:0,500,6932	0/0:18,0:18:54.18:0,54,752	1/1:0,2:2:6.02:84,6,0	0/0:91,0:91:99:0,274,3800	0/0:64,0:64:99:0,193,2673	0/0:119,0:119:99:0,358,4969	0/0:159,0:159:99:0,479,6640	0/0:161,0:161:99:0,485,6723	0/0:163,0:163:99:0,491,6807	0/0:161,0:161:99:0,485,6723	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:163,0:163:99:0,491,6807	0/0:157,0:157:99:0,473,6556	0/0:179,0:179:99:0,539,7475	0/0:152,0:152:99:0,458,6348	0/0:178,0:178:99:0,536,7433	0/0:144,0:144:99:0,433,6013	0/0:46,0:46:99:0,138,1921	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	109765	.	G	A	19460.33	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.372;DP=2872;Dels=0.00;FS=60.718;HRun=0;HaplotypeScore=0.0952;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.070;QD=41.76;ReadPosRankSum=-0.581;SB=-7348.55	GT:AD:DP:GQ:PL	0/0:192,0:192:99:0,578,8018	0/0:167,0:167:99:0,503,6974	1/1:0,27:27:81.27:1128,81,0	1/1:0,10:10:30.10:418,30,0	0/0:93,0:93:99:0,280,3884	1/1:0,67:67:99:2798,202,0	1/1:0,114:114:99:4761,343,0	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:157,0:157:99:0,473,6556	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	0/0:169,0:169:99:0,509,7057	0/0:142,0:142:99:0,427,5930	1/1:0,50:50:99:2088,151,0	1/1:0,198:198:99:8269,596,0
gi|293339394|gb|GU595196.1|	109798	.	C	A	3299.09	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.632;DP=2895;Dels=0.00;FS=30.919;HRun=0;HaplotypeScore=2.9044;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.641;QD=41.76;ReadPosRankSum=-0.554;SB=-918.75	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:145,0:145:99:0,436,6055	1/1:0,79:79:99:3299,238,0	0/0:63,0:63:99:0,190,2631	0/0:87,0:87:99:0,262,3633	0/0:62,0:62:99:0,187,2589	0/0:96,0:96:99:0,289,4009	0/0:149,0:149:99:0,448,6222	0/0:169,0:169:99:0,509,7057	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:195,0:195:99:0,587,8143	0/0:177,0:177:99:0,533,7392	0/0:158,0:158:99:0,476,6598	0/0:155,0:155:99:0,467,6473	0/0:159,0:159:99:0,479,6640	0/0:167,0:167:99:0,503,6974	0/0:55,0:55:99:0,166,2297	0/0:152,0:152:99:0,458,6348
gi|293339394|gb|GU595196.1|	109799	.	C	T	2485.04	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.468;DP=2901;Dels=0.00;FS=14.286;HRun=0;HaplotypeScore=2.9044;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.611;QD=40.74;ReadPosRankSum=2.766;SB=-835.23	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:145,0:145:99:0,436,6055	0/0:77,0:77:99:0,232,3216	1/1:0,61:61:99:2547,184,0	0/0:87,0:87:99:0,262,3633	0/0:64,0:64:99:0,193,2673	0/0:98,0:98:99:0,295,4093	0/0:149,0:149:99:0,448,6222	0/0:170,0:170:99:0,512,7099	0/0:152,0:152:99:0,458,6348	0/0:164,0:164:99:0,494,6849	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	0/0:204,0:204:99:0,614,8519	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	0/0:152,0:152:99:0,458,6348	0/0:160,0:160:99:0,482,6682	0/0:168,0:168:99:0,506,7016	0/0:53,0:53:99:0,160,2213	0/0:149,0:149:99:0,448,6222
gi|293339394|gb|GU595196.1|	109814	.	C	A	2860.88	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.850;DP=2944;Dels=0.00;FS=34.272;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.517;QD=40.87;ReadPosRankSum=1.440;SB=-751.70	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:138,0:138:99:0,415,5763	1/1:0,70:70:99:2923,211,0	0/0:77,0:77:99:0,232,3216	0/0:95,0:95:99:0,286,3967	0/0:71,0:71:99:0,214,2965	0/0:109,0:109:99:0,328,4552	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:156,0:156:99:0,470,6515	0/0:160,0:160:99:0,482,6682	0/0:181,0:181:99:0,545,7559	0/0:175,0:175:99:0,527,7308	0/0:204,0:204:99:0,614,8519	0/0:172,0:172:99:0,518,7183	0/0:155,0:155:99:0,467,6473	0/0:138,0:138:99:0,415,5763	0/0:156,0:156:99:0,470,6515	0/0:171,0:171:99:0,515,7141	0/0:59,0:59:99:0,178,2464	0/0:150,0:150:99:0,452,6264
gi|293339394|gb|GU595196.1|	109836	.	G	T	1566.31	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.151;DP=2905;Dels=0.00;FS=32.819;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.338;QD=40.16;ReadPosRankSum=-0.382;SB=-334.10	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:133,0:133:99:0,400,5554	0/0:70,0:70:99:0,211,2923	1/1:0,39:39:99:1629,117,0	0/0:91,0:91:99:0,274,3800	0/0:80,0:80:99:0,241,3341	0/0:123,0:123:99:0,370,5137	0/0:165,0:165:99:0,497,6890	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:180,0:180:99:0,542,7517	0/0:199,0:199:99:0,599,8310	0/0:173,0:173:99:0,521,7225	0/0:151,0:151:99:0,455,6306	0/0:154,0:154:99:0,464,6431	0/0:174,0:174:99:0,524,7266	0/0:156,0:156:99:0,470,6515	0/0:55,0:55:99:0,166,2297	0/0:153,0:153:99:0,461,6389
gi|293339394|gb|GU595196.1|	109856	.	A	G	2986.17	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.494;DP=2867;Dels=0.00;FS=96.267;HRun=0;HaplotypeScore=3.6662;InbreedingCoeff=0.9920;MQ=254.00;MQ0=0;MQRankSum=0.109;QD=40.91;ReadPosRankSum=0.300;SB=-417.57	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:149,0:149:99:0,448,6222	1/1:0,73:73:99:3049,220,0	0/0:6,0:6:18.06:0,18,251	0/0:89,0:89:99:0,268,3717	0/0:84,0:84:99:0,253,3508	0/0:140,0:140:99:0,421,5846	0/0:153,0:153:99:0,461,6389	0/0:153,0:153:99:0,461,6389	0/0:174,0:174:99:0,524,7266	0/0:173,0:173:99:0,521,7225	0/0:155,0:155:99:0,467,6473	0/0:183,0:183:99:0,551,7642	0/0:182,0:182:99:0,548,7600	0/0:160,0:160:99:0,482,6682	0/0:133,0:133:99:0,400,5554	0/0:162,0:162:99:0,488,6765	0/0:154,0:154:99:0,464,6431	0/0:165,0:165:99:0,497,6890	0/0:67,0:67:99:0,202,2798	0/0:160,0:160:99:0,482,6682
gi|293339394|gb|GU595196.1|	109858	.	G	C	112.57	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.343;DP=2880;Dels=0.00;FS=2.040;HRun=1;HaplotypeScore=12.5221;InbreedingCoeff=0.9682;MQ=254.00;MQ0=0;MQRankSum=-1.665;QD=28.14;ReadPosRankSum=-3.195;SB=-39.14	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:153,0:153:99:0,461,6389	0/0:74,0:74:99:0,223,3090	1/1:0,4:4:12.04:167,12,0	0/0:93,0:93:99:0,280,3884	0/0:80,0:80:99:0,241,3341	0/0:141,0:141:99:0,424,5888	0/0:153,0:153:99:0,461,6389	0/0:153,0:153:99:0,461,6389	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:156,0:156:99:0,470,6515	0/0:179,0:179:99:0,539,7475	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:136,0:136:99:0,409,5679	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	0/0:162,0:162:99:0,488,6765	0/0:67,0:67:99:0,202,2798	0/0:160,0:160:99:0,482,6682
gi|293339394|gb|GU595196.1|	109860	.	A	C	34.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.351;DP=2881;Dels=0.00;FS=3.008;HRun=1;HaplotypeScore=12.7126;InbreedingCoeff=0.8839;MQ=254.00;MQ0=0;MQRankSum=0.205;QD=17.25;ReadPosRankSum=-2.391;SB=-0.02	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:153,0:153:99:0,461,6389	0/0:73,0:73:99:0,220,3049	1/1:0,2:2:6.02:84,6,0	0/0:92,0:92:99:0,277,3842	0/0:79,0:79:99:0,238,3299	0/0:140,0:140:99:0,421,5846	0/0:152,0:152:99:0,458,6348	0/0:154,0:154:99:0,464,6431	0/0:169,0:169:99:0,509,7057	0/0:183,0:183:99:0,551,7642	0/0:158,0:158:99:0,476,6598	0/0:180,0:180:99:0,542,7517	0/0:179,0:179:99:0,539,7475	0/0:158,0:158:99:0,476,6598	0/0:136,0:136:99:0,409,5679	0/0:172,0:172:99:0,518,7183	0/0:161,0:161:99:0,485,6723	0/0:156,0:156:99:0,470,6515	0/0:65,0:65:99:0,196,2714	0/0:158,0:158:99:0,476,6598
gi|293339394|gb|GU595196.1|	109865	.	T	C	23177	.	AC=12;AF=0.286;AN=42;BaseQRankSum=1.093;DP=2896;Dels=0.00;FS=56.553;HRun=1;HaplotypeScore=14.2838;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.641;QD=41.76;ReadPosRankSum=-0.018;SB=-9062.00	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:158,0:158:99:0,476,6598	1/1:0,78:78:99:3257,235,0	1/1:0,11:11:33.11:459,33,0	1/1:0,86:86:99:3591,259,0	1/1:0,77:77:99:3216,232,0	1/1:0,146:146:99:6097,439,0	0/0:158,0:158:99:0,476,6598	0/0:147,0:147:99:0,442,6139	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:159,0:159:99:0,479,6640	0/0:176,0:176:99:0,530,7350	0/0:178,0:178:99:0,536,7433	0/0:153,0:153:99:0,461,6389	0/0:141,0:141:99:0,424,5888	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:68,0:68:99:0,205,2840	1/1:0,157:157:99:6556,473,0
gi|293339394|gb|GU595196.1|	109868	.	G	C	12486.36	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.669;DP=2911;Dels=0.00;FS=12.950;HRun=0;HaplotypeScore=11.2842;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.764;QD=41.76;ReadPosRankSum=1.664;SB=-5345.34	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:167,0:167:99:0,503,6974	0/0:72,0:72:99:0,217,3007	0/0:14,0:14:42.14:0,42,585	1/1:0,89:89:99:3717,268,0	1/1:0,74:74:99:3090,223,0	1/1:0,136:136:99:5679,409,0	0/0:164,0:164:99:0,494,6849	0/0:148,0:148:99:0,445,6181	0/0:164,0:164:99:0,494,6849	0/0:172,0:172:99:0,518,7183	0/0:164,0:164:99:0,494,6849	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	0/0:158,0:158:99:0,476,6598	0/0:134,0:134:99:0,403,5596	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:71,0:71:99:0,214,2965	0/0:172,0:172:99:0,518,7183
gi|293339394|gb|GU595196.1|	109914	.	T	C	9229.05	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.474;DP=3070;Dels=0.00;FS=6.275;HRun=0;HaplotypeScore=2.4282;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.168;QD=41.76;ReadPosRankSum=-1.613;SB=-4426.61	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:182,0:182:99:0,548,7600	0/0:69,0:69:99:0,208,2881	0/0:38,0:38:99:0,114,1587	0/0:83,0:83:99:0,250,3466	0/0:97,0:97:99:0,292,4051	0/0:148,0:148:99:0,445,6181	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:172,0:172:99:0,518,7183	0/0:141,0:141:99:0,424,5888	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:158,0:158:99:0,476,6598	0/0:177,0:177:99:0,533,7392	0/0:154,0:154:99:0,464,6431	0/0:69,0:69:99:0,208,2881	1/1:0,221:221:99:9229,665,0
gi|293339394|gb|GU595196.1|	109922	.	A	C	2067.44	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.471;DP=3073;Dels=0.00;FS=3.177;HRun=1;HaplotypeScore=2.4282;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.068;QD=40.54;ReadPosRankSum=1.683;SB=-918.75	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:176,0:176:99:0,530,7350	0/0:71,0:71:99:0,214,2965	0/0:33,0:33:99:0,99,1378	0/0:77,0:77:99:0,232,3216	0/0:104,0:104:99:0,313,4343	0/0:157,0:157:99:0,473,6556	0/0:186,0:186:99:0,560,7767	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:153,0:153:99:0,461,6389	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	0/0:187,0:187:99:0,563,7809	0/0:166,0:166:99:0,500,6932	0/0:179,0:179:99:0,539,7475	0/0:146,0:146:99:0,439,6097	0/0:172,0:172:99:0,518,7183	0/0:147,0:147:99:0,442,6139	1/1:0,51:51:99:2130,154,0	0/0:212,0:212:99:0,638,8853
gi|293339394|gb|GU595196.1|	109941	.	C	T	1858.63	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.031;DP=3055;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.769;QD=40.41;ReadPosRankSum=-2.691;SB=-960.50	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:173,0:173:99:0,521,7225	0/0:79,0:79:99:0,238,3299	0/0:16,0:16:48.16:0,48,668	0/0:78,0:78:99:0,235,3257	0/0:111,0:111:99:0,334,4635	0/0:156,0:156:99:0,470,6515	0/0:191,0:191:99:0,575,7976	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	0/0:180,0:180:99:0,542,7517	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:139,0:139:99:0,418,5805	0/0:181,0:181:99:0,545,7559	0/0:172,0:172:99:0,518,7183	1/1:0,46:46:99:1921,138,0	0/0:201,0:201:99:0,605,8394
gi|293339394|gb|GU595196.1|	109961	.	T	C	4844.22	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.853;DP=3082;Dels=0.00;FS=29.152;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9781;MQ=254.00;MQ0=0;MQRankSum=0.494;QD=41.76;ReadPosRankSum=0.680;SB=-1707.49	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:181,0:181:99:0,545,7559	1/1:0,69:69:99:2881,208,0	1/1:0,3:3:9.03:125,9,0	0/0:80,0:80:99:0,241,3341	0/0:120,0:120:99:0,361,5011	0/0:149,0:149:99:0,448,6222	0/0:181,0:181:99:0,545,7559	0/0:159,0:159:99:0,479,6640	0/0:160,0:160:99:0,482,6682	0/0:175,0:175:99:0,527,7308	0/0:161,0:161:99:0,485,6723	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:186,0:186:99:0,560,7767	1/1:0,44:44:99:1837,132,0	0/0:213,0:213:99:0,641,8895
gi|293339394|gb|GU595196.1|	109981	.	C	G	272.95	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.541;DP=3016;Dels=0.00;FS=1.388;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9980;MQ=254.00;MQ0=0;MQRankSum=-0.647;QD=34.12;ReadPosRankSum=-1.093;SB=-120.99	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:154,0:154:99:0,464,6431	0/0:64,0:64:99:0,193,2673	1/1:0,8:8:24.08:334,24,0	0/0:83,0:83:99:0,250,3466	0/0:116,0:116:99:0,349,4844	0/0:161,0:161:99:0,485,6723	0/0:149,0:149:99:0,448,6222	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	0/0:184,0:184:99:0,554,7684	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:185,0:185:99:0,557,7726	0/0:51,0:51:99:0,154,2130	0/0:208,0:208:99:0,626,8686
gi|293339394|gb|GU595196.1|	109994	.	C	T	898.15	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.318;DP=3046;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.302;QD=39.05;ReadPosRankSum=-0.446;SB=-459.30	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:156,0:156:99:0,470,6515	0/0:75,0:75:99:0,226,3132	1/1:0,23:23:69.23:960,69,0	0/0:88,0:88:99:0,265,3675	0/0:100,0:100:99:0,301,4176	0/0:158,0:158:99:0,476,6598	0/0:146,0:146:99:0,439,6097	0/0:171,0:171:99:0,515,7141	0/0:156,0:156:99:0,470,6515	0/0:175,0:175:99:0,527,7308	0/0:177,0:177:99:0,533,7392	0/0:187,0:187:99:0,563,7809	0/0:165,0:165:99:0,497,6890	0/0:162,0:162:99:0,488,6765	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	0/0:181,0:181:99:0,545,7559	0/0:167,0:167:99:0,503,6974	0/0:55,0:55:99:0,166,2297	0/0:211,0:211:99:0,635,8811
gi|293339394|gb|GU595196.1|	110018	.	C	T	16954.71	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.536;DP=2811;Dels=0.00;FS=43.523;HRun=0;HaplotypeScore=2.3330;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.218;QD=41.76;ReadPosRankSum=-0.787;SB=-6848.71	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:184,0:184:99:0,554,7684	1/1:0,75:75:99:3132,226,0	0/0:57,0:57:99:0,172,2380	1/1:0,49:49:99:2046,147,0	1/1:0,45:45:99:1879,135,0	1/1:0,88:88:99:3675,265,0	0/0:159,0:159:99:0,479,6640	0/0:164,0:164:99:0,494,6849	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:164,0:164:99:0,494,6849	0/0:159,0:159:99:0,479,6640	0/0:161,0:161:99:0,485,6723	0/0:160,0:160:99:0,482,6682	0/0:164,0:164:99:0,494,6849	0/0:189,0:189:99:0,569,7893	1/1:0,55:55:99:2297,166,0	1/1:0,94:94:99:3925,283,0
gi|293339394|gb|GU595196.1|	110027	.	G	C,T	18082.24	.	AC=2,12;AF=0.048,0.286;AN=42;BaseQRankSum=-1.782;DP=2787;Dels=0.00;FS=29.479;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.269;QD=41.76;ReadPosRankSum=-8.098;SB=-7433.36	GT:AD:DP:GQ:PL	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	2/2:0,0,81:81:99:3383,3383,3383,244,244,0	1/1:0,65,0:65:99:2714,196,0,2714,196,2714	2/2:0,0,41:41:99:1712,1712,1712,123,123,0	2/2:0,0,41:41:99:1712,1712,1712,123,123,0	2/2:0,0,78:78:99:3257,3257,3257,235,235,0	0/0:162,0,0:162:99:0,488,6765,488,6765,6765	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	0/0:170,0,0:170:99:0,512,7099,512,7099,7099	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	0/0:162,0,0:162:99:0,488,6765,488,6765,6765	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	0/0:160,0,0:160:99:0,482,6682,482,6682,6682	0/0:160,0,0:160:99:0,482,6682,482,6682,6682	0/0:184,0,0:184:99:0,554,7684,554,7684,7684	2/2:0,0,64:64:99:2673,2673,2673,193,193,0	2/2:0,0,63:63:99:2631,2631,2631,190,190,0
gi|293339394|gb|GU595196.1|	110042	.	G	A	10147.78	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.002;DP=2856;Dels=0.00;FS=7.451;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.433;QD=41.76;ReadPosRankSum=-3.553;SB=-4593.66	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:182,0:182:99:0,548,7600	0/0:89,0:89:99:0,268,3717	0/0:78,0:78:99:0,235,3257	1/1:0,36:36:99:1503,108,0	1/1:0,54:54:99:2255,163,0	1/1:0,92:92:99:3842,277,0	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:182,0:182:99:0,548,7600	0/0:177,0:177:99:0,533,7392	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:156,0:156:99:0,470,6515	0/0:150,0:150:99:0,452,6264	0/0:194,0:194:99:0,584,8102	0/0:64,0:64:99:0,193,2673	1/1:0,61:61:99:2547,184,0
gi|293339394|gb|GU595196.1|	110069	.	G	A	7308.08	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.222;DP=3262;Dels=0.00;FS=10.605;HRun=0;HaplotypeScore=3.6662;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.938;QD=41.76;ReadPosRankSum=3.460;SB=-3048.52	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:173,0:173:99:0,521,7225	0/0:115,0:115:99:0,346,4802	0/0:91,0:91:99:0,274,3800	0/0:91,0:91:99:0,274,3800	0/0:99,0:99:99:0,298,4134	0/0:181,0:181:99:0,545,7559	0/0:160,0:160:99:0,482,6682	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:186,0:186:99:0,560,7767	0/0:186,0:186:99:0,560,7767	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	0/0:156,0:156:99:0,470,6515	0/0:176,0:176:99:0,530,7350	0/0:85,0:85:99:0,256,3550	1/1:0,175:175:99:7308,527,0
gi|293339394|gb|GU595196.1|	110078	.	T	C	3153.20	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.597;DP=3277;Dels=0.00;FS=1.370;HRun=0;HaplotypeScore=11.9032;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.649;QD=40.95;ReadPosRankSum=3.481;SB=-1586.91	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:185,0:185:99:0,557,7726	0/0:125,0:125:99:0,376,5220	1/1:0,77:77:99:3216,232,0	0/0:98,0:98:99:0,295,4093	0/0:108,0:108:99:0,325,4510	0/0:181,0:181:99:0,545,7559	0/0:154,0:154:99:0,464,6431	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:164,0:164:99:0,494,6849	0/0:191,0:191:99:0,575,7976	0/0:190,0:190:99:0,572,7934	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:179,0:179:99:0,539,7475	0/0:156,0:156:99:0,470,6515	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:85,0:85:99:0,256,3550	0/0:203,0:203:99:0,611,8477
gi|293339394|gb|GU595196.1|	110081	.	C	G	8644.41	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.263;DP=3240;Dels=0.00;FS=23.032;HRun=2;HaplotypeScore=3.5233;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.029;QD=41.76;ReadPosRankSum=1.088;SB=-3382.61	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:191,0:191:99:0,575,7976	1/1:0,124:124:99:5178,373,0	0/0:74,0:74:99:0,223,3090	0/0:94,0:94:99:0,283,3925	0/0:99,0:99:99:0,298,4134	0/0:174,0:174:99:0,524,7266	0/0:153,0:153:99:0,461,6389	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:190,0:190:99:0,572,7934	0/0:188,0:188:99:0,566,7851	0/0:164,0:164:99:0,494,6849	0/0:154,0:154:99:0,464,6431	0/0:181,0:181:99:0,545,7559	0/0:156,0:156:99:0,470,6515	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	1/1:0,83:83:99:3466,250,0	0/0:207,0:207:99:0,623,8644
gi|293339394|gb|GU595196.1|	110105	.	C	G	1232.23	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.273;DP=3083;Dels=0.00;FS=3.262;HRun=0;HaplotypeScore=1.4760;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.899;QD=39.75;ReadPosRankSum=-5.583;SB=-542.90	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:181,0:181:99:0,545,7559	0/0:121,0:121:99:0,364,5053	1/1:0,31:31:93.31:1295,93,0	0/0:103,0:103:99:0,310,4301	0/0:106,0:106:99:0,319,4427	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:148,0:148:99:0,445,6181	0/0:170,0:170:99:0,512,7099	0/0:140,0:140:99:0,421,5846	0/0:177,0:177:99:0,533,7392	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:155,0:155:99:0,467,6473	0/0:164,0:164:99:0,494,6849	0/0:135,0:135:99:0,406,5638	0/0:64,0:64:99:0,193,2673	0/0:190,0:190:99:0,572,7934
gi|293339394|gb|GU595196.1|	110111	.	T	C	30693.86	.	AC=12;AF=0.286;AN=42;BaseQRankSum=0.940;DP=3087;Dels=0.00;FS=5.080;HRun=1;HaplotypeScore=0.6666;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.124;QD=41.76;ReadPosRankSum=1.330;SB=-14574.35	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:181,0:181:99:0,545,7559	1/1:0,124:124:99:5178,373,0	0/0:14,0:14:42.14:0,42,585	1/1:0,97:97:99:4051,292,0	1/1:0,107:107:99:4468,322,0	1/1:0,157:157:99:6556,473,0	0/0:179,0:179:99:0,539,7475	0/0:143,0:143:99:0,430,5972	0/0:177,0:177:99:0,533,7392	0/0:146,0:146:99:0,439,6097	0/0:180,0:180:99:0,542,7517	0/0:185,0:185:99:0,557,7726	0/0:177,0:177:99:0,533,7392	0/0:178,0:178:99:0,536,7433	0/0:163,0:163:99:0,491,6807	0/0:157,0:157:99:0,473,6556	0/0:177,0:177:99:0,533,7392	0/0:134,0:134:99:0,403,5596	1/1:0,58:58:99:2422,175,0	1/1:0,192:192:99:8018,578,0
gi|293339394|gb|GU595196.1|	110129	.	G	A	22174.76	.	AC=8;AF=0.200;AN=40;BaseQRankSum=-0.408;DP=3054;Dels=0.00;FS=2.466;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.716;QD=41.76;ReadPosRankSum=-0.989;SB=-10815.95	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	0/0:117,0:117:99:0,352,4886	./.	1/1:0,72:72:99:3007,217,0	1/1:0,111:111:99:4635,334,0	1/1:0,150:150:99:6264,452,0	0/0:191,0:191:99:0,575,7976	0/0:158,0:158:99:0,476,6598	0/0:165,0:165:99:0,497,6890	0/0:148,0:148:99:0,445,6181	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:184,0:184:99:0,554,7684	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:192,0:192:99:0,578,8018	0/0:139,0:139:99:0,418,5805	0/0:63,0:63:99:0,190,2631	1/1:0,198:198:99:8269,596,0
gi|293339394|gb|GU595196.1|	110173	.	T	C	5345.34	.	AC=4;AF=0.100;AN=40;BaseQRankSum=0.436;DP=3024;Dels=0.00;FS=6.863;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.164;QD=41.76;ReadPosRankSum=2.719;SB=-2380.36	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:163,0:163:99:0,491,6807	1/1:0,82:82:99:3424,247,0	./.	0/0:60,0:60:99:0,181,2506	0/0:77,0:77:99:0,232,3216	0/0:119,0:119:99:0,358,4969	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:180,0:180:99:0,542,7517	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:186,0:186:99:0,560,7767	0/0:170,0:170:99:0,512,7099	0/0:154,0:154:99:0,464,6431	0/0:173,0:173:99:0,521,7225	0/0:199,0:199:99:0,599,8310	0/0:194,0:194:99:0,584,8102	1/1:0,46:46:99:1921,138,0	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	110186	.	A	G	7141.04	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.409;DP=2950;Dels=0.00;FS=5.679;HRun=2;HaplotypeScore=1.0999;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.332;QD=41.76;ReadPosRankSum=1.024;SB=-3340.85	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:181,0:181:99:0,545,7559	0/0:47,0:47:99:0,141,1963	./.	0/0:51,0:51:99:0,154,2130	0/0:74,0:74:99:0,223,3090	0/0:107,0:107:99:0,322,4468	0/0:173,0:173:99:0,521,7225	0/0:179,0:179:99:0,539,7475	0/0:165,0:165:99:0,497,6890	0/0:180,0:180:99:0,542,7517	0/0:178,0:178:99:0,536,7433	0/0:176,0:176:99:0,530,7350	0/0:186,0:186:99:0,560,7767	0/0:160,0:160:99:0,482,6682	0/0:154,0:154:99:0,464,6431	0/0:175,0:175:99:0,527,7308	0/0:193,0:193:99:0,581,8060	0/0:184,0:184:99:0,554,7684	0/0:28,0:28:84.28:0,84,1169	1/1:0,171:171:99:7141,515,0
gi|293339394|gb|GU595196.1|	110196	.	T	C	835.60	.	AC=4;AF=0.100;AN=40;BaseQRankSum=-0.180;DP=2845;Dels=0.00;FS=2.815;HRun=2;HaplotypeScore=1.0999;InbreedingCoeff=0.9915;MQ=254.00;MQ0=0;MQRankSum=0.617;QD=37.98;ReadPosRankSum=-7.150;SB=-369.72	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:185,0:185:99:0,557,7726	1/1:0,17:17:51.17:710,51,0	./.	0/0:49,0:49:99:0,147,2046	0/0:64,0:64:99:0,193,2673	0/0:98,0:98:99:0,295,4093	0/0:152,0:152:99:0,458,6348	0/0:179,0:179:99:0,539,7475	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:193,0:193:99:0,581,8060	0/0:168,0:168:99:0,506,7016	0/0:147,0:147:99:0,442,6139	0/0:184,0:184:99:0,554,7684	0/0:194,0:194:99:0,584,8102	0/0:185,0:185:99:0,557,7726	1/1:0,5:5:15.05:209,15,0	0/0:152,0:152:99:0,458,6348
gi|293339394|gb|GU595196.1|	110229	.	G	T	34.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.187;DP=2757;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.1905;InbreedingCoeff=0.8819;MQ=254.00;MQ0=0;MQRankSum=-1.213;QD=17.25;ReadPosRankSum=-2.394;SB=-38.85	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:19,0:19:57.19:0,57,793	1/1:0,2:2:6.02:84,6,0	0/0:58,0:58:99:0,175,2422	0/0:64,0:64:99:0,193,2673	0/0:92,0:92:99:0,277,3842	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:180,0:180:99:0,542,7517	0/0:163,0:163:99:0,491,6807	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:197,0:197:99:0,593,8227	0/0:191,0:191:99:0,575,7976	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:182,0:182:99:0,548,7600	0/0:8,0:8:24.08:0,24,334	0/0:112,0:112:99:0,337,4677
gi|293339394|gb|GU595196.1|	110232	.	C	T	1500.46	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.373;DP=2731;Dels=0.00;FS=13.005;HRun=0;HaplotypeScore=0.4285;InbreedingCoeff=0.9977;MQ=254.00;MQ0=0;MQRankSum=0.634;QD=39.49;ReadPosRankSum=-5.887;SB=-499.70	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:171,0:171:99:0,515,7141	1/1:0,27:27:81.27:1128,81,0	0/0:7,0:7:21.07:0,21,292	0/0:58,0:58:99:0,175,2422	0/0:61,0:61:99:0,184,2547	0/0:84,0:84:99:0,253,3508	0/0:172,0:172:99:0,518,7183	0/0:151,0:151:99:0,455,6306	0/0:180,0:180:99:0,542,7517	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	0/0:154,0:154:99:0,464,6431	0/0:197,0:197:99:0,593,8227	0/0:187,0:187:99:0,563,7809	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:177,0:177:99:0,533,7392	1/1:0,11:11:33.11:459,33,0	0/0:107,0:107:99:0,322,4468
gi|293339394|gb|GU595196.1|	110237	.	C	G	564.07	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.237;DP=2755;Dels=0.00;FS=5.125;HRun=3;HaplotypeScore=0.8094;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.860;QD=37.60;ReadPosRankSum=-4.237;SB=-208.50	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:170,0:170:99:0,512,7099	0/0:39,0:39:99:0,117,1629	1/1:0,15:15:45.15:626,45,0	0/0:59,0:59:99:0,178,2464	0/0:58,0:58:99:0,175,2422	0/0:86,0:86:99:0,259,3591	0/0:175,0:175:99:0,527,7308	0/0:146,0:146:99:0,439,6097	0/0:168,0:168:99:0,506,7016	0/0:163,0:163:99:0,491,6807	0/0:171,0:171:99:0,515,7141	0/0:156,0:156:99:0,470,6515	0/0:203,0:203:99:0,611,8477	0/0:197,0:197:99:0,593,8227	0/0:159,0:159:99:0,479,6640	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:177,0:177:99:0,533,7392	0/0:17,0:17:51.17:0,51,710	0/0:104,0:104:99:0,313,4343
gi|293339394|gb|GU595196.1|	110250	.	C	T	8602.65	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.622;DP=2813;Dels=0.00;FS=72.127;HRun=1;HaplotypeScore=8.7607;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.981;QD=41.76;ReadPosRankSum=-0.163;SB=-2463.88	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:170,0:170:99:0,512,7099	0/0:61,0:61:99:0,184,2547	0/0:34,0:34:99:0,102,1420	1/1:0,59:59:99:2464,178,0	1/1:0,59:59:99:2464,178,0	1/1:0,88:88:99:3675,265,0	0/0:192,0:192:99:0,578,8018	0/0:163,0:163:99:0,491,6807	0/0:161,0:161:99:0,485,6723	0/0:155,0:155:99:0,467,6473	0/0:189,0:189:99:0,569,7893	0/0:159,0:159:99:0,479,6640	0/0:192,0:192:99:0,578,8018	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:157,0:157:99:0,473,6556	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:26,0:26:78.26:0,78,1086	0/0:108,0:108:99:0,325,4510
gi|293339394|gb|GU595196.1|	110254	.	T	C	8310.33	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.527;DP=2806;Dels=0.00;FS=58.720;HRun=0;HaplotypeScore=8.9036;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.035;QD=41.76;ReadPosRankSum=3.576;SB=-2463.88	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:171,0:171:99:0,515,7141	1/1:0,67:67:99:2798,202,0	0/0:36,0:36:99:0,108,1503	0/0:57,0:57:99:0,172,2380	0/0:58,0:58:99:0,175,2422	0/0:84,0:84:99:0,253,3508	0/0:191,0:191:99:0,575,7976	0/0:161,0:161:99:0,485,6723	0/0:152,0:152:99:0,458,6348	0/0:153,0:153:99:0,461,6389	0/0:182,0:182:99:0,548,7600	0/0:162,0:162:99:0,488,6765	0/0:191,0:191:99:0,575,7976	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	0/0:165,0:165:99:0,497,6890	1/1:0,32:32:96.32:1336,96,0	1/1:0,100:100:99:4176,301,0
gi|293339394|gb|GU595196.1|	110300	.	G	A	14031.49	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.671;DP=2945;Dels=0.00;FS=89.084;HRun=0;HaplotypeScore=8.2846;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.499;QD=41.76;ReadPosRankSum=0.916;SB=-4551.90	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:176,0:176:99:0,530,7350	0/0:73,0:73:99:0,220,3049	0/0:66,0:66:99:0,199,2756	1/1:0,46:46:99:1921,138,0	1/1:0,74:74:99:3090,223,0	1/1:0,93:93:99:3884,280,0	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:180,0:180:99:0,542,7517	0/0:146,0:146:99:0,439,6097	0/0:183,0:183:99:0,551,7642	0/0:189,0:189:99:0,569,7893	0/0:171,0:171:99:0,515,7141	0/0:183,0:183:99:0,551,7642	0/0:169,0:169:99:0,509,7057	0/0:66,0:66:99:0,199,2756	1/1:0,123:123:99:5137,370,0
gi|293339394|gb|GU595196.1|	110307	.	G	A	15534.86	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.071;DP=2959;Dels=0.00;FS=112.151;HRun=0;HaplotypeScore=9.5225;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.986;QD=41.76;ReadPosRankSum=-1.246;SB=-4969.50	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:72,0:72:99:0,217,3007	0/0:68,0:68:99:0,205,2840	1/1:0,53:53:99:2213,160,0	1/1:0,83:83:99:3466,250,0	1/1:0,97:97:99:4051,292,0	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:152,0:152:99:0,458,6348	0/0:177,0:177:99:0,533,7392	0/0:174,0:174:99:0,524,7266	0/0:181,0:181:99:0,545,7559	0/0:142,0:142:99:0,427,5930	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:163,0:163:99:0,491,6807	0/0:182,0:182:99:0,548,7600	0/0:170,0:170:99:0,512,7099	0/0:68,0:68:99:0,205,2840	1/1:0,139:139:99:5805,418,0
gi|293339394|gb|GU595196.1|	110309	.	G	A	8644.41	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.881;DP=2983;Dels=0.00;FS=15.927;HRun=0;HaplotypeScore=9.8558;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.332;QD=41.76;ReadPosRankSum=0.544;SB=-3549.65	GT:AD:DP:GQ:PL	0/0:182,0:182:99:0,548,7600	0/0:183,0:183:99:0,551,7642	1/1:0,72:72:99:3007,217,0	1/1:0,65:65:99:2714,196,0	0/0:54,0:54:99:0,163,2255	0/0:85,0:85:99:0,256,3550	0/0:97,0:97:99:0,292,4051	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:150,0:150:99:0,452,6264	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:184,0:184:99:0,554,7684	0/0:148,0:148:99:0,445,6181	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	1/1:0,70:70:99:2923,211,0	0/0:148,0:148:99:0,445,6181
gi|293339394|gb|GU595196.1|	110352	.	G	T	2234.48	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.669;DP=3208;Dels=0.00;FS=83.286;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.295;QD=40.63;ReadPosRankSum=1.634;SB=-292.34	GT:AD:DP:GQ:PL	0/0:187,0:187:99:0,563,7809	0/0:169,0:169:99:0,509,7057	0/0:97,0:97:99:0,292,4051	1/1:0,55:55:99:2297,166,0	0/0:81,0:81:99:0,244,3383	0/0:84,0:84:99:0,253,3508	0/0:151,0:151:99:0,455,6306	0/0:180,0:180:99:0,542,7517	0/0:183,0:183:99:0,551,7642	0/0:184,0:184:99:0,554,7684	0/0:178,0:178:99:0,536,7433	0/0:190,0:190:99:0,572,7934	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:183,0:183:99:0,551,7642	0/0:171,0:171:99:0,515,7141	0/0:192,0:192:99:0,578,8018	0/0:178,0:178:99:0,536,7433	0/0:171,0:171:99:0,515,7141	0/0:53,0:53:99:0,160,2213	0/0:192,0:192:99:0,578,8018
gi|293339394|gb|GU595196.1|	110375	.	T	C	19961.46	.	AC=10;AF=0.238;AN=42;BaseQRankSum=1.303;DP=3098;Dels=0.00;FS=3.704;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.888;QD=41.76;ReadPosRankSum=5.962;SB=-9810.87	GT:AD:DP:GQ:PL	0/0:186,0:186:99:0,560,7767	0/0:168,0:168:99:0,506,7016	0/0:98,0:98:99:0,295,4093	1/1:0,48:48:99:2004,144,0	1/1:0,66:66:99:2756,199,0	1/1:0,78:78:99:3257,235,0	1/1:0,126:126:99:5262,379,0	0/0:168,0:168:99:0,506,7016	0/0:185,0:185:99:0,557,7726	0/0:161,0:161:99:0,485,6723	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:185,0:185:99:0,557,7726	0/0:201,0:201:99:0,605,8394	0/0:195,0:195:99:0,587,8143	0/0:194,0:194:99:0,584,8102	0/0:158,0:158:99:0,476,6598	0/0:55,0:55:99:0,166,2297	1/1:0,160:160:99:6682,482,0
gi|293339394|gb|GU595196.1|	110393	.	A	G	22550.60	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.088;DP=2969;Dels=0.00;FS=39.460;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.033;QD=41.76;ReadPosRankSum=-2.711;SB=-9270.81	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:160,0:160:99:0,482,6682	1/1:0,94:94:99:3925,283,0	1/1:0,68:68:99:2840,205,0	1/1:0,42:42:99:1754,126,0	1/1:0,44:44:99:1837,132,0	1/1:0,74:74:99:3090,223,0	0/0:152,0:152:99:0,458,6348	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:179,0:179:99:0,539,7475	0/0:178,0:178:99:0,536,7433	0/0:175,0:175:99:0,527,7308	0/0:187,0:187:99:0,563,7809	0/0:198,0:198:99:0,596,8269	0/0:174,0:174:99:0,524,7266	0/0:182,0:182:99:0,548,7600	0/0:170,0:170:99:0,512,7099	1/1:0,53:53:99:2213,160,0	1/1:0,165:165:99:6890,497,0
gi|293339394|gb|GU595196.1|	110416	.	T	C	15075.50	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.307;DP=2804;Dels=0.00;FS=53.367;HRun=1;HaplotypeScore=2.9044;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.090;QD=41.76;ReadPosRankSum=10.254;SB=-5637.30	GT:AD:DP:GQ:PL	0/0:191,0:191:99:0,575,7976	0/0:166,0:166:99:0,500,6932	1/1:0,82:82:99:3424,247,0	1/1:0,62:62:99:2589,187,0	1/1:0,12:12:36.12:501,36,0	1/1:0,23:23:69.23:960,69,0	1/1:0,26:26:78.26:1086,78,0	0/0:145,0:145:99:0,436,6055	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/0:208,0:208:99:0,626,8686	0/0:179,0:179:99:0,539,7475	0/0:184,0:184:99:0,554,7684	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:188,0:188:99:0,566,7851	1/1:0,41:41:99:1712,123,0	1/1:0,115:115:99:4802,346,0
gi|293339394|gb|GU595196.1|	110417	.	C	A	2442.44	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.920;DP=2806;Dels=0.00;FS=0.990;HRun=0;HaplotypeScore=2.9044;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.352;QD=40.04;ReadPosRankSum=7.207;SB=-1251.87	GT:AD:DP:GQ:PL	0/0:192,0:192:99:0,578,8018	0/0:166,0:166:99:0,500,6932	0/0:81,0:81:99:0,244,3383	0/0:62,0:62:99:0,187,2589	1/1:0,12:12:36.12:501,36,0	1/1:0,23:23:69.23:960,69,0	1/1:0,26:26:78.26:1086,78,0	0/0:146,0:146:99:0,439,6097	0/0:169,0:169:99:0,509,7057	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	0/0:172,0:172:99:0,518,7183	0/0:206,0:206:99:0,620,8603	0/0:181,0:181:99:0,545,7559	0/0:189,0:189:99:0,569,7893	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:187,0:187:99:0,563,7809	0/0:40,0:40:99:0,120,1670	0/0:115,0:115:99:0,346,4802
gi|293339394|gb|GU595196.1|	110441	.	G	T	939.91	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.472;DP=2565;Dels=0.00;FS=21.926;HRun=1;HaplotypeScore=0.2857;InbreedingCoeff=0.9998;MQ=254.00;MQ0=0;MQRankSum=0.078;QD=39.16;ReadPosRankSum=-3.958;SB=-208.81	GT:AD:DP:GQ:PL	0/0:199,0:199:99:0,599,8310	0/0:169,0:169:99:0,509,7057	0/0:32,0:32:96.32:0,96,1336	1/1:0,24:24:72.24:1002,72,0	0/0:12,0:12:36.12:0,36,501	0/0:23,0:23:69.23:0,69,960	0/0:26,0:26:78.26:0,78,1086	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:151,0:151:99:0,455,6306	0/0:177,0:177:99:0,533,7392	0/0:183,0:183:99:0,551,7642	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:14,0:14:42.14:0,42,585	0/0:49,0:49:99:0,147,2046
gi|293339394|gb|GU595196.1|	110450	.	G	A	191.93	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.288;DP=2452;Dels=0.00;FS=3.489;HRun=0;HaplotypeScore=0.5237;InbreedingCoeff=0.8367;MQ=254.00;MQ0=0;MQRankSum=1.020;QD=31.99;ReadPosRankSum=-3.554;SB=-78.95	GT:AD:DP:GQ:PL	0/0:212,0:212:99:0,638,8853	0/0:161,0:161:99:0,485,6723	0/0:12,0:12:36.12:0,36,501	0/0:5,0:5:15.05:0,15,209	0/0:2,0:2:6.02:0,6,84	0/0:9,0:9:27.09:0,27,376	0/0:3,0:3:9.03:0,9,125	0/0:169,0:169:99:0,509,7057	0/0:151,0:151:99:0,455,6306	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	0/0:151,0:151:99:0,455,6306	0/0:164,0:164:99:0,494,6849	0/0:181,0:181:99:0,545,7559	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:188,0:188:99:0,566,7851	0/0:173,0:173:99:0,521,7225	1/1:0,6:6:18.06:251,18,0	0/0:14,0:14:42.14:0,42,585
gi|293339394|gb|GU595196.1|	110452	.	A	C	464.16	.	AC=4;AF=0.118;AN=34;BaseQRankSum=-0.566;DP=2403;Dels=0.00;FS=3.797;HRun=1;HaplotypeScore=0.1764;InbreedingCoeff=0.9518;MQ=254.00;MQ0=0;MQRankSum=-0.104;QD=35.70;ReadPosRankSum=-6.130;SB=-204.24	GT:AD:DP:GQ:PL	0/0:206,0:206:99:0,620,8603	0/0:163,0:163:99:0,491,6807	1/1:0,4:4:12.04:167,12,0	./.	./.	./.	./.	0/0:167,0:167:99:0,503,6974	0/0:149,0:149:99:0,448,6222	0/0:172,0:172:99:0,518,7183	0/0:163,0:163:99:0,491,6807	0/0:151,0:151:99:0,455,6306	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	0/0:181,0:181:99:0,545,7559	0/0:192,0:192:99:0,578,8018	0/0:172,0:172:99:0,518,7183	0/0:3,0:3:9.03:0,9,125	1/1:0,9:9:27.09:376,27,0
gi|293339394|gb|GU595196.1|	110506	.	C	A	9354.33	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.437;DP=2667;Dels=0.00;FS=2.392;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.211;QD=41.76;ReadPosRankSum=-10.969;SB=-4551.86	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:166,0:166:99:0,500,6932	1/1:0,38:38:99:1587,114,0	1/1:0,45:45:99:1879,135,0	1/1:0,25:25:75.25:1044,75,0	1/1:0,24:24:72.24:1002,72,0	1/1:0,36:36:99:1503,108,0	0/0:164,0:164:99:0,494,6849	0/0:159,0:159:99:0,479,6640	0/0:179,0:179:99:0,539,7475	0/0:163,0:163:99:0,491,6807	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:212,0:212:99:0,638,8853	0/0:184,0:184:99:0,554,7684	0/0:166,0:166:99:0,500,6932	0/0:185,0:185:99:0,557,7726	1/1:0,18:18:54.18:752,54,0	1/1:0,38:38:99:1587,114,0
gi|293339394|gb|GU595196.1|	110520	.	T	A	19209.77	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.041;DP=2852;Dels=0.00;FS=0.562;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.106;QD=41.76;ReadPosRankSum=2.864;SB=-9563.14	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:163,0:163:99:0,491,6807	1/1:0,74:74:99:3090,223,0	1/1:0,85:85:99:3550,256,0	1/1:0,46:46:99:1921,138,0	1/1:0,45:45:99:1879,135,0	1/1:0,85:85:99:3550,256,0	0/0:146,0:146:99:0,439,6097	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/0:184,0:184:99:0,554,7684	0/0:199,0:199:99:0,599,8310	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	1/1:0,40:40:99:1670,120,0	1/1:0,85:85:99:3550,256,0
gi|293339394|gb|GU595196.1|	110730	.	T	C	31570.83	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.691;DP=3133;Dels=0.00;FS=27.657;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.153;QD=41.76;ReadPosRankSum=0.390;SB=-13530.37	GT:AD:DP:GQ:PL	0/0:143,0:143:99:0,430,5972	0/0:151,0:151:99:0,455,6306	1/1:0,117:117:99:4886,352,0	1/1:0,143:143:99:5972,430,0	1/1:0,63:63:99:2631,190,0	1/1:0,83:83:99:3466,250,0	1/1:0,126:126:99:5262,379,0	0/0:156,0:156:99:0,470,6515	0/0:186,0:186:99:0,560,7767	0/0:182,0:182:99:0,548,7600	0/0:159,0:159:99:0,479,6640	0/0:197,0:197:99:0,593,8227	0/0:183,0:183:99:0,551,7642	0/0:160,0:160:99:0,482,6682	0/0:156,0:156:99:0,470,6515	0/0:183,0:183:99:0,551,7642	0/0:178,0:178:99:0,536,7433	0/0:179,0:179:99:0,539,7475	0/0:164,0:164:99:0,494,6849	1/1:0,81:81:99:3383,244,0	1/1:0,143:143:99:5972,430,0
gi|293339394|gb|GU595196.1|	110798	.	A	G	9604.90	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.291;DP=2839;Dels=0.00;FS=2.703;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.439;QD=41.76;ReadPosRankSum=1.257;SB=-4718.94	GT:AD:DP:GQ:PL	0/0:188,0:188:99:0,566,7851	0/0:171,0:171:99:0,515,7141	0/0:74,0:74:99:0,223,3090	0/0:102,0:102:99:0,307,4260	1/1:0,38:38:99:1587,114,0	1/1:0,70:70:99:2923,211,0	1/1:0,63:63:99:2631,190,0	0/0:160,0:160:99:0,482,6682	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	0/0:167,0:167:99:0,503,6974	0/0:187,0:187:99:0,563,7809	0/0:176,0:176:99:0,530,7350	0/0:187,0:187:99:0,563,7809	0/0:172,0:172:99:0,518,7183	0/0:160,0:160:99:0,482,6682	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:47,0:47:99:0,141,1963	1/1:0,59:59:99:2464,178,0
gi|293339394|gb|GU595196.1|	110809	.	A	C	1315.75	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.046;DP=2650;Dels=0.00;FS=0.646;HRun=0;HaplotypeScore=1.5712;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.453;QD=39.87;ReadPosRankSum=-6.731;SB=-668.18	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:174,0:174:99:0,524,7266	0/0:53,0:53:99:0,160,2213	0/0:69,0:69:99:0,208,2881	0/0:29,0:29:87.29:0,87,1211	0/0:39,0:39:99:0,117,1629	0/0:43,0:43:99:0,129,1796	0/0:144,0:144:99:0,433,6013	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:184,0:184:99:0,554,7684	0/0:167,0:167:99:0,503,6974	0/0:150,0:150:99:0,452,6264	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:29,0:29:87.29:0,87,1211	1/1:0,33:33:99:1378,99,0
gi|293339394|gb|GU595196.1|	110817	.	T	C	5971.75	.	AC=12;AF=0.300;AN=40;BaseQRankSum=0.835;DP=2505;Dels=0.00;FS=8.440;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.116;QD=41.76;ReadPosRankSum=-10.329;SB=-2589.03	GT:AD:DP:GQ:PL	0/0:192,0:192:99:0,578,8018	0/0:176,0:176:99:0,530,7350	1/1:0,30:30:90.30:1253,90,0	1/1:0,46:46:99:1921,138,0	1/1:0,17:17:51.17:710,51,0	1/1:0,17:17:51.17:710,51,0	1/1:0,18:18:54.18:752,54,0	0/0:139,0:139:99:0,418,5805	0/0:171,0:171:99:0,515,7141	0/0:174,0:174:99:0,524,7266	0/0:181,0:181:99:0,545,7559	0/0:145,0:145:99:0,436,6055	0/0:168,0:168:99:0,506,7016	0/0:187,0:187:99:0,563,7809	0/0:174,0:174:99:0,524,7266	0/0:149,0:149:99:0,448,6222	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:172,0:172:99:0,518,7183	1/1:0,15:15:45.15:626,45,0	./.
gi|293339394|gb|GU595196.1|	110825	.	T	C	5387.10	.	AC=12;AF=0.300;AN=40;BaseQRankSum=-0.080;DP=2514;Dels=0.00;FS=34.051;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9998;MQ=254.00;MQ0=0;MQRankSum=1.436;QD=41.76;ReadPosRankSum=-13.724;SB=-1836.99	GT:AD:DP:GQ:PL	0/0:197,0:197:99:0,593,8227	0/0:179,0:179:99:0,539,7475	1/1:0,32:32:96.32:1336,96,0	1/1:0,36:36:99:1503,108,0	1/1:0,15:15:45.15:626,45,0	1/1:0,9:9:27.09:376,27,0	1/1:0,17:17:51.17:710,51,0	0/0:149,0:149:99:0,448,6222	0/0:172,0:172:99:0,518,7183	0/0:168,0:168:99:0,506,7016	0/0:180,0:180:99:0,542,7517	0/0:140,0:140:99:0,421,5846	0/0:175,0:175:99:0,527,7308	0/0:182,0:182:99:0,548,7600	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:150,0:150:99:0,452,6264	0/0:190,0:190:99:0,572,7934	0/0:172,0:172:99:0,518,7183	1/1:0,20:20:60.20:835,60,0	./.
gi|293339394|gb|GU595196.1|	110831	.	T	A	7892.72	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-0.816;DP=2567;Dels=0.00;FS=34.293;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.542;QD=41.76;ReadPosRankSum=-11.378;SB=-2964.98	GT:AD:DP:GQ:PL	0/0:193,0:193:99:0,581,8060	0/0:179,0:179:99:0,539,7475	1/1:0,29:29:87.29:1211,87,0	1/1:0,36:36:99:1503,108,0	1/1:0,24:24:72.24:1002,72,0	1/1:0,24:24:72.24:1002,72,0	1/1:0,30:30:90.30:1253,90,0	0/0:147,0:147:99:0,442,6139	0/0:176,0:176:99:0,530,7350	0/0:168,0:168:99:0,506,7016	0/0:177,0:177:99:0,533,7392	0/0:155,0:155:99:0,467,6473	0/0:178,0:178:99:0,536,7433	0/0:183,0:183:99:0,551,7642	0/0:167,0:167:99:0,503,6974	0/0:165,0:165:99:0,497,6890	0/0:133,0:133:99:0,400,5554	0/0:184,0:184:99:0,554,7684	0/0:173,0:173:99:0,521,7225	1/1:0,25:25:75.25:1044,75,0	1/1:0,21:21:63.21:877,63,0
gi|293339394|gb|GU595196.1|	110854	.	T	A	4259.57	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.358;DP=2951;Dels=0.00;FS=5.734;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.471;QD=41.76;ReadPosRankSum=2.859;SB=-1753.95	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:63,0:63:99:0,190,2631	0/0:126,0:126:99:0,379,5262	0/0:54,0:54:99:0,163,2255	0/0:60,0:60:99:0,181,2506	0/0:86,0:86:99:0,259,3591	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:185,0:185:99:0,557,7726	0/0:149,0:149:99:0,448,6222	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:177,0:177:99:0,533,7392	0/0:169,0:169:99:0,509,7057	0/0:177,0:177:99:0,533,7392	0/0:148,0:148:99:0,445,6181	0/0:191,0:191:99:0,575,7976	0/0:177,0:177:99:0,533,7392	0/0:56,0:56:99:0,169,2339	1/1:0,102:102:99:4260,307,0
gi|293339394|gb|GU595196.1|	110912	.	C	A	7391.60	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-1.477;DP=3233;Dels=0.00;FS=1.206;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.149;QD=41.76;ReadPosRankSum=1.542;SB=-3633.17	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:98,0:98:99:0,295,4093	0/0:168,0:168:99:0,506,7016	0/0:74,0:74:99:0,223,3090	0/0:100,0:100:99:0,301,4176	0/0:158,0:158:99:0,476,6598	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:179,0:179:99:0,539,7475	0/0:186,0:186:99:0,560,7767	0/0:171,0:171:99:0,515,7141	0/0:179,0:179:99:0,539,7475	0/0:172,0:172:99:0,518,7183	0/0:176,0:176:99:0,530,7350	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	0/0:165,0:165:99:0,497,6890	0/0:82,0:82:99:0,247,3424	1/1:0,177:177:99:7392,533,0
gi|293339394|gb|GU595196.1|	110939	.	T	C	36164.47	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-1.526;DP=3229;Dels=0.00;FS=9.158;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.346;QD=41.76;ReadPosRankSum=-0.969;SB=-17163.52	GT:AD:DP:GQ:PL	0/0:151,0:151:99:0,455,6306	0/0:153,0:153:99:0,461,6389	1/1:0,102:102:99:4260,307,0	1/1:0,161:161:99:6723,485,0	1/1:0,98:98:99:4093,295,0	1/1:0,106:106:99:4427,319,0	1/1:0,161:161:99:6723,485,0	0/0:167,0:167:99:0,503,6974	0/0:186,0:186:99:0,560,7767	0/0:190,0:190:99:0,572,7934	0/0:170,0:170:99:0,512,7099	0/0:200,0:200:99:0,602,8352	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:140,0:140:99:0,421,5846	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:170,0:170:99:0,512,7099	1/1:0,90:90:99:3758,271,0	1/1:0,148:148:99:6181,445,0
gi|293339394|gb|GU595196.1|	110956	.	C	T	5470.62	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.355;DP=3215;Dels=0.00;FS=8.145;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.746;QD=41.76;ReadPosRankSum=2.700;SB=-2338.60	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:165,0:165:99:0,497,6890	0/0:120,0:120:99:0,361,5011	0/0:160,0:160:99:0,482,6682	0/0:99,0:99:99:0,298,4134	0/0:100,0:100:99:0,301,4176	0/0:149,0:149:99:0,448,6222	0/0:159,0:159:99:0,479,6640	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:167,0:167:99:0,503,6974	0/0:209,0:209:99:0,629,8728	0/0:160,0:160:99:0,482,6682	0/0:157,0:157:99:0,473,6556	0/0:173,0:173:99:0,521,7225	0/0:153,0:153:99:0,461,6389	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:92,0:92:99:0,277,3842	1/1:0,131:131:99:5471,394,0
gi|293339394|gb|GU595196.1|	110990	.	G	A	25265.02	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.421;DP=3128;Dels=0.00;FS=16.819;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.109;QD=41.76;ReadPosRankSum=-2.001;SB=-10982.99	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:179,0:179:99:0,539,7475	1/1:0,101:101:99:4218,304,0	1/1:0,128:128:99:5345,385,0	1/1:0,75:75:99:3132,226,0	1/1:0,91:91:99:3800,274,0	1/1:0,139:139:99:5805,418,0	0/0:174,0:174:99:0,524,7266	0/0:188,0:188:99:0,566,7851	0/0:181,0:181:99:0,545,7559	0/0:163,0:163:99:0,491,6807	0/0:156,0:156:99:0,470,6515	0/0:153,0:153:99:0,461,6389	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:172,0:172:99:0,518,7183	0/0:151,0:151:99:0,455,6306	0/0:183,0:183:99:0,551,7642	0/0:159,0:159:99:0,479,6640	1/1:0,71:71:99:2965,214,0	0/0:143,0:143:99:0,430,5972
gi|293339394|gb|GU595196.1|	111023	.	G	A	2109.20	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.420;DP=2666;Dels=0.00;FS=45.240;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.067;QD=40.56;ReadPosRankSum=-0.697;SB=-417.62	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:169,0:169:99:0,509,7057	0/0:35,0:35:99:0,105,1462	0/0:45,0:45:99:0,135,1879	0/0:34,0:34:99:0,102,1420	0/0:45,0:45:99:0,135,1879	0/0:50,0:50:99:0,151,2088	0/0:172,0:172:99:0,518,7183	0/0:179,0:179:99:0,539,7475	0/0:173,0:173:99:0,521,7225	0/0:169,0:169:99:0,509,7057	0/0:143,0:143:99:0,430,5972	0/0:158,0:158:99:0,476,6598	0/0:187,0:187:99:0,563,7809	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	0/0:177,0:177:99:0,533,7392	0/0:173,0:173:99:0,521,7225	0/0:32,0:32:96.32:0,96,1336	1/1:0,52:52:99:2172,157,0
gi|293339394|gb|GU595196.1|	111036	.	C	A	2865.62	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.383;DP=2557;Dels=0.00;FS=4.677;HRun=3;HaplotypeScore=2.6663;InbreedingCoeff=0.9996;MQ=254.00;MQ0=0;MQRankSum=-0.003;QD=39.80;ReadPosRankSum=-8.835;SB=-1375.85	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:169,0:169:99:0,509,7057	1/1:0,9:9:27.09:376,27,0	1/1:0,11:11:33.11:459,33,0	1/1:0,13:13:39.13:543,39,0	1/1:0,16:16:48.16:668,48,0	1/1:0,12:12:36.12:501,36,0	0/0:165,0:165:99:0,497,6890	0/0:175,0:175:99:0,527,7308	0/0:192,0:192:99:0,578,8018	0/0:165,0:165:99:0,497,6890	0/0:147,0:147:99:0,442,6139	0/0:173,0:173:99:0,521,7225	0/0:186,0:186:99:0,560,7767	0/0:174,0:174:99:0,524,7266	0/0:179,0:179:99:0,539,7475	0/0:181,0:181:99:0,545,7559	0/0:190,0:190:99:0,572,7934	0/0:168,0:168:99:0,506,7016	1/1:0,11:11:33.11:459,33,0	0/0:61,0:61:99:0,184,2547
gi|293339394|gb|GU595196.1|	111038	.	A	C	4635.42	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-0.821;DP=2540;Dels=0.00;FS=6.843;HRun=0;HaplotypeScore=2.4282;InbreedingCoeff=0.9951;MQ=254.00;MQ0=0;MQRankSum=-0.564;QD=41.76;ReadPosRankSum=-9.618;SB=-1955.52	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:170,0:170:99:0,512,7099	1/1:0,5:5:15.05:209,15,0	1/1:0,9:9:27.09:376,27,0	1/1:0,8:8:24.08:334,24,0	1/1:0,13:13:39.13:543,39,0	1/1:0,9:9:27.09:376,27,0	0/0:166,0:166:99:0,500,6932	0/0:181,0:181:99:0,545,7559	0/0:184,0:184:99:0,554,7684	0/0:168,0:168:99:0,506,7016	0/0:143,0:143:99:0,430,5972	0/0:174,0:174:99:0,524,7266	0/0:188,0:188:99:0,566,7851	0/0:175,0:175:99:0,527,7308	0/0:180,0:180:99:0,542,7517	0/0:182,0:182:99:0,548,7600	0/0:187,0:187:99:0,563,7809	0/0:169,0:169:99:0,509,7057	1/1:0,7:7:21.07:292,21,0	1/1:0,60:60:99:2506,181,0
gi|293339394|gb|GU595196.1|	111044	.	C	T	2404.48	.	AC=2;AF=0.067;AN=30;BaseQRankSum=0.071;DP=2492;Dels=0.00;FS=1.005;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.495;QD=40.75;ReadPosRankSum=-1.388;SB=-1211.07	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:168,0:168:99:0,506,7016	./.	./.	./.	./.	./.	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:189,0:189:99:0,569,7893	0/0:174,0:174:99:0,524,7266	0/0:139,0:139:99:0,418,5805	0/0:175,0:175:99:0,527,7308	0/0:184,0:184:99:0,554,7684	0/0:185,0:185:99:0,557,7726	0/0:179,0:179:99:0,539,7475	0/0:174,0:174:99:0,524,7266	0/0:191,0:191:99:0,575,7976	0/0:176,0:176:99:0,530,7350	./.	1/1:0,59:59:99:2464,178,0
gi|293339394|gb|GU595196.1|	111065	.	T	G	7349.84	.	AC=10;AF=0.250;AN=40;BaseQRankSum=-0.349;DP=2674;Dels=0.00;FS=5.607;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.659;QD=41.76;ReadPosRankSum=-3.714;SB=-3340.84	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:157,0:157:99:0,473,6556	./.	1/1:0,57:57:99:2380,172,0	1/1:0,21:21:63.21:877,63,0	1/1:0,27:27:81.27:1128,81,0	1/1:0,41:41:99:1712,123,0	0/0:159,0:159:99:0,479,6640	0/0:174,0:174:99:0,524,7266	0/0:188,0:188:99:0,566,7851	0/0:173,0:173:99:0,521,7225	0/0:145,0:145:99:0,436,6055	0/0:172,0:172:99:0,518,7183	0/0:173,0:173:99:0,521,7225	0/0:187,0:187:99:0,563,7809	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	1/1:0,30:30:90.30:1253,90,0	0/0:119,0:119:99:0,358,4969
gi|293339394|gb|GU595196.1|	111071	.	G	A	9855.46	.	AC=10;AF=0.250;AN=40;BaseQRankSum=0.567;DP=2791;Dels=0.00;FS=16.083;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.624;QD=41.76;ReadPosRankSum=1.404;SB=-4217.81	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:157,0:157:99:0,473,6556	./.	1/1:0,73:73:99:3049,220,0	1/1:0,37:37:99:1545,111,0	1/1:0,31:31:93.31:1295,93,0	1/1:0,58:58:99:2422,175,0	0/0:163,0:163:99:0,491,6807	0/0:183,0:183:99:0,551,7642	0/0:197,0:197:99:0,593,8227	0/0:181,0:181:99:0,545,7559	0/0:144,0:144:99:0,433,6013	0/0:183,0:183:99:0,551,7642	0/0:175,0:175:99:0,527,7308	0/0:193,0:193:99:0,581,8060	0/0:176,0:176:99:0,530,7350	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	1/1:0,37:37:99:1545,111,0	0/0:133,0:133:99:0,400,5554
gi|293339394|gb|GU595196.1|	111095	.	C	T	1441.03	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.183;DP=3036;Dels=0.00;FS=2.079;HRun=0;HaplotypeScore=1.7141;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.835;QD=40.03;ReadPosRankSum=0.538;SB=-668.18	GT:AD:DP:GQ:PL	0/0:190,0:190:99:0,572,7934	0/0:161,0:161:99:0,485,6723	1/1:0,36:36:99:1503,108,0	0/0:145,0:145:99:0,436,6055	0/0:64,0:64:99:0,193,2673	0/0:65,0:65:99:0,196,2714	0/0:124,0:124:99:0,373,5178	0/0:142,0:142:99:0,427,5930	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:188,0:188:99:0,566,7851	0/0:170,0:170:99:0,512,7099	0/0:160,0:160:99:0,482,6682	0/0:190,0:190:99:0,572,7934	0/0:194,0:194:99:0,584,8102	0/0:166,0:166:99:0,500,6932	0/0:160,0:160:99:0,482,6682	0/0:155,0:155:99:0,467,6473	0/0:180,0:180:99:0,542,7517	0/0:70,0:70:99:0,211,2923	0/0:150,0:150:99:0,452,6264
gi|293339394|gb|GU595196.1|	111101	.	C	T	6305.83	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.137;DP=3065;Dels=0.00;FS=4.439;HRun=1;HaplotypeScore=1.7141;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.162;QD=41.76;ReadPosRankSum=-0.482;SB=-2839.72	GT:AD:DP:GQ:PL	0/0:192,0:192:99:0,578,8018	0/0:156,0:156:99:0,470,6515	0/0:41,0:41:99:0,123,1712	0/0:149,0:149:99:0,448,6222	0/0:75,0:75:99:0,226,3132	0/0:70,0:70:99:0,211,2923	0/0:121,0:121:99:0,364,5053	0/0:136,0:136:99:0,409,5679	0/0:171,0:171:99:0,515,7141	0/0:159,0:159:99:0,479,6640	0/0:186,0:186:99:0,560,7767	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:187,0:187:99:0,563,7809	0/0:200,0:200:99:0,602,8352	0/0:163,0:163:99:0,491,6807	0/0:148,0:148:99:0,445,6181	0/0:164,0:164:99:0,494,6849	0/0:195,0:195:99:0,587,8143	0/0:67,0:67:99:0,202,2798	1/1:0,151:151:99:6306,455,0
gi|293339394|gb|GU595196.1|	111104	.	C	G	6431.11	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.016;DP=3079;Dels=0.00;FS=2.928;HRun=1;HaplotypeScore=18.1404;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.262;QD=41.76;ReadPosRankSum=-0.383;SB=-2923.24	GT:AD:DP:GQ:PL	0/0:189,0:189:99:0,569,7893	0/0:156,0:156:99:0,470,6515	0/0:47,0:47:99:0,141,1963	0/0:147,0:147:99:0,442,6139	0/0:76,0:76:99:0,229,3174	0/0:70,0:70:99:0,211,2923	0/0:124,0:124:99:0,373,5178	0/0:141,0:141:99:0,424,5888	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:183,0:183:99:0,551,7642	0/0:167,0:167:99:0,503,6974	0/0:162,0:162:99:0,488,6765	0/0:190,0:190:99:0,572,7934	0/0:195,0:195:99:0,587,8143	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:164,0:164:99:0,494,6849	0/0:196,0:196:99:0,590,8185	0/0:70,0:70:99:0,211,2923	1/1:0,154:154:99:6431,464,0
gi|293339394|gb|GU595196.1|	111113	.	C	A,T	13822.69	.	AC=2,6;AF=0.048,0.143;AN=42;BaseQRankSum=0.296;DP=3135;Dels=0.00;FS=54.255;HaplotypeScore=2.9520;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-2.360;QD=41.76;ReadPosRankSum=1.531;SB=-4965.73	GT:AD:DP:GQ:PL	0/0:181,0,0:181:99:0,545,7559,545,7559,7559	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	1/1:0,62,0:62:99:2589,187,0,2589,187,2589	0/0:150,0,0:150:99:0,452,6264,452,6264,6264	2/2:0,0,74:74:99:3090,3090,3090,223,223,0	2/2:0,0,70:70:99:2923,2923,2923,211,211,0	2/2:0,0,125:125:99:5220,5220,5220,376,376,0	0/0:154,0,0:154:99:0,464,6431,464,6431,6431	0/0:168,0,0:168:99:0,506,7016,506,7016,7016	0/0:169,0,0:169:99:0,509,7057,509,7057,7057	0/0:188,0,0:188:99:0,566,7851,566,7851,7851	0/0:162,0,0:162:99:0,488,6765,488,6765,6765	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	0/0:193,0,0:193:99:0,581,8060,581,8060,8060	0/0:203,0,0:203:99:0,611,8477,611,8477,8477	0/0:165,0,0:165:99:0,497,6890,497,6890,6890	0/0:156,0,0:156:99:0,470,6515,470,6515,6515	0/0:179,0,0:179:99:0,539,7475,539,7475,7475	0/0:185,0,0:185:99:0,557,7726,557,7726,7726	0/0:63,0,0:63:99:0,190,2631,190,2631,2631	0/0:158,0,0:158:99:0,476,6598,476,6598,6598
gi|293339394|gb|GU595196.1|	111206	.	T	G	5762.94	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.234;DP=3015;Dels=0.00;FS=0.646;HRun=0;HaplotypeScore=6.5706;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.822;QD=41.76;ReadPosRankSum=4.843;SB=-2797.96	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:161,0:161:99:0,485,6723	0/0:64,0:64:99:0,193,2673	0/0:126,0:126:99:0,379,5262	0/0:66,0:66:99:0,199,2756	0/0:88,0:88:99:0,265,3675	0/0:122,0:122:99:0,367,5095	0/0:144,0:144:99:0,433,6013	0/0:161,0:161:99:0,485,6723	0/0:164,0:164:99:0,494,6849	0/0:160,0:160:99:0,482,6682	0/0:174,0:174:99:0,524,7266	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:177,0:177:99:0,533,7392	0/0:187,0:187:99:0,563,7809	0/0:168,0:168:99:0,506,7016	0/0:178,0:178:99:0,536,7433	0/0:77,0:77:99:0,232,3216	1/1:0,138:138:99:5763,415,0
gi|293339394|gb|GU595196.1|	111212	.	T	C	34201.73	.	AC=16;AF=0.381;AN=42;BaseQRankSum=-0.383;DP=3001;Dels=0.00;FS=5.710;HRun=1;HaplotypeScore=6.2373;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.103;QD=41.76;ReadPosRankSum=1.177;SB=-16244.79	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	1/1:0,55:55:99:2297,166,0	1/1:0,116:116:99:4844,349,0	1/1:0,66:66:99:2756,199,0	1/1:0,97:97:99:4051,292,0	1/1:0,119:119:99:4969,358,0	1/1:0,137:137:99:5721,412,0	0/0:164,0:164:99:0,494,6849	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:161,0:161:99:0,485,6723	0/0:154,0:154:99:0,464,6431	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:179,0:179:99:0,539,7475	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	1/1:0,81:81:99:3383,244,0	1/1:0,148:148:99:6181,445,0
gi|293339394|gb|GU595196.1|	111243	.	G	A	939.91	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.602;DP=2883;Dels=0.00;FS=21.720;HRun=1;HaplotypeScore=1.1427;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.362;QD=39.16;ReadPosRankSum=4.691;SB=-208.82	GT:AD:DP:GQ:PL	0/0:181,0:181:99:0,545,7559	0/0:157,0:157:99:0,473,6556	1/1:0,24:24:72.24:1002,72,0	0/0:138,0:138:99:0,415,5763	0/0:55,0:55:99:0,166,2297	0/0:69,0:69:99:0,208,2881	0/0:88,0:88:99:0,265,3675	0/0:124,0:124:99:0,373,5178	0/0:158,0:158:99:0,476,6598	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:151,0:151:99:0,455,6306	0/0:158,0:158:99:0,476,6598	0/0:173,0:173:99:0,521,7225	0/0:181,0:181:99:0,545,7559	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:46,0:46:99:0,138,1921	0/0:147,0:147:99:0,442,6139
gi|293339394|gb|GU595196.1|	111247	.	G	A	16077.75	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.152;DP=2837;Dels=0.00;FS=60.153;HRun=1;HaplotypeScore=0.9523;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.301;QD=41.76;ReadPosRankSum=4.471;SB=-5929.99	GT:AD:DP:GQ:PL	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	1/1:0,20:20:60.20:835,60,0	0/0:132,0:132:99:0,397,5512	1/1:0,51:51:99:2130,154,0	1/1:0,58:58:99:2422,175,0	1/1:0,76:76:99:3174,229,0	0/0:129,0:129:99:0,388,5387	0/0:156,0:156:99:0,470,6515	0/0:177,0:177:99:0,533,7392	0/0:176,0:176:99:0,530,7350	0/0:147,0:147:99:0,442,6139	0/0:161,0:161:99:0,485,6723	0/0:176,0:176:99:0,530,7350	0/0:181,0:181:99:0,545,7559	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:172,0:172:99:0,518,7183	1/1:0,38:38:99:1587,114,0	1/1:0,142:142:99:5930,427,0
gi|293339394|gb|GU595196.1|	111273	.	C	A	19836.18	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.037;DP=2839;Dels=0.00;FS=59.903;HRun=1;HaplotypeScore=8.9036;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.329;QD=41.76;ReadPosRankSum=4.438;SB=-7809.20	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	1/1:0,21:21:63.21:877,63,0	1/1:0,115:115:99:4802,346,0	1/1:0,27:27:81.27:1128,81,0	1/1:0,26:26:78.26:1086,78,0	1/1:0,52:52:99:2172,157,0	0/0:167,0:167:99:0,503,6974	0/0:137,0:137:99:0,412,5721	0/0:178,0:178:99:0,536,7433	0/0:178,0:178:99:0,536,7433	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:182,0:182:99:0,548,7600	0/0:166,0:166:99:0,500,6932	0/0:164,0:164:99:0,494,6849	0/0:168,0:168:99:0,506,7016	1/1:0,36:36:99:1503,108,0	1/1:0,198:198:99:8269,596,0
gi|293339394|gb|GU595196.1|	111276	.	C	A	11275.31	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.122;DP=2822;Dels=0.00;FS=60.017;HRun=1;HaplotypeScore=8.9036;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.054;QD=41.76;ReadPosRankSum=6.773;SB=-3967.25	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	1/1:0,26:26:78.26:1086,78,0	1/1:0,112:112:99:4677,337,0	1/1:0,28:28:84.28:1169,84,0	1/1:0,26:26:78.26:1086,78,0	1/1:0,44:44:99:1837,132,0	0/0:170,0:170:99:0,512,7099	0/0:137,0:137:99:0,412,5721	0/0:180,0:180:99:0,542,7517	0/0:170,0:170:99:0,512,7099	0/0:159,0:159:99:0,479,6640	0/0:175,0:175:99:0,527,7308	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:187,0:187:99:0,563,7809	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:172,0:172:99:0,518,7183	1/1:0,34:34:99:1420,102,0	0/0:199,0:199:99:0,599,8310
gi|293339394|gb|GU595196.1|	111311	.	G	T	15075.50	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-0.376;DP=2775;Dels=0.00;FS=8.002;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.283;QD=41.76;ReadPosRankSum=14.155;SB=-7224.55	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:158,0:158:99:0,476,6598	1/1:0,39:39:99:1629,117,0	1/1:0,59:59:99:2464,178,0	1/1:0,36:36:99:1503,108,0	1/1:0,32:32:96.32:1336,96,0	1/1:0,47:47:99:1963,141,0	0/0:195,0:195:99:0,587,8143	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:146,0:146:99:0,439,6097	0/0:184,0:184:99:0,554,7684	0/0:167,0:167:99:0,503,6974	0/0:177,0:177:99:0,533,7392	0/0:186,0:186:99:0,560,7767	0/0:171,0:171:99:0,515,7141	0/0:170,0:170:99:0,512,7099	0/0:183,0:183:99:0,551,7642	1/1:0,31:31:93.31:1295,93,0	1/1:0,117:117:99:4886,352,0
gi|293339394|gb|GU595196.1|	111340	.	G	C	236.54	.	AC=10;AF=0.263;AN=38;BaseQRankSum=0.420;DP=2478;Dels=0.00;FS=1.390;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.8044;MQ=254.00;MQ0=0;MQRankSum=-0.176;QD=29.57;ReadPosRankSum=-4.743;SB=-111.83	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:189,0:189:99:0,569,7893	1/1:0,3:3:9.03:125,9,0	1/1:0,1:1:3.01:42,3,0	1/1:0,1:1:3.01:42,3,0	./.	1/1:0,1:1:3.01:42,3,0	0/0:160,0:160:99:0,482,6682	0/0:164,0:164:99:0,494,6849	0/0:174,0:174:99:0,524,7266	0/0:184,0:184:99:0,554,7684	0/0:168,0:168:99:0,506,7016	0/0:187,0:187:99:0,563,7809	0/0:179,0:179:99:0,539,7475	0/0:183,0:183:99:0,551,7642	0/0:164,0:164:99:0,494,6849	0/0:189,0:189:99:0,569,7893	0/0:174,0:174:99:0,524,7266	0/0:189,0:189:99:0,569,7893	./.	1/1:0,2:2:6.02:84,6,0
gi|293339394|gb|GU595196.1|	111344	.	A	C	1775.47	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-1.195;DP=2526;Dels=0.00;FS=1.145;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9819;MQ=254.00;MQ0=0;MQRankSum=0.327;QD=38.60;ReadPosRankSum=-10.037;SB=-907.83	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:186,0:186:99:0,560,7767	1/1:0,7:7:21.07:292,21,0	1/1:0,11:11:33.11:459,33,0	1/1:0,5:5:15.05:209,15,0	1/1:0,4:4:12.04:167,12,0	1/1:0,7:7:21.07:292,21,0	0/0:156,0:156:99:0,470,6515	0/0:160,0:160:99:0,482,6682	0/0:185,0:185:99:0,557,7726	0/0:182,0:182:99:0,548,7600	0/0:172,0:172:99:0,518,7183	0/0:185,0:185:99:0,557,7726	0/0:180,0:180:99:0,542,7517	0/0:174,0:174:99:0,524,7266	0/0:168,0:168:99:0,506,7016	0/0:193,0:193:99:0,581,8060	0/0:185,0:185:99:0,557,7726	0/0:188,0:188:99:0,566,7851	1/1:0,4:4:12.04:167,12,0	1/1:0,8:8:24.08:334,24,0
gi|293339394|gb|GU595196.1|	111359	.	T	G	13196.28	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-1.223;DP=2767;Dels=0.00;FS=14.394;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.177;QD=41.76;ReadPosRankSum=-8.527;SB=-5804.70	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:194,0:194:99:0,584,8102	1/1:0,46:46:99:1921,138,0	1/1:0,56:56:99:2339,169,0	1/1:0,26:26:78.26:1086,78,0	1/1:0,29:29:87.29:1211,87,0	1/1:0,61:61:99:2547,184,0	0/0:152,0:152:99:0,458,6348	0/0:163,0:163:99:0,491,6807	0/0:179,0:179:99:0,539,7475	0/0:187,0:187:99:0,563,7809	0/0:168,0:168:99:0,506,7016	0/0:177,0:177:99:0,533,7392	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:154,0:154:99:0,464,6431	0/0:206,0:206:99:0,620,8603	0/0:176,0:176:99:0,530,7350	0/0:183,0:183:99:0,551,7642	1/1:0,25:25:75.25:1044,75,0	1/1:0,73:73:99:3049,220,0
gi|293339394|gb|GU595196.1|	111536	.	A	G	24346.29	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.497;DP=2908;Dels=0.00;FS=115.325;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.128;QD=41.76;ReadPosRankSum=6.718;SB=-8727.93	GT:AD:DP:GQ:PL	0/0:140,0:140:99:0,421,5846	0/0:163,0:163:99:0,491,6807	1/1:0,77:77:99:3216,232,0	1/1:0,98:98:99:4093,295,0	1/1:0,43:43:99:1796,129,0	1/1:0,74:74:99:3090,223,0	1/1:0,101:101:99:4218,304,0	0/0:151,0:151:99:0,455,6306	0/0:150,0:150:99:0,452,6264	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:155,0:155:99:0,467,6473	0/0:194,0:194:99:0,584,8102	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:151,0:151:99:0,455,6306	0/0:168,0:168:99:0,506,7016	0/0:192,0:192:99:0,578,8018	0/0:178,0:178:99:0,536,7433	1/1:0,50:50:99:2088,151,0	1/1:0,140:140:99:5846,421,0
gi|293339394|gb|GU595196.1|	111560	.	T	G	23344.05	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.618;DP=2892;Dels=0.00;FS=77.352;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.077;QD=41.76;ReadPosRankSum=-6.348;SB=-8644.41	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:168,0:168:99:0,506,7016	1/1:0,77:77:99:3216,232,0	1/1:0,106:106:99:4427,319,0	1/1:0,44:44:99:1837,132,0	1/1:0,62:62:99:2589,187,0	1/1:0,98:98:99:4093,295,0	0/0:162,0:162:99:0,488,6765	0/0:154,0:154:99:0,464,6431	0/0:188,0:188:99:0,566,7851	0/0:166,0:166:99:0,500,6932	0/0:149,0:149:99:0,448,6222	0/0:167,0:167:99:0,503,6974	0/0:165,0:165:99:0,497,6890	0/0:193,0:193:99:0,581,8060	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	1/1:0,51:51:99:2130,154,0	1/1:0,121:121:99:5053,364,0
gi|293339394|gb|GU595196.1|	111575	.	G	A	25056.22	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-0.316;DP=2975;Dels=0.00;FS=29.470;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.117;QD=41.76;ReadPosRankSum=4.919;SB=-10064.26	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:173,0:173:99:0,521,7225	1/1:0,84:84:99:3508,253,0	1/1:0,121:121:99:5053,364,0	1/1:0,48:48:99:2004,144,0	1/1:0,55:55:99:2297,166,0	1/1:0,106:106:99:4427,319,0	0/0:160,0:160:99:0,482,6682	0/0:171,0:171:99:0,515,7141	0/0:190,0:190:99:0,572,7934	0/0:163,0:163:99:0,491,6807	0/0:144,0:144:99:0,433,6013	0/0:177,0:177:99:0,533,7392	0/0:165,0:165:99:0,497,6890	0/0:189,0:189:99:0,569,7893	0/0:175,0:175:99:0,527,7308	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	1/1:0,65:65:99:2714,196,0	1/1:0,121:121:99:5053,364,0
gi|293339394|gb|GU595196.1|	111638	.	T	A	26517.83	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-0.707;DP=3282;Dels=0.00;FS=5.393;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.555;QD=41.76;ReadPosRankSum=0.189;SB=-12486.36	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:121,0:121:99:0,364,5053	0/0:173,0:173:99:0,521,7225	1/1:0,91:91:99:3800,274,0	1/1:0,87:87:99:3633,262,0	1/1:0,172:172:99:7183,518,0	0/0:176,0:176:99:0,530,7350	0/0:175,0:175:99:0,527,7308	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	0/0:180,0:180:99:0,542,7517	0/0:155,0:155:99:0,467,6473	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:150,0:150:99:0,452,6264	0/0:179,0:179:99:0,539,7475	1/1:0,89:89:99:3717,268,0	1/1:0,196:196:99:8185,590,0
gi|293339394|gb|GU595196.1|	111653	.	C	T	3507.89	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.269;DP=3319;Dels=0.00;FS=2.359;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.075;QD=41.76;ReadPosRankSum=0.632;SB=-1628.67	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	0/0:131,0:131:99:0,394,5471	0/0:180,0:180:99:0,542,7517	0/0:96,0:96:99:0,289,4009	0/0:94,0:94:99:0,283,3925	0/0:168,0:168:99:0,506,7016	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:154,0:154:99:0,464,6431	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:193,0:193:99:0,581,8060	1/1:0,84:84:99:3508,253,0	0/0:183,0:183:99:0,551,7642
gi|293339394|gb|GU595196.1|	111668	.	G	A	14950.22	.	AC=6;AF=0.143;AN=42;BaseQRankSum=2.001;DP=3285;Dels=0.00;FS=0.622;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.162;QD=41.76;ReadPosRankSum=1.050;SB=-7475.12	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:150,0:150:99:0,452,6264	0/0:135,0:135:99:0,406,5638	0/0:184,0:184:99:0,554,7684	1/1:0,77:77:99:3216,232,0	1/1:0,112:112:99:4677,337,0	1/1:0,169:169:99:7057,509,0	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	0/0:162,0:162:99:0,488,6765	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:174,0:174:99:0,524,7266	0/0:185,0:185:99:0,557,7726	0/0:142,0:142:99:0,427,5930	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	0/0:191,0:191:99:0,575,7976	0/0:85,0:85:99:0,256,3550	0/0:181,0:181:99:0,545,7559
gi|293339394|gb|GU595196.1|	111701	.	C	G	26935.43	.	AC=10;AF=0.238;AN=42;BaseQRankSum=-1.545;DP=3291;Dels=0.00;FS=4.476;HRun=4;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.195;QD=41.76;ReadPosRankSum=-0.332;SB=-13112.76	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:139,0:139:99:0,418,5805	0/0:144,0:144:99:0,433,6013	0/0:161,0:161:99:0,485,6723	1/1:0,89:89:99:3717,268,0	1/1:0,111:111:99:4635,334,0	1/1:0,169:169:99:7057,509,0	0/0:158,0:158:99:0,476,6598	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:148,0:148:99:0,445,6181	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:180,0:180:99:0,542,7517	0/0:193,0:193:99:0,581,8060	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	1/1:0,91:91:99:3800,274,0	1/1:0,185:185:99:7726,557,0
gi|293339394|gb|GU595196.1|	111716	.	T	G	37375.52	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-0.619;DP=3302;Dels=0.00;FS=16.352;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.537;QD=41.76;ReadPosRankSum=1.861;SB=-17455.84	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:145,0:145:99:0,436,6055	1/1:0,136:136:99:5679,409,0	1/1:0,154:154:99:6431,464,0	1/1:0,85:85:99:3550,256,0	1/1:0,95:95:99:3967,286,0	1/1:0,155:155:99:6473,467,0	0/0:152,0:152:99:0,458,6348	0/0:172,0:172:99:0,518,7183	0/0:196,0:196:99:0,590,8185	0/0:152,0:152:99:0,458,6348	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:174,0:174:99:0,524,7266	0/0:179,0:179:99:0,539,7475	0/0:192,0:192:99:0,578,8018	0/0:188,0:188:99:0,566,7851	0/0:183,0:183:99:0,551,7642	0/0:174,0:174:99:0,524,7266	1/1:0,85:85:99:3550,256,0	1/1:0,185:185:99:7726,557,0
gi|293339394|gb|GU595196.1|	111734	.	C	T	6598.15	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.248;DP=3350;Dels=0.00;FS=5.934;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.037;QD=41.76;ReadPosRankSum=-0.157;SB=-2965.00	GT:AD:DP:GQ:PL	0/0:180,0:180:99:0,542,7517	0/0:156,0:156:99:0,470,6515	0/0:121,0:121:99:0,364,5053	1/1:0,158:158:99:6598,476,0	0/0:76,0:76:99:0,229,3174	0/0:98,0:98:99:0,295,4093	0/0:166,0:166:99:0,500,6932	0/0:154,0:154:99:0,464,6431	0/0:187,0:187:99:0,563,7809	0/0:205,0:205:99:0,617,8561	0/0:154,0:154:99:0,464,6431	0/0:181,0:181:99:0,545,7559	0/0:171,0:171:99:0,515,7141	0/0:196,0:196:99:0,590,8185	0/0:176,0:176:99:0,530,7350	0/0:183,0:183:99:0,551,7642	0/0:178,0:178:99:0,536,7433	0/0:177,0:177:99:0,533,7392	0/0:154,0:154:99:0,464,6431	0/0:92,0:92:99:0,277,3842	0/0:187,0:187:99:0,563,7809
gi|293339394|gb|GU595196.1|	111761	.	C	T	26935.43	.	AC=10;AF=0.238;AN=42;BaseQRankSum=0.811;DP=3376;Dels=0.00;FS=14.487;HRun=0;HaplotypeScore=6.4277;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.854;QD=41.76;ReadPosRankSum=0.596;SB=-12194.04	GT:AD:DP:GQ:PL	0/0:195,0:195:99:0,587,8143	0/0:183,0:183:99:0,551,7642	0/0:117,0:117:99:0,352,4886	0/0:141,0:141:99:0,424,5888	1/1:0,84:84:99:3508,253,0	1/1:0,106:106:99:4427,319,0	1/1:0,175:175:99:7308,527,0	0/0:154,0:154:99:0,464,6431	0/0:187,0:187:99:0,563,7809	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:193,0:193:99:0,581,8060	0/0:199,0:199:99:0,599,8310	0/0:158,0:158:99:0,476,6598	0/0:151,0:151:99:0,455,6306	0/0:190,0:190:99:0,572,7934	0/0:182,0:182:99:0,548,7600	0/0:166,0:166:99:0,500,6932	1/1:0,89:89:99:3717,268,0	1/1:0,191:191:99:7976,575,0
gi|293339394|gb|GU595196.1|	111764	.	G	A	6264.07	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.779;DP=3369;Dels=0.00;FS=4.456;HRun=0;HaplotypeScore=7.1419;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.942;QD=41.76;ReadPosRankSum=-0.194;SB=-2923.24	GT:AD:DP:GQ:PL	0/0:199,0:199:99:0,599,8310	0/0:182,0:182:99:0,548,7600	0/0:119,0:119:99:0,358,4969	1/1:0,150:150:99:6264,452,0	0/0:88,0:88:99:0,265,3675	0/0:111,0:111:99:0,334,4635	0/0:179,0:179:99:0,539,7475	0/0:156,0:156:99:0,470,6515	0/0:194,0:194:99:0,584,8102	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:171,0:171:99:0,515,7141	0/0:185,0:185:99:0,557,7726	0/0:192,0:192:99:0,578,8018	0/0:159,0:159:99:0,479,6640	0/0:153,0:153:99:0,461,6389	0/0:188,0:188:99:0,566,7851	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	0/0:82,0:82:99:0,247,3424	0/0:186,0:186:99:0,560,7767
gi|293339394|gb|GU595196.1|	111839	.	T	A	27186	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.541;DP=3253;Dels=0.00;FS=26.066;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.377;QD=41.76;ReadPosRankSum=0.330;SB=-11776.43	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:157,0:157:99:0,473,6556	1/1:0,102:102:99:4260,307,0	0/0:162,0:162:99:0,488,6765	1/1:0,68:68:99:2840,205,0	1/1:0,81:81:99:3383,244,0	1/1:0,130:130:99:5429,391,0	0/0:152,0:152:99:0,458,6348	0/0:163,0:163:99:0,491,6807	0/0:166,0:166:99:0,500,6932	0/0:195,0:195:99:0,587,8143	0/0:186,0:186:99:0,560,7767	0/0:166,0:166:99:0,500,6932	0/0:193,0:193:99:0,581,8060	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:166,0:166:99:0,500,6932	0/0:176,0:176:99:0,530,7350	0/0:204,0:204:99:0,614,8519	1/1:0,99:99:99:4134,298,0	1/1:0,171:171:99:7141,515,0
gi|293339394|gb|GU595196.1|	111845	.	G	A	27018.95	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.084;DP=3245;Dels=0.00;FS=33.611;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.838;QD=41.76;ReadPosRankSum=0.481;SB=-11400.59	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:160,0:160:99:0,482,6682	1/1:0,102:102:99:4260,307,0	0/0:147,0:147:99:0,442,6139	1/1:0,68:68:99:2840,205,0	1/1:0,80:80:99:3341,241,0	1/1:0,134:134:99:5596,403,0	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:177,0:177:99:0,533,7392	0/0:187,0:187:99:0,563,7809	0/0:187,0:187:99:0,563,7809	0/0:160,0:160:99:0,482,6682	0/0:191,0:191:99:0,575,7976	0/0:184,0:184:99:0,554,7684	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:167,0:167:99:0,503,6974	0/0:198,0:198:99:0,596,8269	1/1:0,97:97:99:4051,292,0	1/1:0,166:166:99:6932,500,0
gi|293339394|gb|GU595196.1|	111888	.	C	A	10273.06	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.462;DP=3068;Dels=0.00;FS=51.361;HRun=5;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.006;QD=41.76;ReadPosRankSum=-0.435;SB=-3466.13	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:145,0:145:99:0,436,6055	0/0:103,0:103:99:0,310,4301	0/0:153,0:153:99:0,461,6389	1/1:0,49:49:99:2046,147,0	1/1:0,72:72:99:3007,217,0	1/1:0,125:125:99:5220,376,0	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:187,0:187:99:0,563,7809	0/0:173,0:173:99:0,521,7225	0/0:155,0:155:99:0,467,6473	0/0:156,0:156:99:0,470,6515	0/0:161,0:161:99:0,485,6723	0/0:184,0:184:99:0,554,7684	0/0:160,0:160:99:0,482,6682	0/0:185,0:185:99:0,557,7726	0/0:170,0:170:99:0,512,7099	0/0:155,0:155:99:0,467,6473	0/0:72,0:72:99:0,217,3007	0/0:154,0:154:99:0,464,6431
gi|293339394|gb|GU595196.1|	111912	.	G	A	10690.66	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.233;DP=3046;Dels=0.00;FS=80.438;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.255;QD=41.76;ReadPosRankSum=-0.791;SB=-3090.28	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:161,0:161:99:0,485,6723	0/0:96,0:96:99:0,289,4009	0/0:144,0:144:99:0,433,6013	1/1:0,45:45:99:1879,135,0	1/1:0,82:82:99:3424,247,0	1/1:0,129:129:99:5387,388,0	0/0:149,0:149:99:0,448,6222	0/0:182,0:182:99:0,548,7600	0/0:179,0:179:99:0,539,7475	0/0:161,0:161:99:0,485,6723	0/0:157,0:157:99:0,473,6556	0/0:155,0:155:99:0,467,6473	0/0:169,0:169:99:0,509,7057	0/0:182,0:182:99:0,548,7600	0/0:145,0:145:99:0,436,6055	0/0:195,0:195:99:0,587,8143	0/0:175,0:175:99:0,527,7308	0/0:156,0:156:99:0,470,6515	0/0:63,0:63:99:0,190,2631	0/0:146,0:146:99:0,439,6097
gi|293339394|gb|GU595196.1|	112057	.	C	A	18499.85	.	AC=12;AF=0.286;AN=42;BaseQRankSum=-0.083;DP=2887;Dels=0.00;FS=7.482;HRun=0;HaplotypeScore=3.6662;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.878;QD=41.76;ReadPosRankSum=3.924;SB=-8101.52	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:147,0:147:99:0,442,6139	1/1:0,96:96:99:4009,289,0	0/0:149,0:149:99:0,448,6222	1/1:0,38:38:99:1587,114,0	1/1:0,30:30:90.30:1253,90,0	1/1:0,61:61:99:2547,184,0	0/0:165,0:165:99:0,497,6890	0/0:180,0:180:99:0,542,7517	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:154,0:154:99:0,464,6431	0/0:147,0:147:99:0,442,6139	0/0:145,0:145:99:0,436,6055	0/0:179,0:179:99:0,539,7475	0/0:188,0:188:99:0,566,7851	1/1:0,64:64:99:2673,193,0	1/1:0,154:154:99:6431,464,0
gi|293339394|gb|GU595196.1|	112067	.	G	A	3110.59	.	AC=6;AF=0.143;AN=42;BaseQRankSum=2.388;DP=2859;Dels=0.00;FS=15.610;HRun=1;HaplotypeScore=3.6662;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.921;QD=40.40;ReadPosRankSum=-4.623;SB=-1127.51	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:140,0:140:99:0,421,5846	0/0:90,0:90:99:0,271,3758	0/0:147,0:147:99:0,442,6139	1/1:0,17:17:51.17:710,51,0	1/1:0,19:19:57.19:793,57,0	1/1:0,41:41:99:1712,123,0	0/0:165,0:165:99:0,497,6890	0/0:180,0:180:99:0,542,7517	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	0/0:176,0:176:99:0,530,7350	0/0:155,0:155:99:0,467,6473	0/0:156,0:156:99:0,470,6515	0/0:150,0:150:99:0,452,6264	0/0:166,0:166:99:0,500,6932	0/0:182,0:182:99:0,548,7600	0/0:69,0:69:99:0,208,2881	0/0:155,0:155:99:0,467,6473
gi|293339394|gb|GU595196.1|	112083	.	A	C	18917.45	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.869;DP=2784;Dels=0.00;FS=9.536;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=0.046;QD=41.76;ReadPosRankSum=0.091;SB=-8560.61	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:150,0:150:99:0,452,6264	1/1:0,70:70:99:2923,211,0	1/1:0,143:143:99:5972,430,0	1/1:0,10:10:30.10:418,30,0	1/1:0,17:17:51.17:710,51,0	1/1:0,21:21:63.21:877,63,0	0/0:149,0:149:99:0,448,6222	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	0/0:171,0:171:99:0,515,7141	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:191,0:191:99:0,575,7976	0/0:169,0:169:99:0,509,7057	0/0:155,0:155:99:0,467,6473	0/0:156,0:156:99:0,470,6515	0/0:177,0:177:99:0,533,7392	0/0:167,0:167:99:0,503,6974	1/1:0,61:61:99:2547,184,0	1/1:0,131:131:99:5471,394,0
gi|293339394|gb|GU595196.1|	112097	.	A	G	12319.32	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.099;DP=2677;Dels=0.00;FS=0.941;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9999;MQ=254.00;MQ0=0;MQRankSum=-0.911;QD=41.76;ReadPosRankSum=11.883;SB=-5929.71	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:157,0:157:99:0,473,6556	1/1:0,39:39:99:1629,117,0	1/1:0,99:99:99:4134,298,0	1/1:0,10:10:30.10:418,30,0	1/1:0,17:17:51.17:710,51,0	1/1:0,21:21:63.21:877,63,0	0/0:149,0:149:99:0,448,6222	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:185,0:185:99:0,557,7726	0/0:175,0:175:99:0,527,7308	0/0:157,0:157:99:0,473,6556	0/0:183,0:183:99:0,551,7642	0/0:170,0:170:99:0,512,7099	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:185,0:185:99:0,557,7726	0/0:164,0:164:99:0,494,6849	1/1:0,36:36:99:1503,108,0	1/1:0,73:73:99:3049,220,0
gi|293339394|gb|GU595196.1|	112130	.	C	T	1424.43	.	AC=10;AF=0.263;AN=38;BaseQRankSum=0.366;DP=2432;Dels=0.00;FS=0.610;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9631;MQ=254.00;MQ0=0;MQRankSum=0.180;QD=38.50;ReadPosRankSum=-9.522;SB=-743.07	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:170,0:170:99:0,512,7099	1/1:0,7:7:21.07:292,21,0	1/1:0,12:12:36.12:501,36,0	1/1:0,4:4:12.04:167,12,0	1/1:0,2:2:6.02:84,6,0	1/1:0,12:12:36.12:501,36,0	0/0:140,0:140:99:0,421,5846	0/0:166,0:166:99:0,500,6932	0/0:181,0:181:99:0,545,7559	0/0:180,0:180:99:0,542,7517	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:177,0:177:99:0,533,7392	0/0:163,0:163:99:0,491,6807	./.	./.
gi|293339394|gb|GU595196.1|	112136	.	G	T	6264.07	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.977;DP=2534;Dels=0.00;FS=3.001;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9998;MQ=254.00;MQ0=0;MQRankSum=-1.505;QD=41.76;ReadPosRankSum=-13.719;SB=-3006.35	GT:AD:DP:GQ:PL	0/0:185,0:185:99:0,557,7726	0/0:167,0:167:99:0,503,6974	1/1:0,25:25:75.25:1044,75,0	1/1:0,28:28:84.28:1169,84,0	1/1:0,13:13:39.13:543,39,0	1/1:0,10:10:30.10:418,30,0	1/1:0,31:31:93.31:1295,93,0	0/0:146,0:146:99:0,439,6097	0/0:171,0:171:99:0,515,7141	0/0:169,0:169:99:0,509,7057	0/0:184,0:184:99:0,554,7684	0/0:175,0:175:99:0,527,7308	0/0:165,0:165:99:0,497,6890	0/0:183,0:183:99:0,551,7642	0/0:154,0:154:99:0,464,6431	0/0:169,0:169:99:0,509,7057	0/0:165,0:165:99:0,497,6890	0/0:178,0:178:99:0,536,7433	0/0:173,0:173:99:0,521,7225	1/1:0,10:10:30.10:418,30,0	1/1:0,33:33:99:1378,99,0
gi|293339394|gb|GU595196.1|	112151	.	C	A	4092.53	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.169;DP=2784;Dels=0.00;FS=1.669;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.442;QD=41.76;ReadPosRankSum=0.113;SB=-2004.11	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:181,0:181:99:0,545,7559	0/0:60,0:60:99:0,181,2506	0/0:95,0:95:99:0,286,3967	0/0:38,0:38:99:0,114,1587	0/0:44,0:44:99:0,132,1837	0/0:83,0:83:99:0,250,3466	0/0:144,0:144:99:0,433,6013	0/0:166,0:166:99:0,500,6932	0/0:170,0:170:99:0,512,7099	0/0:180,0:180:99:0,542,7517	0/0:173,0:173:99:0,521,7225	0/0:178,0:178:99:0,536,7433	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:182,0:182:99:0,548,7600	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	0/0:157,0:157:99:0,473,6556	1/1:0,13:13:39.13:543,39,0	1/1:0,85:85:99:3550,256,0
gi|293339394|gb|GU595196.1|	112187	.	T	C	34.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.344;DP=3184;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.8839;MQ=254.00;MQ0=0;MQRankSum=0.010;QD=17.25;ReadPosRankSum=-2.371;SB=-38.87	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:162,0:162:99:0,488,6765	0/0:131,0:131:99:0,394,5471	0/0:201,0:201:99:0,605,8394	0/0:101,0:101:99:0,304,4218	0/0:108,0:108:99:0,325,4510	0/0:155,0:155:99:0,467,6473	0/0:155,0:155:99:0,467,6473	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	0/0:171,0:171:99:0,515,7141	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:188,0:188:99:0,566,7851	0/0:169,0:169:99:0,509,7057	0/0:160,0:160:99:0,482,6682	0/0:158,0:158:99:0,476,6598	0/0:167,0:167:99:0,503,6974	0/0:152,0:152:99:0,458,6348	1/1:0,2:2:6.02:84,6,0	0/0:162,0:162:99:0,488,6765
gi|293339394|gb|GU595196.1|	112206	.	A	G	7308.08	.	AC=2;AF=0.050;AN=40;BaseQRankSum=-0.667;DP=3019;Dels=0.00;FS=2.316;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.400;QD=41.76;ReadPosRankSum=-2.286;SB=-3507.89	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:146,0:146:99:0,439,6097	0/0:115,0:115:99:0,346,4802	0/0:153,0:153:99:0,461,6389	0/0:75,0:75:99:0,226,3132	0/0:87,0:87:99:0,262,3633	0/0:123,0:123:99:0,370,5137	0/0:160,0:160:99:0,482,6682	0/0:180,0:180:99:0,542,7517	0/0:178,0:178:99:0,536,7433	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	0/0:186,0:186:99:0,560,7767	0/0:161,0:161:99:0,485,6723	0/0:155,0:155:99:0,467,6473	0/0:128,0:128:99:0,385,5345	0/0:164,0:164:99:0,494,6849	0/0:164,0:164:99:0,494,6849	./.	1/1:0,175:175:99:7308,527,0
gi|293339394|gb|GU595196.1|	112215	.	C	T	34.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.661;DP=2908;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.1905;InbreedingCoeff=0.8839;MQ=254.00;MQ0=0;MQRankSum=0.541;QD=17.25;ReadPosRankSum=-2.396;SB=-38.87	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:150,0:150:99:0,452,6264	0/0:104,0:104:99:0,313,4343	0/0:118,0:118:99:0,355,4928	0/0:57,0:57:99:0,172,2380	0/0:72,0:72:99:0,217,3007	0/0:101,0:101:99:0,304,4218	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	0/0:178,0:178:99:0,536,7433	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	0/0:175,0:175:99:0,527,7308	0/0:163,0:163:99:0,491,6807	0/0:153,0:153:99:0,461,6389	0/0:100,0:100:99:0,301,4176	0/0:165,0:165:99:0,497,6890	0/0:176,0:176:99:0,530,7350	1/1:0,2:2:6.02:84,6,0	0/0:184,0:184:99:0,554,7684
gi|293339394|gb|GU595196.1|	112216	.	A	T	34.51	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.964;DP=2886;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.1905;InbreedingCoeff=0.8839;MQ=254.00;MQ0=0;MQRankSum=-0.664;QD=17.25;ReadPosRankSum=-2.158;SB=-38.87	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:147,0:147:99:0,442,6139	0/0:102,0:102:99:0,307,4260	0/0:114,0:114:99:0,343,4761	0/0:55,0:55:99:0,166,2297	0/0:70,0:70:99:0,211,2923	0/0:99,0:99:99:0,298,4134	0/0:165,0:165:99:0,497,6890	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:164,0:164:99:0,494,6849	0/0:176,0:176:99:0,530,7350	0/0:162,0:162:99:0,488,6765	0/0:152,0:152:99:0,458,6348	0/0:95,0:95:99:0,286,3967	0/0:168,0:168:99:0,506,7016	0/0:174,0:174:99:0,524,7266	1/1:0,2:2:6.02:84,6,0	0/0:189,0:189:99:0,569,7893
gi|293339394|gb|GU595196.1|	112236	.	G	A	686.69	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.429;DP=2590;Dels=0.00;FS=4.900;HRun=4;HaplotypeScore=2.3806;InbreedingCoeff=-0.0500;MQ=254.00;MQ0=0;MQRankSum=-0.502;QD=6.87;ReadPosRankSum=-7.065;SB=-297.16	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:82,0:82:99:0,247,3424	0/1:36,9:45:99:240,0,1368	0/0:12,0:12:36.12:0,36,501	0/0:21,0:21:63.21:0,63,877	0/0:30,0:30:90.30:0,90,1253	0/0:161,0:161:99:0,485,6723	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:169,0:169:99:0,509,7057	0/0:157,0:157:99:0,473,6556	0/0:149,0:149:99:0,448,6222	0/0:156,0:156:99:0,470,6515	0/0:154,0:154:99:0,464,6431	0/1:39,16:55:99:503,0,1463	0/0:171,0:171:99:0,515,7141	0/0:167,0:167:99:0,503,6974	0/0:34,0:34:99:0,102,1420	0/0:179,0:179:99:0,539,7475
gi|293339394|gb|GU595196.1|	112238	.	A	G	1259.29	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.780;DP=2567;Dels=0.00;FS=2.840;HRun=2;HaplotypeScore=1.9521;InbreedingCoeff=-0.0502;MQ=254.00;MQ0=0;MQRankSum=-1.025;QD=12.11;ReadPosRankSum=-7.981;SB=-577.06	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:159,0:159:99:0,479,6640	0/0:78,0:78:99:0,235,3257	0/1:32,14:46:99:446,0,1198	0/0:7,0:7:21.07:0,21,292	0/0:17,0:17:51.17:0,51,710	0/0:25,0:25:75.25:0,75,1044	0/0:157,0:157:99:0,473,6556	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:169,0:169:99:0,509,7057	0/0:162,0:162:99:0,488,6765	0/0:165,0:165:99:0,497,6890	0/0:150,0:150:99:0,452,6264	0/0:160,0:160:99:0,482,6682	0/0:151,0:151:99:0,455,6306	0/1:33,25:58:99:869,0,1204	0/0:172,0:172:99:0,518,7183	0/0:167,0:167:99:0,503,6974	0/0:37,0:37:99:0,111,1545	0/0:177,0:177:99:0,533,7392
gi|293339394|gb|GU595196.1|	112245	.	A	C	594.73	.	AC=5;AF=0.119;AN=42;BaseQRankSum=-1.123;DP=2521;Dels=0.00;FS=2.590;HRun=1;HaplotypeScore=1.9521;InbreedingCoeff=-0.1315;MQ=254.00;MQ0=0;MQRankSum=-1.756;QD=4.84;ReadPosRankSum=-7.813;SB=-283.79	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:162,0:162:99:0,488,6765	0/0:76,0:76:99:0,229,3174	0/1:25,9:34:99:274,0,942	0/1:10,1:11:8.65:9,0,384	0/1:4,3:7:99:104,0,146	0/1:14,4:18:99:113,0,530	0/0:155,0:155:99:0,467,6473	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:155,0:155:99:0,467,6473	0/0:159,0:159:99:0,479,6640	0/0:150,0:150:99:0,452,6264	0/0:157,0:157:99:0,473,6556	0/0:144,0:144:99:0,433,6013	0/1:45,8:53:99:175,0,1720	0/0:169,0:169:99:0,509,7057	0/0:171,0:171:99:0,515,7141	0/0:40,0:40:99:0,120,1670	0/0:175,0:175:99:0,527,7308
gi|293339394|gb|GU595196.1|	112246	.	C	A	240.22	.	AC=5;AF=0.119;AN=42;BaseQRankSum=0.394;DP=2522;Dels=0.00;FS=4.866;HRun=8;HaplotypeScore=1.5236;InbreedingCoeff=-0.1311;MQ=254.00;MQ0=0;MQRankSum=0.765;QD=2.07;ReadPosRankSum=-6.685;SB=-120.60	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:77,0:77:99:0,232,3216	0/1:27,6:33:99:151,0,1028	0/1:10,1:11:8.65:9,0,384	0/1:4,3:7:99:104,0,146	0/1:14,2:16:35.36:35,0,536	0/0:156,0:156:99:0,470,6515	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:164,0:164:99:0,494,6849	0/0:157,0:157:99:0,473,6556	0/0:153,0:153:99:0,461,6389	0/0:160,0:160:99:0,482,6682	0/0:147,0:147:99:0,442,6139	0/1:45,4:49:19.55:20,0,1732	0/0:166,0:166:99:0,500,6932	0/0:166,0:166:99:0,500,6932	0/0:41,0:41:99:0,123,1712	0/0:175,0:175:99:0,527,7308
gi|293339394|gb|GU595196.1|	112272	.	G	A	2944.43	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.363;DP=2634;Dels=0.00;FS=10.261;HRun=0;HaplotypeScore=1.3332;InbreedingCoeff=0.9694;MQ=254.00;MQ0=0;MQRankSum=-0.754;QD=40.89;ReadPosRankSum=0.845;SB=-1169.09	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:166,0:166:99:0,500,6932	1/1:0,72:72:99:3007,217,0	0/0:67,0:67:99:0,202,2798	0/0:10,0:10:30.10:0,30,418	0/0:4,0:4:12.04:0,12,167	0/0:14,0:14:42.14:0,42,585	0/0:157,0:157:99:0,473,6556	0/0:168,0:168:99:0,506,7016	0/0:171,0:171:99:0,515,7141	0/0:152,0:152:99:0,458,6348	0/0:165,0:165:99:0,497,6890	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:127,0:127:99:0,382,5304	0/0:167,0:167:99:0,503,6974	0/0:168,0:168:99:0,506,7016	0/0:55,0:55:99:0,166,2297	0/0:140,0:140:99:0,421,5846
gi|293339394|gb|GU595196.1|	112273	.	C	T	1067.25	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.406;DP=2643;Dels=0.00;FS=1.517;HRun=0;HaplotypeScore=2.6663;InbreedingCoeff=0.9883;MQ=254.00;MQ0=0;MQRankSum=0.609;QD=38.12;ReadPosRankSum=3.953;SB=-539.10	GT:AD:DP:GQ:PL	0/0:149,0:149:99:0,448,6222	0/0:169,0:169:99:0,509,7057	0/0:71,0:71:99:0,214,2965	0/0:70,0:70:99:0,211,2923	1/1:0,10:10:30.10:418,30,0	1/1:0,4:4:12.04:167,12,0	1/1:0,14:14:42.14:585,42,0	0/0:153,0:153:99:0,461,6389	0/0:166,0:166:99:0,500,6932	0/0:174,0:174:99:0,524,7266	0/0:150,0:150:99:0,452,6264	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:171,0:171:99:0,515,7141	0/0:173,0:173:99:0,521,7225	0/0:166,0:166:99:0,500,6932	0/0:132,0:132:99:0,397,5512	0/0:169,0:169:99:0,509,7057	0/0:170,0:170:99:0,512,7099	0/0:55,0:55:99:0,166,2297	0/0:137,0:137:99:0,412,5721
gi|293339394|gb|GU595196.1|	112283	.	A	C	1067.25	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.327;DP=2717;Dels=0.00;FS=1.514;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9883;MQ=254.00;MQ0=0;MQRankSum=-0.028;QD=38.12;ReadPosRankSum=-3.188;SB=-539.10	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:160,0:160:99:0,482,6682	0/0:75,0:75:99:0,226,3132	0/0:82,0:82:99:0,247,3424	1/1:0,10:10:30.10:418,30,0	1/1:0,4:4:12.04:167,12,0	1/1:0,14:14:42.14:585,42,0	0/0:148,0:148:99:0,445,6181	0/0:180,0:180:99:0,542,7517	0/0:184,0:184:99:0,554,7684	0/0:151,0:151:99:0,455,6306	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	0/0:173,0:173:99:0,521,7225	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:166,0:166:99:0,500,6932	0/0:169,0:169:99:0,509,7057	0/0:185,0:185:99:0,557,7726	0/0:53,0:53:99:0,160,2213	0/0:131,0:131:99:0,394,5471
gi|293339394|gb|GU595196.1|	112294	.	G	T	1774.32	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.303;DP=2798;Dels=0.00;FS=33.518;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9998;MQ=254.00;MQ0=0;MQRankSum=-0.244;QD=39.43;ReadPosRankSum=-5.549;SB=-459.19	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:163,0:163:99:0,491,6807	0/0:62,0:62:99:0,187,2589	0/0:81,0:81:99:0,244,3383	1/1:0,10:10:30.10:418,30,0	1/1:0,13:13:39.13:543,39,0	1/1:0,22:22:66.22:919,66,0	0/0:153,0:153:99:0,461,6389	0/0:184,0:184:99:0,554,7684	0/0:180,0:180:99:0,542,7517	0/0:166,0:166:99:0,500,6932	0/0:162,0:162:99:0,488,6765	0/0:178,0:178:99:0,536,7433	0/0:185,0:185:99:0,557,7726	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:180,0:180:99:0,542,7517	0/0:185,0:185:99:0,557,7726	0/0:54,0:54:99:0,163,2255	0/0:127,0:127:99:0,382,5304
gi|293339394|gb|GU595196.1|	112310	.	A	G	4134.29	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.594;DP=2815;Dels=0.00;FS=22.466;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.335;QD=41.76;ReadPosRankSum=1.652;SB=-1545.15	GT:AD:DP:GQ:PL	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	0/0:47,0:47:99:0,141,1963	0/0:80,0:80:99:0,241,3341	1/1:0,23:23:69.23:960,69,0	1/1:0,31:31:93.31:1295,93,0	1/1:0,45:45:99:1879,135,0	0/0:150,0:150:99:0,452,6264	0/0:183,0:183:99:0,551,7642	0/0:190,0:190:99:0,572,7934	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:181,0:181:99:0,545,7559	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:179,0:179:99:0,539,7475	0/0:190,0:190:99:0,572,7934	0/0:53,0:53:99:0,160,2213	0/0:114,0:114:99:0,343,4761
gi|293339394|gb|GU595196.1|	112363	.	G	T	23678.13	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.247;DP=2929;Dels=0.00;FS=1.496;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.077;QD=41.76;ReadPosRankSum=0.024;SB=-11818.16	GT:AD:DP:GQ:PL	0/0:144,0:144:99:0,433,6013	0/0:163,0:163:99:0,491,6807	1/1:0,68:68:99:2840,205,0	1/1:0,99:99:99:4134,298,0	1/1:0,51:51:99:2130,154,0	1/1:0,76:76:99:3174,229,0	1/1:0,111:111:99:4635,334,0	0/0:178,0:178:99:0,536,7433	0/0:157,0:157:99:0,473,6556	0/0:170,0:170:99:0,512,7099	0/0:176,0:176:99:0,530,7350	0/0:174,0:174:99:0,524,7266	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:193,0:193:99:0,581,8060	0/0:169,0:169:99:0,509,7057	1/1:0,34:34:99:1420,102,0	1/1:0,128:128:99:5345,385,0
gi|293339394|gb|GU595196.1|	112420	.	G	T	15117.26	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-0.429;DP=2848;Dels=0.00;FS=11.418;HRun=0;HaplotypeScore=9.1893;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.549;QD=41.76;ReadPosRankSum=3.806;SB=-6932.23	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:164,0:164:99:0,494,6849	1/1:0,99:99:99:4134,298,0	1/1:0,86:86:99:3591,259,0	0/0:56,0:56:99:0,169,2339	0/0:64,0:64:99:0,193,2673	0/0:87,0:87:99:0,262,3633	0/0:156,0:156:99:0,470,6515	0/0:155,0:155:99:0,467,6473	0/0:179,0:179:99:0,539,7475	0/0:160,0:160:99:0,482,6682	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:142,0:142:99:0,427,5930	0/0:136,0:136:99:0,409,5679	0/0:171,0:171:99:0,515,7141	0/0:171,0:171:99:0,515,7141	1/1:0,44:44:99:1837,132,0	1/1:0,133:133:99:5554,400,0
gi|293339394|gb|GU595196.1|	112423	.	T	C	8560.89	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.619;DP=2857;Dels=0.00;FS=3.710;HRun=0;HaplotypeScore=9.7606;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.214;QD=41.76;ReadPosRankSum=-0.378;SB=-4009.01	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:161,0:161:99:0,485,6723	0/0:97,0:97:99:0,292,4051	0/0:86,0:86:99:0,259,3591	1/1:0,57:57:99:2380,172,0	1/1:0,62:62:99:2589,187,0	1/1:0,86:86:99:3591,259,0	0/0:153,0:153:99:0,461,6389	0/0:155,0:155:99:0,467,6473	0/0:181,0:181:99:0,545,7559	0/0:152,0:152:99:0,458,6348	0/0:177,0:177:99:0,533,7392	0/0:175,0:175:99:0,527,7308	0/0:175,0:175:99:0,527,7308	0/0:164,0:164:99:0,494,6849	0/0:152,0:152:99:0,458,6348	0/0:137,0:137:99:0,412,5721	0/0:173,0:173:99:0,521,7225	0/0:170,0:170:99:0,512,7099	0/0:44,0:44:99:0,132,1837	0/0:133,0:133:99:0,400,5554
gi|293339394|gb|GU595196.1|	112459	.	C	T	16328.31	.	AC=14;AF=0.333;AN=42;BaseQRankSum=2.378;DP=2816;Dels=0.00;FS=14.173;HRun=0;HaplotypeScore=7.8561;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.229;QD=41.76;ReadPosRankSum=4.631;SB=-7475.12	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:163,0:163:99:0,491,6807	1/1:0,51:51:99:2130,154,0	1/1:0,57:57:99:2380,172,0	1/1:0,51:51:99:2130,154,0	1/1:0,56:56:99:2339,169,0	1/1:0,71:71:99:2965,214,0	0/0:150,0:150:99:0,452,6264	0/0:165,0:165:99:0,497,6890	0/0:205,0:205:99:0,617,8561	0/0:185,0:185:99:0,557,7726	0/0:176,0:176:99:0,530,7350	0/0:156,0:156:99:0,470,6515	0/0:189,0:189:99:0,569,7893	0/0:175,0:175:99:0,527,7308	0/0:189,0:189:99:0,569,7893	0/0:139,0:139:99:0,418,5805	0/0:159,0:159:99:0,479,6640	0/0:205,0:205:99:0,617,8561	1/1:0,28:28:84.28:1169,84,0	1/1:0,77:77:99:3216,232,0
gi|293339394|gb|GU595196.1|	112465	.	C	A	6890.47	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.207;DP=2723;Dels=0.00;FS=61.313;HRun=0;HaplotypeScore=7.3324;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.688;QD=41.76;ReadPosRankSum=3.547;SB=-2213.31	GT:AD:DP:GQ:PL	0/0:163,0:163:99:0,491,6807	0/0:147,0:147:99:0,442,6139	1/1:0,39:39:99:1629,117,0	1/1:0,50:50:99:2088,151,0	0/0:50,0:50:99:0,151,2088	0/0:56,0:56:99:0,169,2339	0/0:78,0:78:99:0,235,3257	0/0:147,0:147:99:0,442,6139	0/0:174,0:174:99:0,524,7266	0/0:205,0:205:99:0,617,8561	0/0:196,0:196:99:0,590,8185	0/0:166,0:166:99:0,500,6932	0/0:150,0:150:99:0,452,6264	0/0:181,0:181:99:0,545,7559	0/0:179,0:179:99:0,539,7475	0/0:191,0:191:99:0,575,7976	0/0:139,0:139:99:0,418,5805	0/0:154,0:154:99:0,464,6431	0/0:182,0:182:99:0,548,7600	1/1:0,20:20:60.20:835,60,0	1/1:0,56:56:99:2339,169,0
gi|293339394|gb|GU595196.1|	112489	.	G	T	4969.50	.	AC=4;AF=0.105;AN=38;BaseQRankSum=-0.667;DP=2645;Dels=0.00;FS=68.123;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.633;QD=41.76;ReadPosRankSum=0.398;SB=-1336.35	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:151,0:151:99:0,455,6306	./.	./.	0/0:45,0:45:99:0,135,1879	0/0:68,0:68:99:0,205,2840	0/0:83,0:83:99:0,250,3466	0/0:166,0:166:99:0,500,6932	0/0:165,0:165:99:0,497,6890	0/0:194,0:194:99:0,584,8102	0/0:191,0:191:99:0,575,7976	0/0:156,0:156:99:0,470,6515	0/0:150,0:150:99:0,452,6264	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:180,0:180:99:0,542,7517	0/0:153,0:153:99:0,461,6389	0/0:140,0:140:99:0,421,5846	0/0:182,0:182:99:0,548,7600	1/1:0,26:26:78.26:1086,78,0	1/1:0,93:93:99:3884,280,0
gi|293339394|gb|GU595196.1|	112492	.	G	A	6180.55	.	AC=8;AF=0.190;AN=42;BaseQRankSum=1.447;DP=2667;Dels=0.00;FS=87.626;HRun=1;HaplotypeScore=0.7142;InbreedingCoeff=0.9982;MQ=254.00;MQ0=0;MQRankSum=0.042;QD=41.76;ReadPosRankSum=0.621;SB=-1626.76	GT:AD:DP:GQ:PL	0/0:153,0:153:99:0,461,6389	0/0:162,0:162:99:0,488,6765	1/1:0,8:8:24.08:334,24,0	1/1:0,7:7:21.07:292,21,0	0/0:46,0:46:99:0,138,1921	0/0:66,0:66:99:0,199,2756	0/0:81,0:81:99:0,244,3383	0/0:165,0:165:99:0,497,6890	0/0:160,0:160:99:0,482,6682	0/0:194,0:194:99:0,584,8102	0/0:194,0:194:99:0,584,8102	0/0:149,0:149:99:0,448,6222	0/0:156,0:156:99:0,470,6515	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:182,0:182:99:0,548,7600	0/0:150,0:150:99:0,452,6264	0/0:145,0:145:99:0,436,6055	0/0:172,0:172:99:0,518,7183	1/1:0,29:29:87.29:1211,87,0	1/1:0,104:104:99:4343,313,0
gi|293339394|gb|GU595196.1|	112500	.	G	A	1249.84	.	AC=4;AF=0.095;AN=42;BaseQRankSum=-0.678;DP=2700;Dels=0.00;FS=6.618;HRun=1;HaplotypeScore=1.5236;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.657;QD=39.06;ReadPosRankSum=-4.009;SB=-500.70	GT:AD:DP:GQ:PL	0/0:158,0:158:99:0,476,6598	0/0:161,0:161:99:0,485,6723	1/1:0,15:15:45.15:626,45,0	1/1:0,17:17:51.17:710,51,0	0/0:42,0:42:99:0,126,1754	0/0:69,0:69:99:0,208,2881	0/0:78,0:78:99:0,235,3257	0/0:167,0:167:99:0,503,6974	0/0:158,0:158:99:0,476,6598	0/0:187,0:187:99:0,563,7809	0/0:189,0:189:99:0,569,7893	0/0:133,0:133:99:0,400,5554	0/0:145,0:145:99:0,436,6055	0/0:183,0:183:99:0,551,7642	0/0:168,0:168:99:0,506,7016	0/0:184,0:184:99:0,554,7684	0/0:152,0:152:99:0,458,6348	0/0:161,0:161:99:0,485,6723	0/0:177,0:177:99:0,533,7392	0/0:35,0:35:99:0,105,1462	0/0:121,0:121:99:0,364,5053
gi|293339394|gb|GU595196.1|	112543	.	T	C	2400.10	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.299;DP=2417;Dels=0.00;FS=11.622;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9921;MQ=254.00;MQ0=0;MQRankSum=1.980;QD=39.35;ReadPosRankSum=-10.262;SB=-913.28	GT:AD:DP:GQ:PL	0/0:157,0:157:99:0,473,6556	0/0:139,0:139:99:0,418,5805	1/1:0,5:5:15.05:209,15,0	1/1:0,9:9:27.09:376,27,0	1/1:0,7:7:21.07:292,21,0	1/1:0,10:10:30.10:418,30,0	1/1:0,9:9:27.09:376,27,0	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	0/0:175,0:175:99:0,527,7308	0/0:156,0:156:99:0,470,6515	0/0:157,0:157:99:0,473,6556	0/0:186,0:186:99:0,560,7767	0/0:154,0:154:99:0,464,6431	0/0:175,0:175:99:0,527,7308	0/0:197,0:197:99:0,593,8227	0/0:179,0:179:99:0,539,7475	0/0:186,0:186:99:0,560,7767	1/1:0,5:5:15.05:209,15,0	1/1:0,16:16:48.16:668,48,0
gi|293339394|gb|GU595196.1|	112546	.	T	C	1466.82	.	AC=10;AF=0.263;AN=38;BaseQRankSum=-0.836;DP=2380;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9519;MQ=254.00;MQ0=0;MQRankSum=-0.811;QD=38.60;ReadPosRankSum=-9.392;SB=-778.93	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:144,0:144:99:0,433,6013	./.	./.	1/1:0,8:8:24.08:334,24,0	1/1:0,10:10:30.10:418,30,0	1/1:0,12:12:36.12:501,36,0	0/0:157,0:157:99:0,473,6556	0/0:183,0:183:99:0,551,7642	0/0:158,0:158:99:0,476,6598	0/0:171,0:171:99:0,515,7141	0/0:159,0:159:99:0,479,6640	0/0:158,0:158:99:0,476,6598	0/0:182,0:182:99:0,548,7600	0/0:154,0:154:99:0,464,6431	0/0:166,0:166:99:0,500,6932	0/0:194,0:194:99:0,584,8102	0/0:173,0:173:99:0,521,7225	0/0:182,0:182:99:0,548,7600	1/1:0,1:1:3.01:42,3,0	1/1:0,7:7:21.07:292,21,0
gi|293339394|gb|GU595196.1|	112549	.	A	G	1321.09	.	AC=6;AF=0.176;AN=34;BaseQRankSum=1.296;DP=2360;Dels=0.00;FS=3.085;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9988;MQ=254.00;MQ0=0;MQRankSum=0.817;QD=38.86;ReadPosRankSum=-7.952;SB=-622.37	GT:AD:DP:GQ:PL	0/0:150,0:150:99:0,452,6264	0/0:150,0:150:99:0,452,6264	./.	./.	1/1:0,8:8:24.08:334,24,0	1/1:0,9:9:27.09:376,27,0	1/1:0,17:17:51.17:710,51,0	0/0:150,0:150:99:0,452,6264	0/0:181,0:181:99:0,545,7559	0/0:155,0:155:99:0,467,6473	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:186,0:186:99:0,560,7767	0/0:158,0:158:99:0,476,6598	0/0:167,0:167:99:0,503,6974	0/0:194,0:194:99:0,584,8102	0/0:165,0:165:99:0,497,6890	0/0:179,0:179:99:0,539,7475	./.	./.
gi|293339394|gb|GU595196.1|	112562	.	T	A	4301.33	.	AC=8;AF=0.190;AN=42;BaseQRankSum=0.388;DP=2588;Dels=0.00;FS=19.211;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.510;QD=41.76;ReadPosRankSum=-9.218;SB=-1586.89	GT:AD:DP:GQ:PL	0/0:146,0:146:99:0,439,6097	0/0:166,0:166:99:0,500,6932	1/1:0,29:29:87.29:1211,87,0	1/1:0,21:21:63.21:877,63,0	0/0:29,0:29:87.29:0,87,1211	0/0:40,0:40:99:0,120,1670	0/0:48,0:48:99:0,144,2004	0/0:168,0:168:99:0,506,7016	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	0/0:173,0:173:99:0,521,7225	0/0:164,0:164:99:0,494,6849	0/0:201,0:201:99:0,605,8394	0/0:154,0:154:99:0,464,6431	0/0:150,0:150:99:0,452,6264	0/0:193,0:193:99:0,581,8060	0/0:164,0:164:99:0,494,6849	0/0:184,0:184:99:0,554,7684	1/1:0,18:18:54.18:752,54,0	1/1:0,35:35:99:1462,105,0
gi|293339394|gb|GU595196.1|	112591	.	C	T	15242.54	.	AC=8;AF=0.190;AN=42;BaseQRankSum=1.025;DP=3065;Dels=0.00;FS=19.919;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.056;QD=41.76;ReadPosRankSum=3.606;SB=-6347.59	GT:AD:DP:GQ:PL	0/0:156,0:156:99:0,470,6515	0/0:178,0:178:99:0,536,7433	1/1:0,83:83:99:3466,250,0	1/1:0,87:87:99:3633,262,0	0/0:79,0:79:99:0,238,3299	0/0:107,0:107:99:0,322,4468	0/0:123,0:123:99:0,370,5137	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:159,0:159:99:0,479,6640	0/0:182,0:182:99:0,548,7600	0/0:149,0:149:99:0,448,6222	0/0:211,0:211:99:0,635,8811	0/0:170,0:170:99:0,512,7099	0/0:128,0:128:99:0,385,5345	0/0:176,0:176:99:0,530,7350	0/0:186,0:186:99:0,560,7767	0/0:180,0:180:99:0,542,7517	1/1:0,55:55:99:2297,166,0	1/1:0,140:140:99:5846,421,0
gi|293339394|gb|GU595196.1|	112618	.	T	C	28898.17	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-0.412;DP=3075;Dels=0.00;FS=40.785;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.386;QD=41.76;ReadPosRankSum=4.544;SB=-12319.32	GT:AD:DP:GQ:PL	0/0:166,0:166:99:0,500,6932	0/0:167,0:167:99:0,503,6974	1/1:0,91:91:99:3800,274,0	1/1:0,93:93:99:3884,280,0	1/1:0,65:65:99:2714,196,0	1/1:0,98:98:99:4093,295,0	1/1:0,146:146:99:6097,439,0	0/0:176,0:176:99:0,530,7350	0/0:153,0:153:99:0,461,6389	0/0:180,0:180:99:0,542,7517	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:138,0:138:99:0,415,5763	0/0:178,0:178:99:0,536,7433	0/0:171,0:171:99:0,515,7141	0/0:166,0:166:99:0,500,6932	0/0:189,0:189:99:0,569,7893	0/0:173,0:173:99:0,521,7225	0/0:174,0:174:99:0,524,7266	1/1:0,55:55:99:2297,166,0	1/1:0,144:144:99:6013,433,0
gi|293339394|gb|GU595196.1|	112644	.	C	T	1232.23	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.069;DP=2773;Dels=0.00;FS=5.458;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.573;QD=39.75;ReadPosRankSum=-4.505;SB=-542.90	GT:AD:DP:GQ:PL	0/0:176,0:176:99:0,530,7350	0/0:167,0:167:99:0,503,6974	0/0:59,0:59:99:0,178,2464	1/1:0,31:31:93.31:1295,93,0	0/0:20,0:20:60.20:0,60,835	0/0:37,0:37:99:0,111,1545	0/0:73,0:73:99:0,220,3049	0/0:169,0:169:99:0,509,7057	0/0:186,0:186:99:0,560,7767	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:188,0:188:99:0,566,7851	0/0:155,0:155:99:0,467,6473	0/0:170,0:170:99:0,512,7099	0/0:162,0:162:99:0,488,6765	0/0:181,0:181:99:0,545,7559	0/0:188,0:188:99:0,566,7851	0/0:155,0:155:99:0,467,6473	0/0:177,0:177:99:0,533,7392	0/0:45,0:45:99:0,135,1879	0/0:87,0:87:99:0,262,3633
gi|293339394|gb|GU595196.1|	112657	.	A	G	7099.28	.	AC=12;AF=0.300;AN=40;BaseQRankSum=1.289;DP=2575;Dels=0.00;FS=14.088;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9993;MQ=254.00;MQ0=0;MQRankSum=0.729;QD=41.76;ReadPosRankSum=-4.324;SB=-3127.20	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:162,0:162:99:0,488,6765	1/1:0,34:34:99:1420,102,0	./.	1/1:0,9:9:27.09:376,27,0	1/1:0,8:8:24.08:334,24,0	1/1:0,30:30:90.30:1253,90,0	0/0:175,0:175:99:0,527,7308	0/0:193,0:193:99:0,581,8060	0/0:163,0:163:99:0,491,6807	0/0:188,0:188:99:0,566,7851	0/0:177,0:177:99:0,533,7392	0/0:166,0:166:99:0,500,6932	0/0:163,0:163:99:0,491,6807	0/0:169,0:169:99:0,509,7057	0/0:167,0:167:99:0,503,6974	0/0:180,0:180:99:0,542,7517	0/0:154,0:154:99:0,464,6431	0/0:178,0:178:99:0,536,7433	1/1:0,32:32:96.32:1336,96,0	1/1:0,57:57:99:2380,172,0
gi|293339394|gb|GU595196.1|	112665	.	T	C	3224.61	.	AC=10;AF=0.263;AN=38;BaseQRankSum=-0.351;DP=2470;Dels=0.00;FS=3.039;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9250;MQ=254.00;MQ0=0;MQRankSum=0.478;QD=40.31;ReadPosRankSum=-3.417;SB=-1577.48	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	1/1:0,18:18:54.18:752,54,0	./.	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	./.	0/0:169,0:169:99:0,509,7057	0/0:190,0:190:99:0,572,7934	0/0:176,0:176:99:0,530,7350	0/0:176,0:176:99:0,530,7350	0/0:180,0:180:99:0,542,7517	0/0:165,0:165:99:0,497,6890	0/0:167,0:167:99:0,503,6974	0/0:160,0:160:99:0,482,6682	0/0:151,0:151:99:0,455,6306	0/0:178,0:178:99:0,536,7433	0/0:166,0:166:99:0,500,6932	0/0:180,0:180:99:0,542,7517	1/1:0,22:22:66.22:919,66,0	1/1:0,37:37:99:1545,111,0
gi|293339394|gb|GU595196.1|	112681	.	G	A	2841.26	.	AC=10;AF=0.263;AN=38;BaseQRankSum=-0.304;DP=2394;Dels=0.00;FS=9.308;HRun=1;HaplotypeScore=0.4210;InbreedingCoeff=0.9839;MQ=254.00;MQ0=0;MQRankSum=-0.598;QD=40.02;ReadPosRankSum=-4.351;SB=-1205.32	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:162,0:162:99:0,488,6765	./.	1/1:0,4:4:12.04:167,12,0	1/1:0,18:18:54.18:752,54,0	1/1:0,14:14:42.14:585,42,0	1/1:0,31:31:93.31:1295,93,0	0/0:159,0:159:99:0,479,6640	0/0:167,0:167:99:0,503,6974	0/0:192,0:192:99:0,578,8018	0/0:161,0:161:99:0,485,6723	0/0:173,0:173:99:0,521,7225	0/0:157,0:157:99:0,473,6556	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:152,0:152:99:0,458,6348	0/0:159,0:159:99:0,479,6640	0/0:159,0:159:99:0,479,6640	0/0:167,0:167:99:0,503,6974	./.	1/1:0,4:4:12.04:167,12,0
gi|293339394|gb|GU595196.1|	112686	.	C	G	709.19	.	AC=4;AF=0.105;AN=38;BaseQRankSum=-0.147;DP=2415;Dels=0.00;FS=7.811;HRun=1;HaplotypeScore=0.9999;InbreedingCoeff=0.9988;MQ=254.00;MQ0=0;MQRankSum=1.137;QD=37.33;ReadPosRankSum=-1.739;SB=-246.85	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:164,0:164:99:0,494,6849	./.	1/1:0,8:8:24.08:334,24,0	0/0:23,0:23:69.23:0,69,960	0/0:20,0:20:60.20:0,60,835	0/0:36,0:36:99:0,108,1503	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:189,0:189:99:0,569,7893	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:177,0:177:99:0,533,7392	0/0:153,0:153:99:0,461,6389	0/0:150,0:150:99:0,452,6264	0/0:162,0:162:99:0,488,6765	0/0:169,0:169:99:0,509,7057	./.	1/1:0,11:11:33.11:459,33,0
gi|293339394|gb|GU595196.1|	112702	.	C	T	522.75	.	AC=2;AF=0.050;AN=40;BaseQRankSum=0.736;DP=2514;Dels=0.00;FS=12.465;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.190;QD=37.34;ReadPosRankSum=-2.399;SB=-125.16	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	1/1:0,14:14:42.14:585,42,0	0/0:19,0:19:57.19:0,57,793	0/0:37,0:37:99:0,111,1545	0/0:40,0:40:99:0,120,1670	0/0:55,0:55:99:0,166,2297	0/0:173,0:173:99:0,521,7225	0/0:159,0:159:99:0,479,6640	0/0:190,0:190:99:0,572,7934	0/0:175,0:175:99:0,527,7308	0/0:159,0:159:99:0,479,6640	0/0:160,0:160:99:0,482,6682	0/0:172,0:172:99:0,518,7183	0/0:166,0:166:99:0,500,6932	0/0:135,0:135:99:0,406,5638	0/0:151,0:151:99:0,455,6306	0/0:168,0:168:99:0,506,7016	0/0:168,0:168:99:0,506,7016	./.	0/0:41,0:41:99:0,123,1712
gi|293339394|gb|GU595196.1|	112711	.	C	T	232.13	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.294;DP=2633;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.9999;InbreedingCoeff=0.9959;MQ=254.00;MQ0=0;MQRankSum=-0.323;QD=33.16;ReadPosRankSum=-3.442;SB=-119.58	GT:AD:DP:GQ:PL	0/0:184,0:184:99:0,554,7684	0/0:162,0:162:99:0,488,6765	0/0:26,0:26:78.26:0,78,1086	0/0:27,0:27:81.27:0,81,1128	0/0:44,0:44:99:0,132,1837	0/0:47,0:47:99:0,141,1963	0/0:69,0:69:99:0,208,2881	0/0:176,0:176:99:0,530,7350	0/0:160,0:160:99:0,482,6682	0/0:181,0:181:99:0,545,7559	0/0:178,0:178:99:0,536,7433	0/0:158,0:158:99:0,476,6598	0/0:153,0:153:99:0,461,6389	0/0:177,0:177:99:0,533,7392	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:161,0:161:99:0,485,6723	0/0:165,0:165:99:0,497,6890	0/0:177,0:177:99:0,533,7392	1/1:0,7:7:21.07:292,21,0	0/0:66,0:66:99:0,199,2756
gi|293339394|gb|GU595196.1|	112718	.	G	A	13530.37	.	AC=14;AF=0.333;AN=42;BaseQRankSum=1.589;DP=2665;Dels=0.00;FS=23.576;HRun=0;HaplotypeScore=0.3333;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.440;QD=41.76;ReadPosRankSum=1.038;SB=-5721.11	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:153,0:153:99:0,461,6389	1/1:0,35:35:99:1462,105,0	1/1:0,33:33:99:1378,99,0	1/1:0,46:46:99:1921,138,0	1/1:0,57:57:99:2380,172,0	1/1:0,68:68:99:2840,205,0	0/0:184,0:184:99:0,554,7684	0/0:155,0:155:99:0,467,6473	0/0:174,0:174:99:0,524,7266	0/0:176,0:176:99:0,530,7350	0/0:153,0:153:99:0,461,6389	0/0:151,0:151:99:0,455,6306	0/0:198,0:198:99:0,596,8269	0/0:164,0:164:99:0,494,6849	0/0:159,0:159:99:0,479,6640	0/0:164,0:164:99:0,494,6849	0/0:164,0:164:99:0,494,6849	0/0:169,0:169:99:0,509,7057	1/1:0,16:16:48.16:668,48,0	1/1:0,69:69:99:2881,208,0
gi|293339394|gb|GU595196.1|	112755	.	C	A	1899.55	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.696;DP=2596;Dels=0.00;FS=39.865;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.457;QD=39.57;ReadPosRankSum=-6.034;SB=-417.56	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:181,0:181:99:0,545,7559	0/0:26,0:26:78.26:0,78,1086	0/0:23,0:23:69.23:0,69,960	1/1:0,12:12:36.12:501,36,0	1/1:0,18:18:54.18:752,54,0	1/1:0,18:18:54.18:752,54,0	0/0:167,0:167:99:0,503,6974	0/0:196,0:196:99:0,590,8185	0/0:158,0:158:99:0,476,6598	0/0:176,0:176:99:0,530,7350	0/0:145,0:145:99:0,436,6055	0/0:164,0:164:99:0,494,6849	0/0:182,0:182:99:0,548,7600	0/0:175,0:175:99:0,527,7308	0/0:182,0:182:99:0,548,7600	0/0:190,0:190:99:0,572,7934	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	0/0:21,0:21:63.21:0,63,877	0/0:48,0:48:99:0,144,2004
gi|293339394|gb|GU595196.1|	112767	.	T	G	2651.64	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.566;DP=2454;Dels=0.00;FS=18.987;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.9865;MQ=254.00;MQ0=0;MQRankSum=0.031;QD=39.58;ReadPosRankSum=-8.036;SB=-915.67	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:174,0:174:99:0,524,7266	1/1:0,9:9:27.09:376,27,0	1/1:0,8:8:24.08:334,24,0	1/1:0,5:5:15.05:209,15,0	1/1:0,4:4:12.04:167,12,0	1/1:0,11:11:33.11:459,33,0	0/0:151,0:151:99:0,455,6306	0/0:203,0:203:99:0,611,8477	0/0:152,0:152:99:0,458,6348	0/0:166,0:166:99:0,500,6932	0/0:141,0:141:99:0,424,5888	0/0:180,0:180:99:0,542,7517	0/0:167,0:167:99:0,503,6974	0/0:171,0:171:99:0,515,7141	0/0:176,0:176:99:0,530,7350	0/0:192,0:192:99:0,578,8018	0/0:178,0:178:99:0,536,7433	0/0:168,0:168:99:0,506,7016	1/1:0,5:5:15.05:209,15,0	1/1:0,25:25:75.25:1044,75,0
gi|293339394|gb|GU595196.1|	112768	.	G	A	2985.13	.	AC=14;AF=0.333;AN=42;BaseQRankSum=1.066;DP=2463;Dels=0.00;FS=17.343;HRun=0;HaplotypeScore=0.3809;InbreedingCoeff=0.9899;MQ=254.00;MQ0=0;MQRankSum=-0.746;QD=39.80;ReadPosRankSum=-9.487;SB=-1082.98	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	1/1:0,12:12:36.12:501,36,0	1/1:0,9:9:27.09:376,27,0	1/1:0,5:5:15.05:209,15,0	1/1:0,5:5:15.05:209,15,0	1/1:0,11:11:33.11:459,33,0	0/0:152,0:152:99:0,458,6348	0/0:198,0:198:99:0,596,8269	0/0:152,0:152:99:0,458,6348	0/0:170,0:170:99:0,512,7099	0/0:145,0:145:99:0,436,6055	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	0/0:173,0:173:99:0,521,7225	0/0:178,0:178:99:0,536,7433	0/0:193,0:193:99:0,581,8060	0/0:179,0:179:99:0,539,7475	0/0:167,0:167:99:0,503,6974	1/1:0,5:5:15.05:209,15,0	1/1:0,28:28:84.28:1169,84,0
gi|293339394|gb|GU595196.1|	112778	.	C	T	2594.80	.	AC=8;AF=0.190;AN=42;BaseQRankSum=-1.355;DP=2512;Dels=0.00;FS=8.783;HRun=1;HaplotypeScore=0.9999;InbreedingCoeff=0.9996;MQ=254.00;MQ0=0;MQRankSum=-0.773;QD=39.92;ReadPosRankSum=-7.701;SB=-1163.44	GT:AD:DP:GQ:PL	0/0:168,0:168:99:0,506,7016	0/0:173,0:173:99:0,521,7225	1/1:0,11:11:33.11:459,33,0	1/1:0,13:13:39.13:543,39,0	0/0:15,0:15:45.15:0,45,626	0/0:18,0:18:54.18:0,54,752	0/0:24,0:24:72.24:0,72,1002	0/0:157,0:157:99:0,473,6556	0/0:172,0:172:99:0,518,7183	0/0:158,0:158:99:0,476,6598	0/0:166,0:166:99:0,500,6932	0/0:146,0:146:99:0,439,6097	0/0:188,0:188:99:0,566,7851	0/0:165,0:165:99:0,497,6890	0/0:166,0:166:99:0,500,6932	0/0:182,0:182:99:0,548,7600	0/0:201,0:201:99:0,605,8394	0/0:175,0:175:99:0,527,7308	0/0:173,0:173:99:0,521,7225	1/1:0,9:9:27.09:376,27,0	1/1:0,32:32:96.32:1336,96,0
gi|293339394|gb|GU595196.1|	112837	.	G	A	7057.52	.	AC=2;AF=0.048;AN=42;BaseQRankSum=0.005;DP=2909;Dels=0.00;FS=41.740;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-1.588;QD=41.76;ReadPosRankSum=-0.004;SB=-2588.04	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:154,0:154:99:0,464,6431	0/0:93,0:93:99:0,280,3884	0/0:97,0:97:99:0,292,4051	0/0:27,0:27:81.27:0,81,1128	0/0:34,0:34:99:0,102,1420	0/0:52,0:52:99:0,157,2172	0/0:175,0:175:99:0,527,7308	0/0:183,0:183:99:0,551,7642	0/0:187,0:187:99:0,563,7809	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:151,0:151:99:0,455,6306	0/0:179,0:179:99:0,539,7475	0/0:180,0:180:99:0,542,7517	0/0:170,0:170:99:0,512,7099	0/0:52,0:52:99:0,157,2172	1/1:0,169:169:99:7057,509,0
gi|293339394|gb|GU595196.1|	112877	.	T	G	13822.69	.	AC=14;AF=0.333;AN=42;BaseQRankSum=0.070;DP=2691;Dels=0.00;FS=3.858;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.263;QD=41.76;ReadPosRankSum=4.763;SB=-6598.15	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:147,0:147:99:0,442,6139	1/1:0,57:57:99:2380,172,0	1/1:0,61:61:99:2547,184,0	1/1:0,19:19:57.19:793,57,0	1/1:0,20:20:60.20:835,60,0	1/1:0,45:45:99:1879,135,0	0/0:186,0:186:99:0,560,7767	0/0:169,0:169:99:0,509,7057	0/0:168,0:168:99:0,506,7016	0/0:181,0:181:99:0,545,7559	0/0:153,0:153:99:0,461,6389	0/0:194,0:194:99:0,584,8102	0/0:162,0:162:99:0,488,6765	0/0:159,0:159:99:0,479,6640	0/0:166,0:166:99:0,500,6932	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:160,0:160:99:0,482,6682	1/1:0,38:38:99:1587,114,0	1/1:0,91:91:99:3800,274,0
gi|293339394|gb|GU595196.1|	112897	.	T	C	5428.86	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-0.883;DP=2491;Dels=0.00;FS=2.296;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9967;MQ=254.00;MQ0=0;MQRankSum=-1.347;QD=41.76;ReadPosRankSum=-8.723;SB=-2546.72	GT:AD:DP:GQ:PL	0/0:164,0:164:99:0,494,6849	0/0:152,0:152:99:0,458,6348	1/1:0,23:23:69.23:960,69,0	1/1:0,27:27:81.27:1128,81,0	1/1:0,5:5:15.05:209,15,0	1/1:0,12:12:36.12:501,36,0	1/1:0,19:19:57.19:793,57,0	0/0:175,0:175:99:0,527,7308	0/0:179,0:179:99:0,539,7475	0/0:154,0:154:99:0,464,6431	0/0:188,0:188:99:0,566,7851	0/0:162,0:162:99:0,488,6765	0/0:178,0:178:99:0,536,7433	0/0:161,0:161:99:0,485,6723	0/0:154,0:154:99:0,464,6431	0/0:159,0:159:99:0,479,6640	0/0:183,0:183:99:0,551,7642	0/0:181,0:181:99:0,545,7559	0/0:171,0:171:99:0,515,7141	1/1:0,16:16:48.16:668,48,0	1/1:0,28:28:84.28:1169,84,0
gi|293339394|gb|GU595196.1|	112921	.	A	G	260.51	.	AC=4;AF=0.125;AN=32;BaseQRankSum=0.826;DP=2384;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9583;MQ=254.00;MQ0=0;MQRankSum=-0.608;QD=32.56;ReadPosRankSum=-4.779;SB=-158.11	GT:AD:DP:GQ:PL	0/0:162,0:162:99:0,488,6765	0/0:158,0:158:99:0,476,6598	./.	1/1:0,5:5:15.05:209,15,0	./.	./.	./.	0/0:156,0:156:99:0,470,6515	0/0:190,0:190:99:0,572,7934	0/0:153,0:153:99:0,461,6389	0/0:190,0:190:99:0,572,7934	0/0:158,0:158:99:0,476,6598	0/0:170,0:170:99:0,512,7099	0/0:170,0:170:99:0,512,7099	0/0:168,0:168:99:0,506,7016	0/0:170,0:170:99:0,512,7099	0/0:180,0:180:99:0,542,7517	0/0:177,0:177:99:0,533,7392	0/0:174,0:174:99:0,524,7266	./.	1/1:0,3:3:9.03:125,9,0
gi|293339394|gb|GU595196.1|	112933	.	T	C	4551.90	.	AC=8;AF=0.222;AN=36;BaseQRankSum=0.080;DP=2458;Dels=0.00;FS=10.196;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.269;QD=41.76;ReadPosRankSum=-8.959;SB=-1920.84	GT:AD:DP:GQ:PL	0/0:165,0:165:99:0,497,6890	0/0:150,0:150:99:0,452,6264	1/1:0,23:23:69.23:960,69,0	1/1:0,30:30:90.30:1253,90,0	./.	./.	./.	0/0:157,0:157:99:0,473,6556	0/0:176,0:176:99:0,530,7350	0/0:167,0:167:99:0,503,6974	0/0:191,0:191:99:0,575,7976	0/0:151,0:151:99:0,455,6306	0/0:181,0:181:99:0,545,7559	0/0:162,0:162:99:0,488,6765	0/0:163,0:163:99:0,491,6807	0/0:167,0:167:99:0,503,6974	0/0:170,0:170:99:0,512,7099	0/0:174,0:174:99:0,524,7266	0/0:175,0:175:99:0,527,7308	1/1:0,15:15:45.15:626,45,0	1/1:0,41:41:99:1712,123,0
gi|293339394|gb|GU595196.1|	112992	.	T	C	743.41	.	AC=6;AF=0.167;AN=36;BaseQRankSum=-1.063;DP=2408;Dels=0.00;FS=9.411;HRun=0;HaplotypeScore=0.9443;InbreedingCoeff=0.9292;MQ=254.00;MQ0=0;MQRankSum=0.230;QD=37.17;ReadPosRankSum=-6.488;SB=-237.74	GT:AD:DP:GQ:PL	0/0:179,0:179:99:0,539,7475	0/0:161,0:161:99:0,485,6723	1/1:0,8:8:24.08:334,24,0	1/1:0,11:11:33.11:459,33,0	./.	./.	./.	0/0:146,0:146:99:0,439,6097	0/0:178,0:178:99:0,536,7433	0/0:170,0:170:99:0,512,7099	0/0:185,0:185:99:0,557,7726	0/0:32,0:32:96.32:0,96,1336	0/0:175,0:175:99:0,527,7308	0/0:158,0:158:99:0,476,6598	0/0:167,0:167:99:0,503,6974	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	0/0:140,0:140:99:0,421,5846	1/1:0,1:1:3.01:42,3,0	0/0:190,0:190:99:0,572,7934
gi|293339394|gb|GU595196.1|	112996	.	A	G,T	94.54	.	AC=2,1;AF=0.063,0.031;AN=32;BaseQRankSum=-0.090;DP=2406;Dels=0.00;FS=0.000;HaplotypeScore=0.1250;InbreedingCoeff=0.8915;MQ=254.00;MQ0=0;MQRankSum=-0.781;QD=3.94;ReadPosRankSum=-4.096;SB=-39.45	GT:AD:DP:GQ:PL	0/0:181,0,0:181:99:0,545,7559,545,7559,7559	0/0:163,0,0:163:99:0,491,6807,491,6807,6807	1/1:0,2,0:2:6.02:84,6,0,84,6,84	./.	./.	./.	./.	0/0:149,0,0:149:99:0,448,6222,448,6222,6222	0/0:175,0,0:175:99:0,527,7308,527,7308,7308	0/0:176,0,0:176:99:0,530,7350,530,7350,7350	0/0:185,0,0:185:99:0,557,7726,557,7726,7726	0/2:18,0,4:22:99:101,155,853,0,698,685	0/0:179,0,0:179:99:0,539,7475,539,7475,7475	0/0:161,0,0:161:99:0,485,6723,485,6723,6723	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:174,0,0:174:99:0,524,7266,524,7266,7266	0/0:169,0,0:169:99:0,509,7057,509,7057,7057	0/0:137,0,0:137:99:0,412,5721,412,5721,5721	./.	0/0:190,0,0:190:99:0,572,7934,572,7934,7934
gi|293339394|gb|GU595196.1|	112997	.	C	G,T	255.29	.	AC=1,4;AF=0.029,0.118;AN=34;BaseQRankSum=0.003;DP=2385;Dels=0.00;FS=5.449;HaplotypeScore=0.2941;InbreedingCoeff=0.9401;MQ=254.00;MQ0=0;MQRankSum=0.889;QD=9.12;ReadPosRankSum=-5.668;SB=-113.94	GT:AD:DP:GQ:PL	0/0:176,0,0:176:99:0,530,7350,530,7350,7350	0/0:159,0,0:159:99:0,479,6640,479,6640,6640	2/2:0,0,2:2:6.02:84,84,84,6,6,0	2/2:0,0,5:5:15.05:209,209,209,15,15,0	./.	./.	./.	0/0:143,0,0:143:99:0,430,5972,430,5972,5972	0/0:172,0,0:172:99:0,518,7183,518,7183,7183	0/0:173,0,0:173:99:0,521,7225,521,7225,7225	0/0:185,0,0:185:99:0,557,7726,557,7726,7726	0/1:16,5,0:21:99:146,0,605,194,620,814	0/0:178,0,0:178:99:0,536,7433,536,7433,7433	0/0:158,0,0:158:99:0,476,6598,476,6598,6598	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	0/0:171,0,0:171:99:0,515,7141,515,7141,7141	0/0:177,0,0:177:99:0,533,7392,533,7392,7392	0/0:167,0,0:167:99:0,503,6974,503,6974,6974	0/0:137,0,0:137:99:0,412,5721,412,5721,5721	./.	0/0:190,0,0:190:99:0,572,7934,572,7934,7934
gi|293339394|gb|GU595196.1|	112999	.	G	T	296.87	.	AC=1;AF=0.028;AN=36;BaseQRankSum=1.415;DP=2418;Dels=0.00;FS=11.989;HRun=2;HaplotypeScore=0.8888;InbreedingCoeff=-0.0347;MQ=254.00;MQ0=0;MQRankSum=-0.086;QD=11.42;ReadPosRankSum=-4.967;SB=-53.36	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:161,0:161:99:0,485,6723	0/0:7,0:7:21.07:0,21,292	0/0:10,0:10:30.10:0,30,418	./.	./.	./.	0/0:145,0:145:99:0,436,6055	0/0:167,0:167:99:0,503,6974	0/0:173,0:173:99:0,521,7225	0/0:187,0:187:99:0,563,7809	0/1:16,10:26:99:339,0,590	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:175,0:175:99:0,527,7308	0/0:171,0:171:99:0,515,7141	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:138,0:138:99:0,415,5763	0/0:2,0:2:6.02:0,6,84	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	113000	.	T	G	168.52	.	AC=1;AF=0.028;AN=36;BaseQRankSum=1.734;DP=2422;Dels=0.00;FS=11.662;HRun=1;HaplotypeScore=1.0554;InbreedingCoeff=-0.0289;MQ=254.00;MQ0=0;MQRankSum=0.455;QD=6.24;ReadPosRankSum=-4.416;SB=-5.58	GT:AD:DP:GQ:PL	0/0:172,0:172:99:0,518,7183	0/0:162,0:162:99:0,488,6765	0/0:9,0:9:27.09:0,27,376	0/0:14,0:14:42.14:0,42,585	./.	./.	./.	0/0:145,0:145:99:0,436,6055	0/0:162,0:162:99:0,488,6765	0/0:174,0:174:99:0,524,7266	0/0:190,0:190:99:0,572,7934	0/1:20,7:27:99:211,0,754	0/0:175,0:175:99:0,527,7308	0/0:172,0:172:99:0,518,7183	0/0:174,0:174:99:0,524,7266	0/0:170,0:170:99:0,512,7099	0/0:173,0:173:99:0,521,7225	0/0:165,0:165:99:0,497,6890	0/0:134,0:134:99:0,403,5596	0/0:7,0:7:21.07:0,21,292	0/0:197,0:197:99:0,593,8227
gi|293339394|gb|GU595196.1|	113016	.	C	T	6514.63	.	AC=6;AF=0.167;AN=36;BaseQRankSum=2.080;DP=2602;Dels=0.00;FS=3.878;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.924;QD=41.76;ReadPosRankSum=-4.630;SB=-3048.52	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:163,0:163:99:0,491,6807	1/1:0,46:46:99:1921,138,0	1/1:0,79:79:99:3299,238,0	./.	./.	./.	0/0:155,0:155:99:0,467,6473	0/0:167,0:167:99:0,503,6974	0/0:181,0:181:99:0,545,7559	0/0:185,0:185:99:0,557,7726	0/0:79,0:79:99:0,238,3299	0/0:172,0:172:99:0,518,7183	0/0:154,0:154:99:0,464,6431	0/0:190,0:190:99:0,572,7934	0/0:157,0:157:99:0,473,6556	0/0:165,0:165:99:0,497,6890	0/0:168,0:168:99:0,506,7016	0/0:146,0:146:99:0,439,6097	1/1:0,31:31:93.31:1295,93,0	0/0:190,0:190:99:0,572,7934
gi|293339394|gb|GU595196.1|	113048	.	C	G	289.02	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.129;DP=2827;Dels=0.00;FS=23.948;HRun=2;HaplotypeScore=0.0000;InbreedingCoeff=0.8843;MQ=254.00;MQ0=0;MQRankSum=-0.127;QD=32.11;ReadPosRankSum=-5.103;SB=-0.02	GT:AD:DP:GQ:PL	0/0:171,0:171:99:0,515,7141	0/0:168,0:168:99:0,506,7016	0/0:100,0:100:99:0,301,4176	0/0:161,0:161:99:0,485,6723	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	1/1:0,6:6:18.06:251,18,0	0/0:175,0:175:99:0,527,7308	0/0:158,0:158:99:0,476,6598	0/0:154,0:154:99:0,464,6431	0/0:176,0:176:99:0,530,7350	0/0:160,0:160:99:0,482,6682	0/0:160,0:160:99:0,482,6682	0/0:157,0:157:99:0,473,6556	0/0:179,0:179:99:0,539,7475	0/0:168,0:168:99:0,506,7016	0/0:164,0:164:99:0,494,6849	0/0:152,0:152:99:0,458,6348	0/0:159,0:159:99:0,479,6640	0/0:86,0:86:99:0,259,3591	0/0:170,0:170:99:0,512,7099
gi|293339394|gb|GU595196.1|	113049	.	A	T	289.02	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.077;DP=2817;Dels=0.00;FS=23.899;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.8843;MQ=254.00;MQ0=0;MQRankSum=1.387;QD=32.11;ReadPosRankSum=-4.650;SB=-0.02	GT:AD:DP:GQ:PL	0/0:173,0:173:99:0,521,7225	0/0:168,0:168:99:0,506,7016	0/0:98,0:98:99:0,295,4093	0/0:160,0:160:99:0,482,6682	1/1:0,1:1:3.01:42,3,0	1/1:0,2:2:6.02:84,6,0	1/1:0,6:6:18.06:251,18,0	0/0:173,0:173:99:0,521,7225	0/0:156,0:156:99:0,470,6515	0/0:154,0:154:99:0,464,6431	0/0:175,0:175:99:0,527,7308	0/0:154,0:154:99:0,464,6431	0/0:161,0:161:99:0,485,6723	0/0:157,0:157:99:0,473,6556	0/0:175,0:175:99:0,527,7308	0/0:168,0:168:99:0,506,7016	0/0:165,0:165:99:0,497,6890	0/0:150,0:150:99:0,452,6264	0/0:163,0:163:99:0,491,6807	0/0:87,0:87:99:0,262,3633	0/0:171,0:171:99:0,515,7141
gi|293339394|gb|GU595196.1|	113100	.	C	T	6264.07	.	AC=6;AF=0.143;AN=42;BaseQRankSum=1.744;DP=2922;Dels=0.00;FS=297.453;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.775;QD=41.76;ReadPosRankSum=0.225;SB=-250.58	GT:AD:DP:GQ:PL	0/0:177,0:177:99:0,533,7392	0/0:151,0:151:99:0,455,6306	0/0:88,0:88:99:0,265,3675	0/0:124,0:124:99:0,373,5178	1/1:0,37:37:99:1545,111,0	1/1:0,38:38:99:1587,114,0	1/1:0,75:75:99:3132,226,0	0/0:164,0:164:99:0,494,6849	0/0:177,0:177:99:0,533,7392	0/0:186,0:186:99:0,560,7767	0/0:179,0:179:99:0,539,7475	0/0:162,0:162:99:0,488,6765	0/0:158,0:158:99:0,476,6598	0/0:156,0:156:99:0,470,6515	0/0:180,0:180:99:0,542,7517	0/0:172,0:172:99:0,518,7183	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:160,0:160:99:0,482,6682	0/0:59,0:59:99:0,178,2464	0/0:148,0:148:99:0,445,6181
gi|293339394|gb|GU595196.1|	113175	.	A	G	21506.59	.	AC=14;AF=0.333;AN=42;BaseQRankSum=-0.008;DP=2890;Dels=0.00;FS=155.133;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.320;QD=41.76;ReadPosRankSum=-1.898;SB=-6180.55	GT:AD:DP:GQ:PL	0/0:167,0:167:99:0,503,6974	0/0:159,0:159:99:0,479,6640	1/1:0,82:82:99:3424,247,0	1/1:0,119:119:99:4969,358,0	1/1:0,14:14:42.14:585,42,0	1/1:0,15:15:45.15:626,45,0	1/1:0,34:34:99:1420,102,0	0/0:157,0:157:99:0,473,6556	0/0:184,0:184:99:0,554,7684	0/0:177,0:177:99:0,533,7392	0/0:169,0:169:99:0,509,7057	0/0:155,0:155:99:0,467,6473	0/0:164,0:164:99:0,494,6849	0/0:157,0:157:99:0,473,6556	0/0:194,0:194:99:0,584,8102	0/0:179,0:179:99:0,539,7475	0/0:172,0:172:99:0,518,7183	0/0:181,0:181:99:0,545,7559	0/0:160,0:160:99:0,482,6682	1/1:0,62:62:99:2589,187,0	1/1:0,189:189:99:7893,569,0
gi|293339394|gb|GU595196.1|	113190	.	G	A	619.43	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.308;DP=2851;Dels=0.00;FS=41.999;HRun=3;HaplotypeScore=0.0000;InbreedingCoeff=0.9078;MQ=254.00;MQ0=0;MQRankSum=-0.232;QD=36.44;ReadPosRankSum=-5.688;SB=-0.02	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:177,0:177:99:0,533,7392	0/0:97,0:97:99:0,292,4051	0/0:142,0:142:99:0,427,5930	1/1:0,1:1:3.01:42,3,0	1/1:0,3:3:9.03:125,9,0	1/1:0,13:13:39.13:543,39,0	0/0:163,0:163:99:0,491,6807	0/0:162,0:162:99:0,488,6765	0/0:175,0:175:99:0,527,7308	0/0:170,0:170:99:0,512,7099	0/0:145,0:145:99:0,436,6055	0/0:161,0:161:99:0,485,6723	0/0:161,0:161:99:0,485,6723	0/0:174,0:174:99:0,524,7266	0/0:172,0:172:99:0,518,7183	0/0:169,0:169:99:0,509,7057	0/0:178,0:178:99:0,536,7433	0/0:159,0:159:99:0,479,6640	0/0:59,0:59:99:0,178,2464	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	113210	.	C	T	366.26	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.103;DP=2848;Dels=0.00;FS=19.090;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9491;MQ=254.00;MQ0=0;MQRankSum=-0.571;QD=33.30;ReadPosRankSum=-0.415;SB=-40.30	GT:AD:DP:GQ:PL	0/0:170,0:170:99:0,512,7099	0/0:164,0:164:99:0,494,6849	0/0:101,0:101:99:0,304,4218	0/0:149,0:149:99:0,448,6222	1/1:0,5:5:15.05:209,15,0	1/1:0,3:3:9.03:125,9,0	1/1:0,3:3:9.03:125,9,0	0/0:161,0:161:99:0,485,6723	0/0:151,0:151:99:0,455,6306	0/0:166,0:166:99:0,500,6932	0/0:171,0:171:99:0,515,7141	0/0:150,0:150:99:0,452,6264	0/0:164,0:164:99:0,494,6849	0/0:162,0:162:99:0,488,6765	0/0:173,0:173:99:0,521,7225	0/0:177,0:177:99:0,533,7392	0/0:161,0:161:99:0,485,6723	0/0:167,0:167:99:0,503,6974	0/0:174,0:174:99:0,524,7266	0/0:70,0:70:99:0,211,2923	0/0:206,0:206:99:0,620,8603
gi|293339394|gb|GU595196.1|	113231	.	A	C	366.26	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.631;DP=2805;Dels=0.00;FS=19.242;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9491;MQ=254.00;MQ0=0;MQRankSum=1.217;QD=33.30;ReadPosRankSum=2.326;SB=-40.30	GT:AD:DP:GQ:PL	0/0:183,0:183:99:0,551,7642	0/0:171,0:171:99:0,515,7141	0/0:99,0:99:99:0,298,4134	0/0:152,0:152:99:0,458,6348	1/1:0,5:5:15.05:209,15,0	1/1:0,3:3:9.03:125,9,0	1/1:0,3:3:9.03:125,9,0	0/0:157,0:157:99:0,473,6556	0/0:151,0:151:99:0,455,6306	0/0:160,0:160:99:0,482,6682	0/0:165,0:165:99:0,497,6890	0/0:149,0:149:99:0,448,6222	0/0:157,0:157:99:0,473,6556	0/0:165,0:165:99:0,497,6890	0/0:169,0:169:99:0,509,7057	0/0:166,0:166:99:0,500,6932	0/0:157,0:157:99:0,473,6556	0/0:152,0:152:99:0,458,6348	0/0:171,0:171:99:0,515,7141	0/0:74,0:74:99:0,223,3090	0/0:196,0:196:99:0,590,8185
gi|293339394|gb|GU595196.1|	113252	.	C	T	4384.85	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.044;DP=2922;Dels=0.00;FS=3.693;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.324;QD=41.76;ReadPosRankSum=-4.013;SB=-2046.03	GT:AD:DP:GQ:PL	0/0:174,0:174:99:0,524,7266	0/0:169,0:169:99:0,509,7057	0/0:87,0:87:99:0,262,3633	0/0:154,0:154:99:0,464,6431	1/1:0,23:23:69.23:960,69,0	1/1:0,20:20:60.20:835,60,0	1/1:0,62:62:99:2589,187,0	0/0:156,0:156:99:0,470,6515	0/0:152,0:152:99:0,458,6348	0/0:177,0:177:99:0,533,7392	0/0:168,0:168:99:0,506,7016	0/0:141,0:141:99:0,424,5888	0/0:162,0:162:99:0,488,6765	0/0:164,0:164:99:0,494,6849	0/0:183,0:183:99:0,551,7642	0/0:176,0:176:99:0,530,7350	0/0:161,0:161:99:0,485,6723	0/0:148,0:148:99:0,445,6181	0/0:174,0:174:99:0,524,7266	0/0:78,0:78:99:0,235,3257	0/0:193,0:193:99:0,581,8060
gi|293339394|gb|GU595196.1|	113258	.	A	T	5261.82	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.293;DP=2914;Dels=0.00;FS=4.403;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=2.227;QD=41.76;ReadPosRankSum=0.989;SB=-2463.86	GT:AD:DP:GQ:PL	0/0:169,0:169:99:0,509,7057	0/0:172,0:172:99:0,518,7183	0/0:88,0:88:99:0,265,3675	0/0:159,0:159:99:0,479,6640	1/1:0,27:27:81.27:1128,81,0	1/1:0,27:27:81.27:1128,81,0	1/1:0,72:72:99:3007,217,0	0/0:166,0:166:99:0,500,6932	0/0:145,0:145:99:0,436,6055	0/0:174,0:174:99:0,524,7266	0/0:158,0:158:99:0,476,6598	0/0:140,0:140:99:0,421,5846	0/0:157,0:157:99:0,473,6556	0/0:158,0:158:99:0,476,6598	0/0:175,0:175:99:0,527,7308	0/0:174,0:174:99:0,524,7266	0/0:160,0:160:99:0,482,6682	0/0:149,0:149:99:0,448,6222	0/0:177,0:177:99:0,533,7392	0/0:76,0:76:99:0,229,3174	0/0:191,0:191:99:0,575,7976
gi|293339394|gb|GU595196.1|	113322	.	C	T	8352.09	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-1.055;DP=3177;Dels=0.00;FS=64.416;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=0.830;QD=41.76;ReadPosRankSum=0.643;SB=-2630.92	GT:AD:DP:GQ:PL	0/0:159,0:159:99:0,479,6640	0/0:150,0:150:99:0,452,6264	0/0:123,0:123:99:0,370,5137	0/0:158,0:158:99:0,476,6598	1/1:0,54:54:99:2255,163,0	1/1:0,59:59:99:2464,178,0	1/1:0,87:87:99:3633,262,0	0/0:161,0:161:99:0,485,6723	0/0:184,0:184:99:0,554,7684	0/0:156,0:156:99:0,470,6515	0/0:197,0:197:99:0,593,8227	0/0:199,0:199:99:0,599,8310	0/0:170,0:170:99:0,512,7099	0/0:161,0:161:99:0,485,6723	0/0:187,0:187:99:0,563,7809	0/0:194,0:194:99:0,584,8102	0/0:162,0:162:99:0,488,6765	0/0:153,0:153:99:0,461,6389	0/0:144,0:144:99:0,433,6013	0/0:90,0:90:99:0,271,3758	0/0:229,0:229:99:0,689,9563
gi|293339394|gb|GU595196.1|	113328	.	C	G	7976.24	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.585;DP=3132;Dels=0.00;FS=101.624;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=1.306;QD=41.76;ReadPosRankSum=0.591;SB=-2046.28	GT:AD:DP:GQ:PL	0/0:154,0:154:99:0,464,6431	0/0:156,0:156:99:0,470,6515	0/0:121,0:121:99:0,364,5053	0/0:157,0:157:99:0,473,6556	1/1:0,43:43:99:1796,129,0	1/1:0,54:54:99:2255,163,0	1/1:0,94:94:99:3925,283,0	0/0:155,0:155:99:0,467,6473	0/0:194,0:194:99:0,584,8102	0/0:155,0:155:99:0,467,6473	0/0:206,0:206:99:0,620,8603	0/0:195,0:195:99:0,587,8143	0/0:159,0:159:99:0,479,6640	0/0:153,0:153:99:0,461,6389	0/0:182,0:182:99:0,548,7600	0/0:199,0:199:99:0,599,8310	0/0:151,0:151:99:0,455,6306	0/0:162,0:162:99:0,488,6765	0/0:138,0:138:99:0,415,5763	0/0:80,0:80:99:0,241,3341	0/0:224,0:224:99:0,674,9354
gi|293339394|gb|GU595196.1|	113382	.	G	A	1023	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.683;DP=2599;Dels=0.00;FS=28.598;HRun=1;HaplotypeScore=2.0950;InbreedingCoeff=0.9987;MQ=254.00;MQ0=0;MQRankSum=-0.256;QD=37.89;ReadPosRankSum=-3.177;SB=-124.51	GT:AD:DP:GQ:PL	0/0:160,0:160:99:0,482,6682	0/0:148,0:148:99:0,445,6181	0/0:106,0:106:99:0,319,4427	0/0:143,0:143:99:0,430,5972	1/1:0,9:9:27.09:376,27,0	1/1:0,8:8:24.08:334,24,0	1/1:0,10:10:30.10:418,30,0	0/0:140,0:140:99:0,421,5846	0/0:145,0:145:99:0,436,6055	0/0:126,0:126:99:0,379,5262	0/0:156,0:156:99:0,470,6515	0/0:142,0:142:99:0,427,5930	0/0:150,0:150:99:0,452,6264	0/0:144,0:144:99:0,433,6013	0/0:166,0:166:99:0,500,6932	0/0:136,0:136:99:0,409,5679	0/0:150,0:150:99:0,452,6264	0/0:164,0:164:99:0,494,6849	0/0:154,0:154:99:0,464,6431	0/0:89,0:89:99:0,268,3717	0/0:153,0:153:99:0,461,6389
gi|293339394|gb|GU595196.1|	113384	.	C	G	6389.35	.	AC=2;AF=0.048;AN=42;BaseQRankSum=-0.241;DP=2578;Dels=0.00;FS=2.148;HRun=3;HaplotypeScore=1.9045;InbreedingCoeff=0.9823;MQ=254.00;MQ0=0;MQRankSum=0.200;QD=41.76;ReadPosRankSum=1.013;SB=-2630.91	GT:AD:DP:GQ:PL	0/0:161,0:161:99:0,485,6723	0/0:147,0:147:99:0,442,6139	0/0:109,0:109:99:0,328,4552	0/0:144,0:144:99:0,433,6013	0/0:9,0:9:27.09:0,27,376	0/0:5,0:5:15.05:0,15,209	0/0:9,0:9:27.09:0,27,376	0/0:135,0:135:99:0,406,5638	0/0:144,0:144:99:0,433,6013	0/0:125,0:125:99:0,376,5220	0/0:151,0:151:99:0,455,6306	0/0:145,0:145:99:0,436,6055	0/0:147,0:147:99:0,442,6139	0/0:146,0:146:99:0,439,6097	0/0:162,0:162:99:0,488,6765	0/0:133,0:133:99:0,400,5554	0/0:153,0:153:99:0,461,6389	0/0:165,0:165:99:0,497,6890	0/0:150,0:150:99:0,452,6264	0/0:85,0:85:99:0,256,3550	1/1:0,153:153:99:6389,461,0
gi|293339394|gb|GU595196.1|	113388	.	A	C	609.40	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.123;DP=2489;Dels=0.00;FS=10.771;HRun=0;HaplotypeScore=1.6188;InbreedingCoeff=0.9839;MQ=254.00;MQ0=0;MQRankSum=0.698;QD=35.85;ReadPosRankSum=-4.092;SB=-121.31	GT:AD:DP:GQ:PL	0/0:152,0:152:99:0,458,6348	0/0:141,0:141:99:0,424,5888	0/0:107,0:107:99:0,322,4468	0/0:140,0:140:99:0,421,5846	1/1:0,6:6:18.06:251,18,0	1/1:0,4:4:12.04:167,12,0	1/1:0,7:7:21.07:292,21,0	0/0:126,0:126:99:0,379,5262	0/0:140,0:140:99:0,421,5846	0/0:118,0:118:99:0,355,4928	0/0:137,0:137:99:0,412,5721	0/0:149,0:149:99:0,448,6222	0/0:140,0:140:99:0,421,5846	0/0:146,0:146:99:0,439,6097	0/0:153,0:153:99:0,461,6389	0/0:129,0:129:99:0,388,5387	0/0:151,0:151:99:0,455,6306	0/0:157,0:157:99:0,473,6556	0/0:149,0:149:99:0,448,6222	0/0:80,0:80:99:0,241,3341	0/0:157,0:157:99:0,473,6556
gi|293339394|gb|GU595196.1|	113397	.	G	A	529.87	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.584;DP=2378;Dels=0.00;FS=27.467;HRun=1;HaplotypeScore=0.0000;InbreedingCoeff=0.9552;MQ=254.00;MQ0=0;MQRankSum=0.770;QD=35.32;ReadPosRankSum=-5.099;SB=-0.02	GT:AD:DP:GQ:PL	0/0:148,0:148:99:0,445,6181	0/0:126,0:126:99:0,379,5262	0/0:100,0:100:99:0,301,4176	0/0:136,0:136:99:0,409,5679	1/1:0,2:2:6.02:84,6,0	1/1:0,6:6:18.06:251,18,0	1/1:0,7:7:21.07:292,21,0	0/0:121,0:121:99:0,364,5053	0/0:135,0:135:99:0,406,5638	0/0:119,0:119:99:0,358,4969	0/0:135,0:135:99:0,406,5638	0/0:147,0:147:99:0,442,6139	0/0:137,0:137:99:0,412,5721	0/0:142,0:142:99:0,427,5930	0/0:152,0:152:99:0,458,6348	0/0:121,0:121:99:0,364,5053	0/0:128,0:128:99:0,385,5345	0/0:149,0:149:99:0,448,6222	0/0:140,0:140:99:0,421,5846	0/0:64,0:64:99:0,193,2673	0/0:163,0:163:99:0,491,6807
gi|293339394|gb|GU595196.1|	113424	.	C	T	2860.02	.	AC=6;AF=0.143;AN=42;BaseQRankSum=0.528;DP=2100;Dels=0.00;FS=96.860;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.577;QD=40.28;ReadPosRankSum=3.724;SB=-0.02	GT:AD:DP:GQ:PL	0/0:114,0:114:99:0,343,4761	0/0:114,0:114:99:0,343,4761	0/0:79,0:79:99:0,238,3299	0/0:120,0:120:99:0,361,5011	1/1:0,15:15:45.15:626,45,0	1/1:0,21:21:63.21:877,63,0	1/1:0,35:35:99:1462,105,0	0/0:99,0:99:99:0,298,4134	0/0:109,0:109:99:0,328,4552	0/0:105,0:105:99:0,316,4385	0/0:100,0:100:99:0,301,4176	0/0:133,0:133:99:0,400,5554	0/0:126,0:126:99:0,379,5262	0/0:122,0:122:99:0,367,5095	0/0:122,0:122:99:0,367,5095	0/0:122,0:122:99:0,367,5095	0/0:110,0:110:99:0,331,4594	0/0:127,0:127:99:0,382,5304	0/0:135,0:135:99:0,406,5638	0/0:46,0:46:99:0,138,1921	0/0:146,0:146:99:0,439,6097
gi|293339394|gb|GU595196.1|	113451	.	C	G	4635.42	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.198;DP=1872;Dels=0.00;FS=86.435;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.666;QD=41.76;ReadPosRankSum=-2.206;SB=-0.02	GT:AD:DP:GQ:PL	0/0:94,0:94:99:0,283,3925	0/0:115,0:115:99:0,346,4802	0/0:61,0:61:99:0,184,2547	0/0:101,0:101:99:0,304,4218	1/1:0,27:27:81.27:1128,81,0	1/1:0,30:30:90.30:1253,90,0	1/1:0,54:54:99:2255,163,0	0/0:95,0:95:99:0,286,3967	0/0:105,0:105:99:0,316,4385	0/0:90,0:90:99:0,271,3758	0/0:87,0:87:99:0,262,3633	0/0:111,0:111:99:0,334,4635	0/0:94,0:94:99:0,283,3925	0/0:85,0:85:99:0,256,3550	0/0:105,0:105:99:0,316,4385	0/0:103,0:103:99:0,310,4301	0/0:93,0:93:99:0,280,3884	0/0:126,0:126:99:0,379,5262	0/0:107,0:107:99:0,322,4468	0/0:52,0:52:99:0,157,2172	0/0:137,0:137:99:0,412,5721
gi|293339394|gb|GU595196.1|	113486	.	G	A	4343.09	.	AC=2;AF=0.048;AN=42;BaseQRankSum=1.207;DP=1651;Dels=0.00;FS=6.358;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=1.0000;MQ=254.00;MQ0=0;MQRankSum=-0.164;QD=41.76;ReadPosRankSum=-2.635;SB=-83.54	GT:AD:DP:GQ:PL	0/0:92,0:92:99:0,277,3842	0/0:83,0:83:99:0,250,3466	0/0:57,0:57:99:0,172,2380	0/0:91,0:91:99:0,274,3800	0/0:22,0:22:66.22:0,66,919	0/0:26,0:26:78.26:0,78,1086	0/0:35,0:35:99:0,105,1462	0/0:96,0:96:99:0,289,4009	0/0:93,0:93:99:0,280,3884	0/0:94,0:94:99:0,283,3925	0/0:82,0:82:99:0,247,3424	0/0:92,0:92:99:0,277,3842	0/0:86,0:86:99:0,259,3591	0/0:76,0:76:99:0,229,3174	0/0:101,0:101:99:0,304,4218	0/0:91,0:91:99:0,274,3800	0/0:74,0:74:99:0,223,3090	0/0:99,0:99:99:0,298,4134	0/0:104,0:104:99:0,313,4343	0/0:53,0:53:99:0,160,2213	1/1:0,104:104:99:4343,313,0
gi|293339394|gb|GU595196.1|	113507	.	T	A	733.02	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.479;DP=1512;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9907;MQ=254.00;MQ0=0;MQRankSum=0.404;QD=36.65;ReadPosRankSum=-5.302;SB=-0.02	GT:AD:DP:GQ:PL	0/0:85,0:85:99:0,256,3550	0/0:71,0:71:99:0,214,2965	0/0:63,0:63:99:0,190,2631	0/0:98,0:98:99:0,295,4093	1/1:0,6:6:18.06:251,18,0	1/1:0,5:5:15.05:209,15,0	1/1:0,9:9:27.09:376,27,0	0/0:89,0:89:99:0,268,3717	0/0:82,0:82:99:0,247,3424	0/0:89,0:89:99:0,268,3717	0/0:79,0:79:99:0,238,3299	0/0:78,0:78:99:0,235,3257	0/0:87,0:87:99:0,262,3633	0/0:84,0:84:99:0,253,3508	0/0:97,0:97:99:0,292,4051	0/0:103,0:103:99:0,310,4301	0/0:72,0:72:99:0,217,3007	0/0:101,0:101:99:0,304,4218	0/0:85,0:85:99:0,256,3550	0/0:49,0:49:99:0,147,2046	0/0:80,0:80:99:0,241,3341
gi|293339394|gb|GU595196.1|	113511	.	G	A	366.26	.	AC=6;AF=0.143;AN=42;BaseQRankSum=-0.551;DP=1495;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;InbreedingCoeff=0.9491;MQ=254.00;MQ0=0;MQRankSum=0.169;QD=33.30;ReadPosRankSum=-4.926;SB=-0.02	GT:AD:DP:GQ:PL	0/0:83,0:83:99:0,250,3466	0/0:70,0:70:99:0,211,2923	0/0:59,0:59:99:0,178,2464	0/0:95,0:95:99:0,286,3967	1/1:0,3:3:9.03:125,9,0	1/1:0,3:3:9.03:125,9,0	1/1:0,5:5:15.05:209,15,0	0/0:86,0:86:99:0,259,3591	0/0:81,0:81:99:0,244,3383	0/0:87,0:87:99:0,262,3633	0/0:85,0:85:99:0,256,3550	0/0:76,0:76:99:0,229,3174	0/0:84,0:84:99:0,253,3508	0/0:90,0:90:99:0,271,3758	0/0:102,0:102:99:0,307,4260	0/0:92,0:92:99:0,277,3842	0/0:77,0:77:99:0,232,3216	0/0:103,0:103:99:0,310,4301	0/0:89,0:89:99:0,268,3717	0/0:47,0:47:99:0,141,1963	0/0:78,0:78:99:0,235,3257